Opened 5 years ago

Closed 4 years ago

#3862 closed defect (can't reproduce)

Tracebacks when exiting on Windows during meeting

Reported by: goddard@… Owned by: Tom Goddard
Priority: normal Milestone:
Component: Core Version:
Keywords: Cc:
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description 

The following bug report has been submitted:
Platform:        Windows-10-10.0.19041
ChimeraX Version: 1.2.dev202010160427 (2020-10-16 04:27:26 UTC)
Description
Exiting from ChimeraX on Windows by pressing the window close button spews various errors to the shell.  This case was where a meeting had been started and one participant was connected and a pointer was shown.

$ cx
Unable to load numpy_formathandler accelerator from OpenGL_accelerate
WARNING: No statusbar messages will be shown due to inadequate OpenGL
WARNING: Release of profile requested but WebEnginePage still not deleted. Expec
t troubles !
WARNING: Release of profile requested but WebEnginePage still not deleted. Expec
t troubles !
WARNING: Release of profile requested but WebEnginePage still not deleted. Expec
t troubles !
NOTE: Disconnected from ::1:57262
NOTE: Traceback (most recent call last):  
  File "C:\cygwin64\home\goddard\ucsf\chimerax\ChimeraX.app\bin\lib\site-       
packages\chimerax\core\triggerset.py", line 130, in invoke
    return self._func(self._name, data)
  File "C:\cygwin64\home\goddard\ucsf\chimerax\ChimeraX.app\bin\lib\site-       
packages\chimerax\ui\gui.py", line 741, in _check_rapid_access
    self.rapid_access_shown = len(self.session.models) == 0
  File "C:\cygwin64\home\goddard\ucsf\chimerax\ChimeraX.app\bin\lib\site-       
packages\chimerax\ui\gui.py", line 720, in rapid_access_shown
    if show == (self._stack.currentWidget() == self.rapid_access):
RuntimeError: wrapped C/C++ object of type GraphicsArea has been deleted        


BUG: Error processing trigger "remove models":
RuntimeError: wrapped C/C++ object of type GraphicsArea has been deleted        

File "C:\cygwin64\home\goddard\ucsf\chimerax\ChimeraX.app\bin\lib\site-
packages\chimerax\ui\gui.py", line 720, in rapid_access_shown
if show == (self._stack.currentWidget() == self.rapid_access):

 _See log for complete Python traceback._


NOTE: Traceback (most recent call last):
  File "C:\cygwin64\home\goddard\ucsf\chimerax\ChimeraX.app\bin\lib\site-       
packages\chimerax\meeting\meeting.py", line 800, in _socket_disconnected        
    self._disconnected_cb(self)
  File "C:\cygwin64\home\goddard\ucsf\chimerax\ChimeraX.app\bin\lib\site-       
packages\chimerax\meeting\meeting.py", line 577, in _disconnected
    self._send_message(msg)
  File "C:\cygwin64\home\goddard\ucsf\chimerax\ChimeraX.app\bin\lib\site-       
packages\chimerax\meeting\meeting.py", line 568, in _send_message
    msg_stream.send_message_bytes(msg_bytes)
  File "C:\cygwin64\home\goddard\ucsf\chimerax\ChimeraX.app\bin\lib\site-       
packages\chimerax\meeting\meeting.py", line 817, in send_message_bytes
    self._send_message_cb(msg, self)
  File "C:\cygwin64\home\goddard\ucsf\chimerax\ChimeraX.app\bin\lib\site-       
packages\chimerax\meeting\meeting.py", line 400, in _message_received
    self._participant_left(msg)
  File "C:\cygwin64\home\goddard\ucsf\chimerax\ChimeraX.app\bin\lib\site-       
packages\chimerax\meeting\meeting.py", line 413, in _participant_left
    t.remove_model(participant_id)
  File "C:\cygwin64\home\goddard\ucsf\chimerax\ChimeraX.app\bin\lib\site-       
packages\chimerax\meeting\meeting.py", line 865, in remove_model
    self._session.models.close([m])
  File "C:\cygwin64\home\goddard\ucsf\chimerax\ChimeraX.app\bin\lib\site-       
packages\chimerax\core\models.py", line 891, in close
    m.delete()
  File "C:\cygwin64\home\goddard\ucsf\chimerax\ChimeraX.app\bin\lib\site-       
packages\chimerax\core\models.py", line 95, in delete
    Drawing.delete(self)
  File "C:\cygwin64\home\goddard\ucsf\chimerax\ChimeraX.app\bin\lib\site-       
packages\chimerax\graphics\drawing.py", line 1197, in delete
    c.make_current() # Make OpenGL context current for deleting OpenGL
resources.
  File "C:\cygwin64\home\goddard\ucsf\chimerax\ChimeraX.app\bin\lib\site-       
packages\chimerax\graphics\opengl.py", line 139, in make_current
    if not qc.makeCurrent(w):
RuntimeError: wrapped C/C++ object of type QOpenGLContext has been deleted      


BUG: RuntimeError: wrapped C/C++ object of type QOpenGLContext has been deleted 


File "C:\cygwin64\home\goddard\ucsf\chimerax\ChimeraX.app\bin\lib\site-
packages\chimerax\graphics\opengl.py", line 139, in make_current
if not qc.makeCurrent(w):

 _See log for complete Python traceback._


$ 

Log:
UCSF ChimeraX version: 1.2.dev202010160427 (2020-10-16)  
© 2016-2020 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> meeting localhost

Log from Wed Oct 21 22:25:17 2020UCSF ChimeraX version: 1.2.dev202010140148
(2020-10-14)  
© 2016-2020 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open 1a0m format mmcif fromDatabase pdb

1a0m title:  
1.1 angstrom crystal structure of A-conotoxin [TYR15]-epi [more info...]  
  
Chain information for 1a0m #1  
---  
Chain | Description  
A B | α-conotoxin [TYR15]-epi  
  
Non-standard residues in 1a0m #1  
---  
NH2 — amino group  
  

> meeting start

Meeting at DESKTOP-J8FC2Q4 or 192.168.0.2 port 52194  

——— End of log from Wed Oct 21 22:25:17 2020 ———

Socket error The remote host closed the connection  
Disconnected from ::1:52194  




OpenGL version: 3.3.0 NVIDIA 442.19
OpenGL renderer: GeForce GTX 1080 Ti/PCIe/SSE2
OpenGL vendor: NVIDIA Corporation
Manufacturer: Gigabyte Technology Co., Ltd.
Model: Z270X-Gaming K7
OS: Microsoft Windows 10 Home (Build 19041)
Memory: 17,129,693,184
MaxProcessMemory: 137,438,953,344
CPU: 8 Intel(R) Core(TM) i7-7700K CPU @ 4.20GHz
OSLanguage: en-US
Locale: ('en_US', 'cp1252')
PyQt version: 5.15.1
Compiled Qt version: 5.15.1
Runtime Qt version: 5.15.1
Installed Packages:
    alabaster: 0.7.12
    appdirs: 1.4.4
    Babel: 2.8.0
    backcall: 0.2.0
    blockdiag: 2.0.1
    certifi: 2020.6.20
    cftime: 1.2.1
    chardet: 3.0.4
    ChimeraX-AddH: 2.1.1
    ChimeraX-AlignmentAlgorithms: 2.0
    ChimeraX-AlignmentHdrs: 3.2
    ChimeraX-AlignmentMatrices: 2.0
    ChimeraX-Alignments: 2.1
    ChimeraX-Arrays: 1.0
    ChimeraX-Atomic: 1.8.2
    ChimeraX-AtomicLibrary: 1.1
    ChimeraX-AtomSearch: 2.0
    ChimeraX-AtomSearchLibrary: 1.0
    ChimeraX-AxesPlanes: 2.0
    ChimeraX-BasicActions: 1.1
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 1.1
    ChimeraX-BondRot: 2.0
    ChimeraX-BugReporter: 1.0
    ChimeraX-BuildStructure: 2.2
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.0
    ChimeraX-ButtonPanel: 1.0
    ChimeraX-CageBuilder: 1.0
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.1
    ChimeraX-ChemGroup: 2.0
    ChimeraX-Clashes: 2.1
    ChimeraX-ColorActions: 1.0
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-CommandLine: 1.1.3
    ChimeraX-ConnectStructure: 2.0
    ChimeraX-Contacts: 1.0
    ChimeraX-Core: 1.2.dev202010160427
    ChimeraX-CoreFormats: 1.0
    ChimeraX-coulombic: 1.0.1
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-DataFormats: 1.0
    ChimeraX-Dicom: 1.0
    ChimeraX-DistMonitor: 1.1
    ChimeraX-DistUI: 1.0
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ExperimentalCommands: 1.0
    ChimeraX-FileHistory: 1.0
    ChimeraX-FunctionKey: 1.0
    ChimeraX-Geometry: 1.1
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.0
    ChimeraX-Hbonds: 2.1
    ChimeraX-Help: 1.0
    ChimeraX-HKCage: 1.0
    ChimeraX-IHM: 1.0
    ChimeraX-ImageFormats: 1.1
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0
    ChimeraX-Label: 1.0
    ChimeraX-ListInfo: 1.1
    ChimeraX-Log: 1.1.1
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Map: 1.0.1
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0
    ChimeraX-MapFilter: 2.0
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.0
    ChimeraX-Markers: 1.0
    ChimeraX-Mask: 1.0
    ChimeraX-MatchMaker: 1.1
    ChimeraX-MDcrds: 2.1
    ChimeraX-MedicalToolbar: 1.0.1
    ChimeraX-Meeting: 1.0
    ChimeraX-MLP: 1.0
    ChimeraX-mmCIF: 2.2
    ChimeraX-MMTF: 2.0
    ChimeraX-Modeller: 1.0
    ChimeraX-ModelPanel: 1.0
    ChimeraX-ModelSeries: 1.0
    ChimeraX-Mol2: 2.0
    ChimeraX-Morph: 1.0
    ChimeraX-MouseModes: 1.0
    ChimeraX-Movie: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nucleotides: 2.0
    ChimeraX-OpenCommand: 1.3
    ChimeraX-PDB: 2.2
    ChimeraX-PDBBio: 1.0
    ChimeraX-PDBLibrary: 1.0
    ChimeraX-PickBlobs: 1.0
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.0
    ChimeraX-PubChem: 2.0.1
    ChimeraX-Read-Pbonds: 1.0
    ChimeraX-Registration: 1.1
    ChimeraX-RemoteControl: 1.0
    ChimeraX-ResidueFit: 1.0
    ChimeraX-RestServer: 1.1
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 2.0
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.2
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0
    ChimeraX-SeqView: 2.2.1
    ChimeraX-Shape: 1.0.1
    ChimeraX-Shell: 1.0
    ChimeraX-Shortcuts: 1.0
    ChimeraX-ShowAttr: 1.0
    ChimeraX-ShowSequences: 1.0
    ChimeraX-SideView: 1.0
    ChimeraX-Smiles: 2.0.1
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.1
    ChimeraX-STL: 1.0
    ChimeraX-Storm: 1.0
    ChimeraX-Struts: 1.0
    ChimeraX-Surface: 1.0
    ChimeraX-SwapAA: 2.0
    ChimeraX-SwapRes: 2.0
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.0
    ChimeraX-ToolshedUtils: 1.0
    ChimeraX-Tug: 1.0
    ChimeraX-UI: 1.3.1
    ChimeraX-uniprot: 2.0
    ChimeraX-ViewDockX: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0
    ChimeraX-WebServices: 1.0
    ChimeraX-Zone: 1.0
    colorama: 0.4.3
    comtypes: 1.1.7
    cxservices: 1.0
    cycler: 0.10.0
    Cython: 0.29.21
    decorator: 4.4.2
    distlib: 0.3.1
    docutils: 0.16
    filelock: 3.0.12
    funcparserlib: 0.3.6
    grako: 3.16.5
    h5py: 2.10.0
    html2text: 2020.1.16
    idna: 2.10
    ihm: 0.17
    imagecodecs: 2020.5.30
    imagecodecs-lite: 2020.1.31
    imagesize: 1.2.0
    ipykernel: 5.3.4
    ipython: 7.18.1
    ipython-genutils: 0.2.0
    jedi: 0.17.2
    Jinja2: 2.11.2
    jupyter-client: 6.1.7
    jupyter-core: 4.6.3
    kiwisolver: 1.2.0
    line-profiler: 2.1.2
    lxml: 4.5.2
    MarkupSafe: 1.1.1
    matplotlib: 3.3.2
    msgpack: 1.0.0
    netCDF4: 1.5.4
    netifaces: 0.10.9
    networkx: 2.5
    numexpr: 2.7.1
    numpy: 1.19.2
    numpydoc: 1.1.0
    openvr: 1.14.1501
    packaging: 20.4
    parso: 0.7.1
    pickleshare: 0.7.5
    Pillow: 7.2.0
    pip: 20.2.3
    pkginfo: 1.5.0.1
    prompt-toolkit: 3.0.8
    psutil: 5.7.2
    pycollada: 0.7.1
    pydicom: 2.0.0
    Pygments: 2.7.1
    PyOpenGL: 3.1.5
    PyOpenGL-accelerate: 3.1.5
    pyparsing: 2.4.7
    PyQt5-commercial: 5.15.1
    PyQt5-sip: 12.8.1
    PyQtWebEngine-commercial: 5.15.1
    python-dateutil: 2.8.1
    pytz: 2020.1
    pywin32: 228
    pyzmq: 19.0.2
    qtconsole: 4.7.7
    QtPy: 1.9.0
    RandomWords: 0.3.0
    requests: 2.24.0
    scipy: 1.5.2
    setuptools: 50.3.0
    sfftk-rw: 0.6.6.dev0
    six: 1.15.0
    snowballstemmer: 2.0.0
    sortedcontainers: 2.2.2
    Sphinx: 3.2.1
    sphinxcontrib-applehelp: 1.0.2
    sphinxcontrib-blockdiag: 2.0.0
    sphinxcontrib-devhelp: 1.0.2
    sphinxcontrib-htmlhelp: 1.0.3
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 1.0.3
    sphinxcontrib-serializinghtml: 1.1.4
    suds-jurko: 0.6
    tables: 3.6.1
    tifffile: 2020.9.3
    tinyarray: 1.2.3
    tornado: 6.0.4
    traitlets: 5.0.5
    urllib3: 1.25.10
    wcwidth: 0.2.5
    webcolors: 1.11.1
    wheel: 0.34.2
    WMI: 1.5.1

Change History (3)

comment:1 by Tom Goddard, 5 years ago

Component: Unassigned → Core
Owner: set to Tom Goddard
Platform: → all
Project: → ChimeraX
Status: new → assigned
Summary: ChimeraX bug report submission → Tracebacks on when exiting on Windows

Appears that the tracebacks are from models being closed after the gui is gone.

comment:2 by Tom Goddard, 5 years ago

Summary: Tracebacks on when exiting on Windows → Tracebacks when exiting on Windows during meeting

comment:3 by Tom Goddard, 4 years ago

Resolution: → can't reproduce
Status: assigned → closed

Have not seen this again.

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