![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 5 years ago
Last modified 5 years ago
#4329 feedback defect
Crash with trashed stack
| Reported by: | Owned by: | Eric Pettersen | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Core | Version: | |
| Keywords: | Cc: | Tom Goddard | |
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: Darwin-20.3.0-x86_64-i386-64bit
ChimeraX Version: 1.1.1 (2020-10-07 08:32:49 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Process: ChimeraX [2917]
Path: /private/var/folders/*/ChimeraX-1.1.1.app/Contents/MacOS/ChimeraX
Identifier: edu.ucsf.cgl.ChimeraX
Version: 1.1.1 (1.1.1.0)
Code Type: X86-64 (Native)
Parent Process: ??? [1]
Responsible: ChimeraX [2917]
User ID: 501
Date/Time: 2021-03-05 12:15:59.360 -0600
OS Version: macOS 11.2.1 (20D75)
Report Version: 12
Anonymous UUID: A832F19F-A2C4-19EC-C629-C876FADFA32E
Time Awake Since Boot: 7200 seconds
System Integrity Protection: enabled
Crashed Thread: 0 CrBrowserMain
Exception Type: EXC_BAD_ACCESS (SIGBUS)
Exception Codes: KERN_MEMORY_ERROR at 0x0000000104e658b1
Exception Note: EXC_CORPSE_NOTIFY
Termination Signal: Bus error: 10
Termination Reason: Namespace SIGNAL, Code 0xa
Terminating Process: exc handler [2917]
VM Regions Near 0x104e658b1:
VM_ALLOCATE 104d26000-104d27000 [ 4K] rwx/rwx SM=COW
--> mapped file 104d27000-104f23000 [ 2032K] r-x/rwx SM=COW Object_id=c4a3772f
mapped file 104f23000-104f88000 [ 404K] rw-/rwx SM=COW Object_id=c352562f
Thread 0 Crashed:: CrBrowserMain
0 ??? 0x0000000104e658b1 0 + 4377172145
1 ??? 0x0000000104e65c55 0 + 4377173077
2 ??? 0x0000000104e65e12 0 + 4377173522
3 ??? 0x0000000104ec61b4 0 + 4377567668
4 ??? 0x00007fff20456d7d 0 + 140733734808957
5 ChimeraX 000000000000000000 0 + 0
6 ??? 0x00007fff20509c3d 0 + 140733735541821
7 ??? 0x00007fff20509436 0 + 140733735539766
8 ??? 0x00007fff205086ce 0 + 140733735536334
9 ??? 0x00007fff28790630 0 + 140733872408112
10 ??? 0x00007fff2879042c 0 + 140733872407596
11 ??? 0x00007fff2879014f 0 + 140733872406863
12 ??? 0x00007fff22d289b1 0 + 140733777611185
13 ??? 0x00007fff22d27177 0 + 140733777604983
14 ??? 0x00007fff22d1968a 0 + 140733777548938
15 ??? 0x0000000120976de3 0 + 4841762275
16 ??? 0x0000000116aca93f 0 + 4675381567
17 ??? 0x0000000116acf932 0 + 4675402034
18 ??? 0x0000000115a927d2 0 + 4658374610
19 ??? 0x0000000104d4b382 0 + 4376015746
20 ??? 0x0000000104d4a8b9 0 + 4376012985
21 ??? 0x0000000104e1fb60 0 + 4376886112
22 ??? 0x0000000104e1c817 0 + 4376872983
23 ??? 0x0000000104d4ad61 0 + 4376014177
24 ??? 0x0000000104e1fbd4 0 + 4376886228
25 ??? 0x0000000104e1c817 0 + 4376872983
26 ??? 0x0000000104e20a2c 0 + 4376889900
27 ??? 0x0000000104d4a879 0 + 4376012921
28 ??? 0x0000000104e1fbd4 0 + 4376886228
29 ??? 0x0000000104e1c8ae 0 + 4376873134
30 ??? 0x0000000104e20a2c 0 + 4376889900
31 ??? 0x0000000104e15fb0 0 + 4376846256
32 ??? 0x0000000104e13547 0 + 4376835399
33 ??? 0x0000000104d4b52d 0 + 4376016173
34 ??? 0x0000000104d4a8b9 0 + 4376012985
35 ??? 0x0000000104e1fb60 0 + 4376886112
36 ??? 0x0000000104e1c8ae 0 + 4376873134
37 ??? 0x0000000104e20a2c 0 + 4376889900
38 ??? 0x0000000104d4a879 0 + 4376012921
39 ??? 0x0000000104e1fbd4 0 + 4376886228
40 ??? 0x0000000104e1c8ae 0 + 4376873134
41 ??? 0x0000000104e20a2c 0 + 4376889900
42 ??? 0x0000000104d4a377 0 + 4376011639
43 ??? 0x0000000104e7aaf3 0 + 4377258739
44 ??? 0x0000000104e79bdc 0 + 4377254876
45 ??? 0x0000000104e784c3 0 + 4377248963
46 ??? 0x0000000104d1adc8 0 + 4375817672
47 ??? 0x00007fff2042d621 0 + 140733734639137
Thread 1:: com.apple.NSEventThread
0 ??? 0x00007fff203dde7e 0 + 140733734313598
1 ??? 0x00007fff203de1f0 0 + 140733734314480
2 ??? 0x00007fff2050abf7 0 + 140733735545847
3 ??? 0x00007fff205092ca 0 + 140733735539402
4 ??? 0x00007fff205086ce 0 + 140733735536334
5 ??? 0x00007fff22eae7c6 0 + 140733779208134
6 ??? 0x00007fff20412950 0 + 140733734529360
7 ??? 0x00007fff2040e47b 0 + 140733734511739
Thread 2:: NetworkConfigWatcher
0 ??? 0x00007fff203dde7e 0 + 140733734313598
1 ??? 0x00007fff203de1f0 0 + 140733734314480
2 ??? 0x000000011b4e932d 0 + 4753101613
3 ??? 0x000000011b4e922f 0 + 4753101359
4 ??? 0x000000011b49d05d 0 + 4752789597
5 ??? 0x000000011b4c6085 0 + 4752957573
6 ??? 0x000000011b5189bc 0 + 4753295804
7 ??? 0x000000011b558717 0 + 4753557271
8 ??? 0x00007fff20412950 0 + 140733734529360
9 ??? 0x00007fff2040e47b 0 + 140733734511739
Thread 3:: DnsConfigService
0 ??? 0x00007fff203e27e2 0 + 140733734332386
1 ??? 0x000000011b7a7cbd 0 + 4755979453
2 ??? 0x000000011b55ecdc 0 + 4753583324
3 ??? 0x000000011b4c6085 0 + 4752957573
4 ??? 0x000000011b5189bc 0 + 4753295804
5 ??? 0x000000011b558717 0 + 4753557271
6 ??? 0x00007fff20412950 0 + 140733734529360
7 ??? 0x00007fff2040e47b 0 + 140733734511739
Thread 4:: TaskSchedulerServiceThread
0 ??? 0x00007fff203e27e2 0 + 140733734332386
1 ??? 0x000000011b7a7cbd 0 + 4755979453
2 ??? 0x000000011b55ecc4 0 + 4753583300
3 ??? 0x000000011b4c6085 0 + 4752957573
4 ??? 0x000000011b507a74 0 + 4753226356
5 ??? 0x000000011b5189bc 0 + 4753295804
6 ??? 0x000000011b558717 0 + 4753557271
7 ??? 0x00007fff20412950 0 + 140733734529360
8 ??? 0x00007fff2040e47b 0 + 140733734511739
Thread 5:: TaskSchedulerForegroundWorker
0 ??? 0x00007fff203dde7e 0 + 140733734313598
1 ??? 0x00007fff203de1f0 0 + 140733734314480
2 ??? 0x000000011b4e932d 0 + 4753101613
3 ??? 0x000000011b4e9421 0 + 4753101857
4 ??? 0x000000011b500d28 0 + 4753198376
5 ??? 0x000000011b50165b 0 + 4753200731
6 ??? 0x000000011b5012c4 0 + 4753199812
7 ??? 0x000000011b558717 0 + 4753557271
8 ??? 0x00007fff20412950 0 + 140733734529360
9 ??? 0x00007fff2040e47b 0 + 140733734511739
Thread 6:: TaskSchedulerForegroundBlockingWorker
0 ??? 0x00007fff203dde7e 0 + 140733734313598
1 ??? 0x00007fff203de1f0 0 + 140733734314480
2 ??? 0x000000011b4e932d 0 + 4753101613
3 ??? 0x000000011b4e9421 0 + 4753101857
4 ??? 0x000000011b500d28 0 + 4753198376
5 ??? 0x000000011b50165b 0 + 4753200731
6 ??? 0x000000011b5012c4 0 + 4753199812
7 ??? 0x000000011b558717 0 + 4753557271
8 ??? 0x00007fff20412950 0 + 140733734529360
9 ??? 0x00007fff2040e47b 0 + 140733734511739
Thread 7:: TaskSchedulerBackgroundWorker
0 ??? 0x00007fff203dde7e 0 + 140733734313598
1 ??? 0x00007fff203de1f0 0 + 140733734314480
2 ??? 0x000000011b4e932d 0 + 4753101613
3 ??? 0x000000011b4e9421 0 + 4753101857
4 ??? 0x000000011b500d28 0 + 4753198376
5 ??? 0x000000011b50165b 0 + 4753200731
6 ??? 0x000000011b501234 0 + 4753199668
7 ??? 0x000000011b558717 0 + 4753557271
8 ??? 0x00007fff20412950 0 + 140733734529360
9 ??? 0x00007fff2040e47b 0 + 140733734511739
Thread 8:: TaskSchedulerBackgroundBlockingWorker
0 ??? 0x00007fff203dde7e 0 + 140733734313598
1 ??? 0x00007fff203de1f0 0 + 140733734314480
2 ??? 0x000000011b4e932d 0 + 4753101613
3 ??? 0x000000011b4e9421 0 + 4753101857
4 ??? 0x000000011b500d28 0 + 4753198376
5 ??? 0x000000011b50165b 0 + 4753200731
6 ??? 0x000000011b501234 0 + 4753199668
7 ??? 0x000000011b558717 0 + 4753557271
8 ??? 0x00007fff20412950 0 + 140733734529360
9 ??? 0x00007fff2040e47b 0 + 140733734511739
Thread 9:: Chrome_IOThread
0 ??? 0x00007fff203e27e2 0 + 140733734332386
1 ??? 0x000000011b7a7cbd 0 + 4755979453
2 ??? 0x000000011b55ecc4 0 + 4753583300
3 ??? 0x000000011b4c6085 0 + 4752957573
4 ??? 0x000000011ae34fe4 0 + 4746072036
5 ??? 0x000000011b5189bc 0 + 4753295804
6 ??? 0x000000011b558717 0 + 4753557271
7 ??? 0x00007fff20412950 0 + 140733734529360
8 ??? 0x00007fff2040e47b 0 + 140733734511739
Thread 10:: TaskSchedulerSingleThreadSharedBackgroundBlocking0
0 ??? 0x00007fff203dde7e 0 + 140733734313598
1 ??? 0x00007fff203de1f0 0 + 140733734314480
2 ??? 0x000000011b4e932d 0 + 4753101613
3 ??? 0x000000011b4e922f 0 + 4753101359
4 ??? 0x000000011b500d1a 0 + 4753198362
5 ??? 0x000000011b5013bf 0 + 4753200063
6 ??? 0x000000011b501264 0 + 4753199716
7 ??? 0x000000011b558717 0 + 4753557271
8 ??? 0x00007fff20412950 0 + 140733734529360
9 ??? 0x00007fff2040e47b 0 + 140733734511739
Thread 11:: CompositorTileWorker1/57347
0 ??? 0x00007fff203e08e2 0 + 140733734324450
1 ??? 0x000000011b556fa8 0 + 4753551272
2 ??? 0x000000011c4dd4c8 0 + 4769830088
3 ??? 0x000000011b517694 0 + 4753290900
4 ??? 0x000000011b558717 0 + 4753557271
5 ??? 0x00007fff20412950 0 + 140733734529360
6 ??? 0x00007fff2040e47b 0 + 140733734511739
Thread 12:: AudioThread
0 ??? 0x00007fff203dde7e 0 + 140733734313598
1 ??? 0x00007fff203de1f0 0 + 140733734314480
2 ??? 0x000000011b4e932d 0 + 4753101613
3 ??? 0x000000011b4e922f 0 + 4753101359
4 ??? 0x000000011b49d05d 0 + 4752789597
5 ??? 0x000000011b4c6085 0 + 4752957573
6 ??? 0x000000011b5189bc 0 + 4753295804
7 ??? 0x000000011b558717 0 + 4753557271
8 ??? 0x00007fff20412950 0 + 140733734529360
9 ??? 0x00007fff2040e47b 0 + 140733734511739
Thread 13:: Chrome_InProcGpuThread
0 ??? 0x00007fff203dde7e 0 + 140733734313598
1 ??? 0x00007fff203de1f0 0 + 140733734314480
2 ??? 0x000000011b4e932d 0 + 4753101613
3 ??? 0x000000011b49d052 0 + 4752789586
4 ??? 0x000000011b4c6085 0 + 4752957573
5 ??? 0x000000011b5189bc 0 + 4753295804
6 ??? 0x000000011b558717 0 + 4753557271
7 ??? 0x00007fff20412950 0 + 140733734529360
8 ??? 0x00007fff2040e47b 0 + 140733734511739
Thread 14:: Chrome_ChildIOThread
0 ??? 0x00007fff203e27e2 0 + 140733734332386
1 ??? 0x000000011b7a7cbd 0 + 4755979453
2 ??? 0x000000011b55ecdc 0 + 4753583324
3 ??? 0x000000011b4c6085 0 + 4752957573
4 ??? 0x000000011b5189bc 0 + 4753295804
5 ??? 0x000000011b558717 0 + 4753557271
6 ??? 0x00007fff20412950 0 + 140733734529360
7 ??? 0x00007fff2040e47b 0 + 140733734511739
Thread 15:: NetworkConfigWatcher
0 ??? 0x00007fff203dde7e 0 + 140733734313598
1 ??? 0x00007fff203de1f0 0 + 140733734314480
2 ??? 0x000000011b4e932d 0 + 4753101613
3 ??? 0x000000011b4e922f 0 + 4753101359
4 ??? 0x000000011b49d05d 0 + 4752789597
5 ??? 0x000000011b4c6085 0 + 4752957573
6 ??? 0x000000011b5189bc 0 + 4753295804
7 ??? 0x000000011b558717 0 + 4753557271
8 ??? 0x00007fff20412950 0 + 140733734529360
9 ??? 0x00007fff2040e47b 0 + 140733734511739
Thread 16:: TaskSchedulerSingleThreadForegroundBlocking1
0 ??? 0x00007fff203dde7e 0 + 140733734313598
1 ??? 0x00007fff203de1f0 0 + 140733734314480
2 ??? 0x000000011b4e932d 0 + 4753101613
3 ??? 0x000000011b4e922f 0 + 4753101359
4 ??? 0x000000011b500d1a 0 + 4753198362
5 ??? 0x000000011b50165b 0 + 4753200731
6 ??? 0x000000011b501324 0 + 4753199908
7 ??? 0x000000011b558717 0 + 4753557271
8 ??? 0x00007fff20412950 0 + 140733734529360
9 ??? 0x00007fff2040e47b 0 + 140733734511739
Thread 17:: NetworkConfigWatcher
0 ??? 0x00007fff203dde7e 0 + 140733734313598
1 ??? 0x00007fff203de1f0 0 + 140733734314480
2 ??? 0x000000011b4e932d 0 + 4753101613
3 ??? 0x000000011b4e922f 0 + 4753101359
4 ??? 0x000000011b49d05d 0 + 4752789597
5 ??? 0x000000011b4c6085 0 + 4752957573
6 ??? 0x000000011b5189bc 0 + 4753295804
7 ??? 0x000000011b558717 0 + 4753557271
8 ??? 0x00007fff20412950 0 + 140733734529360
9 ??? 0x00007fff2040e47b 0 + 140733734511739
Thread 18:
0 ??? 0x00007fff203e08e2 0 + 140733734324450
1 ??? 0x0000000106688c3b 0 + 4402482235
2 ??? 0x00007fff20412950 0 + 140733734529360
3 ??? 0x00007fff2040e47b 0 + 140733734511739
Thread 19:
0 ??? 0x00007fff203e08e2 0 + 140733734324450
1 ??? 0x0000000106688c3b 0 + 4402482235
2 ??? 0x00007fff20412950 0 + 140733734529360
3 ??? 0x00007fff2040e47b 0 + 140733734511739
Thread 20:
0 ??? 0x00007fff203e08e2 0 + 140733734324450
1 ??? 0x0000000106688c3b 0 + 4402482235
2 ??? 0x00007fff20412950 0 + 140733734529360
3 ??? 0x00007fff2040e47b 0 + 140733734511739
Thread 21:
0 ??? 0x00007fff203e08e2 0 + 140733734324450
1 ??? 0x0000000106688c3b 0 + 4402482235
2 ??? 0x00007fff20412950 0 + 140733734529360
3 ??? 0x00007fff2040e47b 0 + 140733734511739
Thread 22:
0 ??? 0x00007fff203e08e2 0 + 140733734324450
1 ??? 0x0000000106688c3b 0 + 4402482235
2 ??? 0x00007fff20412950 0 + 140733734529360
3 ??? 0x00007fff2040e47b 0 + 140733734511739
Thread 23:
0 ??? 0x00007fff2040e458 0 + 140733734511704
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000001 rbx: 0x0000000000000046 rcx: 0x000000010cac8eac rdx: 0x0000000000000000
rdi: 0x0000000000000002 rsi: 0x00007faaa808f930 rbp: 0x00007faaa808f980 rsp: 0x00007faaa808f910
r8: 0x00007faaa808ff48 r9: 0xae0cac9c77239313 r10: 0x000000010cac8eac r11: 0x0000000000000206
r12: 0x0000000000000056 r13: 0x00007faaa808f940 r14: 0x0000000104f4f1c0 r15: 0x0000000000000001
rip: 0x0000000104e658b1 rfl: 0x0000000000010206 cr2: 0x0000000104e658b1
Logical CPU: 4
Error Code: 0x00000014 (no mapping for user instruction read)
Trap Number: 14
Thread 0 instruction stream not available.
Thread 0 last branch register state not available.
Binary Images:
0 - 0xffffffffffffffff +ChimeraX (???) /private/var/folders/*/ChimeraX-1.1.1.app/Contents/MacOS/ChimeraX
0x10c9f1000 - 0x10ca8cfff dyld (832.7.3) /usr/lib/dyld
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 11
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 8246
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=848K resident=0K(0%) swapped_out_or_unallocated=848K(100%)
Writable regions: Total=1.7G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=1.7G(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 256K 2
Activity Tracing 256K 1
CG backing stores 4608K 6
CG image 284K 18
CoreAnimation 172K 20
CoreGraphics 12K 2
CoreUI image data 4280K 32
Foundation 16K 1
Kernel Alloc Once 1452K 6
MALLOC 310.2M 63
MALLOC guard page 48K 10
MALLOC_MEDIUM (reserved) 680.0M 6 reserved VM address space (unallocated)
MALLOC_NANO (reserved) 384.0M 1 reserved VM address space (unallocated)
OpenGL GLSL 512K 6
STACK GUARD 92K 23
Stack 139.7M 24
Stack Guard 56.0M 1
VM_ALLOCATE 155.9M 331
VM_ALLOCATE (reserved) 96.0M 2 reserved VM address space (unallocated)
__DATA 224K 2
__DATA_CONST 32K 1
__LINKEDIT 240K 2
__TEXT 624K 1
dylib 1736K 26
dylib (reserved) 64K 5 reserved VM address space (unallocated)
mapped file 353.4M 443
shared memory 48K 6
=========== ======= =======
TOTAL 2.1G 1041
TOTAL, minus reserved VM space 1.0G 1041
Log:
UCSF ChimeraX version: 1.1.1 (2020-10-07)
© 2016-2020 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 ATI-4.2.15
OpenGL renderer: AMD Radeon Pro 560X OpenGL Engine
OpenGL vendor: ATI Technologies Inc.Hardware:
Hardware Overview:
Model Name: iMac
Model Identifier: iMac19,2
Processor Name: 6-Core Intel Core i5
Processor Speed: 3 GHz
Number of Processors: 1
Total Number of Cores: 6
L2 Cache (per Core): 256 KB
L3 Cache: 9 MB
Memory: 32 GB
System Firmware Version: 1554.80.3.0.0
SMC Version (system): 2.47f3
Software:
System Software Overview:
System Version: macOS 11.2.1 (20D75)
Kernel Version: Darwin 20.3.0
Time since boot: 2:07
Graphics/Displays:
Radeon Pro 560X:
Chipset Model: Radeon Pro 560X
Type: GPU
Bus: PCIe
PCIe Lane Width: x8
VRAM (Total): 4 GB
Vendor: AMD (0x1002)
Device ID: 0x67ef
Revision ID: 0x00c2
ROM Revision: 113-C981AA-042
VBIOS Version: 113-C9819A1X-009
EFI Driver Version: 01.B1.042
Metal Family: Supported, Metal GPUFamily macOS 2
Displays:
iMac:
Display Type: Built-In Retina LCD
Resolution: 4096 x 2304 Retina
Framebuffer Depth: 30-Bit Color (ARGB2101010)
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: Yes
Connection Type: Internal
PyQt version: 5.12.3
Compiled Qt version: 5.12.4
Runtime Qt version: 5.12.9
Installed Packages:
alabaster: 0.7.12
appdirs: 1.4.4
appnope: 0.1.0
Babel: 2.8.0
backcall: 0.2.0
blockdiag: 2.0.1
certifi: 2020.6.20
chardet: 3.0.4
ChimeraX-AddH: 2.1.3
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.1
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.6.1
ChimeraX-AtomSearch: 2.0
ChimeraX-AxesPlanes: 2.0
ChimeraX-BasicActions: 1.1
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 1.0.1
ChimeraX-BondRot: 2.0
ChimeraX-BugReporter: 1.0
ChimeraX-BuildStructure: 2.0
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.0
ChimeraX-ButtonPanel: 1.0
ChimeraX-CageBuilder: 1.0
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.1
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.0
ChimeraX-ColorActions: 1.0
ChimeraX-ColorGlobe: 1.0
ChimeraX-CommandLine: 1.1.3
ChimeraX-ConnectStructure: 2.0
ChimeraX-Contacts: 1.0
ChimeraX-Core: 1.1.1
ChimeraX-CoreFormats: 1.0
ChimeraX-coulombic: 1.0.1
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-DataFormats: 1.0
ChimeraX-Dicom: 1.0
ChimeraX-DistMonitor: 1.1
ChimeraX-DistUI: 1.0
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0
ChimeraX-FunctionKey: 1.0
ChimeraX-Geometry: 1.1
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.0
ChimeraX-Hbonds: 2.0
ChimeraX-Help: 1.0
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.0
ChimeraX-ImageFormats: 1.0
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0
ChimeraX-Label: 1.0
ChimeraX-ListInfo: 1.0
ChimeraX-Log: 1.1.1
ChimeraX-LookingGlass: 1.1
ChimeraX-Map: 1.0.1
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.0
ChimeraX-Markers: 1.0
ChimeraX-Mask: 1.0
ChimeraX-MatchMaker: 1.1
ChimeraX-MDcrds: 2.0
ChimeraX-MedicalToolbar: 1.0.1
ChimeraX-Meeting: 1.0
ChimeraX-MLP: 1.0
ChimeraX-mmCIF: 2.2
ChimeraX-MMTF: 2.0
ChimeraX-Modeller: 1.0
ChimeraX-ModelPanel: 1.0
ChimeraX-ModelSeries: 1.0
ChimeraX-Mol2: 2.0
ChimeraX-Morph: 1.0
ChimeraX-MouseModes: 1.0
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0
ChimeraX-OpenCommand: 1.2.1
ChimeraX-PDB: 2.1
ChimeraX-PDBBio: 1.0
ChimeraX-PickBlobs: 1.0
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.0
ChimeraX-PubChem: 2.0
ChimeraX-Read-Pbonds: 1.0
ChimeraX-Registration: 1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-ResidueFit: 1.0
ChimeraX-RestServer: 1.0
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.2
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SeqView: 2.2
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0
ChimeraX-Shortcuts: 1.0
ChimeraX-ShowAttr: 1.0
ChimeraX-ShowSequences: 1.0
ChimeraX-SideView: 1.0
ChimeraX-Smiles: 2.0
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.0.4
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-Struts: 1.0
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0
ChimeraX-SwapRes: 2.0
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.0
ChimeraX-ToolshedUtils: 1.0
ChimeraX-Tug: 1.0
ChimeraX-UI: 1.2.3
ChimeraX-uniprot: 2.0
ChimeraX-ViewDockX: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0
ChimeraX-WebServices: 1.0
ChimeraX-Zone: 1.0
colorama: 0.4.3
comtypes: 1.1.7
cxservices: 1.0
cycler: 0.10.0
Cython: 0.29.20
decorator: 4.4.2
distlib: 0.3.1
docutils: 0.16
filelock: 3.0.12
funcparserlib: 0.3.6
grako: 3.16.5
h5py: 2.10.0
html2text: 2020.1.16
idna: 2.10
ihm: 0.16
imagecodecs: 2020.5.30
imagecodecs-lite: 2020.1.31
imagesize: 1.2.0
ipykernel: 5.3.0
ipython: 7.15.0
ipython-genutils: 0.2.0
jedi: 0.17.2
Jinja2: 2.11.2
jupyter-client: 6.1.3
jupyter-core: 4.6.3
kiwisolver: 1.2.0
line-profiler: 2.1.2
lxml: 4.5.1
MarkupSafe: 1.1.1
matplotlib: 3.2.1
msgpack: 1.0.0
netifaces: 0.10.9
networkx: 2.4
numexpr: 2.7.1
numpy: 1.18.5
numpydoc: 1.0.0
openvr: 1.12.501
packaging: 20.4
parso: 0.7.1
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 7.1.2
pip: 20.2.2
pkginfo: 1.5.0.1
prompt-toolkit: 3.0.7
psutil: 5.7.0
ptyprocess: 0.6.0
pycollada: 0.7.1
pydicom: 2.0.0
Pygments: 2.6.1
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 2.4.7
PyQt5-commercial: 5.12.3
PyQt5-sip: 4.19.19
PyQtWebEngine-commercial: 5.12.1
python-dateutil: 2.8.1
pytz: 2020.1
pyzmq: 19.0.2
qtconsole: 4.7.4
QtPy: 1.9.0
RandomWords: 0.3.0
requests: 2.24.0
scipy: 1.4.1
setuptools: 49.4.0
sfftk-rw: 0.6.6.dev0
six: 1.15.0
snowballstemmer: 2.0.0
sortedcontainers: 2.2.2
Sphinx: 3.1.1
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 2.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 1.0.3
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.4
suds-jurko: 0.6
tables: 3.6.1
tifffile: 2020.6.3
tinyarray: 1.2.2
tornado: 6.0.4
traitlets: 5.0.4
urllib3: 1.25.10
wcwidth: 0.2.5
webcolors: 1.11.1
wheel: 0.34.2
Change History (2)
comment:1 by , 5 years ago
| Cc: | added |
|---|---|
| Component: | Unassigned → Core |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → accepted |
| Summary: | ChimeraX bug report submission → Crash with trashed stack |
comment:2 by , 5 years ago
| Status: | accepted → feedback |
|---|
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Hi Marco,
--Eric