The following bug report has been submitted:
Platform: Darwin-19.6.0-x86_64-i386-64bit
ChimeraX Version: 1.1.1 (2020-10-07 08:32:49 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Process: ChimeraX [36881]
Path: /Applications/ChimeraX-1.1.1.app/Contents/MacOS/ChimeraX
Identifier: edu.ucsf.cgl.ChimeraX
Version: 1.1.1 (1.1.1.0)
Code Type: X86-64 (Native)
Parent Process: ??? [1]
Responsible: ChimeraX [36881]
User ID: 559435
Date/Time: 2021-05-19 18:09:50.880 +0200
OS Version: Mac OS X 10.15.7 (19H1030)
Report Version: 12
Anonymous UUID: 2450707F-DAB0-F8E3-46BB-0EDEA211089F
Time Awake Since Boot: 1900000 seconds
System Integrity Protection: enabled
Crashed Thread: 0 CrBrowserMain Dispatch queue: com.apple.main-thread
Exception Type: EXC_CRASH (SIGABRT)
Exception Codes: 0x0000000000000000, 0x0000000000000000
Exception Note: EXC_CORPSE_NOTIFY
Application Specific Information:
abort() called
Application Specific Signatures:
Graphics kernel error: 0xfffffff9
Thread 0 Crashed:: CrBrowserMain Dispatch queue: com.apple.main-thread
0 libsystem_kernel.dylib 0x00007fff6993133a __pthread_kill + 10
1 libsystem_pthread.dylib 0x00007fff699ede60 pthread_kill + 430
2 libsystem_c.dylib 0x00007fff6984893e raise + 26
3 libsystem_platform.dylib 0x00007fff699e25fd _sigtramp + 29
4 ??? 000000000000000000 0 + 0
5 libsystem_c.dylib 0x00007fff698b8808 abort + 120
6 libGPUSupportMercury.dylib 0x00007fff50bc20a5 gpusGenerateCrashLog.cold.1 + 95
7 libGPUSupportMercury.dylib 0x00007fff50bb918f gpusGenerateCrashLog + 89
8 com.apple.AMDRadeonX4000GLDriver 0x000000011ecbfcd1 gpusKillClientExt + 9
9 libGPUSupportMercury.dylib 0x00007fff50bba55b gpusSubmitDataBuffers + 164
10 com.apple.AMDRadeonX4000GLDriver 0x000000011ec9a857 glrATI_Hwl_SubmitPacketsWithToken + 91
11 com.apple.AMDRadeonX4000GLDriver 0x000000011ecf2512 gldPresentFramebufferData + 83
12 GLEngine 0x00007fff3a41e8d1 glSwap_Exec + 97
13 com.apple.opengl 0x00007fff3a400473 CGLFlushDrawable + 59
14 com.apple.AppKit 0x00007fff2cefd75a -[NSOpenGLContext flushBuffer] + 20
15 libqcocoa.dylib 0x000000011d203d3d 0x11d1ad000 + 355645
16 QtGui 0x0000000112d17a6c QOpenGLContext::swapBuffers(QSurface*) + 412
17 QtGui.so 0x000000011578e59f meth_QOpenGLContext_swapBuffers(_object*, _object*) + 95
18 org.python.python 0x0000000101664382 _PyMethodDef_RawFastCallKeywords + 226
19 org.python.python 0x00000001016638b9 _PyCFunction_FastCallKeywords + 41
20 org.python.python 0x0000000101738b60 call_function + 656
21 org.python.python 0x0000000101735817 _PyEval_EvalFrameDefault + 26567
22 org.python.python 0x0000000101739a2c _PyEval_EvalCodeWithName + 3276
23 org.python.python 0x0000000101663879 _PyFunction_FastCallKeywords + 217
24 org.python.python 0x0000000101738bd4 call_function + 772
25 org.python.python 0x00000001017357fa _PyEval_EvalFrameDefault + 26538
26 org.python.python 0x0000000101663d61 function_code_fastcall + 177
27 org.python.python 0x0000000101738bd4 call_function + 772
28 org.python.python 0x00000001017357fa _PyEval_EvalFrameDefault + 26538
29 org.python.python 0x0000000101739a2c _PyEval_EvalCodeWithName + 3276
30 org.python.python 0x0000000101663879 _PyFunction_FastCallKeywords + 217
31 org.python.python 0x0000000101738bd4 call_function + 772
32 org.python.python 0x000000010172f5c4 _PyEval_EvalFrameDefault + 1396
33 org.python.python 0x0000000101663d61 function_code_fastcall + 177
34 org.python.python 0x0000000101738bd4 call_function + 772
35 org.python.python 0x00000001017357fa _PyEval_EvalFrameDefault + 26538
36 org.python.python 0x0000000101663d61 function_code_fastcall + 177
37 org.python.python 0x0000000101738bd4 call_function + 772
38 org.python.python 0x00000001017357fa _PyEval_EvalFrameDefault + 26538
39 org.python.python 0x0000000101663d61 function_code_fastcall + 177
40 org.python.python 0x0000000101738bd4 call_function + 772
41 org.python.python 0x00000001017358ae _PyEval_EvalFrameDefault + 26718
42 org.python.python 0x0000000101663d61 function_code_fastcall + 177
43 org.python.python 0x0000000101738bd4 call_function + 772
44 org.python.python 0x00000001017358ae _PyEval_EvalFrameDefault + 26718
45 org.python.python 0x0000000101739a2c _PyEval_EvalCodeWithName + 3276
46 org.python.python 0x0000000101663879 _PyFunction_FastCallKeywords + 217
47 org.python.python 0x0000000101738bd4 call_function + 772
48 org.python.python 0x0000000101735817 _PyEval_EvalFrameDefault + 26567
49 org.python.python 0x0000000101739a2c _PyEval_EvalCodeWithName + 3276
50 org.python.python 0x0000000101663377 _PyFunction_FastCallDict + 455
51 org.python.python 0x0000000101664873 _PyObject_Call_Prepend + 131
52 org.python.python 0x00000001016639d8 PyObject_Call + 136
53 sip.so 0x0000000115352f7a call_method + 76
54 sip.so 0x000000011534ed07 sip_api_call_procedure_method + 152
55 QtWidgets.so 0x00000001122399d7 sipQGraphicsView::mouseMoveEvent(QMouseEvent*) + 103
56 QtWidgets 0x00000001127373e7 QWidget::event(QEvent*) + 487
57 QtWidgets 0x00000001127df21d QFrame::event(QEvent*) + 45
58 QtWidgets 0x0000000112a54ef7 QGraphicsView::viewportEvent(QEvent*) + 1191
59 QtWidgets.so 0x000000011223ae50 sipQGraphicsView::viewportEvent(QEvent*) + 192
60 QtCore 0x00000001133e75d4 QCoreApplicationPrivate::sendThroughObjectEventFilters(QObject*, QEvent*) + 148
61 QtWidgets 0x00000001126fb668 QApplicationPrivate::notify_helper(QObject*, QEvent*) + 248
62 QtWidgets 0x00000001126fe4d8 QApplication::notify(QObject*, QEvent*) + 7336
63 QtWidgets.so 0x00000001122bb3ca sipQApplication::notify(QObject*, QEvent*) + 234
64 QtCore 0x00000001133e7324 QCoreApplication::notifyInternal2(QObject*, QEvent*) + 212
65 QtWidgets 0x00000001126fbfa0 QApplicationPrivate::sendMouseEvent(QWidget*, QMouseEvent*, QWidget*, QWidget*, QWidget**, QPointer&, bool, bool) + 896
66 QtWidgets 0x000000011275690e 0x1126eb000 + 440590
67 QtWidgets 0x00000001127555c9 0x1126eb000 + 435657
68 QtWidgets 0x00000001126fb67d QApplicationPrivate::notify_helper(QObject*, QEvent*) + 269
69 QtWidgets 0x00000001126fca82 QApplication::notify(QObject*, QEvent*) + 594
70 QtWidgets.so 0x00000001122bb3ca sipQApplication::notify(QObject*, QEvent*) + 234
71 QtCore 0x00000001133e7324 QCoreApplication::notifyInternal2(QObject*, QEvent*) + 212
72 QtGui 0x0000000112cd0779 QGuiApplicationPrivate::processMouseEvent(QWindowSystemInterfacePrivate::MouseEvent*) + 3961
73 QtGui 0x0000000112cb746b QWindowSystemInterface::sendWindowSystemEvents(QFlags) + 219
74 libqcocoa.dylib 0x000000011d1e3900 0x11d1ad000 + 223488
75 libqcocoa.dylib 0x000000011d1e4068 0x11d1ad000 + 225384
76 com.apple.CoreFoundation 0x00007fff2f8e2832 __CFRUNLOOP_IS_CALLING_OUT_TO_A_SOURCE0_PERFORM_FUNCTION__ + 17
77 com.apple.CoreFoundation 0x00007fff2f8e27d1 __CFRunLoopDoSource0 + 103
78 com.apple.CoreFoundation 0x00007fff2f8e25eb __CFRunLoopDoSources0 + 209
79 com.apple.CoreFoundation 0x00007fff2f8e131a __CFRunLoopRun + 927
80 com.apple.CoreFoundation 0x00007fff2f8e091e CFRunLoopRunSpecific + 462
81 com.apple.HIToolbox 0x00007fff2e50cabd RunCurrentEventLoopInMode + 292
82 com.apple.HIToolbox 0x00007fff2e50c6f4 ReceiveNextEventCommon + 359
83 com.apple.HIToolbox 0x00007fff2e50c579 _BlockUntilNextEventMatchingListInModeWithFilter + 64
84 com.apple.AppKit 0x00007fff2cb53039 _DPSNextEvent + 883
85 com.apple.AppKit 0x00007fff2cb51880 -[NSApplication(NSEvent) _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 1352
86 com.apple.AppKit 0x00007fff2cb4358e -[NSApplication run] + 658
87 libqcocoa.dylib 0x000000011d1e2de3 0x11d1ad000 + 220643
88 QtCore 0x00000001133e293f QEventLoop::exec(QFlags) + 431
89 QtCore 0x00000001133e7932 QCoreApplication::exec() + 130
90 QtWidgets.so 0x00000001123aa7d2 meth_QApplication_exec_(_object*, _object*) + 82
91 org.python.python 0x0000000101664382 _PyMethodDef_RawFastCallKeywords + 226
92 org.python.python 0x00000001016638b9 _PyCFunction_FastCallKeywords + 41
93 org.python.python 0x0000000101738b60 call_function + 656
94 org.python.python 0x0000000101735817 _PyEval_EvalFrameDefault + 26567
95 org.python.python 0x0000000101663d61 function_code_fastcall + 177
96 org.python.python 0x0000000101738bd4 call_function + 772
97 org.python.python 0x0000000101735817 _PyEval_EvalFrameDefault + 26567
98 org.python.python 0x0000000101739a2c _PyEval_EvalCodeWithName + 3276
99 org.python.python 0x0000000101663879 _PyFunction_FastCallKeywords + 217
100 org.python.python 0x0000000101738bd4 call_function + 772
101 org.python.python 0x00000001017358ae _PyEval_EvalFrameDefault + 26718
102 org.python.python 0x0000000101739a2c _PyEval_EvalCodeWithName + 3276
103 org.python.python 0x000000010172efb0 PyEval_EvalCode + 48
104 org.python.python 0x000000010172c547 builtin_exec + 583
105 org.python.python 0x000000010166452d _PyMethodDef_RawFastCallKeywords + 653
106 org.python.python 0x00000001016638b9 _PyCFunction_FastCallKeywords + 41
107 org.python.python 0x0000000101738b60 call_function + 656
108 org.python.python 0x00000001017358ae _PyEval_EvalFrameDefault + 26718
109 org.python.python 0x0000000101739a2c _PyEval_EvalCodeWithName + 3276
110 org.python.python 0x0000000101663879 _PyFunction_FastCallKeywords + 217
111 org.python.python 0x0000000101738bd4 call_function + 772
112 org.python.python 0x00000001017358ae _PyEval_EvalFrameDefault + 26718
113 org.python.python 0x0000000101739a2c _PyEval_EvalCodeWithName + 3276
114 org.python.python 0x0000000101663377 _PyFunction_FastCallDict + 455
115 org.python.python 0x0000000101793af3 pymain_run_module + 147
116 org.python.python 0x0000000101792bdc pymain_main + 5900
117 org.python.python 0x00000001017914c3 Py_Main + 51
118 edu.ucsf.cgl.ChimeraX 0x0000000101635dc8 main + 120
119 libdyld.dylib 0x00007fff697e9cc9 start + 1
Thread 1:
0 libsystem_kernel.dylib 0x00007fff6992d882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff699ee425 _pthread_cond_wait + 698
2 libopenblasp-r0.3.7.dylib 0x0000000102f54c3b blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff699ee109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff699e9b8b thread_start + 15
Thread 2:
0 libsystem_kernel.dylib 0x00007fff6992d882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff699ee425 _pthread_cond_wait + 698
2 libopenblasp-r0.3.7.dylib 0x0000000102f54c3b blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff699ee109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff699e9b8b thread_start + 15
Thread 3:
0 libsystem_kernel.dylib 0x00007fff6992d882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff699ee425 _pthread_cond_wait + 698
2 libopenblasp-r0.3.7.dylib 0x0000000102f54c3b blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff699ee109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff699e9b8b thread_start + 15
Thread 4:
0 libsystem_kernel.dylib 0x00007fff6992d882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff699ee425 _pthread_cond_wait + 698
2 libopenblasp-r0.3.7.dylib 0x0000000102f54c3b blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff699ee109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff699e9b8b thread_start + 15
Thread 5:
0 libsystem_kernel.dylib 0x00007fff6992d882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff699ee425 _pthread_cond_wait + 698
2 libopenblasp-r0.3.7.dylib 0x0000000102f54c3b blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff699ee109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff699e9b8b thread_start + 15
Thread 6:: com.apple.NSEventThread
0 libsystem_kernel.dylib 0x00007fff6992adfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6992b170 mach_msg + 60
2 com.apple.CoreFoundation 0x00007fff2f8e29d5 __CFRunLoopServiceMachPort + 247
3 com.apple.CoreFoundation 0x00007fff2f8e14a2 __CFRunLoopRun + 1319
4 com.apple.CoreFoundation 0x00007fff2f8e091e CFRunLoopRunSpecific + 462
5 com.apple.AppKit 0x00007fff2ccf4954 _NSEventThread + 132
6 libsystem_pthread.dylib 0x00007fff699ee109 _pthread_start + 148
7 libsystem_pthread.dylib 0x00007fff699e9b8b thread_start + 15
Thread 7:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff6992adfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6992b170 mach_msg + 60
2 QtWebEngineCore 0x0000000117d5f32d 0x115bbd000 + 35267373
3 QtWebEngineCore 0x0000000117d5f22f 0x115bbd000 + 35267119
4 QtWebEngineCore 0x0000000117d1305d 0x115bbd000 + 34955357
5 QtWebEngineCore 0x0000000117d3c085 0x115bbd000 + 35123333
6 QtWebEngineCore 0x0000000117d8e9bc 0x115bbd000 + 35461564
7 QtWebEngineCore 0x0000000117dce717 0x115bbd000 + 35723031
8 libsystem_pthread.dylib 0x00007fff699ee109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff699e9b8b thread_start + 15
Thread 8:: DnsConfigService
0 libsystem_kernel.dylib 0x00007fff6992f766 kevent + 10
1 QtWebEngineCore 0x00000001180209a9 0x115bbd000 + 38156713
2 QtWebEngineCore 0x000000011801dcbd 0x115bbd000 + 38145213
3 QtWebEngineCore 0x0000000117dd4cdc 0x115bbd000 + 35749084
4 QtWebEngineCore 0x0000000117d3c085 0x115bbd000 + 35123333
5 QtWebEngineCore 0x0000000117d8e9bc 0x115bbd000 + 35461564
6 QtWebEngineCore 0x0000000117dce717 0x115bbd000 + 35723031
7 libsystem_pthread.dylib 0x00007fff699ee109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff699e9b8b thread_start + 15
Thread 9:: TaskSchedulerServiceThread
0 libsystem_kernel.dylib 0x00007fff6992f766 kevent + 10
1 QtWebEngineCore 0x00000001180209a9 0x115bbd000 + 38156713
2 QtWebEngineCore 0x000000011801dcbd 0x115bbd000 + 38145213
3 QtWebEngineCore 0x0000000117dd4cc4 0x115bbd000 + 35749060
4 QtWebEngineCore 0x0000000117d3c085 0x115bbd000 + 35123333
5 QtWebEngineCore 0x0000000117d7da74 0x115bbd000 + 35392116
6 QtWebEngineCore 0x0000000117d8e9bc 0x115bbd000 + 35461564
7 QtWebEngineCore 0x0000000117dce717 0x115bbd000 + 35723031
8 libsystem_pthread.dylib 0x00007fff699ee109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff699e9b8b thread_start + 15
Thread 10:: TaskSchedulerForegroundWorker
0 libsystem_kernel.dylib 0x00007fff6992adfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6992b170 mach_msg + 60
2 QtWebEngineCore 0x0000000117d5f32d 0x115bbd000 + 35267373
3 QtWebEngineCore 0x0000000117d5f421 0x115bbd000 + 35267617
4 QtWebEngineCore 0x0000000117d76d28 0x115bbd000 + 35364136
5 QtWebEngineCore 0x0000000117d7765b 0x115bbd000 + 35366491
6 QtWebEngineCore 0x0000000117d772c4 0x115bbd000 + 35365572
7 QtWebEngineCore 0x0000000117dce717 0x115bbd000 + 35723031
8 libsystem_pthread.dylib 0x00007fff699ee109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff699e9b8b thread_start + 15
Thread 11:: TaskSchedulerForegroundBlockingWorker
0 libsystem_kernel.dylib 0x00007fff6992adfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6992b170 mach_msg + 60
2 QtWebEngineCore 0x0000000117d5f32d 0x115bbd000 + 35267373
3 QtWebEngineCore 0x0000000117d5f421 0x115bbd000 + 35267617
4 QtWebEngineCore 0x0000000117d76d28 0x115bbd000 + 35364136
5 QtWebEngineCore 0x0000000117d7765b 0x115bbd000 + 35366491
6 QtWebEngineCore 0x0000000117d772c4 0x115bbd000 + 35365572
7 QtWebEngineCore 0x0000000117dce717 0x115bbd000 + 35723031
8 libsystem_pthread.dylib 0x00007fff699ee109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff699e9b8b thread_start + 15
Thread 12:: TaskSchedulerForegroundBlockingWorker
0 libsystem_kernel.dylib 0x00007fff6992adfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6992b170 mach_msg + 60
2 QtWebEngineCore 0x0000000117d5f32d 0x115bbd000 + 35267373
3 QtWebEngineCore 0x0000000117d5f421 0x115bbd000 + 35267617
4 QtWebEngineCore 0x0000000117d76d28 0x115bbd000 + 35364136
5 QtWebEngineCore 0x0000000117d7765b 0x115bbd000 + 35366491
6 QtWebEngineCore 0x0000000117d772c4 0x115bbd000 + 35365572
7 QtWebEngineCore 0x0000000117dce717 0x115bbd000 + 35723031
8 libsystem_pthread.dylib 0x00007fff699ee109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff699e9b8b thread_start + 15
Thread 13:: TaskSchedulerForegroundBlockingWorker
0 libsystem_kernel.dylib 0x00007fff6992adfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6992b170 mach_msg + 60
2 QtWebEngineCore 0x0000000117d5f32d 0x115bbd000 + 35267373
3 QtWebEngineCore 0x0000000117d5f421 0x115bbd000 + 35267617
4 QtWebEngineCore 0x0000000117d76d28 0x115bbd000 + 35364136
5 QtWebEngineCore 0x0000000117d773bf 0x115bbd000 + 35365823
6 QtWebEngineCore 0x0000000117d772c4 0x115bbd000 + 35365572
7 QtWebEngineCore 0x0000000117dce717 0x115bbd000 + 35723031
8 libsystem_pthread.dylib 0x00007fff699ee109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff699e9b8b thread_start + 15
Thread 14:: TaskSchedulerBackgroundWorker
0 libsystem_kernel.dylib 0x00007fff6992adfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6992b170 mach_msg + 60
2 QtWebEngineCore 0x0000000117d5f32d 0x115bbd000 + 35267373
3 QtWebEngineCore 0x0000000117d5f421 0x115bbd000 + 35267617
4 QtWebEngineCore 0x0000000117d76d28 0x115bbd000 + 35364136
5 QtWebEngineCore 0x0000000117d7765b 0x115bbd000 + 35366491
6 QtWebEngineCore 0x0000000117d77234 0x115bbd000 + 35365428
7 QtWebEngineCore 0x0000000117dce717 0x115bbd000 + 35723031
8 libsystem_pthread.dylib 0x00007fff699ee109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff699e9b8b thread_start + 15
Thread 15:: Chrome_IOThread
0 libsystem_kernel.dylib 0x00007fff6992f766 kevent + 10
1 QtWebEngineCore 0x00000001180209a9 0x115bbd000 + 38156713
2 QtWebEngineCore 0x000000011801dcbd 0x115bbd000 + 38145213
3 QtWebEngineCore 0x0000000117dd4cc4 0x115bbd000 + 35749060
4 QtWebEngineCore 0x0000000117d3c085 0x115bbd000 + 35123333
5 QtWebEngineCore 0x00000001176aafe4 0x115bbd000 + 28237796
6 QtWebEngineCore 0x0000000117d8e9bc 0x115bbd000 + 35461564
7 QtWebEngineCore 0x0000000117dce717 0x115bbd000 + 35723031
8 libsystem_pthread.dylib 0x00007fff699ee109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff699e9b8b thread_start + 15
Thread 16:: TaskSchedulerSingleThreadSharedBackgroundBlocking0
0 libsystem_kernel.dylib 0x00007fff6992adfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6992b170 mach_msg + 60
2 QtWebEngineCore 0x0000000117d5f32d 0x115bbd000 + 35267373
3 QtWebEngineCore 0x0000000117d5f22f 0x115bbd000 + 35267119
4 QtWebEngineCore 0x0000000117d76d1a 0x115bbd000 + 35364122
5 QtWebEngineCore 0x0000000117d773bf 0x115bbd000 + 35365823
6 QtWebEngineCore 0x0000000117d77264 0x115bbd000 + 35365476
7 QtWebEngineCore 0x0000000117dce717 0x115bbd000 + 35723031
8 libsystem_pthread.dylib 0x00007fff699ee109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff699e9b8b thread_start + 15
Thread 17:: CompositorTileWorker1/57091
0 libsystem_kernel.dylib 0x00007fff6992d882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff699ee425 _pthread_cond_wait + 698
2 QtWebEngineCore 0x0000000117dccfa8 0x115bbd000 + 35717032
3 QtWebEngineCore 0x0000000118d534c8 0x115bbd000 + 51995848
4 QtWebEngineCore 0x0000000117d8d694 0x115bbd000 + 35456660
5 QtWebEngineCore 0x0000000117dce717 0x115bbd000 + 35723031
6 libsystem_pthread.dylib 0x00007fff699ee109 _pthread_start + 148
7 libsystem_pthread.dylib 0x00007fff699e9b8b thread_start + 15
Thread 18:: AudioThread
0 libsystem_kernel.dylib 0x00007fff6992adfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6992b170 mach_msg + 60
2 QtWebEngineCore 0x0000000117d5f32d 0x115bbd000 + 35267373
3 QtWebEngineCore 0x0000000117d5f22f 0x115bbd000 + 35267119
4 QtWebEngineCore 0x0000000117d1305d 0x115bbd000 + 34955357
5 QtWebEngineCore 0x0000000117d3c085 0x115bbd000 + 35123333
6 QtWebEngineCore 0x0000000117d8e9bc 0x115bbd000 + 35461564
7 QtWebEngineCore 0x0000000117dce717 0x115bbd000 + 35723031
8 libsystem_pthread.dylib 0x00007fff699ee109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff699e9b8b thread_start + 15
Thread 19:: Chrome_InProcGpuThread
0 libsystem_kernel.dylib 0x00007fff6992adfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6992b170 mach_msg + 60
2 QtWebEngineCore 0x0000000117d5f32d 0x115bbd000 + 35267373
3 QtWebEngineCore 0x0000000117d13052 0x115bbd000 + 34955346
4 QtWebEngineCore 0x0000000117d3c085 0x115bbd000 + 35123333
5 QtWebEngineCore 0x0000000117d8e9bc 0x115bbd000 + 35461564
6 QtWebEngineCore 0x0000000117dce717 0x115bbd000 + 35723031
7 libsystem_pthread.dylib 0x00007fff699ee109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff699e9b8b thread_start + 15
Thread 20:: Chrome_ChildIOThread
0 libsystem_kernel.dylib 0x00007fff6992f766 kevent + 10
1 QtWebEngineCore 0x00000001180209a9 0x115bbd000 + 38156713
2 QtWebEngineCore 0x000000011801dcbd 0x115bbd000 + 38145213
3 QtWebEngineCore 0x0000000117dd4cdc 0x115bbd000 + 35749084
4 QtWebEngineCore 0x0000000117d3c085 0x115bbd000 + 35123333
5 QtWebEngineCore 0x0000000117d8e9bc 0x115bbd000 + 35461564
6 QtWebEngineCore 0x0000000117dce717 0x115bbd000 + 35723031
7 libsystem_pthread.dylib 0x00007fff699ee109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff699e9b8b thread_start + 15
Thread 21:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff6992adfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6992b170 mach_msg + 60
2 QtWebEngineCore 0x0000000117d5f32d 0x115bbd000 + 35267373
3 QtWebEngineCore 0x0000000117d5f22f 0x115bbd000 + 35267119
4 QtWebEngineCore 0x0000000117d1305d 0x115bbd000 + 34955357
5 QtWebEngineCore 0x0000000117d3c085 0x115bbd000 + 35123333
6 QtWebEngineCore 0x0000000117d8e9bc 0x115bbd000 + 35461564
7 QtWebEngineCore 0x0000000117dce717 0x115bbd000 + 35723031
8 libsystem_pthread.dylib 0x00007fff699ee109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff699e9b8b thread_start + 15
Thread 22:: TaskSchedulerSingleThreadForegroundBlocking1
0 libsystem_kernel.dylib 0x00007fff6992adfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6992b170 mach_msg + 60
2 QtWebEngineCore 0x0000000117d5f32d 0x115bbd000 + 35267373
3 QtWebEngineCore 0x0000000117d5f22f 0x115bbd000 + 35267119
4 QtWebEngineCore 0x0000000117d76d1a 0x115bbd000 + 35364122
5 QtWebEngineCore 0x0000000117d7765b 0x115bbd000 + 35366491
6 QtWebEngineCore 0x0000000117d77324 0x115bbd000 + 35365668
7 QtWebEngineCore 0x0000000117dce717 0x115bbd000 + 35723031
8 libsystem_pthread.dylib 0x00007fff699ee109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff699e9b8b thread_start + 15
Thread 23:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff6992adfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6992b170 mach_msg + 60
2 QtWebEngineCore 0x0000000117d5f32d 0x115bbd000 + 35267373
3 QtWebEngineCore 0x0000000117d5f22f 0x115bbd000 + 35267119
4 QtWebEngineCore 0x0000000117d1305d 0x115bbd000 + 34955357
5 QtWebEngineCore 0x0000000117d3c085 0x115bbd000 + 35123333
6 QtWebEngineCore 0x0000000117d8e9bc 0x115bbd000 + 35461564
7 QtWebEngineCore 0x0000000117dce717 0x115bbd000 + 35723031
8 libsystem_pthread.dylib 0x00007fff699ee109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff699e9b8b thread_start + 15
Thread 24:
0 libsystem_pthread.dylib 0x00007fff699e9b68 start_wqthread + 0
Thread 25:: TaskSchedulerBackgroundBlockingWorker
0 libsystem_kernel.dylib 0x00007fff6992adfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6992b170 mach_msg + 60
2 QtWebEngineCore 0x0000000117d5f32d 0x115bbd000 + 35267373
3 QtWebEngineCore 0x0000000117d5f421 0x115bbd000 + 35267617
4 QtWebEngineCore 0x0000000117d76d28 0x115bbd000 + 35364136
5 QtWebEngineCore 0x0000000117d7765b 0x115bbd000 + 35366491
6 QtWebEngineCore 0x0000000117d77234 0x115bbd000 + 35365428
7 QtWebEngineCore 0x0000000117dce717 0x115bbd000 + 35723031
8 libsystem_pthread.dylib 0x00007fff699ee109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff699e9b8b thread_start + 15
Thread 26:: TaskSchedulerForegroundWorker
0 libsystem_kernel.dylib 0x00007fff6992adfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6992b170 mach_msg + 60
2 QtWebEngineCore 0x0000000117d5f32d 0x115bbd000 + 35267373
3 QtWebEngineCore 0x0000000117d5f421 0x115bbd000 + 35267617
4 QtWebEngineCore 0x0000000117d76d28 0x115bbd000 + 35364136
5 QtWebEngineCore 0x0000000117d7765b 0x115bbd000 + 35366491
6 QtWebEngineCore 0x0000000117d772c4 0x115bbd000 + 35365572
7 QtWebEngineCore 0x0000000117dce717 0x115bbd000 + 35723031
8 libsystem_pthread.dylib 0x00007fff699ee109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff699e9b8b thread_start + 15
Thread 27:: TaskSchedulerBackgroundBlockingWorker
0 libsystem_kernel.dylib 0x00007fff6992adfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6992b170 mach_msg + 60
2 QtWebEngineCore 0x0000000117d5f32d 0x115bbd000 + 35267373
3 QtWebEngineCore 0x0000000117d5f421 0x115bbd000 + 35267617
4 QtWebEngineCore 0x0000000117d76d28 0x115bbd000 + 35364136
5 QtWebEngineCore 0x0000000117d7765b 0x115bbd000 + 35366491
6 QtWebEngineCore 0x0000000117d77234 0x115bbd000 + 35365428
7 QtWebEngineCore 0x0000000117dce717 0x115bbd000 + 35723031
8 libsystem_pthread.dylib 0x00007fff699ee109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff699e9b8b thread_start + 15
Thread 28:
0 libsystem_pthread.dylib 0x00007fff699e9b68 start_wqthread + 0
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x000000011013ddc0 rcx: 0x00007fa95d677a58 rdx: 0x0000000000000000
rdi: 0x0000000000000307 rsi: 0x0000000000000006 rbp: 0x00007fa95d677a80 rsp: 0x00007fa95d677a58
r8: 0x00007fa95d677f48 r9: 0x9684b9a9bad82633 r10: 0x000000011013ddc0 r11: 0x0000000000000246
r12: 0x0000000000000307 r13: 0x00007fa95d49c4f0 r14: 0x0000000000000006 r15: 0x0000000000000016
rip: 0x00007fff6993133a rfl: 0x0000000000000246 cr2: 0x000000010189ef7c
Logical CPU: 0
Error Code: 0x02000148
Trap Number: 133
Binary Images:
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0x1021bc000 - 0x1021c5ffb +_socket.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_socket.cpython-37m-darwin.so
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0x102237000 - 0x10223bff7 +binascii.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/binascii.cpython-37m-darwin.so
0x102344000 - 0x102352ff3 +_datetime.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_datetime.cpython-37m-darwin.so
0x1023a2000 - 0x1023a2ff3 +_scproxy.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_scproxy.cpython-37m-darwin.so
0x1023aa000 - 0x1023e8ff7 +_decimal.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_decimal.cpython-37m-darwin.so
0x10244c000 - 0x102479ff3 +pyexpat.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/pyexpat.cpython-37m-darwin.so
0x102491000 - 0x102492ff3 +_queue.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_queue.cpython-37m-darwin.so
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0x1025a4000 - 0x1025b6fff +_pickle.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_pickle.cpython-37m-darwin.so
0x102607000 - 0x10260affb +_csv.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_csv.cpython-37m-darwin.so
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0x7fff6759d000 - 0x7fff675a6ff7 libheimdal-asn1.dylib (564.140.2) /usr/lib/libheimdal-asn1.dylib
0x7fff675a7000 - 0x7fff67697fff libiconv.2.dylib (59) /usr/lib/libiconv.2.dylib
0x7fff67698000 - 0x7fff678effff libicucore.A.dylib (64260.0.1) /usr/lib/libicucore.A.dylib
0x7fff67909000 - 0x7fff6790afff liblangid.dylib (133) /usr/lib/liblangid.dylib
0x7fff6790b000 - 0x7fff67923ff3 liblzma.5.dylib (16) /usr/lib/liblzma.5.dylib
0x7fff6793b000 - 0x7fff679e2ff7 libmecab.dylib (883.11) /usr/lib/libmecab.dylib
0x7fff679e3000 - 0x7fff67c45ff1 libmecabra.dylib (883.11) /usr/lib/libmecabra.dylib
0x7fff67fb2000 - 0x7fff67fe1fff libncurses.5.4.dylib (57) /usr/lib/libncurses.5.4.dylib
0x7fff68111000 - 0x7fff6858dff5 libnetwork.dylib (1880.120.4) /usr/lib/libnetwork.dylib
0x7fff6858e000 - 0x7fff685a5fff libnetworkextension.dylib (1095.140.2) /usr/lib/libnetworkextension.dylib
0x7fff6862e000 - 0x7fff68661fde libobjc.A.dylib (787.1) /usr/lib/libobjc.A.dylib
0x7fff68674000 - 0x7fff68678fff libpam.2.dylib (25.100.1) /usr/lib/libpam.2.dylib
0x7fff6867b000 - 0x7fff686b1fff libpcap.A.dylib (89.120.2) /usr/lib/libpcap.A.dylib
0x7fff686f1000 - 0x7fff686ffff9 libperfcheck.dylib (37.100.2) /usr/lib/libperfcheck.dylib
0x7fff68735000 - 0x7fff6874dfff libresolv.9.dylib (67.40.1) /usr/lib/libresolv.9.dylib
0x7fff6874f000 - 0x7fff68793ff7 libsandbox.1.dylib (1217.141.2) /usr/lib/libsandbox.1.dylib
0x7fff687a7000 - 0x7fff687a8ff7 libspindump.dylib (281.3) /usr/lib/libspindump.dylib
0x7fff687a9000 - 0x7fff68993ff7 libsqlite3.dylib (308.6) /usr/lib/libsqlite3.dylib
0x7fff68b89000 - 0x7fff68be3ff8 libusrtcp.dylib (1880.120.4) /usr/lib/libusrtcp.dylib
0x7fff68be4000 - 0x7fff68be7ffb libutil.dylib (57) /usr/lib/libutil.dylib
0x7fff68be8000 - 0x7fff68bf5ff7 libxar.1.dylib (425.2) /usr/lib/libxar.1.dylib
0x7fff68bfb000 - 0x7fff68cddfff libxml2.2.dylib (33.8) /usr/lib/libxml2.2.dylib
0x7fff68ce1000 - 0x7fff68d09fff libxslt.1.dylib (16.11) /usr/lib/libxslt.1.dylib
0x7fff68d0a000 - 0x7fff68d1cff3 libz.1.dylib (76) /usr/lib/libz.1.dylib
0x7fff695cb000 - 0x7fff695d0ff3 libcache.dylib (83) /usr/lib/system/libcache.dylib
0x7fff695d1000 - 0x7fff695dcfff libcommonCrypto.dylib (60165.120.1) /usr/lib/system/libcommonCrypto.dylib
0x7fff695dd000 - 0x7fff695e4fff libcompiler_rt.dylib (101.2) /usr/lib/system/libcompiler_rt.dylib
0x7fff695e5000 - 0x7fff695eeff7 libcopyfile.dylib (166.40.1) /usr/lib/system/libcopyfile.dylib
0x7fff695ef000 - 0x7fff69681fdb libcorecrypto.dylib (866.140.2) /usr/lib/system/libcorecrypto.dylib
0x7fff6978e000 - 0x7fff697ceff0 libdispatch.dylib (1173.100.2) /usr/lib/system/libdispatch.dylib
0x7fff697cf000 - 0x7fff69805fff libdyld.dylib (750.6) /usr/lib/system/libdyld.dylib
0x7fff69806000 - 0x7fff69806ffb libkeymgr.dylib (30) /usr/lib/system/libkeymgr.dylib
0x7fff69807000 - 0x7fff69813ff3 libkxld.dylib (6153.141.28.1) /usr/lib/system/libkxld.dylib
0x7fff69814000 - 0x7fff69814ff7 liblaunch.dylib (1738.140.3) /usr/lib/system/liblaunch.dylib
0x7fff69815000 - 0x7fff6981aff7 libmacho.dylib (959.0.1) /usr/lib/system/libmacho.dylib
0x7fff6981b000 - 0x7fff6981dff3 libquarantine.dylib (110.40.3) /usr/lib/system/libquarantine.dylib
0x7fff6981e000 - 0x7fff6981fff7 libremovefile.dylib (48) /usr/lib/system/libremovefile.dylib
0x7fff69820000 - 0x7fff69837ff3 libsystem_asl.dylib (377.60.2) /usr/lib/system/libsystem_asl.dylib
0x7fff69838000 - 0x7fff69838ff7 libsystem_blocks.dylib (74) /usr/lib/system/libsystem_blocks.dylib
0x7fff69839000 - 0x7fff698c0fff libsystem_c.dylib (1353.100.2) /usr/lib/system/libsystem_c.dylib
0x7fff698c1000 - 0x7fff698c4ffb libsystem_configuration.dylib (1061.141.1) /usr/lib/system/libsystem_configuration.dylib
0x7fff698c5000 - 0x7fff698c8fff libsystem_coreservices.dylib (114) /usr/lib/system/libsystem_coreservices.dylib
0x7fff698c9000 - 0x7fff698d1fff libsystem_darwin.dylib (1353.100.2) /usr/lib/system/libsystem_darwin.dylib
0x7fff698d2000 - 0x7fff698d9fff libsystem_dnssd.dylib (1096.100.3) /usr/lib/system/libsystem_dnssd.dylib
0x7fff698da000 - 0x7fff698dbffb libsystem_featureflags.dylib (17) /usr/lib/system/libsystem_featureflags.dylib
0x7fff698dc000 - 0x7fff69929ff7 libsystem_info.dylib (538) /usr/lib/system/libsystem_info.dylib
0x7fff6992a000 - 0x7fff69956ff7 libsystem_kernel.dylib (6153.141.28.1) /usr/lib/system/libsystem_kernel.dylib
0x7fff69957000 - 0x7fff6999efff libsystem_m.dylib (3178) /usr/lib/system/libsystem_m.dylib
0x7fff6999f000 - 0x7fff699c6fff libsystem_malloc.dylib (283.100.6) /usr/lib/system/libsystem_malloc.dylib
0x7fff699c7000 - 0x7fff699d4ffb libsystem_networkextension.dylib (1095.140.2) /usr/lib/system/libsystem_networkextension.dylib
0x7fff699d5000 - 0x7fff699deff7 libsystem_notify.dylib (241.100.2) /usr/lib/system/libsystem_notify.dylib
0x7fff699df000 - 0x7fff699e7fef libsystem_platform.dylib (220.100.1) /usr/lib/system/libsystem_platform.dylib
0x7fff699e8000 - 0x7fff699f2fff libsystem_pthread.dylib (416.100.3) /usr/lib/system/libsystem_pthread.dylib
0x7fff699f3000 - 0x7fff699f7ff3 libsystem_sandbox.dylib (1217.141.2) /usr/lib/system/libsystem_sandbox.dylib
0x7fff699f8000 - 0x7fff699fafff libsystem_secinit.dylib (62.100.2) /usr/lib/system/libsystem_secinit.dylib
0x7fff699fb000 - 0x7fff69a02ffb libsystem_symptoms.dylib (1238.120.2) /usr/lib/system/libsystem_symptoms.dylib
0x7fff69a03000 - 0x7fff69a19ff2 libsystem_trace.dylib (1147.120.1) /usr/lib/system/libsystem_trace.dylib
0x7fff69a1b000 - 0x7fff69a20ff7 libunwind.dylib (35.4) /usr/lib/system/libunwind.dylib
0x7fff69a21000 - 0x7fff69a56ffe libxpc.dylib (1738.140.3) /usr/lib/system/libxpc.dylib
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 13
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 134061113
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=927.8M resident=0K(0%) swapped_out_or_unallocated=927.8M(100%)
Writable regions: Total=1.5G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=1.5G(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 256K 2
Activity Tracing 256K 1
CG backing stores 1760K 2
CG image 104K 8
CoreAnimation 104K 11
CoreGraphics 8K 1
CoreImage 24K 2
CoreUI image data 2228K 17
Foundation 4K 1
Kernel Alloc Once 8K 1
MALLOC 955.9M 310
MALLOC guard page 32K 7
MALLOC_LARGE (reserved) 384K 1 reserved VM address space (unallocated)
OpenGL GLSL 512K 6
PROTECTED_MEMORY 4K 1
STACK GUARD 112K 28
Stack 172.2M 29
Stack Guard 56.0M 1
VM_ALLOCATE 326.0M 379
VM_ALLOCATE (reserved) 96.0M 2 reserved VM address space (unallocated)
__DATA 61.1M 533
__DATA_CONST 128K 6
__FONT_DATA 4K 1
__GLSLBUILTINS 5176K 1
__LINKEDIT 413.4M 140
__OBJC_RO 32.3M 1
__OBJC_RW 1908K 2
__TEXT 514.5M 503
__UNICODE 564K 1
mapped file 82.1M 40
shared memory 708K 17
=========== ======= =======
TOTAL 2.7G 2055
TOTAL, minus reserved VM space 2.6G 2055
Log:
UCSF ChimeraX version: 1.1.1 (2020-10-07)
© 2016-2020 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open /Users/hwang5/Documents/PIC-Nuc/map_max_bin2.mrc
Opened map_max_bin2.mrc, grid size 180,180,180, pixel 2.1, shown at level
0.0229, step 1, values float32
OpenGL version: 4.1 ATI-3.10.19
OpenGL renderer: AMD Radeon Pro 580X OpenGL Engine
OpenGL vendor: ATI Technologies Inc.Hardware:
Hardware Overview:
Model Name: iMac
Model Identifier: iMac19,1
Processor Name: 6-Core Intel Core i5
Processor Speed: 3,7 GHz
Number of Processors: 1
Total Number of Cores: 6
L2 Cache (per Core): 256 KB
L3 Cache: 9 MB
Memory: 16 GB
Boot ROM Version: 1554.100.64.0.0
SMC Version (system): 2.46f12
Software:
System Software Overview:
System Version: macOS 10.15.7 (19H1030)
Kernel Version: Darwin 19.6.0
Time since boot: 21 days 23:58
Graphics/Displays:
Radeon Pro 580X:
Chipset Model: Radeon Pro 580X
Type: GPU
Bus: PCIe
PCIe Lane Width: x16
VRAM (Total): 8 GB
Vendor: AMD (0x1002)
Device ID: 0x67df
Revision ID: 0x00c0
ROM Revision: 113-D0008A-042
VBIOS Version: 113-D0008A1X-009
EFI Driver Version: 01.B1.042
Metal: Supported, feature set macOS GPUFamily2 v1
Displays:
iMac:
Display Type: Built-In Retina LCD
Resolution: 5120 x 2880 Retina
Framebuffer Depth: 30-Bit Color (ARGB2101010)
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: No
Connection Type: Internal
PyQt version: 5.12.3
Compiled Qt version: 5.12.4
Runtime Qt version: 5.12.9
Installed Packages:
alabaster: 0.7.12
appdirs: 1.4.4
appnope: 0.1.0
Babel: 2.8.0
backcall: 0.2.0
blockdiag: 2.0.1
certifi: 2020.6.20
chardet: 3.0.4
ChimeraX-AddH: 2.1.3
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.1
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.6.1
ChimeraX-AtomSearch: 2.0
ChimeraX-AxesPlanes: 2.0
ChimeraX-BasicActions: 1.1
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 1.0.1
ChimeraX-BondRot: 2.0
ChimeraX-BugReporter: 1.0
ChimeraX-BuildStructure: 2.0
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.0
ChimeraX-ButtonPanel: 1.0
ChimeraX-CageBuilder: 1.0
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.1
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.0
ChimeraX-ColorActions: 1.0
ChimeraX-ColorGlobe: 1.0
ChimeraX-CommandLine: 1.1.3
ChimeraX-ConnectStructure: 2.0
ChimeraX-Contacts: 1.0
ChimeraX-Core: 1.1.1
ChimeraX-CoreFormats: 1.0
ChimeraX-coulombic: 1.0.1
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-DataFormats: 1.0
ChimeraX-Dicom: 1.0
ChimeraX-DistMonitor: 1.1
ChimeraX-DistUI: 1.0
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0
ChimeraX-FunctionKey: 1.0
ChimeraX-Geometry: 1.1
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.0
ChimeraX-Hbonds: 2.0
ChimeraX-Help: 1.0
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.0
ChimeraX-ImageFormats: 1.0
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0
ChimeraX-Label: 1.0
ChimeraX-ListInfo: 1.0
ChimeraX-Log: 1.1.1
ChimeraX-LookingGlass: 1.1
ChimeraX-Map: 1.0.1
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.0
ChimeraX-Markers: 1.0
ChimeraX-Mask: 1.0
ChimeraX-MatchMaker: 1.1
ChimeraX-MDcrds: 2.0
ChimeraX-MedicalToolbar: 1.0.1
ChimeraX-Meeting: 1.0
ChimeraX-MLP: 1.0
ChimeraX-mmCIF: 2.2
ChimeraX-MMTF: 2.0
ChimeraX-Modeller: 1.0
ChimeraX-ModelPanel: 1.0
ChimeraX-ModelSeries: 1.0
ChimeraX-Mol2: 2.0
ChimeraX-Morph: 1.0
ChimeraX-MouseModes: 1.0
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0
ChimeraX-OpenCommand: 1.2.1
ChimeraX-PDB: 2.1
ChimeraX-PDBBio: 1.0
ChimeraX-PickBlobs: 1.0
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.0
ChimeraX-PubChem: 2.0
ChimeraX-Read-Pbonds: 1.0
ChimeraX-Registration: 1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-ResidueFit: 1.0
ChimeraX-RestServer: 1.0
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.2
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SeqView: 2.2
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0
ChimeraX-Shortcuts: 1.0
ChimeraX-ShowAttr: 1.0
ChimeraX-ShowSequences: 1.0
ChimeraX-SideView: 1.0
ChimeraX-Smiles: 2.0
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.0.4
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-Struts: 1.0
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0
ChimeraX-SwapRes: 2.0
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.0
ChimeraX-ToolshedUtils: 1.0
ChimeraX-Tug: 1.0
ChimeraX-UI: 1.2.3
ChimeraX-uniprot: 2.0
ChimeraX-ViewDockX: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0
ChimeraX-WebServices: 1.0
ChimeraX-Zone: 1.0
colorama: 0.4.3
comtypes: 1.1.7
cxservices: 1.0
cycler: 0.10.0
Cython: 0.29.20
decorator: 4.4.2
distlib: 0.3.1
docutils: 0.16
filelock: 3.0.12
funcparserlib: 0.3.6
grako: 3.16.5
h5py: 2.10.0
html2text: 2020.1.16
idna: 2.10
ihm: 0.16
imagecodecs: 2020.5.30
imagecodecs-lite: 2020.1.31
imagesize: 1.2.0
ipykernel: 5.3.0
ipython: 7.15.0
ipython-genutils: 0.2.0
jedi: 0.17.2
Jinja2: 2.11.2
jupyter-client: 6.1.3
jupyter-core: 4.6.3
kiwisolver: 1.2.0
line-profiler: 2.1.2
lxml: 4.5.1
MarkupSafe: 1.1.1
matplotlib: 3.2.1
msgpack: 1.0.0
netifaces: 0.10.9
networkx: 2.4
numexpr: 2.7.1
numpy: 1.18.5
numpydoc: 1.0.0
openvr: 1.12.501
packaging: 20.4
parso: 0.7.1
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 7.1.2
pip: 20.2.2
pkginfo: 1.5.0.1
prompt-toolkit: 3.0.7
psutil: 5.7.0
ptyprocess: 0.6.0
pycollada: 0.7.1
pydicom: 2.0.0
Pygments: 2.6.1
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 2.4.7
PyQt5-commercial: 5.12.3
PyQt5-sip: 4.19.19
PyQtWebEngine-commercial: 5.12.1
python-dateutil: 2.8.1
pytz: 2020.1
pyzmq: 19.0.2
qtconsole: 4.7.4
QtPy: 1.9.0
RandomWords: 0.3.0
requests: 2.24.0
scipy: 1.4.1
setuptools: 49.4.0
sfftk-rw: 0.6.6.dev0
six: 1.15.0
snowballstemmer: 2.0.0
sortedcontainers: 2.2.2
Sphinx: 3.1.1
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 2.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 1.0.3
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.4
suds-jurko: 0.6
tables: 3.6.1
tifffile: 2020.6.3
tinyarray: 1.2.2
tornado: 6.0.4
traitlets: 5.0.4
urllib3: 1.25.10
wcwidth: 0.2.5
webcolors: 1.11.1
wheel: 0.34.2
![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Apple graphics driver crash. I suspect volume contour level was being changed by dragging the threshold bar on the volume viewer histogram
55 QtWidgets.so 0x00000001122399d7 sipQGraphicsView::mouseMoveEvent(QMouseEvent*) + 103
Caused immediate redraw and OpenGL swap buffers where the crash happened.
Do PyQt callbacks to Python ever get invoked in a non-main thread? It is possible that trying to render OpenGL in a different thread might cause a crash. I think it is not too likely. The new crash reporting that includes the Python stack trace for all threads will show if this is happening in bug reports from ChimeraX 1.2 or newer.