![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 4 years ago
Closed 4 years ago
#4967 closed defect (can't reproduce)
Unknown crash
| Reported by: | Owned by: | pett | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Core | Version: | |
| Keywords: | Cc: | Tom Goddard | |
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description (last modified by )
The following bug report has been submitted:
Platform: macOS-10.16-x86_64-i386-64bit
ChimeraX Version: 1.2.5 (2021-05-24 04:13:57 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Process: ChimeraX [1750]
Path: /private/var/folders/*/ChimeraX-1.2.5.app/Contents/MacOS/ChimeraX
Identifier: edu.ucsf.cgl.ChimeraX
Version: 1.2.5 (1.2.5.0)
Code Type: X86-64 (Translated)
Parent Process: ??? [1]
Responsible: ChimeraX [1750]
User ID: 501
Date/Time: 2021-07-28 10:32:10.857 -0600
OS Version: macOS 11.4 (20F71)
Report Version: 12
Anonymous UUID: 16741D9A-3E1D-526C-BF17-26BEEBFD5D09
Sleep/Wake UUID: 3BE5806C-7FA7-4CFE-9E6A-079316B86361
Time Awake Since Boot: 16000 seconds
Time Since Wake: 2700 seconds
System Integrity Protection: enabled
Crashed Thread: 0 CrBrowserMain Dispatch queue: com.apple.main-thread
Exception Type: EXC_BAD_ACCESS (SIGBUS)
Exception Codes: KERN_MEMORY_ERROR at 0x0000000108f95950
Exception Note: EXC_CORPSE_NOTIFY
Termination Signal: Bus error: 10
Termination Reason: Namespace SIGNAL, Code 0xa
Terminating Process: exc handler [1750]
VM Regions Near 0x108f95950:
Rosetta Generic 108dc6000-108dc7000 [ 4K] rw-/rwx SM=PRV
--> mapped file 108dc7000-108ffe000 [ 2268K] r-x/rwx SM=COW Object_id=16364fcb
mapped file 108ffe000-109038000 [ 232K] rw-/rwx SM=COW Object_id=1638accb
Thread 0 Crashed:: CrBrowserMain Dispatch queue: com.apple.main-thread
0 libsystem_platform.dylib 0x00007fff2036d552 _platform_strlen + 18
1 ??? 0x0000000108f6c667 ???
2 libsystem_platform.dylib 0x00007fff2036fd7d _sigtramp + 29
3 select.cpython-38-darwin.so 000000000000000000 0 + 0
4 com.apple.CoreFoundation 0x00007fff203ed79b __CFRepositionTimerInMode + 135
5 ??? 0x0000600001d600c0 ???
6 ??? 0x0000002100002b80 ???
Thread 1:: com.apple.rosetta.exceptionserver
0 runtime 0x00007ffdffcb9858 0x7ffdffcb8000 + 6232
1 runtime 0x00007ffdffcc3d50 0x7ffdffcb8000 + 48464
2 runtime 0x00007ffdffcc4a20 0x7ffdffcb8000 + 51744
Thread 2:
0 ??? 0x00007ffe942e6ab8 ???
1 libsystem_kernel.dylib 0x00007fff202f7cde __psynch_cvwait + 10
2 ??? 0x000000010aec427b ???
3 libsystem_pthread.dylib 0x00007fff2032a8fc _pthread_start + 224
4 libsystem_pthread.dylib 0x00007fff20326443 thread_start + 15
Thread 3:
0 ??? 0x00007ffe942e6ab8 ???
1 libsystem_kernel.dylib 0x00007fff202f7cde __psynch_cvwait + 10
2 ??? 0x000000010aec427b ???
3 libsystem_pthread.dylib 0x00007fff2032a8fc _pthread_start + 224
4 libsystem_pthread.dylib 0x00007fff20326443 thread_start + 15
Thread 4:
0 ??? 0x00007ffe942e6ab8 ???
1 libsystem_kernel.dylib 0x00007fff202f7cde __psynch_cvwait + 10
2 ??? 0x000000010aec427b ???
3 libsystem_pthread.dylib 0x00007fff2032a8fc _pthread_start + 224
4 libsystem_pthread.dylib 0x00007fff20326443 thread_start + 15
Thread 5:
0 ??? 0x00007ffe942e6ab8 ???
1 libsystem_kernel.dylib 0x00007fff202f7cde __psynch_cvwait + 10
2 ??? 0x000000010aec427b ???
3 libsystem_pthread.dylib 0x00007fff2032a8fc _pthread_start + 224
4 libsystem_pthread.dylib 0x00007fff20326443 thread_start + 15
Thread 6:
0 ??? 0x00007ffe942e6ab8 ???
1 libsystem_kernel.dylib 0x00007fff202f7cde __psynch_cvwait + 10
2 ??? 0x000000010aec427b ???
3 libsystem_pthread.dylib 0x00007fff2032a8fc _pthread_start + 224
4 libsystem_pthread.dylib 0x00007fff20326443 thread_start + 15
Thread 7:
0 ??? 0x00007ffe942e6ab8 ???
1 libsystem_kernel.dylib 0x00007fff202f7cde __psynch_cvwait + 10
2 ??? 0x000000010aec427b ???
3 libsystem_pthread.dylib 0x00007fff2032a8fc _pthread_start + 224
4 libsystem_pthread.dylib 0x00007fff20326443 thread_start + 15
Thread 8:
0 ??? 0x00007ffe942e6ab8 ???
1 libsystem_kernel.dylib 0x00007fff202f7cde __psynch_cvwait + 10
2 ??? 0x000000010aec427b ???
3 libsystem_pthread.dylib 0x00007fff2032a8fc _pthread_start + 224
4 libsystem_pthread.dylib 0x00007fff20326443 thread_start + 15
Thread 9:: ThreadPoolServiceThread
0 ??? 0x00007ffe942e6ab8 ???
1 libsystem_kernel.dylib 0x00007fff202fe1d2 kevent64 + 10
2 ??? 0x000000012ac19cc7 ???
3 ??? 0x000000012aba262b ???
4 ??? 0x000000012ab667cb ???
5 ??? 0x000000012abada94 ???
6 ??? 0x000000012abc1a7d ???
7 ??? 0x000000012ac0ae07 ???
8 libsystem_pthread.dylib 0x00007fff2032a8fc _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff20326443 thread_start + 15
Thread 10:: ThreadPoolBackgroundWorker
0 ??? 0x00007ffe942e6ab8 ???
1 libsystem_kernel.dylib 0x00007fff202f52ba mach_msg_trap + 10
2 ??? 0x000000012ac0f492 ???
3 ??? 0x000000012abb7778 ???
4 ??? 0x000000012abb8150 ???
5 ??? 0x000000012abb7c44 ???
6 ??? 0x000000012ac0ae07 ???
7 libsystem_pthread.dylib 0x00007fff2032a8fc _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff20326443 thread_start + 15
Thread 11:: Chrome_IOThread
0 ??? 0x00007ffe942e6ab8 ???
1 libsystem_kernel.dylib 0x00007fff202fe1d2 kevent64 + 10
2 ??? 0x000000012ac19cc7 ???
3 ??? 0x000000012aba262b ???
4 ??? 0x000000012ab667cb ???
5 ??? 0x000000012eae6f06 ???
6 ??? 0x000000012abc1a7d ???
7 ??? 0x000000012ac0ae07 ???
8 libsystem_pthread.dylib 0x00007fff2032a8fc _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff20326443 thread_start + 15
Thread 12:: NetworkConfigWatcher
0 ??? 0x00007ffe942e6ab8 ???
1 libsystem_kernel.dylib 0x00007fff202f52ba mach_msg_trap + 10
2 ??? 0x000000012ac0f492 ???
3 ??? 0x000000012ac0f2cf ???
4 ??? 0x000000012ab371db ???
5 ??? 0x000000012aba262b ???
6 ??? 0x000000012ab667cb ???
7 ??? 0x000000012abc1a7d ???
8 ??? 0x000000012ac0ae07 ???
9 libsystem_pthread.dylib 0x00007fff2032a8fc _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff20326443 thread_start + 15
Thread 13:: CompositorTileWorker1
0 ??? 0x00007ffe942e6ab8 ???
1 libsystem_kernel.dylib 0x00007fff202f7cde __psynch_cvwait + 10
2 ??? 0x000000012ac06e18 ???
3 ??? 0x000000012bebe5f8 ???
4 ??? 0x000000012ac0ae07 ???
5 libsystem_pthread.dylib 0x00007fff2032a8fc _pthread_start + 224
6 libsystem_pthread.dylib 0x00007fff20326443 thread_start + 15
Thread 14:: Chrome_InProcGpuThread
0 ??? 0x00007ffe942e6ab8 ???
1 libsystem_kernel.dylib 0x00007fff202f52ba mach_msg_trap + 10
2 ??? 0x000000012ac0f492 ???
3 ??? 0x000000012ab3720f ???
4 ??? 0x000000012aba262b ???
5 ??? 0x000000012ab667cb ???
6 ??? 0x000000012abc1a7d ???
7 ??? 0x000000012ac0ae07 ???
8 libsystem_pthread.dylib 0x00007fff2032a8fc _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff20326443 thread_start + 15
Thread 15:: Chrome_ChildIOThread
0 ??? 0x00007ffe942e6ab8 ???
1 libsystem_kernel.dylib 0x00007fff202fe1d2 kevent64 + 10
2 ??? 0x000000012ac19cc7 ???
3 ??? 0x000000012aba262b ???
4 ??? 0x000000012ab667cb ???
5 ??? 0x000000012abc1a7d ???
6 ??? 0x000000012ac0ae07 ???
7 libsystem_pthread.dylib 0x00007fff2032a8fc _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff20326443 thread_start + 15
Thread 16:: VizCompositorThread
0 ??? 0x00007ffe942e6ab8 ???
1 libsystem_kernel.dylib 0x00007fff202f52ba mach_msg_trap + 10
2 ??? 0x000000012ac0f492 ???
3 ??? 0x000000012ac0f2cf ???
4 ??? 0x000000012ab371db ???
5 ??? 0x000000012aba262b ???
6 ??? 0x000000012ab667cb ???
7 ??? 0x000000012abc1a7d ???
8 ??? 0x000000012ac0ae07 ???
9 libsystem_pthread.dylib 0x00007fff2032a8fc _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff20326443 thread_start + 15
Thread 17:: NetworkConfigWatcher
0 ??? 0x00007ffe942e6ab8 ???
1 libsystem_kernel.dylib 0x00007fff202f52ba mach_msg_trap + 10
2 ??? 0x000000012ac0f492 ???
3 ??? 0x000000012ac0f2cf ???
4 ??? 0x000000012ab371db ???
5 ??? 0x000000012aba262b ???
6 ??? 0x000000012ab667cb ???
7 ??? 0x000000012abc1a7d ???
8 ??? 0x000000012ac0ae07 ???
9 libsystem_pthread.dylib 0x00007fff2032a8fc _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff20326443 thread_start + 15
Thread 18:: NetworkConfigWatcher
0 ??? 0x00007ffe942e6ab8 ???
1 libsystem_kernel.dylib 0x00007fff202f52ba mach_msg_trap + 10
2 ??? 0x000000012ac0f492 ???
3 ??? 0x000000012ac0f2cf ???
4 ??? 0x000000012ab371db ???
5 ??? 0x000000012aba262b ???
6 ??? 0x000000012ab667cb ???
7 ??? 0x000000012abc1a7d ???
8 ??? 0x000000012ac0ae07 ???
9 libsystem_pthread.dylib 0x00007fff2032a8fc _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff20326443 thread_start + 15
Thread 19:: ThreadPoolSingleThreadForegroundBlocking0
0 ??? 0x00007ffe942e6ab8 ???
1 libsystem_kernel.dylib 0x00007fff202f52ba mach_msg_trap + 10
2 ??? 0x000000012ac0f492 ???
3 ??? 0x000000012ac0f2cf ???
4 ??? 0x000000012abb776a ???
5 ??? 0x000000012abb8150 ???
6 ??? 0x000000012abb7d34 ???
7 ??? 0x000000012ac0ae07 ???
8 libsystem_pthread.dylib 0x00007fff2032a8fc _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff20326443 thread_start + 15
Thread 20:: MemoryInfra
0 ??? 0x00007ffe942e6ab8 ???
1 libsystem_kernel.dylib 0x00007fff202f52ba mach_msg_trap + 10
2 ??? 0x000000012ac0f492 ???
3 ??? 0x000000012ac0f2cf ???
4 ??? 0x000000012ab371db ???
5 ??? 0x000000012aba262b ???
6 ??? 0x000000012ab667cb ???
7 ??? 0x000000012abc1a7d ???
8 ??? 0x000000012ac0ae07 ???
9 libsystem_pthread.dylib 0x00007fff2032a8fc _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff20326443 thread_start + 15
Thread 21:: NetworkConfigWatcher
0 ??? 0x00007ffe942e6ab8 ???
1 libsystem_kernel.dylib 0x00007fff202f52ba mach_msg_trap + 10
2 ??? 0x000000012ac0f492 ???
3 ??? 0x000000012ac0f2cf ???
4 ??? 0x000000012ab371db ???
5 ??? 0x000000012aba262b ???
6 ??? 0x000000012ab667cb ???
7 ??? 0x000000012abc1a7d ???
8 ??? 0x000000012ac0ae07 ???
9 libsystem_pthread.dylib 0x00007fff2032a8fc _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff20326443 thread_start + 15
Thread 22:: com.apple.NSEventThread
0 ??? 0x00007ffe942e6ab8 ???
1 libsystem_kernel.dylib 0x00007fff202f52ba mach_msg_trap + 10
2 com.apple.CoreFoundation 0x00007fff204238c5 __CFRunLoopServiceMachPort + 316
3 com.apple.CoreFoundation 0x00007fff20421f7b __CFRunLoopRun + 1332
4 com.apple.CoreFoundation 0x00007fff20421380 CFRunLoopRunSpecific + 567
5 ??? 0x00007fff22cd268a ???
6 libsystem_pthread.dylib 0x00007fff2032a8fc _pthread_start + 224
7 libsystem_pthread.dylib 0x00007fff20326443 thread_start + 15
Thread 23:: ThreadPoolSingleThreadSharedBackgroundBlocking1
0 ??? 0x00007ffe942e6ab8 ???
1 libsystem_kernel.dylib 0x00007fff202f52ba mach_msg_trap + 10
2 ??? 0x000000012ac0f492 ???
3 ??? 0x000000012ac0f2cf ???
4 ??? 0x000000012abb776a ???
5 ??? 0x000000012abb7e3d ???
6 ??? 0x000000012abb7c74 ???
7 ??? 0x000000012ac0ae07 ???
8 libsystem_pthread.dylib 0x00007fff2032a8fc _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff20326443 thread_start + 15
Thread 24:: ThreadPoolForegroundWorker
0 ??? 0x00007ffe942e6ab8 ???
1 libsystem_kernel.dylib 0x00007fff202f52ba mach_msg_trap + 10
2 ??? 0x000000012ac0f492 ???
3 ??? 0x000000012abb7778 ???
4 ??? 0x000000012abb8150 ???
5 ??? 0x000000012abb7cd4 ???
6 ??? 0x000000012ac0ae07 ???
7 libsystem_pthread.dylib 0x00007fff2032a8fc _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff20326443 thread_start + 15
Thread 25:
0 runtime 0x00007ffdffd1299c 0x7ffdffcb8000 + 371100
Thread 26:
0 runtime 0x00007ffdffd1299c 0x7ffdffcb8000 + 371100
Thread 27:
0 runtime 0x00007ffdffd1299c 0x7ffdffcb8000 + 371100
Thread 28:
0 runtime 0x00007ffdffd1299c 0x7ffdffcb8000 + 371100
Thread 29:
0 runtime 0x00007ffdffd1299c 0x7ffdffcb8000 + 371100
Thread 30:
0 runtime 0x00007ffdffd1299c 0x7ffdffcb8000 + 371100
Thread 31:
0 runtime 0x00007ffdffd1299c 0x7ffdffcb8000 + 371100
Thread 32:
0 runtime 0x00007ffdffd1299c 0x7ffdffcb8000 + 371100
Thread 33:
0 runtime 0x00007ffdffd1299c 0x7ffdffcb8000 + 371100
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0xffffffffffffffff rbx: 0x0000000109036620 rcx: 0x0000000108f9595c rdx: 0x0000000108f9595c
rdi: 0x0000000108f95950 rsi: 0x0000000108f8acc3 rbp: 0x00007fe6e0047fa0 rsp: 0x00007fe6e0047fa0
r8: 0x000000014d2f3088 r9: 0x5efc2610ff856f57 r10: 0x0000000200c97eac r11: 0x00007fff203e2694
r12: 0x0000000000000002 r13: 0x000000000000000a r14: 0x000000000000000d r15: 0x0000000108f9595c
rip: 0x00007fff2036d552 rfl: 0x0000000000000202
Binary Images:
0 - 0xffffffffffffffff +select.cpython-38-darwin.so (???) /private/var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/select.cpython-38-darwin.so
0x200bc0000 - 0x200c5bfff dyld (852) /usr/lib/dyld
0x7ffdffcb8000 - 0x7ffdffd2bfff +runtime (203.46) /Library/Apple/*/runtime
0x7fff20062000 - 0x7fff20063fff libsystem_blocks.dylib (79) /usr/lib/system/libsystem_blocks.dylib
0x7fff20064000 - 0x7fff20099fff libxpc.dylib (2038.120.1) /usr/lib/system/libxpc.dylib
0x7fff2009a000 - 0x7fff200b1fff libsystem_trace.dylib (1277.120.1) /usr/lib/system/libsystem_trace.dylib
0x7fff200b2000 - 0x7fff2014ffff libcorecrypto.dylib (1000.120.2) /usr/lib/system/libcorecrypto.dylib
0x7fff20150000 - 0x7fff2017cfff libsystem_malloc.dylib (317.121.1) /usr/lib/system/libsystem_malloc.dylib
0x7fff2017d000 - 0x7fff201c1fff libdispatch.dylib (1271.120.2) /usr/lib/system/libdispatch.dylib
0x7fff201c2000 - 0x7fff201fbfff libobjc.A.dylib (824) /usr/lib/libobjc.A.dylib
0x7fff201fc000 - 0x7fff201fefff libsystem_featureflags.dylib (28.60.1) /usr/lib/system/libsystem_featureflags.dylib
0x7fff201ff000 - 0x7fff20287fff libsystem_c.dylib (1439.100.3) /usr/lib/system/libsystem_c.dylib
0x7fff20288000 - 0x7fff202ddfff libc++.1.dylib (905.6) /usr/lib/libc++.1.dylib
0x7fff202de000 - 0x7fff202f3fff libc++abi.dylib (905.6) /usr/lib/libc++abi.dylib
0x7fff202f4000 - 0x7fff20323fff libsystem_kernel.dylib (7195.121.3) /usr/lib/system/libsystem_kernel.dylib
0x7fff20324000 - 0x7fff2032ffff libsystem_pthread.dylib (454.120.2) /usr/lib/system/libsystem_pthread.dylib
0x7fff20330000 - 0x7fff2036bfff libdyld.dylib (852) /usr/lib/system/libdyld.dylib
0x7fff2036c000 - 0x7fff20375fff libsystem_platform.dylib (254.80.2) /usr/lib/system/libsystem_platform.dylib
0x7fff20376000 - 0x7fff203a1fff libsystem_info.dylib (542.40.3) /usr/lib/system/libsystem_info.dylib
0x7fff203a2000 - 0x7fff2083ffff com.apple.CoreFoundation (6.9 - 1776.103) /System/Library/Frameworks/CoreFoundation.framework/Versions/A/CoreFoundation
0x7fff22435000 - 0x7fff22694fff libicucore.A.dylib (66112) /usr/lib/libicucore.A.dylib
0x7fff22695000 - 0x7fff2269efff libsystem_darwin.dylib (1439.100.3) /usr/lib/system/libsystem_darwin.dylib
0x7fff22ab4000 - 0x7fff22abffff libsystem_notify.dylib (279.40.4) /usr/lib/system/libsystem_notify.dylib
0x7fff24a49000 - 0x7fff24a57fff libsystem_networkextension.dylib (1295.120.5) /usr/lib/system/libsystem_networkextension.dylib
0x7fff24ab6000 - 0x7fff24accfff libsystem_asl.dylib (385) /usr/lib/system/libsystem_asl.dylib
0x7fff261c5000 - 0x7fff261ccfff libsystem_symptoms.dylib (1431.120.1) /usr/lib/system/libsystem_symptoms.dylib
0x7fff284d7000 - 0x7fff284e7fff libsystem_containermanager.dylib (318.100.4) /usr/lib/system/libsystem_containermanager.dylib
0x7fff291f3000 - 0x7fff291f6fff libsystem_configuration.dylib (1109.120.1) /usr/lib/system/libsystem_configuration.dylib
0x7fff291f7000 - 0x7fff291fbfff libsystem_sandbox.dylib (1441.120.5) /usr/lib/system/libsystem_sandbox.dylib
0x7fff29dfb000 - 0x7fff29dfdfff libquarantine.dylib (119.40.2) /usr/lib/system/libquarantine.dylib
0x7fff2a399000 - 0x7fff2a3a5fff libbz2.1.0.dylib (44) /usr/lib/libbz2.1.0.dylib
0x7fff2a3a6000 - 0x7fff2a3aafff libsystem_coreservices.dylib (127.1) /usr/lib/system/libsystem_coreservices.dylib
0x7fff2a5a7000 - 0x7fff2a5b9fff libz.1.dylib (76) /usr/lib/libz.1.dylib
0x7fff2a5ba000 - 0x7fff2a605fff libsystem_m.dylib (3186.100.3) /usr/lib/system/libsystem_m.dylib
0x7fff2a607000 - 0x7fff2a60cfff libmacho.dylib (980) /usr/lib/system/libmacho.dylib
0x7fff2a629000 - 0x7fff2a634fff libcommonCrypto.dylib (60178.120.3) /usr/lib/system/libcommonCrypto.dylib
0x7fff2a635000 - 0x7fff2a63ffff libunwind.dylib (201) /usr/lib/system/libunwind.dylib
0x7fff2a640000 - 0x7fff2a647fff liboah.dylib (203.46) /usr/lib/liboah.dylib
0x7fff2a648000 - 0x7fff2a652fff libcopyfile.dylib (173.40.2) /usr/lib/system/libcopyfile.dylib
0x7fff2a653000 - 0x7fff2a65afff libcompiler_rt.dylib (102.2) /usr/lib/system/libcompiler_rt.dylib
0x7fff2a65b000 - 0x7fff2a65dfff libsystem_collections.dylib (1439.100.3) /usr/lib/system/libsystem_collections.dylib
0x7fff2a65e000 - 0x7fff2a660fff libsystem_secinit.dylib (87.60.1) /usr/lib/system/libsystem_secinit.dylib
0x7fff2a661000 - 0x7fff2a663fff libremovefile.dylib (49.120.1) /usr/lib/system/libremovefile.dylib
0x7fff2a664000 - 0x7fff2a664fff libkeymgr.dylib (31) /usr/lib/system/libkeymgr.dylib
0x7fff2a665000 - 0x7fff2a66cfff libsystem_dnssd.dylib (1310.120.71) /usr/lib/system/libsystem_dnssd.dylib
0x7fff2a66d000 - 0x7fff2a672fff libcache.dylib (83) /usr/lib/system/libcache.dylib
0x7fff2a673000 - 0x7fff2a674fff libSystem.B.dylib (1292.120.1) /usr/lib/libSystem.B.dylib
0x7fff2a675000 - 0x7fff2a678fff libfakelink.dylib (3) /usr/lib/libfakelink.dylib
0x7fff2a679000 - 0x7fff2a679fff com.apple.SoftLinking (1.0 - 1) /System/Library/PrivateFrameworks/SoftLinking.framework/Versions/A/SoftLinking
0x7fff2dbcf000 - 0x7fff2dbcffff liblaunch.dylib (2038.120.1) /usr/lib/system/liblaunch.dylib
0x7fff3005e000 - 0x7fff3005efff libsystem_product_info_filter.dylib (8.40.1) /usr/lib/system/libsystem_product_info_filter.dylib
Translated Code Information:
tmp0: 0x00007ffe946fb4e4 tmp1: 0x00000001093d5e40 tmp2: 0x00007fff2036d540
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=518.8M resident=0K(0%) swapped_out_or_unallocated=518.8M(100%)
Writable regions: Total=2.2G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=2.2G(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 384K 3
Activity Tracing 256K 1
CG backing stores 5088K 6
CG image 44K 5
CoreAnimation 80K 11
CoreGraphics 12K 2
CoreUI image data 1916K 15
Foundation 16K 1
Kernel Alloc Once 1384K 5
MALLOC 416.1M 78
MALLOC guard page 192K 8
MALLOC_MEDIUM (reserved) 880.0M 8 reserved VM address space (unallocated)
MALLOC_NANO (reserved) 384.0M 1 reserved VM address space (unallocated)
Mach message 24K 6
OpenGL GLSL 384K 5
Rosetta Arena 2048K 1
Rosetta Generic 1592K 395
Rosetta IndirectBranch 1024K 1
Rosetta JIT 128.0M 1
Rosetta Return Stack 660K 66
Rosetta Thread Context 660K 66
STACK GUARD 36K 9
Stack 136.6M 33
Stack Guard 56.1M 24
VM_ALLOCATE 101.0M 173
VM_ALLOCATE (reserved) 160.1M 16 reserved VM address space (unallocated)
__DATA 500K 50
__DATA_CONST 2984K 40
__DATA_DIRTY 95K 24
__LINKEDIT 506.4M 5
__OBJC_RO 70.2M 1
__OBJC_RW 2480K 2
__TEXT 12.5M 50
__UNICODE 588K 1
dylib 2088K 23
dylib (reserved) 92K 7 reserved VM address space (unallocated)
mapped file 5.3G 933
shared memory 3280K 33
unshared pmap 10.5M 6
=========== ======= =======
TOTAL 8.1G 2115
TOTAL, minus reserved VM space 6.7G 2115
Log:
UCSF ChimeraX version: 1.2.5 (2021-05-24)
© 2016-2021 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 Metal - 71.6.4
OpenGL renderer: Apple M1
OpenGL vendor: AppleHardware:
Hardware Overview:
Model Name: iMac
Model Identifier: iMac21,1
Processor Name: Unknown
Processor Speed: 2.4 GHz
Number of Processors: 1
Total Number of Cores: 8
L2 Cache (per Core): 4 MB
Memory: 16 GB
Software:
System Software Overview:
System Version: macOS 11.4 (20F71)
Kernel Version: Darwin 20.5.0
Time since boot: 11 minutes
Graphics/Displays:
Apple M1:
Chipset Model: Apple M1
Type: GPU
Bus: Built-In
Total Number of Cores: 8
Vendor: Apple (0x106b)
Metal Family: Supported, Metal GPUFamily Apple 7
Displays:
iMac:
Display Type: Built-In Retina LCD
Resolution: Retina 4.5K (4480 x 2520)
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: No
Connection Type: Internal
Locale: (None, 'UTF-8')
PyQt5 5.15.2, Qt 5.15.2
Installed Packages:
alabaster: 0.7.12
appdirs: 1.4.4
appnope: 0.1.2
Babel: 2.9.1
backcall: 0.2.0
blockdiag: 2.0.1
certifi: 2020.12.5
cftime: 1.5.0
chardet: 3.0.4
ChimeraX-AddCharge: 1.0.1
ChimeraX-AddH: 2.1.6
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.1
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.13.2
ChimeraX-AtomicLibrary: 3.1.3
ChimeraX-AtomSearch: 2.0
ChimeraX-AtomSearchLibrary: 1.0
ChimeraX-AxesPlanes: 2.0
ChimeraX-BasicActions: 1.1
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 1.1
ChimeraX-BondRot: 2.0
ChimeraX-BugReporter: 1.0
ChimeraX-BuildStructure: 2.5.2
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.1
ChimeraX-ButtonPanel: 1.0
ChimeraX-CageBuilder: 1.0
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.1
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.1
ChimeraX-ColorActions: 1.0
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.2.1
ChimeraX-CommandLine: 1.1.4
ChimeraX-ConnectStructure: 2.0
ChimeraX-Contacts: 1.0
ChimeraX-Core: 1.2.5
ChimeraX-CoreFormats: 1.0
ChimeraX-coulombic: 1.1.1
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0
ChimeraX-DataFormats: 1.1
ChimeraX-Dicom: 1.0
ChimeraX-DistMonitor: 1.1.3
ChimeraX-DistUI: 1.0
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0
ChimeraX-FunctionKey: 1.0
ChimeraX-Geometry: 1.1
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.0
ChimeraX-Hbonds: 2.1
ChimeraX-Help: 1.1
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.0
ChimeraX-ImageFormats: 1.1
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-Label: 1.0
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.2
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.1
ChimeraX-Map: 1.0.2
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.0
ChimeraX-Markers: 1.0
ChimeraX-Mask: 1.0
ChimeraX-MatchMaker: 1.2.1
ChimeraX-MDcrds: 2.2
ChimeraX-MedicalToolbar: 1.0.1
ChimeraX-Meeting: 1.0
ChimeraX-MLP: 1.1
ChimeraX-mmCIF: 2.3
ChimeraX-MMTF: 2.1
ChimeraX-Modeller: 1.0.1
ChimeraX-ModelPanel: 1.0.1
ChimeraX-ModelSeries: 1.0
ChimeraX-Mol2: 2.0
ChimeraX-Morph: 1.0
ChimeraX-MouseModes: 1.1
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0.1
ChimeraX-OpenCommand: 1.5
ChimeraX-PDB: 2.4.1
ChimeraX-PDBBio: 1.0
ChimeraX-PDBLibrary: 1.0.1
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.0.1
ChimeraX-PubChem: 2.0.1
ChimeraX-ReadPbonds: 1.0
ChimeraX-Registration: 1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-ResidueFit: 1.0
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.4
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SeqView: 2.3
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0
ChimeraX-Shortcuts: 1.0
ChimeraX-ShowAttr: 1.0
ChimeraX-ShowSequences: 1.0
ChimeraX-SideView: 1.0
ChimeraX-Smiles: 2.0.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.3.1
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-Struts: 1.0
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0
ChimeraX-SwapRes: 2.1
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.0.1
ChimeraX-ToolshedUtils: 1.2
ChimeraX-Tug: 1.0
ChimeraX-UI: 1.7.6
ChimeraX-uniprot: 2.1
ChimeraX-UnitCell: 1.0
ChimeraX-ViewDockX: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0
ChimeraX-WebServices: 1.0
ChimeraX-Zone: 1.0
colorama: 0.4.3
comtypes: 1.1.7
cxservices: 1.0
cycler: 0.10.0
Cython: 0.29.21
decorator: 5.0.9
distlib: 0.3.1
docutils: 0.16
filelock: 3.0.12
funcparserlib: 0.3.6
grako: 3.16.5
h5py: 2.10.0
html2text: 2020.1.16
idna: 2.10
ihm: 0.17
imagecodecs: 2020.5.30
imagesize: 1.2.0
ipykernel: 5.3.4
ipython: 7.18.1
ipython-genutils: 0.2.0
jedi: 0.17.2
Jinja2: 2.11.2
jupyter-client: 6.1.7
jupyter-core: 4.7.1
kiwisolver: 1.3.1
line-profiler: 2.1.2
lxml: 4.6.2
lz4: 3.1.0
MarkupSafe: 2.0.1
matplotlib: 3.3.2
matplotlib-inline: 0.1.2
msgpack: 1.0.0
netCDF4: 1.5.4
networkx: 2.5
numexpr: 2.7.3
numpy: 1.19.2
numpydoc: 1.1.0
openvr: 1.14.1501
packaging: 20.9
ParmEd: 3.2.0
parso: 0.7.1
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 7.2.0
pip: 21.0.1
pkginfo: 1.5.0.1
prompt-toolkit: 3.0.18
psutil: 5.7.2
ptyprocess: 0.7.0
pycollada: 0.7.1
pydicom: 2.0.0
Pygments: 2.7.1
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 2.4.7
PyQt5-commercial: 5.15.2
PyQt5-sip: 12.8.1
PyQtWebEngine-commercial: 5.15.2
python-dateutil: 2.8.1
pytz: 2021.1
pyzmq: 22.0.3
qtconsole: 4.7.7
QtPy: 1.9.0
RandomWords: 0.3.0
requests: 2.24.0
scipy: 1.5.2
setuptools: 50.3.2
sfftk-rw: 0.6.7.dev1
six: 1.15.0
snowballstemmer: 2.1.0
sortedcontainers: 2.2.2
Sphinx: 3.2.1
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 2.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 2.0.0
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.5
suds-jurko: 0.6
tables: 3.6.1
tifffile: 2020.9.3
tinyarray: 1.2.3
tornado: 6.1
traitlets: 5.0.5
urllib3: 1.25.11
wcwidth: 0.2.5
webcolors: 1.11.1
wheel: 0.36.0
wheel-filename: 1.3.0
Change History (2)
comment:1 by , 4 years ago
| Cc: | added |
|---|---|
| Component: | Unassigned → Core |
| Description: | modified (diff) |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → accepted |
| Summary: | ChimeraX bug report submission → Unknown crash |
comment:2 by , 4 years ago
| Resolution: | → can't reproduce |
|---|---|
| Status: | accepted → closed |
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