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Opened 5 years ago
Closed 5 years ago
#4336 closed defect (duplicate)
Listing desktop to save image: Operation not permitted
| Reported by: | Owned by: | Tom Goddard | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Platform | Version: | |
| Keywords: | Cc: | pett | |
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted: Platform: Darwin-19.6.0-x86_64-i386-64bit ChimeraX Version: 0.92 (2020-02-01) Description (Describe the actions that caused this problem to occur here) Log: Startup Messages --- note | Updating list of available bundles failed: Internal Server Error UCSF ChimeraX version: 0.92 (2020-02-01) © 2016-2020 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX > open > /Users/purbashanandi/Downloads/cryosparc_P31_J123_005_volume_map_sharp.mrc Opened cryosparc_P31_J123_005_volume_map_sharp.mrc, grid size 240,240,240, pixel 1.3, shown at level 0.211, step 1, values float32 > set bgColor white > open "/Users/purbashanandi/Dropbox (ASU)/Paper > p97-p47/linkermutant_030821/cryosparc_P31_J189_class_00_final_volume.mrc" Opened cryosparc_P31_J189_class_00_final_volume.mrc, grid size 192,192,192, pixel 1.95, shown at level 0.153, step 1, values float32 > hide #!1 models > volume #2 level 0.231 > volume #2 level 0.171 > volume #2 level 0.2035 > volume #2 level 0.1885 > lighting simple > lighting soft > lighting full > volume #2 level 0.1935 > lighting full Traceback (most recent call last): File "/Volumes/ChimeraXInstaller/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site- packages/chimerax/toolbar/tool.py", line 162, in callback bundle_info.run_provider(session, name, session.toolbar, display_name=display_name) File "/Volumes/ChimeraXInstaller/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site- packages/chimerax/core/toolshed/info.py", line 453, in run_provider return api._api_caller.run_provider(api, session, name, mgr, **kw) File "/Volumes/ChimeraXInstaller/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site- packages/chimerax/core/toolshed/__init__.py", line 1632, in run_provider return cls._get_func(api, "run_provider")(session, name, mgr, **kw) File "/Volumes/ChimeraXInstaller/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site- packages/chimerax/shortcuts/__init__.py", line 52, in run_provider shortcuts.run_provider(session, name) File "/Volumes/ChimeraXInstaller/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site- packages/chimerax/shortcuts/shortcuts.py", line 1147, in run_provider keyboard_shortcuts(session).try_shortcut(name) File "/Volumes/ChimeraXInstaller/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site- packages/chimerax/shortcuts/shortcuts.py", line 373, in try_shortcut self.run_shortcut(keys) File "/Volumes/ChimeraXInstaller/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site- packages/chimerax/shortcuts/shortcuts.py", line 391, in run_shortcut sc.run(self.session, status = self._enabled) File "/Volumes/ChimeraXInstaller/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site- packages/chimerax/shortcuts/shortcuts.py", line 310, in run f(s) File "/Volumes/ChimeraXInstaller/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site- packages/chimerax/shortcuts/shortcuts.py", line 1073, in save_image path = unused_file_name(directory, basename, suffix) File "/Volumes/ChimeraXInstaller/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site- packages/chimerax/shortcuts/shortcuts.py", line 1093, in unused_file_name files = listdir(dir) PermissionError: [Errno 1] Operation not permitted: '/Users/purbashanandi/Desktop' PermissionError: [Errno 1] Operation not permitted: '/Users/purbashanandi/Desktop' File "/Volumes/ChimeraXInstaller/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site- packages/chimerax/shortcuts/shortcuts.py", line 1093, in unused_file_name files = listdir(dir) See log for complete Python traceback. Traceback (most recent call last): File "/Volumes/ChimeraXInstaller/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site- packages/chimerax/toolbar/tool.py", line 162, in callback bundle_info.run_provider(session, name, session.toolbar, display_name=display_name) File "/Volumes/ChimeraXInstaller/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site- packages/chimerax/core/toolshed/info.py", line 453, in run_provider return api._api_caller.run_provider(api, session, name, mgr, **kw) File "/Volumes/ChimeraXInstaller/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site- packages/chimerax/core/toolshed/__init__.py", line 1632, in run_provider return cls._get_func(api, "run_provider")(session, name, mgr, **kw) File "/Volumes/ChimeraXInstaller/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site- packages/chimerax/shortcuts/__init__.py", line 52, in run_provider shortcuts.run_provider(session, name) File "/Volumes/ChimeraXInstaller/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site- packages/chimerax/shortcuts/shortcuts.py", line 1147, in run_provider keyboard_shortcuts(session).try_shortcut(name) File "/Volumes/ChimeraXInstaller/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site- packages/chimerax/shortcuts/shortcuts.py", line 373, in try_shortcut self.run_shortcut(keys) File "/Volumes/ChimeraXInstaller/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site- packages/chimerax/shortcuts/shortcuts.py", line 391, in run_shortcut sc.run(self.session, status = self._enabled) File "/Volumes/ChimeraXInstaller/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site- packages/chimerax/shortcuts/shortcuts.py", line 310, in run f(s) File "/Volumes/ChimeraXInstaller/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site- packages/chimerax/shortcuts/shortcuts.py", line 1073, in save_image path = unused_file_name(directory, basename, suffix) File "/Volumes/ChimeraXInstaller/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site- packages/chimerax/shortcuts/shortcuts.py", line 1093, in unused_file_name files = listdir(dir) PermissionError: [Errno 1] Operation not permitted: '/Users/purbashanandi/Desktop' PermissionError: [Errno 1] Operation not permitted: '/Users/purbashanandi/Desktop' File "/Volumes/ChimeraXInstaller/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site- packages/chimerax/shortcuts/shortcuts.py", line 1093, in unused_file_name files = listdir(dir) See log for complete Python traceback. > volume #2 level 0.221 Traceback (most recent call last): File "/Volumes/ChimeraXInstaller/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site- packages/chimerax/toolbar/tool.py", line 162, in callback bundle_info.run_provider(session, name, session.toolbar, display_name=display_name) File "/Volumes/ChimeraXInstaller/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site- packages/chimerax/core/toolshed/info.py", line 453, in run_provider return api._api_caller.run_provider(api, session, name, mgr, **kw) File "/Volumes/ChimeraXInstaller/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site- packages/chimerax/core/toolshed/__init__.py", line 1632, in run_provider return cls._get_func(api, "run_provider")(session, name, mgr, **kw) File "/Volumes/ChimeraXInstaller/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site- packages/chimerax/shortcuts/__init__.py", line 52, in run_provider shortcuts.run_provider(session, name) File "/Volumes/ChimeraXInstaller/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site- packages/chimerax/shortcuts/shortcuts.py", line 1147, in run_provider keyboard_shortcuts(session).try_shortcut(name) File "/Volumes/ChimeraXInstaller/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site- packages/chimerax/shortcuts/shortcuts.py", line 373, in try_shortcut self.run_shortcut(keys) File "/Volumes/ChimeraXInstaller/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site- packages/chimerax/shortcuts/shortcuts.py", line 391, in run_shortcut sc.run(self.session, status = self._enabled) File "/Volumes/ChimeraXInstaller/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site- packages/chimerax/shortcuts/shortcuts.py", line 310, in run f(s) File "/Volumes/ChimeraXInstaller/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site- packages/chimerax/shortcuts/shortcuts.py", line 1073, in save_image path = unused_file_name(directory, basename, suffix) File "/Volumes/ChimeraXInstaller/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site- packages/chimerax/shortcuts/shortcuts.py", line 1093, in unused_file_name files = listdir(dir) PermissionError: [Errno 1] Operation not permitted: '/Users/purbashanandi/Desktop' PermissionError: [Errno 1] Operation not permitted: '/Users/purbashanandi/Desktop' File "/Volumes/ChimeraXInstaller/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site- packages/chimerax/shortcuts/shortcuts.py", line 1093, in unused_file_name files = listdir(dir) See log for complete Python traceback. OpenGL version: 4.1 ATI-3.10.16 OpenGL renderer: AMD Radeon Pro 555 OpenGL Engine OpenGL vendor: ATI Technologies Inc.
Change History (3)
comment:1 by , 5 years ago
| Cc: | added |
|---|---|
| Component: | Unassigned → Platform |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → assigned |
| Summary: | ChimeraX bug report submission → Listing desktop to save image: Operation not permitted |
comment:2 by , 5 years ago
comment:3 by , 5 years ago
| Resolution: | → duplicate |
|---|---|
| Status: | assigned → closed |
Already have a user friendly error message being generated. This report uses old ChimeraX 0.92.
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User denied ChimeraX permission to write to the desktop then tried to use the Snapshot toolbar icon which writes the image to the desktop. I should put in a user-friendly warning that the Desktop cannot be accessed. And if on Mac say in the warning how to give access in System Preferences.