Opened 7 years ago

Closed 2 years ago

#1770 closed enhancement (fixed)

Add command to create pseudobonds.

Reported by: Tom Goddard Owned by: Tom Goddard
Priority: moderate Milestone:
Component: Structure Editing Version:
Keywords: Cc: Eric Pettersen, Elaine Meng
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description (last modified by Eric Pettersen)

Should have a command for creating pseudobonds, setting their color and radius, for people wanting to add some crosslinks. Currently we recommend using the distance command, not ideal.

http://plato.cgl.ucsf.edu/pipermail/chimera-users/2019-March/015519.html

Change History (2)

comment:1 by Eric Pettersen, 7 years ago

Cc: Elaine Meng added

Well, that report was for Chimera. ChimeraX has the capability to read .pb files, which also could be enhanced in similar fashion to support more pseudobond attributes. But that isn't to say that there _shouldn't_ be a command to create pseudobonds directly -- just saying that there is already more support in ChimeraX than there is in Chimera.

comment:2 by Eric Pettersen, 2 years ago

Description: modified (diff)
Resolution: fixed
Status: assignedclosed

Added a pseudobond/pbond command. Now in the Elaine shakedown/negotiation phase. :-)

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