![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 17 months ago
Closed 17 months ago
#15282 closed defect (nonchimerax)
Graphics crash, macOS 10.15.7, Intel HD Graphics 4000
| Reported by: | Owned by: | Tom Goddard | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Graphics | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: macOS-10.15.7-x86_64-i386-64bit
ChimeraX Version: 1.7.1 (2024-01-23 01:58:08 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Fatal Python error: Aborted
Thread 0x000070000b8c5000 (most recent call first):
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 324 in wait
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 622 in wait
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 1392 in run
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 1038 in _bootstrap_inner
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 995 in _bootstrap
Current thread 0x000000010ec91dc0 (most recent call first):
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/OpenGL/GL/VERSION/GL_1_5.py", line 125 in glBufferSubData
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/opengl.py", line 2744 in update_buffer_data
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/drawing.py", line 1912 in update_buffers
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/drawing.py", line 1924 in activate_bindings
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/drawing.py", line 814 in _draw_geometry
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/drawing.py", line 794 in draw_self
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/drawing.py", line 780 in draw
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/drawing.py", line 1567 in _draw_multiple
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/drawing.py", line 1624 in draw_highlight_outline
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/view.py", line 272 in _draw_scene
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/view.py", line 188 in draw
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/updateloop.py", line 84 in draw_new_frame
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/updateloop.py", line 150 in _redraw_timer_callback
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/ui/gui.py", line 275 in event_loop
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/__main__.py", line 918 in init
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/__main__.py", line 1069 in
File "", line 88 in _run_code
File "", line 198 in _run_module_as_main
Extension modules: chimerax.arrays._arrays, numpy.core._multiarray_umath, numpy.core._multiarray_tests, numpy.linalg._umath_linalg, numpy.fft._pocketfft_internal, numpy.random._common, numpy.random.bit_generator, numpy.random._bounded_integers, numpy.random._mt19937, numpy.random.mtrand, numpy.random._philox, numpy.random._pcg64, numpy.random._sfc64, numpy.random._generator, chimerax.geometry._geometry, PyQt6.QtCore, PyQt6.QtGui, PyQt6.QtWidgets, PyQt6.QtWebChannel, PyQt6.QtNetwork, PyQt6.QtWebEngineCore, PyQt6.QtPrintSupport, PyQt6.QtWebEngineWidgets, chimerax.atomic_lib._load_libs, tinyarray, chimerax.atomic.cymol, chimerax.atomic.cytmpl, chimerax.surface._surface, chimerax.pdb_lib._load_libs, chimerax.map._map, charset_normalizer.md, PIL._imaging, matplotlib._c_internal_utils, matplotlib._path, kiwisolver._cext, matplotlib._image, PyQt6.QtOpenGL, PyQt6.QtOpenGLWidgets, OpenGL_accelerate.errorchecker, OpenGL_accelerate.wrapper, OpenGL_accelerate.formathandler, OpenGL_accelerate.arraydatatype, OpenGL_accelerate.latebind, OpenGL_accelerate.vbo, chimerax.core._mac_util, OpenGL_accelerate.numpy_formathandler, OpenGL_accelerate.nones_formathandler, tables._comp_lzo, tables._comp_bzip2, tables.utilsextension, numexpr.interpreter, tables.hdf5extension, tables.linkextension, tables.lrucacheextension, tables.tableextension, tables.indexesextension, chimerax.segment._segment (total: 57)
Process: ChimeraX [3604]
Path: /Applications/ChimeraX-1.7.1.app/Contents/MacOS/ChimeraX
Identifier: ChimeraX
Version: 1.7.1 (1.7.1.0)
Code Type: X86-64 (Native)
Parent Process: ??? [1]
Responsible: ChimeraX [3604]
User ID: 502
Date/Time: 2024-05-23 11:48:25.626 +0200
OS Version: Mac OS X 10.15.7 (19H2026)
Report Version: 12
Anonymous UUID: C36A5D95-D95B-63C3-12EE-675B9CE924F6
Sleep/Wake UUID: B15142D9-C094-4800-81ED-F67894DAFB1E
Time Awake Since Boot: 4100000 seconds
Time Since Wake: 760000 seconds
System Integrity Protection: enabled
Crashed Thread: 0 CrBrowserMain Dispatch queue: com.apple.main-thread
Exception Type: EXC_CRASH (SIGABRT)
Exception Codes: 0x0000000000000000, 0x0000000000000000
Exception Note: EXC_CORPSE_NOTIFY
Application Specific Information:
abort() called
Application Specific Signatures:
Graphics hardware encountered an error and was reset: 0x00008013
Thread 0 Crashed:: CrBrowserMain Dispatch queue: com.apple.main-thread
0 libsystem_kernel.dylib 0x00007fff6e6b532a __pthread_kill + 10
1 libsystem_pthread.dylib 0x00007fff6e775e60 pthread_kill + 430
2 libsystem_c.dylib 0x00007fff6e5cc93e raise + 26
3 org.python.python 0x00000001061695d4 faulthandler_fatal_error + 388
4 libsystem_platform.dylib 0x00007fff6e76a5fd _sigtramp + 29
5 ??? 000000000000000000 0 + 0
6 libsystem_c.dylib 0x00007fff6e63c808 abort + 120
7 libGPUSupportMercury.dylib 0x00007fff55b150a5 gpusGenerateCrashLog.cold.1 + 95
8 libGPUSupportMercury.dylib 0x00007fff55b0c18f gpusGenerateCrashLog + 89
9 com.apple.driver.AppleIntelHD4000GraphicsGLDriver 0x00007fff2a732dd0 gpusKillClientExt + 9
10 libGPUSupportMercury.dylib 0x00007fff55b0d6a1 gpusSubmitDataBuffers + 490
11 com.apple.driver.AppleIntelHD4000GraphicsGLDriver 0x00007fff2a308c78 IntelCommandBuffer::getNew(GLDContextRec*) + 48
12 com.apple.driver.AppleIntelHD4000GraphicsGLDriver 0x00007fff2a308aa6 intelSubmitCommands + 187
13 com.apple.driver.AppleIntelHD4000GraphicsGLDriver 0x00007fff2a30da97 glrWriteBufferData + 281
14 GLEngine 0x00007fff3f37bd6c glBufferSubData_Exec + 608
15 libffi.dylib 0x00007fff6c318905 ffi_call_unix64 + 85
16 libffi.dylib 0x00007fff6c318244 ffi_call_int + 694
17 _ctypes.cpython-311-darwin.so 0x000000010df50336 _ctypes_callproc + 678
18 _ctypes.cpython-311-darwin.so 0x000000010df4a9eb PyCFuncPtr_call + 267
19 org.python.python 0x0000000105f9836b _PyObject_Call + 107
20 org.python.python 0x000000010602437a slot_tp_call + 394
21 wrapper.cpython-311-darwin.so 0x0000000125848939 __pyx_pw_17OpenGL_accelerate_7wrapper_7Wrapper_3__call__ + 729
22 latebind.cpython-311-darwin.so 0x00000001258aa167 __pyx_pw_17OpenGL_accelerate_8latebind_8LateBind_11__call__ + 199
23 org.python.python 0x0000000105f973b1 _PyObject_MakeTpCall + 129
24 org.python.python 0x00000001060c53e7 _PyEval_EvalFrameDefault + 60455
25 org.python.python 0x00000001060cb4d0 _PyEval_Vector + 128
26 latebind.cpython-311-darwin.so 0x00000001258ab81b __pyx_pw_17OpenGL_accelerate_8latebind_5Curry_3__call__ + 203
27 org.python.python 0x0000000105f973b1 _PyObject_MakeTpCall + 129
28 org.python.python 0x00000001060c53e7 _PyEval_EvalFrameDefault + 60455
29 org.python.python 0x00000001060cb4d0 _PyEval_Vector + 128
30 org.python.python 0x0000000105f9b816 method_vectorcall + 454
31 QtCore.abi3.so 0x0000000110ffef98 PyQtSlot::call(_object*, _object*) const + 40
32 QtCore.abi3.so 0x0000000110ffee9a PyQtSlot::invoke(void**, _object*, void*, bool) const + 362
33 QtCore.abi3.so 0x0000000110fffde5 PyQtSlotProxy::unislot(void**) + 85
34 QtCore.abi3.so 0x0000000110fffd5a PyQtSlotProxy::qt_metacall(QMetaObject::Call, int, void**) + 58
35 QtCore 0x0000000111315d67 0x111258000 + 777575
36 QtCore 0x000000011132ab57 QTimer::timerEvent(QTimerEvent*) + 199
37 QtCore.abi3.so 0x0000000110eefb69 sipQTimer::timerEvent(QTimerEvent*) + 121
38 QtCore 0x000000011130e4cd QObject::event(QEvent*) + 109
39 QtCore.abi3.so 0x0000000110eef9ea sipQTimer::event(QEvent*) + 186
40 QtWidgets 0x0000000113caca87 QApplicationPrivate::notify_helper(QObject*, QEvent*) + 247
41 QtWidgets 0x0000000113cada43 QApplication::notify(QObject*, QEvent*) + 499
42 QtWidgets.abi3.so 0x00000001137c91e6 sipQApplication::notify(QObject*, QEvent*) + 230
43 QtCore 0x00000001112c5c3a QCoreApplication::notifyInternal2(QObject*, QEvent*) + 170
44 QtCore 0x000000011144f521 QTimerInfoList::activateTimers() + 961
45 libqcocoa.dylib 0x0000000120ccc4a5 0x120cb4000 + 99493
46 com.apple.CoreFoundation 0x00007fff349ccb64 __CFRUNLOOP_IS_CALLING_OUT_TO_A_SOURCE0_PERFORM_FUNCTION__ + 17
47 com.apple.CoreFoundation 0x00007fff349ccb03 __CFRunLoopDoSource0 + 103
48 com.apple.CoreFoundation 0x00007fff349cc91d __CFRunLoopDoSources0 + 209
49 com.apple.CoreFoundation 0x00007fff349cb639 __CFRunLoopRun + 937
50 com.apple.CoreFoundation 0x00007fff349cac33 CFRunLoopRunSpecific + 466
51 com.apple.HIToolbox 0x00007fff335e6aad RunCurrentEventLoopInMode + 292
52 com.apple.HIToolbox 0x00007fff335e67c5 ReceiveNextEventCommon + 584
53 com.apple.HIToolbox 0x00007fff335e6569 _BlockUntilNextEventMatchingListInModeWithFilter + 64
54 com.apple.AppKit 0x00007fff31c2f3c9 _DPSNextEvent + 883
55 com.apple.AppKit 0x00007fff31c2dc10 -[NSApplication(NSEvent) _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 1352
56 com.apple.AppKit 0x00007fff31c1f91e -[NSApplication run] + 658
57 libqcocoa.dylib 0x0000000120ccd0ac 0x120cb4000 + 102572
58 QtCore 0x00000001112cf326 QEventLoop::exec(QFlags) + 486
59 QtCore 0x00000001112c6235 QCoreApplication::exec() + 133
60 QtWidgets.abi3.so 0x00000001138b5d9a meth_QApplication_exec(_object*, _object*) + 90
61 org.python.python 0x0000000105ffc7ea cfunction_call + 90
62 org.python.python 0x0000000105f973b1 _PyObject_MakeTpCall + 129
63 org.python.python 0x00000001060c53e7 _PyEval_EvalFrameDefault + 60455
64 org.python.python 0x00000001060b547a PyEval_EvalCode + 282
65 org.python.python 0x00000001060afce3 builtin_exec + 483
66 org.python.python 0x0000000105ffd144 cfunction_vectorcall_FASTCALL_KEYWORDS + 68
67 org.python.python 0x00000001060c52ef _PyEval_EvalFrameDefault + 60207
68 org.python.python 0x00000001060cb4d0 _PyEval_Vector + 128
69 org.python.python 0x00000001061626fd pymain_run_module + 253
70 org.python.python 0x00000001061621c1 Py_RunMain + 2225
71 org.python.python 0x000000010616317b pymain_main + 43
72 org.python.python 0x000000010616314a Py_Main + 42
73 edu.ucsf.cgl.ChimeraX 0x0000000105eddd9a main + 122
74 libdyld.dylib 0x00007fff6e56dcc9 start + 1
Thread 1:: ThreadPoolServiceThread
0 libsystem_kernel.dylib 0x00007fff6e6b7b86 kevent64 + 10
1 QtWebEngineCore 0x00000001190a8a2a 0x115148000 + 66456106
2 QtWebEngineCore 0x00000001190a8927 0x115148000 + 66455847
3 QtWebEngineCore 0x0000000119025a5c 0x115148000 + 65919580
4 QtWebEngineCore 0x0000000118fdd998 0x115148000 + 65624472
5 QtWebEngineCore 0x0000000119047eb8 0x115148000 + 66059960
6 QtWebEngineCore 0x000000011902f2ad 0x115148000 + 65958573
7 QtWebEngineCore 0x000000011904804a 0x115148000 + 66060362
8 QtWebEngineCore 0x000000011906f908 0x115148000 + 66222344
9 libsystem_pthread.dylib 0x00007fff6e776109 _pthread_start + 148
10 libsystem_pthread.dylib 0x00007fff6e771b8b thread_start + 15
Thread 2:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff6e6aedea mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6e6af160 mach_msg + 60
2 QtWebEngineCore 0x0000000119076e26 0x115148000 + 66252326
3 QtWebEngineCore 0x000000011903b7bf 0x115148000 + 66009023
4 QtWebEngineCore 0x000000011903c26c 0x115148000 + 66011756
5 QtWebEngineCore 0x000000011903be6d 0x115148000 + 66010733
6 QtWebEngineCore 0x000000011906f908 0x115148000 + 66222344
7 libsystem_pthread.dylib 0x00007fff6e776109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff6e771b8b thread_start + 15
Thread 3:: Chrome_IOThread
0 libsystem_kernel.dylib 0x00007fff6e6b7b86 kevent64 + 10
1 QtWebEngineCore 0x00000001190a8a2a 0x115148000 + 66456106
2 QtWebEngineCore 0x00000001190a8927 0x115148000 + 66455847
3 QtWebEngineCore 0x0000000119025a5c 0x115148000 + 65919580
4 QtWebEngineCore 0x0000000118fdd998 0x115148000 + 65624472
5 QtWebEngineCore 0x0000000119047eb8 0x115148000 + 66059960
6 QtWebEngineCore 0x0000000117f6d3a2 0x115148000 + 48386978
7 QtWebEngineCore 0x000000011904804a 0x115148000 + 66060362
8 QtWebEngineCore 0x000000011906f908 0x115148000 + 66222344
9 libsystem_pthread.dylib 0x00007fff6e776109 _pthread_start + 148
10 libsystem_pthread.dylib 0x00007fff6e771b8b thread_start + 15
Thread 4:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff6e6aedea mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6e6af160 mach_msg + 60
2 QtWebEngineCore 0x0000000119076e26 0x115148000 + 66252326
3 QtWebEngineCore 0x0000000119076bef 0x115148000 + 66251759
4 QtWebEngineCore 0x0000000118fac1c9 0x115148000 + 65421769
5 QtWebEngineCore 0x0000000119025a5c 0x115148000 + 65919580
6 QtWebEngineCore 0x0000000118fdd998 0x115148000 + 65624472
7 QtWebEngineCore 0x0000000119047eb8 0x115148000 + 66059960
8 QtWebEngineCore 0x000000011904804a 0x115148000 + 66060362
9 QtWebEngineCore 0x000000011906f908 0x115148000 + 66222344
10 libsystem_pthread.dylib 0x00007fff6e776109 _pthread_start + 148
11 libsystem_pthread.dylib 0x00007fff6e771b8b thread_start + 15
Thread 5:: CompositorTileWorker1
0 libsystem_kernel.dylib 0x00007fff6e6b1872 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff6e776425 _pthread_cond_wait + 698
2 QtWebEngineCore 0x000000011906ed1b 0x115148000 + 66219291
3 QtWebEngineCore 0x000000011b13c92d 0x115148000 + 100616493
4 QtWebEngineCore 0x000000011906f908 0x115148000 + 66222344
5 libsystem_pthread.dylib 0x00007fff6e776109 _pthread_start + 148
6 libsystem_pthread.dylib 0x00007fff6e771b8b thread_start + 15
Thread 6:: Chrome_InProcGpuThread
0 libsystem_kernel.dylib 0x00007fff6e6aedea mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6e6af160 mach_msg + 60
2 QtWebEngineCore 0x0000000119076e26 0x115148000 + 66252326
3 QtWebEngineCore 0x0000000119076bef 0x115148000 + 66251759
4 QtWebEngineCore 0x0000000118fac1c9 0x115148000 + 65421769
5 QtWebEngineCore 0x0000000119025a5c 0x115148000 + 65919580
6 QtWebEngineCore 0x0000000118fdd998 0x115148000 + 65624472
7 QtWebEngineCore 0x0000000119047eb8 0x115148000 + 66059960
8 QtWebEngineCore 0x000000011904804a 0x115148000 + 66060362
9 QtWebEngineCore 0x000000011906f908 0x115148000 + 66222344
10 libsystem_pthread.dylib 0x00007fff6e776109 _pthread_start + 148
11 libsystem_pthread.dylib 0x00007fff6e771b8b thread_start + 15
Thread 7:: Chrome_ChildIOThread
0 libsystem_kernel.dylib 0x00007fff6e6b7b86 kevent64 + 10
1 QtWebEngineCore 0x00000001190a8a2a 0x115148000 + 66456106
2 QtWebEngineCore 0x00000001190a8927 0x115148000 + 66455847
3 QtWebEngineCore 0x0000000119025a5c 0x115148000 + 65919580
4 QtWebEngineCore 0x0000000118fdd998 0x115148000 + 65624472
5 QtWebEngineCore 0x0000000119047eb8 0x115148000 + 66059960
6 QtWebEngineCore 0x000000011904804a 0x115148000 + 66060362
7 QtWebEngineCore 0x000000011906f908 0x115148000 + 66222344
8 libsystem_pthread.dylib 0x00007fff6e776109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff6e771b8b thread_start + 15
Thread 8:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff6e6aedea mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6e6af160 mach_msg + 60
2 QtWebEngineCore 0x0000000119076e26 0x115148000 + 66252326
3 QtWebEngineCore 0x0000000119076bef 0x115148000 + 66251759
4 QtWebEngineCore 0x0000000118fac1c9 0x115148000 + 65421769
5 QtWebEngineCore 0x0000000119025a5c 0x115148000 + 65919580
6 QtWebEngineCore 0x0000000118fdd998 0x115148000 + 65624472
7 QtWebEngineCore 0x0000000119047eb8 0x115148000 + 66059960
8 QtWebEngineCore 0x000000011904804a 0x115148000 + 66060362
9 QtWebEngineCore 0x000000011906f908 0x115148000 + 66222344
10 libsystem_pthread.dylib 0x00007fff6e776109 _pthread_start + 148
11 libsystem_pthread.dylib 0x00007fff6e771b8b thread_start + 15
Thread 9:: VizCompositorThread
0 libsystem_kernel.dylib 0x00007fff6e6aedea mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6e6af160 mach_msg + 60
2 QtWebEngineCore 0x0000000119076e26 0x115148000 + 66252326
3 QtWebEngineCore 0x0000000119076bef 0x115148000 + 66251759
4 QtWebEngineCore 0x0000000118fac1c9 0x115148000 + 65421769
5 QtWebEngineCore 0x0000000119025a5c 0x115148000 + 65919580
6 QtWebEngineCore 0x0000000118fdd998 0x115148000 + 65624472
7 QtWebEngineCore 0x0000000119047eb8 0x115148000 + 66059960
8 QtWebEngineCore 0x000000011904804a 0x115148000 + 66060362
9 QtWebEngineCore 0x000000011906f908 0x115148000 + 66222344
10 libsystem_pthread.dylib 0x00007fff6e776109 _pthread_start + 148
11 libsystem_pthread.dylib 0x00007fff6e771b8b thread_start + 15
Thread 10:: NetworkService
0 libsystem_kernel.dylib 0x00007fff6e6b7b86 kevent64 + 10
1 QtWebEngineCore 0x00000001190a8a2a 0x115148000 + 66456106
2 QtWebEngineCore 0x00000001190a8927 0x115148000 + 66455847
3 QtWebEngineCore 0x0000000119025a5c 0x115148000 + 65919580
4 QtWebEngineCore 0x0000000118fdd998 0x115148000 + 65624472
5 QtWebEngineCore 0x0000000119047eb8 0x115148000 + 66059960
6 QtWebEngineCore 0x000000011904804a 0x115148000 + 66060362
7 QtWebEngineCore 0x000000011906f908 0x115148000 + 66222344
8 libsystem_pthread.dylib 0x00007fff6e776109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff6e771b8b thread_start + 15
Thread 11:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff6e6aedea mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6e6af160 mach_msg + 60
2 QtWebEngineCore 0x0000000119076e26 0x115148000 + 66252326
3 QtWebEngineCore 0x0000000119076bef 0x115148000 + 66251759
4 QtWebEngineCore 0x0000000118fac1c9 0x115148000 + 65421769
5 QtWebEngineCore 0x0000000119025a5c 0x115148000 + 65919580
6 QtWebEngineCore 0x0000000118fdd998 0x115148000 + 65624472
7 QtWebEngineCore 0x0000000119047eb8 0x115148000 + 66059960
8 QtWebEngineCore 0x000000011904804a 0x115148000 + 66060362
9 QtWebEngineCore 0x000000011906f908 0x115148000 + 66222344
10 libsystem_pthread.dylib 0x00007fff6e776109 _pthread_start + 148
11 libsystem_pthread.dylib 0x00007fff6e771b8b thread_start + 15
Thread 12:: ThreadPoolSingleThreadForegroundBlocking0
0 libsystem_kernel.dylib 0x00007fff6e6aedea mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6e6af160 mach_msg + 60
2 QtWebEngineCore 0x0000000119076e26 0x115148000 + 66252326
3 QtWebEngineCore 0x000000011903b7bf 0x115148000 + 66009023
4 QtWebEngineCore 0x000000011903c26c 0x115148000 + 66011756
5 QtWebEngineCore 0x000000011903becd 0x115148000 + 66010829
6 QtWebEngineCore 0x000000011906f908 0x115148000 + 66222344
7 libsystem_pthread.dylib 0x00007fff6e776109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff6e771b8b thread_start + 15
Thread 13:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff6e6aedea mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6e6af160 mach_msg + 60
2 QtWebEngineCore 0x0000000119076e26 0x115148000 + 66252326
3 QtWebEngineCore 0x0000000119076bef 0x115148000 + 66251759
4 QtWebEngineCore 0x0000000118fac1c9 0x115148000 + 65421769
5 QtWebEngineCore 0x0000000119025a5c 0x115148000 + 65919580
6 QtWebEngineCore 0x0000000118fdd998 0x115148000 + 65624472
7 QtWebEngineCore 0x0000000119047eb8 0x115148000 + 66059960
8 QtWebEngineCore 0x000000011904804a 0x115148000 + 66060362
9 QtWebEngineCore 0x000000011906f908 0x115148000 + 66222344
10 libsystem_pthread.dylib 0x00007fff6e776109 _pthread_start + 148
11 libsystem_pthread.dylib 0x00007fff6e771b8b thread_start + 15
Thread 14:
0 libsystem_kernel.dylib 0x00007fff6e6b1872 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff6e776425 _pthread_cond_wait + 698
2 interpreter.cpython-311-darwin.so 0x0000000133895d63 th_worker(void*) + 131
3 libsystem_pthread.dylib 0x00007fff6e776109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff6e771b8b thread_start + 15
Thread 15:
0 libsystem_kernel.dylib 0x00007fff6e6b1872 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff6e776425 _pthread_cond_wait + 698
2 interpreter.cpython-311-darwin.so 0x0000000133895d63 th_worker(void*) + 131
3 libsystem_pthread.dylib 0x00007fff6e776109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff6e771b8b thread_start + 15
Thread 16:
0 libsystem_kernel.dylib 0x00007fff6e6b1872 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff6e776425 _pthread_cond_wait + 698
2 interpreter.cpython-311-darwin.so 0x0000000133895d63 th_worker(void*) + 131
3 libsystem_pthread.dylib 0x00007fff6e776109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff6e771b8b thread_start + 15
Thread 17:
0 libsystem_kernel.dylib 0x00007fff6e6b1872 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff6e776425 _pthread_cond_wait + 698
2 interpreter.cpython-311-darwin.so 0x0000000133895d63 th_worker(void*) + 131
3 libsystem_pthread.dylib 0x00007fff6e776109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff6e771b8b thread_start + 15
Thread 18:
0 libsystem_kernel.dylib 0x00007fff6e6b1872 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff6e776425 _pthread_cond_wait + 698
2 libopenblas64_.0.dylib 0x000000010785067f blas_thread_server + 207
3 libsystem_pthread.dylib 0x00007fff6e776109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff6e771b8b thread_start + 15
Thread 19:: com.apple.NSEventThread
0 libsystem_kernel.dylib 0x00007fff6e6aedea mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6e6af160 mach_msg + 60
2 com.apple.CoreFoundation 0x00007fff349ccd07 __CFRunLoopServiceMachPort + 247
3 com.apple.CoreFoundation 0x00007fff349cb7c1 __CFRunLoopRun + 1329
4 com.apple.CoreFoundation 0x00007fff349cac33 CFRunLoopRunSpecific + 466
5 com.apple.AppKit 0x00007fff31dd0bf4 _NSEventThread + 132
6 libsystem_pthread.dylib 0x00007fff6e776109 _pthread_start + 148
7 libsystem_pthread.dylib 0x00007fff6e771b8b thread_start + 15
Thread 20:: MemoryInfra
0 libsystem_kernel.dylib 0x00007fff6e6aedea mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6e6af160 mach_msg + 60
2 QtWebEngineCore 0x0000000119076e26 0x115148000 + 66252326
3 QtWebEngineCore 0x0000000119076bef 0x115148000 + 66251759
4 QtWebEngineCore 0x0000000118fac1c9 0x115148000 + 65421769
5 QtWebEngineCore 0x0000000119025a5c 0x115148000 + 65919580
6 QtWebEngineCore 0x0000000118fdd998 0x115148000 + 65624472
7 QtWebEngineCore 0x0000000119047eb8 0x115148000 + 66059960
8 QtWebEngineCore 0x000000011904804a 0x115148000 + 66060362
9 QtWebEngineCore 0x000000011906f908 0x115148000 + 66222344
10 libsystem_pthread.dylib 0x00007fff6e776109 _pthread_start + 148
11 libsystem_pthread.dylib 0x00007fff6e771b8b thread_start + 15
Thread 21:: ThreadPoolSingleThreadSharedBackgroundBlocking1
0 libsystem_kernel.dylib 0x00007fff6e6aedea mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6e6af160 mach_msg + 60
2 QtWebEngineCore 0x0000000119076e26 0x115148000 + 66252326
3 QtWebEngineCore 0x000000011903b7bf 0x115148000 + 66009023
4 QtWebEngineCore 0x000000011903bf9a 0x115148000 + 66011034
5 QtWebEngineCore 0x000000011903be0d 0x115148000 + 66010637
6 QtWebEngineCore 0x000000011906f908 0x115148000 + 66222344
7 libsystem_pthread.dylib 0x00007fff6e776109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff6e771b8b thread_start + 15
Thread 22:: ThreadPoolBackgroundWorker
0 libsystem_kernel.dylib 0x00007fff6e6aedea mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6e6af160 mach_msg + 60
2 QtWebEngineCore 0x0000000119076e26 0x115148000 + 66252326
3 QtWebEngineCore 0x000000011903b7bf 0x115148000 + 66009023
4 QtWebEngineCore 0x000000011903c26c 0x115148000 + 66011756
5 QtWebEngineCore 0x000000011903bddd 0x115148000 + 66010589
6 QtWebEngineCore 0x000000011906f908 0x115148000 + 66222344
7 libsystem_pthread.dylib 0x00007fff6e776109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff6e771b8b thread_start + 15
Thread 23:
0 libsystem_pthread.dylib 0x00007fff6e771b68 start_wqthread + 0
Thread 24:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff6e6aedea mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6e6af160 mach_msg + 60
2 QtWebEngineCore 0x0000000119076e26 0x115148000 + 66252326
3 QtWebEngineCore 0x000000011903b7bf 0x115148000 + 66009023
4 QtWebEngineCore 0x000000011903c26c 0x115148000 + 66011756
5 QtWebEngineCore 0x000000011903be6d 0x115148000 + 66010733
6 QtWebEngineCore 0x000000011906f908 0x115148000 + 66222344
7 libsystem_pthread.dylib 0x00007fff6e776109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff6e771b8b thread_start + 15
Thread 25:
0 libsystem_pthread.dylib 0x00007fff6e771b68 start_wqthread + 0
Thread 26:
0 libsystem_pthread.dylib 0x00007fff6e771b68 start_wqthread + 0
Thread 27:: ThreadPoolBackgroundWorker
0 libsystem_kernel.dylib 0x00007fff6e6aedea mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6e6af160 mach_msg + 60
2 QtWebEngineCore 0x0000000119076e26 0x115148000 + 66252326
3 QtWebEngineCore 0x000000011903b7bf 0x115148000 + 66009023
4 QtWebEngineCore 0x000000011903bf9a 0x115148000 + 66011034
5 QtWebEngineCore 0x000000011903bddd 0x115148000 + 66010589
6 QtWebEngineCore 0x000000011906f908 0x115148000 + 66222344
7 libsystem_pthread.dylib 0x00007fff6e776109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff6e771b8b thread_start + 15
Thread 28:
0 libsystem_pthread.dylib 0x00007fff6e771b68 start_wqthread + 0
Thread 29:
0 libsystem_kernel.dylib 0x00007fff6e6b1872 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff6e776425 _pthread_cond_wait + 698
2 org.python.python 0x000000010614f214 PyThread_acquire_lock_timed + 340
3 org.python.python 0x00000001061d2d9e acquire_timed + 318
4 org.python.python 0x00000001061d2fdc lock_PyThread_acquire_lock + 44
5 org.python.python 0x0000000105fa8b07 method_vectorcall_VARARGS_KEYWORDS + 167
6 org.python.python 0x00000001060c52ef _PyEval_EvalFrameDefault + 60207
7 org.python.python 0x00000001060cb4d0 _PyEval_Vector + 128
8 org.python.python 0x0000000105f9b816 method_vectorcall + 454
9 org.python.python 0x00000001061d3b26 thread_run + 230
10 org.python.python 0x000000010614eea4 pythread_wrapper + 36
11 libsystem_pthread.dylib 0x00007fff6e776109 _pthread_start + 148
12 libsystem_pthread.dylib 0x00007fff6e771b8b thread_start + 15
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x000000010ec91dc0 rcx: 0x00007f9f5afdd9e8 rdx: 0x0000000000000000
rdi: 0x0000000000000307 rsi: 0x0000000000000006 rbp: 0x00007f9f5afdda10 rsp: 0x00007f9f5afdd9e8
r8: 0x0000000000000002 r9: 0xcccccccccccccccd r10: 0x000000010ec91dc0 r11: 0x0000000000000246
r12: 0x0000000000000307 r13: 0x00007f9f5c9bf201 r14: 0x0000000000000006 r15: 0x0000000000000016
rip: 0x00007fff6e6b532a rfl: 0x0000000000000246 cr2: 0x0000000106132630
Logical CPU: 0
Error Code: 0x02000148
Trap Number: 133
Binary Images:
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0x106c4e000 - 0x106c51fff +_posixsubprocess.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/lib-dynload/_posixsubprocess.cpython-311-darwin.so
0x106c5e000 - 0x106c65ffb +select.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/lib-dynload/select.cpython-311-darwin.so
0x106d72000 - 0x106d75fff +_arrays.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/arrays/_arrays.cpython-311-darwin.so
0x106d82000 - 0x106e95fff +libarrays.dylib (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/arrays/lib/libarrays.dylib
0x106ec2000 - 0x106ec9ffb +_json.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/lib-dynload/_json.cpython-311-darwin.so
0x106ed6000 - 0x107389fe3 +_multiarray_umath.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/numpy/core/_multiarray_umath.cpython-311-darwin.so
0x107502000 - 0x10b220667 +libopenblas64_.0.dylib (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/numpy/.dylibs/libopenblas64_.0.dylib
0x10b4e2000 - 0x10bb24fef +libgfortran.5.dylib (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/numpy/.dylibs/libgfortran.5.dylib
0x10bb5f000 - 0x10bbacfff +libquadmath.0.dylib (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/numpy/.dylibs/libquadmath.0.dylib
0x10bbb6000 - 0x10bbc6ff7 +libgcc_s.1.1.dylib (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/numpy/.dylibs/libgcc_s.1.1.dylib
0x10ddd8000 - 0x10ddf3ffb +_pickle.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/lib-dynload/_pickle.cpython-311-darwin.so
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0x10de18000 - 0x10de2bfff +_multiarray_tests.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/numpy/core/_multiarray_tests.cpython-311-darwin.so
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0x10df70000 - 0x10df8fff3 +_umath_linalg.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/numpy/linalg/_umath_linalg.cpython-311-darwin.so
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0x10e5f0000 - 0x10e5ffff3 +_pcg64.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/numpy/random/_pcg64.cpython-311-darwin.so
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0x10e62c000 - 0x10e6bbffb +_generator.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/numpy/random/_generator.cpython-311-darwin.so
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0x10ebc6000 - 0x10ec58267 dyld (750.7) /usr/lib/dyld
0x110ecc000 - 0x11104fffb +QtCore.abi3.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/PyQt6/QtCore.abi3.so
0x111258000 - 0x11175b927 +QtCore (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/PyQt6/Qt6/lib/QtCore.framework/Versions/A/QtCore
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0x113690000 - 0x11393bff3 +QtWidgets.abi3.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/PyQt6/QtWidgets.abi3.so
0x113ca0000 - 0x11415bfff +QtWidgets (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/PyQt6/Qt6/lib/QtWidgets.framework/Versions/A/QtWidgets
0x1142b8000 - 0x11495ffe7 +QtGui (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/PyQt6/Qt6/lib/QtGui.framework/Versions/A/QtGui
0x114a8c000 - 0x114b17ff3 +QtDBus (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/PyQt6/Qt6/lib/QtDBus.framework/Versions/A/QtDBus
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0x7fff6d48c000 - 0x7fff6d48fff3 libpmenergy.dylib (214.120.2) /usr/lib/libpmenergy.dylib
0x7fff6d490000 - 0x7fff6d492fff libpmsample.dylib (214.120.2) /usr/lib/libpmsample.dylib
0x7fff6d4c1000 - 0x7fff6d4d9fff libresolv.9.dylib (67.40.3) /usr/lib/libresolv.9.dylib
0x7fff6d4db000 - 0x7fff6d51fff7 libsandbox.1.dylib (1217.141.9) /usr/lib/libsandbox.1.dylib
0x7fff6d520000 - 0x7fff6d532ff7 libsasl2.2.dylib (213.120.1) /usr/lib/libsasl2.2.dylib
0x7fff6d533000 - 0x7fff6d534ff7 libspindump.dylib (281.4) /usr/lib/libspindump.dylib
0x7fff6d535000 - 0x7fff6d717ff7 libsqlite3.dylib (308.6) /usr/lib/libsqlite3.dylib
0x7fff6d80b000 - 0x7fff6d838ffb libssl.46.dylib (47.140.3) /usr/lib/libssl.46.dylib
0x7fff6d8ba000 - 0x7fff6d8ebff7 libtidy.A.dylib (17.3) /usr/lib/libtidy.A.dylib
0x7fff6d90d000 - 0x7fff6d967ff8 libusrtcp.dylib (1880.120.5) /usr/lib/libusrtcp.dylib
0x7fff6d968000 - 0x7fff6d96bffb libutil.dylib (57.140.1) /usr/lib/libutil.dylib
0x7fff6d96c000 - 0x7fff6d979fff libxar.1.dylib (425.7) /usr/lib/libxar.1.dylib
0x7fff6d97f000 - 0x7fff6da61ff7 libxml2.2.dylib (33.14) /usr/lib/libxml2.2.dylib
0x7fff6da65000 - 0x7fff6da8dfff libxslt.1.dylib (16.12) /usr/lib/libxslt.1.dylib
0x7fff6da8e000 - 0x7fff6daa0ff3 libz.1.dylib (76.0.1) /usr/lib/libz.1.dylib
0x7fff6e34f000 - 0x7fff6e354ff3 libcache.dylib (83) /usr/lib/system/libcache.dylib
0x7fff6e355000 - 0x7fff6e360fff libcommonCrypto.dylib (60165.120.1) /usr/lib/system/libcommonCrypto.dylib
0x7fff6e361000 - 0x7fff6e368fff libcompiler_rt.dylib (101.2) /usr/lib/system/libcompiler_rt.dylib
0x7fff6e369000 - 0x7fff6e372ff7 libcopyfile.dylib (166.40.1) /usr/lib/system/libcopyfile.dylib
0x7fff6e373000 - 0x7fff6e405fdb libcorecrypto.dylib (866.140.2) /usr/lib/system/libcorecrypto.dylib
0x7fff6e512000 - 0x7fff6e552ff0 libdispatch.dylib (1173.100.2) /usr/lib/system/libdispatch.dylib
0x7fff6e553000 - 0x7fff6e589fff libdyld.dylib (750.7) /usr/lib/system/libdyld.dylib
0x7fff6e58a000 - 0x7fff6e58affb libkeymgr.dylib (30) /usr/lib/system/libkeymgr.dylib
0x7fff6e58b000 - 0x7fff6e597ff3 libkxld.dylib (6153.141.66) /usr/lib/system/libkxld.dylib
0x7fff6e598000 - 0x7fff6e598ff7 liblaunch.dylib (1738.140.3) /usr/lib/system/liblaunch.dylib
0x7fff6e599000 - 0x7fff6e59eff7 libmacho.dylib (959.0.1) /usr/lib/system/libmacho.dylib
0x7fff6e59f000 - 0x7fff6e5a1ff3 libquarantine.dylib (110.40.6) /usr/lib/system/libquarantine.dylib
0x7fff6e5a2000 - 0x7fff6e5a3ff7 libremovefile.dylib (48) /usr/lib/system/libremovefile.dylib
0x7fff6e5a4000 - 0x7fff6e5bbff3 libsystem_asl.dylib (377.60.4) /usr/lib/system/libsystem_asl.dylib
0x7fff6e5bc000 - 0x7fff6e5bcff7 libsystem_blocks.dylib (74) /usr/lib/system/libsystem_blocks.dylib
0x7fff6e5bd000 - 0x7fff6e644fff libsystem_c.dylib (1353.100.4) /usr/lib/system/libsystem_c.dylib
0x7fff6e645000 - 0x7fff6e648ffb libsystem_configuration.dylib (1061.141.2) /usr/lib/system/libsystem_configuration.dylib
0x7fff6e649000 - 0x7fff6e64cfff libsystem_coreservices.dylib (114.1) /usr/lib/system/libsystem_coreservices.dylib
0x7fff6e64d000 - 0x7fff6e655fff libsystem_darwin.dylib (1353.100.4) /usr/lib/system/libsystem_darwin.dylib
0x7fff6e656000 - 0x7fff6e65dfff libsystem_dnssd.dylib (1096.100.3) /usr/lib/system/libsystem_dnssd.dylib
0x7fff6e65e000 - 0x7fff6e65fffb libsystem_featureflags.dylib (17) /usr/lib/system/libsystem_featureflags.dylib
0x7fff6e660000 - 0x7fff6e6adff7 libsystem_info.dylib (538.1) /usr/lib/system/libsystem_info.dylib
0x7fff6e6ae000 - 0x7fff6e6daff7 libsystem_kernel.dylib (6153.141.66) /usr/lib/system/libsystem_kernel.dylib
0x7fff6e6db000 - 0x7fff6e726fef libsystem_m.dylib (3178) /usr/lib/system/libsystem_m.dylib
0x7fff6e727000 - 0x7fff6e74efff libsystem_malloc.dylib (283.100.6) /usr/lib/system/libsystem_malloc.dylib
0x7fff6e74f000 - 0x7fff6e75cffb libsystem_networkextension.dylib (1095.140.2) /usr/lib/system/libsystem_networkextension.dylib
0x7fff6e75d000 - 0x7fff6e766ff7 libsystem_notify.dylib (241.100.2) /usr/lib/system/libsystem_notify.dylib
0x7fff6e767000 - 0x7fff6e76ffef libsystem_platform.dylib (220.100.1) /usr/lib/system/libsystem_platform.dylib
0x7fff6e770000 - 0x7fff6e77afff libsystem_pthread.dylib (416.100.3) /usr/lib/system/libsystem_pthread.dylib
0x7fff6e77b000 - 0x7fff6e77fff3 libsystem_sandbox.dylib (1217.141.9) /usr/lib/system/libsystem_sandbox.dylib
0x7fff6e780000 - 0x7fff6e782fff libsystem_secinit.dylib (62.100.2) /usr/lib/system/libsystem_secinit.dylib
0x7fff6e783000 - 0x7fff6e78affb libsystem_symptoms.dylib (1238.120.2) /usr/lib/system/libsystem_symptoms.dylib
0x7fff6e78b000 - 0x7fff6e7a1ff2 libsystem_trace.dylib (1147.120.1) /usr/lib/system/libsystem_trace.dylib
0x7fff6e7a3000 - 0x7fff6e7a8ff7 libunwind.dylib (35.4) /usr/lib/system/libunwind.dylib
0x7fff6e7a9000 - 0x7fff6e7deffe libxpc.dylib (1738.140.3) /usr/lib/system/libxpc.dylib
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 16
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 57048520
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=1.0G resident=0K(0%) swapped_out_or_unallocated=1.0G(100%)
Writable regions: Total=1.4G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=1.4G(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 512K 4
Activity Tracing 256K 1
CG backing stores 1216K 4
CG image 132K 16
CoreAnimation 144K 17
CoreGraphics 8K 1
CoreImage 32K 4
CoreUI image data 2688K 28
Foundation 4K 1
Kernel Alloc Once 8K 1
MALLOC 617.7M 571
MALLOC guard page 32K 7
MALLOC_LARGE (reserved) 256K 1 reserved VM address space (unallocated)
MALLOC_NANO (reserved) 384.0M 1 reserved VM address space (unallocated)
Mach message 16K 2
OpenGL GLSL 384K 4
STACK GUARD 116K 29
Stack 173.2M 30
Stack Guard 56.0M 1
VM_ALLOCATE 302.0M 921
__DATA 64.9M 624
__DATA_CONST 52K 5
__FONT_DATA 4K 1
__GLSLBUILTINS 5176K 1
__LINKEDIT 420.9M 271
__OBJC_RO 32.3M 1
__OBJC_RW 1908K 2
__TEXT 617.0M 587
__UNICODE 564K 1
mapped file 90.5M 50
shared memory 2984K 27
=========== ======= =======
TOTAL 2.7G 3214
TOTAL, minus reserved VM space 2.3G 3214
===== Log before crash start =====
Startup Messages
---
warning | Replacing fetcher for 'pdb_nmr' and format NMRSTAR from NMRSTAR
bundle with that from NMRSTAR bundle
UCSF ChimeraX version: 1.7.1 (2024-01-23)
© 2016-2023 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open /Users/fridolinkoch/Desktop/05047_mito_oc.seg
Summary of feedback from opening /Users/fridolinkoch/Desktop/05047_mito_oc.seg
---
notes | Opened 05047_fSIRT_10_scores_binvol_4.mrc as #1, grid size
252,360,125, pixel 16,16,16, shown at level 2.68, step 1, values float32
Only showing 60 of 342 regions.
Showing 60 of 342 region surfaces
Opened 05047_mito_oc.seg
Showing 05047_mito_oc.seg - 342 regions, 60 surfaces
> hide #!1 models
> show #!1 models
> hide #!1 models
> show #!1 models
> hide #!1 models
> show #!1 models
> hide #!1 models
> show #!1 models
> hide #!1 models
> show #!1 models
> hide #!1 models
> show #!1 models
> hide #!1 models
> show #!1 models
> hide #!1 models
> show #!1 models
> hide #!1 models
> show #!1 models
> hide #!1 models
> show #!1 models
> hide #!1 models
> show #!1 models
> hide #!1 models
> show #!1 models
> hide #!1 models
> show #!1 models
> hide #!2 models
> hide #!1 models
> show #!1 models
> show #!2 models
> close session
> open /Users/fridolinkoch/Desktop/05047_mito_oc.seg format segger
Summary of feedback from opening /Users/fridolinkoch/Desktop/05047_mito_oc.seg
---
notes | Opened 05047_fSIRT_10_scores_binvol_4.mrc as #1, grid size
252,360,125, pixel 16,16,16, shown at level 2.68, step 1, values float32
Only showing 60 of 342 regions.
Showing 60 of 342 region surfaces
Opened 05047_mito_oc.seg
Showing 05047_mito_oc.seg - 342 regions, 60 surfaces
> volume #1 level 2.68
> volume #1 level -1.727
> hide #!2 models
> volume #1 level -1.959
Segmenting 05047_fSIRT_10_scores_binvol_4.mrc, density threshold -1.958864
Only showing 1500 of 3090 regions.
Showing 1500 of 3090 region surfaces
Showing 229 region surfaces
3090 watershed regions, grouped to 229 regions
Showing 05047_fSIRT_10_scores_binvol_4.seg - 229 regions, 229 surfaces
> select #2.1
1 model selected
> select #2.1
1 model selected
> select #2.1
1 model selected
> select subtract #2.1
Nothing selected
> select #2.1
1 model selected
===== Log before crash end =====
Log:
Startup Messages
---
warning | Replacing fetcher for 'pdb_nmr' and format NMRSTAR from NMRSTAR
bundle with that from NMRSTAR bundle
UCSF ChimeraX version: 1.7.1 (2024-01-23)
© 2016-2023 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 INTEL-14.7.28
OpenGL renderer: Intel HD Graphics 4000 OpenGL Engine
OpenGL vendor: Intel Inc.
Python: 3.11.2
Locale: UTF-8
Qt version: PyQt6 6.3.1, Qt 6.3.1
Qt runtime version: 6.3.2
Qt platform: cocoa
Hardware:
Hardware Overview:
Model Name: MacBook Pro
Model Identifier: MacBookPro10,2
Processor Name: Dual-Core Intel Core i7
Processor Speed: 3 GHz
Number of Processors: 1
Total Number of Cores: 2
L2 Cache (per Core): 256 KB
L3 Cache: 4 MB
Hyper-Threading Technology: Enabled
Memory: 8 GB
Boot ROM Version: 429.0.0.0.0
SMC Version (system): 2.6f59
Sudden Motion Sensor:
State: Enabled
Software:
System Software Overview:
System Version: macOS 10.15.7 (19H2026)
Kernel Version: Darwin 19.6.0
Time since boot: 58 days 23:28
Graphics/Displays:
Intel HD Graphics 4000:
Chipset Model: Intel HD Graphics 4000
Type: GPU
Bus: Built-In
VRAM (Dynamic, Max): 1536 MB
Vendor: Intel
Device ID: 0x0166
Revision ID: 0x0009
Metal: Supported, feature set macOS GPUFamily1 v4
Displays:
Color LCD:
Display Type: Built-In Retina LCD
Resolution: 2560 x 1600 Retina
Framebuffer Depth: 24-Bit Color (ARGB8888)
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: No
Connection Type: Internal
DELL U2412M:
Resolution: 1920 x 1200 (WUXGA - Widescreen Ultra eXtended Graphics Array)
UI Looks like: 1920 x 1200
Framebuffer Depth: 24-Bit Color (ARGB8888)
Display Serial Number: 0FFXD42S16ES
Mirror: Off
Online: Yes
Rotation: Supported
Automatically Adjust Brightness: No
Connection Type: Thunderbolt/DisplayPort
Installed Packages:
alabaster: 0.7.16
appdirs: 1.4.4
appnope: 0.1.3
asttokens: 2.4.1
Babel: 2.14.0
backcall: 0.2.0
beautifulsoup4: 4.11.2
blockdiag: 3.0.0
blosc2: 2.0.0
build: 0.10.0
certifi: 2022.12.7
cftime: 1.6.3
charset-normalizer: 3.3.2
ChimeraX-AddCharge: 1.5.13
ChimeraX-AddH: 2.2.5
ChimeraX-AlignmentAlgorithms: 2.0.1
ChimeraX-AlignmentHdrs: 3.4.1
ChimeraX-AlignmentMatrices: 2.1
ChimeraX-Alignments: 2.12.2
ChimeraX-AlphaFold: 1.0
ChimeraX-AltlocExplorer: 1.1.1
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.1
ChimeraX-Atomic: 1.49.1
ChimeraX-AtomicLibrary: 12.1.5
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.3.2
ChimeraX-BasicActions: 1.1.2
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.1.2
ChimeraX-BondRot: 2.0.4
ChimeraX-BugReporter: 1.0.1
ChimeraX-BuildStructure: 2.10.5
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.2.2
ChimeraX-ButtonPanel: 1.0.1
ChimeraX-CageBuilder: 1.0.1
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.3.2
ChimeraX-ChangeChains: 1.1
ChimeraX-CheckWaters: 1.3.2
ChimeraX-ChemGroup: 2.0.1
ChimeraX-Clashes: 2.2.4
ChimeraX-ColorActions: 1.0.3
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.5
ChimeraX-CommandLine: 1.2.5
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0.1
ChimeraX-Core: 1.7.1
ChimeraX-CoreFormats: 1.2
ChimeraX-coulombic: 1.4.2
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0.1
ChimeraX-DataFormats: 1.2.3
ChimeraX-Dicom: 1.2
ChimeraX-DistMonitor: 1.4
ChimeraX-DockPrep: 1.1.3
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ESMFold: 1.0
ChimeraX-FileHistory: 1.0.1
ChimeraX-FunctionKey: 1.0.1
ChimeraX-Geometry: 1.3
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1.1
ChimeraX-Hbonds: 2.4
ChimeraX-Help: 1.2.2
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ItemsInspection: 1.0.1
ChimeraX-IUPAC: 1.0
ChimeraX-Label: 1.1.8
ChimeraX-ListInfo: 1.2.2
ChimeraX-Log: 1.1.6
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.9.1
ChimeraX-Map: 1.1.4
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0.1
ChimeraX-MapFilter: 2.0.1
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1.1
ChimeraX-Markers: 1.0.1
ChimeraX-Mask: 1.0.2
ChimeraX-MatchMaker: 2.1.2
ChimeraX-MCopy: 1.0
ChimeraX-MDcrds: 2.6.1
ChimeraX-MedicalToolbar: 1.0.2
ChimeraX-Meeting: 1.0.1
ChimeraX-MLP: 1.1.1
ChimeraX-mmCIF: 2.12.1
ChimeraX-MMTF: 2.2
ChimeraX-Modeller: 1.5.14
ChimeraX-ModelPanel: 1.4
ChimeraX-ModelSeries: 1.0.1
ChimeraX-Mol2: 2.0.3
ChimeraX-Mole: 1.0
ChimeraX-Morph: 1.0.2
ChimeraX-MouseModes: 1.2
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nifti: 1.1
ChimeraX-NRRD: 1.1
ChimeraX-Nucleotides: 2.0.3
ChimeraX-OpenCommand: 1.13.1
ChimeraX-PDB: 2.7.3
ChimeraX-PDBBio: 1.0.1
ChimeraX-PDBLibrary: 1.0.4
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0.1
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1
ChimeraX-PubChem: 2.1
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1.2
ChimeraX-RemoteControl: 1.0
ChimeraX-RenderByAttr: 1.1
ChimeraX-RenumberResidues: 1.1
ChimeraX-ResidueFit: 1.0.1
ChimeraX-RestServer: 1.2
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 4.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5.1
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0.2
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0.1
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.11
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0.1
ChimeraX-Shortcuts: 1.1.1
ChimeraX-ShowSequences: 1.0.2
ChimeraX-SideView: 1.0.1
ChimeraX-Smiles: 2.1.2
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.12.4
ChimeraX-STL: 1.0.1
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.1.2
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0.1
ChimeraX-SwapAA: 2.0.1
ChimeraX-SwapRes: 2.2.2
ChimeraX-TapeMeasure: 1.0
ChimeraX-TaskManager: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.1.2
ChimeraX-ToolshedUtils: 1.2.4
ChimeraX-Topography: 1.0
ChimeraX-ToQuest: 1.0
ChimeraX-Tug: 1.0.1
ChimeraX-UI: 1.33.3
ChimeraX-uniprot: 2.3
ChimeraX-UnitCell: 1.0.1
ChimeraX-ViewDockX: 1.3.2
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0.1
ChimeraX-vrml: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0.2
ChimeraX-WebServices: 1.1.3
ChimeraX-Zone: 1.0.1
colorama: 0.4.6
comm: 0.2.1
contourpy: 1.2.0
cxservices: 1.2.2
cycler: 0.12.1
Cython: 0.29.33
debugpy: 1.8.0
decorator: 5.1.1
docutils: 0.19
executing: 2.0.1
filelock: 3.9.0
fonttools: 4.47.2
funcparserlib: 2.0.0a0
glfw: 2.6.4
grako: 3.16.5
h5py: 3.10.0
html2text: 2020.1.16
idna: 3.6
ihm: 0.38
imagecodecs: 2023.9.18
imagesize: 1.4.1
ipykernel: 6.23.2
ipython: 8.14.0
ipython-genutils: 0.2.0
ipywidgets: 8.1.1
jedi: 0.18.2
Jinja2: 3.1.2
jupyter-client: 8.2.0
jupyter-core: 5.7.1
jupyterlab-widgets: 3.0.9
kiwisolver: 1.4.5
line-profiler: 4.0.2
lxml: 4.9.2
lz4: 4.3.2
MarkupSafe: 2.1.4
matplotlib: 3.7.2
matplotlib-inline: 0.1.6
msgpack: 1.0.4
nest-asyncio: 1.6.0
netCDF4: 1.6.2
networkx: 3.1
nibabel: 5.0.1
nptyping: 2.5.0
numexpr: 2.8.8
numpy: 1.25.1
openvr: 1.23.701
packaging: 21.3
ParmEd: 3.4.3
parso: 0.8.3
pep517: 0.13.0
pexpect: 4.9.0
pickleshare: 0.7.5
pillow: 10.2.0
pip: 23.0
pkginfo: 1.9.6
platformdirs: 4.1.0
prompt-toolkit: 3.0.43
psutil: 5.9.5
ptyprocess: 0.7.0
pure-eval: 0.2.2
py-cpuinfo: 9.0.0
pycollada: 0.7.2
pydicom: 2.3.0
Pygments: 2.16.1
pynrrd: 1.0.0
PyOpenGL: 3.1.7
PyOpenGL-accelerate: 3.1.7
pyopenxr: 1.0.2801
pyparsing: 3.0.9
pyproject-hooks: 1.0.0
PyQt6-commercial: 6.3.1
PyQt6-Qt6: 6.3.2
PyQt6-sip: 13.4.0
PyQt6-WebEngine-commercial: 6.3.1
PyQt6-WebEngine-Qt6: 6.3.2
python-dateutil: 2.8.2
pytz: 2023.3.post1
pyzmq: 25.1.2
qtconsole: 5.4.3
QtPy: 2.4.1
RandomWords: 0.4.0
requests: 2.31.0
scipy: 1.11.1
setuptools: 67.4.0
setuptools-scm: 7.0.5
sfftk-rw: 0.7.3
six: 1.16.0
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
soupsieve: 2.5
sphinx: 6.1.3
sphinx-autodoc-typehints: 1.22
sphinxcontrib-applehelp: 1.0.8
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 1.0.6
sphinxcontrib-htmlhelp: 2.0.5
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.7
sphinxcontrib-serializinghtml: 1.1.10
stack-data: 0.6.3
superqt: 0.5.0
tables: 3.8.0
tcia-utils: 1.5.1
tifffile: 2023.7.18
tinyarray: 1.2.4
tomli: 2.0.1
tornado: 6.4
traitlets: 5.9.0
typing-extensions: 4.9.0
tzdata: 2023.4
urllib3: 2.1.0
wcwidth: 0.2.13
webcolors: 1.12
wheel: 0.38.4
wheel-filename: 1.4.1
widgetsnbextension: 4.0.9
Change History (2)
comment:1 by , 17 months ago
| Component: | Unassigned → Graphics |
|---|---|
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → assigned |
| Summary: | ChimeraX bug report submission → Graphics hardware encountered an error and was reset |
comment:2 by , 17 months ago
| Resolution: | → nonchimerax |
|---|---|
| Status: | assigned → closed |
| Summary: | Graphics hardware encountered an error and was reset → Graphics crash, macOS 10.15.7, Intel HD Graphics 4000 |
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Apple Intel graphics driver crash