Opened 6 years ago

Closed 6 years ago

Last modified 6 years ago

#1963 closed defect (duplicate)

Preset manager needed by session

Reported by: hyl5126@… Owned by: pett
Priority: normal Milestone:
Component: Sessions Version:
Keywords: Cc:
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description 

The following bug report has been submitted:
Platform:        Linux-3.16.0-7-amd64-x86_64-with-debian-8.10
ChimeraX Version: 0.7 (2018-08-07)
Description
Opening a saved session. (Describe the actions that caused this problem to occur here)

Log:
Startup Errors  
---  
error | Error preloading available bundles:  
AttributeError: 'list' object has no attribute 'split'  
  
File "/opt/chimerax/0.7/lib/python3.6/site-  
packages/chimerax/core/toolshed/installed.py", line 292, in  
_extract_extra_keywords  
all_kwds = [k.strip() for k in kwds.split(',')]  
  
_See log for complete Python traceback._  
  
If you wish to report this error, send mail to [chimerax-  
bugs@cgl.ucsf.edu](mailto:chimerax-bugs@cgl.ucsf.edu) and describe what you  
were doing and include a copy of the contents of the log. Don't include any  
data you wish to remain private since a publicly viewable bug report will be  
created.  
note | Traceback (most recent call last):  
File "/opt/chimerax/0.7/lib/python3.6/site-  
packages/chimerax/core/toolshed/__init__.py", line 337, in __init__  
self.init_available_from_cache(logger)  
File "/opt/chimerax/0.7/lib/python3.6/site-  
packages/chimerax/core/toolshed/__init__.py", line 444, in  
init_available_from_cache  
abc.load_from_cache()  
File "/opt/chimerax/0.7/lib/python3.6/site-  
packages/chimerax/core/toolshed/available.py", line 61, in load_from_cache  
b = _build_bundle(d)  
File "/opt/chimerax/0.7/lib/python3.6/site-  
packages/chimerax/core/toolshed/available.py", line 242, in _build_bundle  
keywords = _extract_extra_keywords(keywords)  
File "/opt/chimerax/0.7/lib/python3.6/site-  
packages/chimerax/core/toolshed/installed.py", line 292, in  
_extract_extra_keywords  
all_kwds = [k.strip() for k in kwds.split(',')]  
AttributeError: 'list' object has no attribute 'split'  
  
UCSF ChimeraX version: 0.7 (2018-08-07)  
OpenGL version: 3.3.0 NVIDIA 390.48  
OpenGL renderer: TITAN Xp/PCIe/SSE2  
OpenGL vendor: NVIDIA Corporation  
How to cite UCSF ChimeraX  

open /home/hyl5126/OneDrive/Workspace/CPV_TfR/Chimera/image232.cxs format
session

File not found: /home/hyl5126/OneDrive/Workspace/CPV_TfR/Chimera/image232.cxs  

open /home/hyl5126/OneDrive/Workspace/CPV_TfR/Chimera/image230.cxs format
session

File not found: /home/hyl5126/OneDrive/Workspace/CPV_TfR/Chimera/image230.cxs  

open /home/hyl5126/OneDrive/Workspace/CPV_TfR/Chimera/Figure7b.cxs

File not found: /home/hyl5126/OneDrive/Workspace/CPV_TfR/Chimera/Figure7b.cxs  

open /home/hyl5126/OneDrive/Workspace/CPV_TfR/Chimera/Figure7d.cxs

Unable to restore all of session; missing bundle: ChimeraX-Preset-Mgr  

Unable to restore all of session; missing bundle: ChimeraX-Preset-Mgr  




OpenGL version: 3.3.0 NVIDIA 390.48
OpenGL renderer: TITAN Xp/PCIe/SSE2
OpenGL vendor: NVIDIA Corporation

Change History (3)

comment:1 by pett, 6 years ago

Component: Unassigned → Sessions
Owner: set to pett
Platform: → all
Project: → ChimeraX
Status: new → accepted
Summary: ChimeraX bug report submission → Preset manager needed by session

comment:2 by pett, 6 years ago

Resolution: → duplicate
Status: accepted → closed

Hi Hyunwook,

We will work to address this issue. Your session file must have been saved by a newer version of ChimeraX than the one you tried to restore it with. So the easiest fix is to upgrade to the 0.9 release candidate. The session should work fine there.

--Eric

Eric Pettersen
UCSF Computer Graphics Lab

in reply to:  3 ; comment:3 by hyl5126@…, 6 years ago 

Thank you Eric. I'll try it.

Hyunwook

On 5/23/19 1:44 PM, ChimeraX wrote:
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