![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 18 months ago
Closed 18 months ago
#15069 closed defect (duplicate)
Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device returned engine == 0
| Reported by: | Owned by: | pett | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Window Toolkit | Version: | |
| Keywords: | Cc: | Tom Goddard | |
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: macOS-10.16-x86_64-i386-64bit
ChimeraX Version: 1.6.1 (2023-05-09 17:57:07 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Fatal Python error: Segmentation fault
Current thread 0x00000002026eb280 (most recent call first):
File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/ui/gui.py", line 275 in event_loop
File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/__main__.py", line 892 in init
File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/__main__.py", line 1043 in
File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 87 in _run_code
File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 197 in _run_module_as_main
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{
"uptime" : 2100000,
"procRole" : "Background",
"version" : 2,
"userID" : 501,
"deployVersion" : 210,
"modelCode" : "MacBookPro18,3",
"coalitionID" : 272135,
"osVersion" : {
"train" : "macOS 13.4",
"build" : "22F66",
"releaseType" : "User"
},
"captureTime" : "2024-04-29 16:52:51.0201 -0700",
"incident" : "B68DE774-1FDE-4492-B6A2-14551468E65D",
"pid" : 5542,
"translated" : true,
"cpuType" : "X86-64",
"roots_installed" : 0,
"bug_type" : "309",
"procLaunch" : "2024-04-25 13:54:54.1321 -0700",
"procStartAbsTime" : 50086807904142,
"procExitAbsTime" : 52538945177386,
"procName" : "ChimeraX",
"procPath" : "\/Applications\/ChimeraX-1.6.1.app\/Contents\/MacOS\/ChimeraX",
"bundleInfo" : {"CFBundleShortVersionString":"1.6.1","CFBundleVersion":"1.6.1.0","CFBundleIdentifier":"edu.ucsf.cgl.ChimeraX"},
"storeInfo" : {"deviceIdentifierForVendor":"8BD5E9EC-D2DB-502E-BB41-CA39E72FEB77","thirdParty":true},
"parentProc" : "launchd",
"parentPid" : 1,
"coalitionName" : "edu.ucsf.cgl.ChimeraX",
"crashReporterKey" : "550A96AF-BA62-8144-E31A-B6F57ADEE0A8",
"codeSigningID" : "edu.ucsf.cgl.ChimeraX",
"codeSigningTeamID" : "LWV8X224YF",
"codeSigningFlags" : 570491649,
"codeSigningValidationCategory" : 6,
"codeSigningTrustLevel" : 0,
"wakeTime" : 8398,
"sleepWakeUUID" : "183E273B-6276-416D-8BFA-32C634080162",
"sip" : "enabled",
"vmRegionInfo" : "0x18 is not in any region. Bytes before following region: 140722914017256\n REGION TYPE START - END [ VSIZE] PRT\/MAX SHRMOD REGION DETAIL\n UNUSED SPACE AT START\n---> \n mapped file 7ffc9b4d4000-7ffcaa608000 [241.2M] r-x\/r-x SM=COW ...t_id=4ce800bb",
"exception" : {"codes":"0x0000000000000001, 0x0000000000000018","rawCodes":[1,24],"type":"EXC_BAD_ACCESS","signal":"SIGSEGV","subtype":"KERN_INVALID_ADDRESS at 0x0000000000000018"},
"ktriageinfo" : "VM - (arg = 0x0) pmap_enter retried due to resource shortage\n",
"vmregioninfo" : "0x18 is not in any region. Bytes before following region: 140722914017256\n REGION TYPE START - END [ VSIZE] PRT\/MAX SHRMOD REGION DETAIL\n UNUSED SPACE AT START\n---> \n mapped file 7ffc9b4d4000-7ffcaa608000 [241.2M] r-x\/r-x SM=COW ...t_id=4ce800bb",
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"faultingThread" : 0,
"threads" : 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===== Log before crash start =====
Startup Messages
---
warning | Replacing fetcher for 'pdb_nmr' and format NMRSTAR from NMRSTAR
bundle with that from NMRSTAR bundle
UCSF ChimeraX version: 1.6.1 (2023-05-09)
© 2016-2023 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open /Users/pujanajmera/Downloads/MoreCys.xyz
opened MoreCys.xyz as an XYZ coordinate file
> select /a:1@H37
1 atom, 1 residue, 1 model selected
> select up
84 atoms, 83 bonds, 1 residue, 1 model selected
> select up
84 atoms, 83 bonds, 1 residue, 1 model selected
> select clear
> open /Users/pujanajmera/Downloads/OneCys.xyz
opened OneCys.xyz as an XYZ coordinate file
> select up
2 atoms, 1 bond, 1 residue, 1 model selected
> select up
22 atoms, 21 bonds, 1 residue, 1 model selected
> hide #2 models
> hide #1 models
> close
> open /Users/pujanajmera/Downloads/2Z8Q_H.pdb
Summary of feedback from opening /Users/pujanajmera/Downloads/2Z8Q_H.pdb
---
warnings | CONECT record to nonexistent atom: (177, 183)
CONECT record to nonexistent atom: (215, 220)
CONECT record to nonexistent atom: (261, 271)
CONECT record to nonexistent atom: (917, 922)
Chain information for 2Z8Q_H.pdb #1
---
Chain | Description
A | No description available
> ui tool show "Altloc Explorer"
> hbonds /A:10-11,17-21,45-46,48-49,54-55,65-66 & @@num_alt_locs>1 interModel
> false reveal true name "altloc H-bonds" updateGroup true
13 hydrogen bonds found
> altlocs change B /A:10
Changed /A THR 10 to alternate location B
> hbonds /A:11 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> hbonds /A:10 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> altlocs change A /A:10
Changed /A THR 10 to alternate location A
> hbonds /A:11 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> hbonds /A:10 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
2 hydrogen bonds found
> altlocs change B /A:10
Changed /A THR 10 to alternate location B
> hbonds /A:11 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> hbonds /A:10 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> altlocs change A /A:10
Changed /A THR 10 to alternate location A
> hbonds /A:11 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> hbonds /A:10 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
2 hydrogen bonds found
> altlocs change B /A:11
Changed /A CYS 11 to alternate location B
> hbonds /A:10 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> hbonds /A:11 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> altlocs change A /A:11
Changed /A CYS 11 to alternate location A
> hbonds /A:10 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
2 hydrogen bonds found
> hbonds /A:11 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> altlocs change B /A:11
Changed /A CYS 11 to alternate location B
> hbonds /A:10 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> hbonds /A:11 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> altlocs change A /A:11
Changed /A CYS 11 to alternate location A
> hbonds /A:10 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
2 hydrogen bonds found
> hbonds /A:11 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> altlocs change B /A:17
Changed /A CYS 17 to alternate location B
> hbonds /A:18 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
0 hydrogen bonds found
> hbonds /A:17 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
2 hydrogen bonds found
> altlocs change A /A:17
Changed /A CYS 17 to alternate location A
> hbonds /A:18 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
0 hydrogen bonds found
> hbonds /A:17 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> altlocs change B /A:11
Changed /A CYS 11 to alternate location B
> hbonds /A:10 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> hbonds /A:11 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> altlocs change A /A:11
Changed /A CYS 11 to alternate location A
> hbonds /A:10 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
2 hydrogen bonds found
> hbonds /A:11 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> show target ab
> altlocs change B /A:10
Changed /A THR 10 to alternate location B
> hbonds /A:11 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> hbonds /A:10 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> altlocs change A /A:10
Changed /A THR 10 to alternate location A
> hbonds /A:11 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> hbonds /A:10 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
2 hydrogen bonds found
> altlocs change B /A:11
Changed /A CYS 11 to alternate location B
> hbonds /A:10 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> hbonds /A:11 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> altlocs change A /A:11
Changed /A CYS 11 to alternate location A
> hbonds /A:10 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
2 hydrogen bonds found
> hbonds /A:11 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> altlocs change B /A:17
Changed /A CYS 17 to alternate location B
> hbonds /A:18 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
0 hydrogen bonds found
> hbonds /A:17 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
2 hydrogen bonds found
> altlocs change A /A:17
Changed /A CYS 17 to alternate location A
> hbonds /A:18 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
0 hydrogen bonds found
> hbonds /A:17 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> altlocs change B /A:17
Changed /A CYS 17 to alternate location B
> hbonds /A:18 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
0 hydrogen bonds found
> hbonds /A:17 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
2 hydrogen bonds found
> close #1
> open /Users/pujanajmera/TmoleXProject_1/Downloads/2Z8Q_H_renum.pdb
Chain information for 2Z8Q_H_renum.pdb #1
---
Chain | Description
A | No description available
> open /Users/pujanajmera/TmoleXProject_1/Downloads/2z8q.pdb
> /Users/pujanajmera/Downloads/2z8q.pdb
> /Users/pujanajmera/TmoleXProject_1/Downloads/2Z8Q_H.pdb
> /Users/pujanajmera/TmoleXProject_1/Downloads/1_2Z8Q_hydrogenated_WT_noCO2.pdb
> /Users/pujanajmera/TmoleXProject/Downloads/1_2Z8Q_hydrogenated_WT_noCO2.pdb
> /Users/pujanajmera/Downloads/1_2Z8Q_hydrogenated_WT_noCO2.pdb
Chain information for 2z8q.pdb #2
---
Chain | Description
A | No description available
Chain information for 2z8q.pdb #3
---
Chain | Description
A | No description available
Chain information for 2Z8Q_H.pdb #4
---
Chain | Description
A | No description available
Chain information for 1_2Z8Q_hydrogenated_WT_noCO2.pdb #5
---
Chain | Description
B | No description available
Chain information for 1_2Z8Q_hydrogenated_WT_noCO2.pdb #6
---
Chain | Description
B | No description available
Chain information for 1_2Z8Q_hydrogenated_WT_noCO2.pdb #7
---
Chain | Description
B | No description available
> close #1
> hide #!3 models
> hide #!4 models
> hide #!5 models
> hide #!6 models
> hide #!7 models
> show #!3 models
> hide #!2 models
> close #2-3
> show #!4 models
> close #4
> show #!5 models
> show #!6 models
> show #!7 models
> hide #!5 models
> hide #!6 models
> show #!6 models
> show #!5 models
> hide #!6 models
> show #!6 models
> hide #!5 models
> hide #!7 models
> show #!7 models
> hide #!6 models
> show #!5 models
> hide #!7 models
> show #!6 models
> show #!7 models
> select add #7
968 atoms, 979 bonds, 3 pseudobonds, 67 residues, 2 models selected
> select subtract #7
Nothing selected
> select add #6
968 atoms, 979 bonds, 3 pseudobonds, 67 residues, 2 models selected
> select subtract #6
Nothing selected
> select add #5
968 atoms, 979 bonds, 3 pseudobonds, 67 residues, 2 models selected
> select subtract #5
Nothing selected
> close #5-6
> hbonds /B:19-20 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
2 hydrogen bonds found
> altlocs change B /B:19
Changed /B SER 19 to alternate location B
> hbonds /B:20 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> hbonds /B:19 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> altlocs change A /B:19
Changed /B SER 19 to alternate location A
> hbonds /B:20 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> hbonds /B:19 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> show /B:19
> view /B:19
> altlocs change B /B:19
Changed /B SER 19 to alternate location B
> hbonds /B:20 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> hbonds /B:19 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> altlocs change A /B:19
Changed /B SER 19 to alternate location A
> hbonds /B:20 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> hbonds /B:19 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> show /B:20
> view /B:20
> altlocs change B /B:20
Changed /B LEU 20 to alternate location B
> hbonds /B:19 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> hbonds /B:20 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> altlocs change A /B:20
Changed /B LEU 20 to alternate location A
> hbonds /B:19 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> hbonds /B:20 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> altlocs change B /B:20
Changed /B LEU 20 to alternate location B
> hbonds /B:19 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> hbonds /B:20 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> altlocs change A /B:20
Changed /B LEU 20 to alternate location A
> hbonds /B:19 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> hbonds /B:20 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> altlocs change B /B:19
Changed /B SER 19 to alternate location B
> hbonds /B:20 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> hbonds /B:19 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> altlocs change A /B:20
Changed /B LEU 20 to alternate location A
> hbonds /B:19 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> hbonds /B:20 & @@num_alt_locs>1 interModel false reveal true name "altloc
> H-bonds" updateGroup true
1 hydrogen bonds found
> open /Users/pujanajmera/Downloads/1_hivprot_run1.pdb
Chain information for 1_hivprot_run1.pdb #1
---
Chain | Description
Z | No description available
> view #1 clip false
> hide #!7 models
> show #1 target ab
Drag select of 10 atoms, 3 residues, 5 bonds
> select clear
> ui mousemode right zoom
> select protein
4237 atoms, 4271 bonds, 2 pseudobonds, 273 residues, 3 models selected
> select add #7
4245 atoms, 4283 bonds, 5 pseudobonds, 274 residues, 4 models selected
> select subtract #7
3277 atoms, 3304 bonds, 207 residues, 1 model selected
> hide #* target a
> show sel target ab
> hide sel target a
> select clear
> select #1/Z:25
12 atoms, 11 bonds, 1 residue, 1 model selected
> select #1/Z:124
13 atoms, 12 bonds, 1 residue, 1 model selected
> select add #1/Z:25
25 atoms, 23 bonds, 2 residues, 1 model selected
> show sel target ab
> select sel : show sel target ab
> select clear
> select #1/Z:203
21 atoms, 21 bonds, 1 residue, 1 model selected
> select up
169 atoms, 170 bonds, 10 residues, 1 model selected
> select subtract #1/Z:198
148 atoms, 149 bonds, 9 residues, 1 model selected
> hide (sel-residues & (protein|nucleic)) target a
> cartoon hide sel-residues
> show (sel-residues & backbone) target ab
> select clear
> select #1/Z:203@CA
1 atom, 1 residue, 1 model selected
> show sel target ab
> show (sel-residues & sidechain) target ab
> select clear
> select #1/Z:124@OD2
1 atom, 1 residue, 1 model selected
> select up
13 atoms, 12 bonds, 1 residue, 1 model selected
> select clear
> select add #1/Z:124@HD2
1 atom, 1 residue, 1 model selected
> select sel @ show sel target ab
> select clear
> select #1/Z:124@HD2
1 atom, 1 residue, 1 model selected
> select clear
> show #1 target ab
> select #1/Z:124@HD2
1 atom, 1 residue, 1 model selected
> select sel @ select sel @ select sel @ select sel @ select sel @ select sel @
Log:
Startup Messages
---
warning | Replacing fetcher for 'pdb_nmr' and format NMRSTAR from NMRSTAR
bundle with that from NMRSTAR bundle
UCSF ChimeraX version: 1.6.1 (2023-05-09)
© 2016-2023 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 Metal - 83.1
OpenGL renderer: Apple M1 Pro
OpenGL vendor: Apple
Python: 3.9.11
Locale: UTF-8
Qt version: PyQt6 6.4.2, Qt 6.4.2
Qt runtime version: 6.4.3
Qt platform: cocoa
Hardware:
Hardware Overview:
Model Name: MacBook Pro
Model Identifier: MacBookPro18,3
Model Number: MKGP3LL/A
Chip: Unknown
Total Number of Cores: 8 (6 performance and 2 efficiency)
Memory: 16 GB
System Firmware Version: 8422.121.1
OS Loader Version: 8422.121.1
Software:
System Software Overview:
System Version: macOS 13.4 (22F66)
Kernel Version: Darwin 22.5.0
Time since boot: 109 days, 34 minutes
Graphics/Displays:
Apple M1 Pro:
Chipset Model: Apple M1 Pro
Type: GPU
Bus: Built-In
Total Number of Cores: 14
Vendor: Apple (0x106b)
Metal Support: Metal 3
Displays:
Color LCD:
Display Type: Built-in Liquid Retina XDR Display
Resolution: 3024 x 1964 Retina
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: Yes
Connection Type: Internal
Installed Packages:
alabaster: 0.7.13
appdirs: 1.4.4
appnope: 0.1.3
asttokens: 2.2.1
Babel: 2.12.1
backcall: 0.2.0
beautifulsoup4: 4.11.2
blockdiag: 3.0.0
build: 0.10.0
certifi: 2021.10.8
cftime: 1.6.2
charset-normalizer: 3.1.0
ChimeraX-AddCharge: 1.5.9.1
ChimeraX-AddH: 2.2.5
ChimeraX-AlignmentAlgorithms: 2.0.1
ChimeraX-AlignmentHdrs: 3.3.1
ChimeraX-AlignmentMatrices: 2.1
ChimeraX-Alignments: 2.9.3
ChimeraX-AlphaFold: 1.0
ChimeraX-AltlocExplorer: 1.0.3
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.1
ChimeraX-Atomic: 1.43.10
ChimeraX-AtomicLibrary: 10.0.6
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.3.2
ChimeraX-BasicActions: 1.1.2
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.1.2
ChimeraX-BondRot: 2.0.1
ChimeraX-BugReporter: 1.0.1
ChimeraX-BuildStructure: 2.8
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.2.2
ChimeraX-ButtonPanel: 1.0.1
ChimeraX-CageBuilder: 1.0.1
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.3.2
ChimeraX-ChangeChains: 1.0.2
ChimeraX-CheckWaters: 1.3.1
ChimeraX-ChemGroup: 2.0.1
ChimeraX-Clashes: 2.2.4
ChimeraX-ColorActions: 1.0.3
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.3
ChimeraX-CommandLine: 1.2.5
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0.1
ChimeraX-Core: 1.6.1
ChimeraX-CoreFormats: 1.1
ChimeraX-coulombic: 1.4.2
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0.1
ChimeraX-DataFormats: 1.2.3
ChimeraX-Dicom: 1.2
ChimeraX-DistMonitor: 1.4
ChimeraX-DockPrep: 1.1.1
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ESMFold: 1.0
ChimeraX-FileHistory: 1.0.1
ChimeraX-FunctionKey: 1.0.1
ChimeraX-Geometry: 1.3
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1.1
ChimeraX-Hbonds: 2.4
ChimeraX-Help: 1.2.1
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ItemsInspection: 1.0.1
ChimeraX-Label: 1.1.7
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.5
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.2
ChimeraX-Map: 1.1.4
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0.1
ChimeraX-MapFilter: 2.0.1
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1.1
ChimeraX-Markers: 1.0.1
ChimeraX-Mask: 1.0.2
ChimeraX-MatchMaker: 2.0.12
ChimeraX-MDcrds: 2.6
ChimeraX-MedicalToolbar: 1.0.2
ChimeraX-Meeting: 1.0.1
ChimeraX-MLP: 1.1.1
ChimeraX-mmCIF: 2.12
ChimeraX-MMTF: 2.2
ChimeraX-Modeller: 1.5.9
ChimeraX-ModelPanel: 1.3.7
ChimeraX-ModelSeries: 1.0.1
ChimeraX-Mol2: 2.0
ChimeraX-Mole: 1.0
ChimeraX-Morph: 1.0.2
ChimeraX-MouseModes: 1.2
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nifti: 1.0
ChimeraX-NRRD: 1.0
ChimeraX-Nucleotides: 2.0.3
ChimeraX-OpenCommand: 1.10.1
ChimeraX-PDB: 2.7.2
ChimeraX-PDBBio: 1.0
ChimeraX-PDBLibrary: 1.0.2
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0.1
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1
ChimeraX-PubChem: 2.1
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-RenderByAttr: 1.1
ChimeraX-RenumberResidues: 1.1
ChimeraX-ResidueFit: 1.0.1
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 3.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5.1
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0.1
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0.1
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.8.3
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0.1
ChimeraX-Shortcuts: 1.1.1
ChimeraX-ShowSequences: 1.0.1
ChimeraX-SideView: 1.0.1
ChimeraX-Smiles: 2.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.10.3
ChimeraX-STL: 1.0.1
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.1.2
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0.1
ChimeraX-SwapAA: 2.0.1
ChimeraX-SwapRes: 2.2.1
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.1.2
ChimeraX-ToolshedUtils: 1.2.1
ChimeraX-Topography: 1.0
ChimeraX-Tug: 1.0.1
ChimeraX-UI: 1.28.4
ChimeraX-uniprot: 2.2.2
ChimeraX-UnitCell: 1.0.1
ChimeraX-ViewDockX: 1.2
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0.1
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0.2
ChimeraX-WebServices: 1.1.1
ChimeraX-Zone: 1.0.1
colorama: 0.4.6
comm: 0.1.3
contourpy: 1.0.7
cxservices: 1.2.2
cycler: 0.11.0
Cython: 0.29.33
debugpy: 1.6.7
decorator: 5.1.1
docutils: 0.19
executing: 1.2.0
filelock: 3.9.0
fonttools: 4.39.3
funcparserlib: 1.0.1
grako: 3.16.5
h5py: 3.8.0
html2text: 2020.1.16
idna: 3.4
ihm: 0.35
imagecodecs: 2022.9.26
imagesize: 1.4.1
importlib-metadata: 6.6.0
ipykernel: 6.21.1
ipython: 8.10.0
ipython-genutils: 0.2.0
ipywidgets: 8.0.6
jedi: 0.18.2
Jinja2: 3.1.2
jupyter-client: 8.0.2
jupyter-core: 5.3.0
jupyterlab-widgets: 3.0.7
kiwisolver: 1.4.4
line-profiler: 4.0.2
lxml: 4.9.2
lz4: 4.3.2
MarkupSafe: 2.1.2
matplotlib: 3.6.3
matplotlib-inline: 0.1.6
MolecularDynamicsViewer: 1.4
msgpack: 1.0.4
nest-asyncio: 1.5.6
netCDF4: 1.6.2
networkx: 2.8.8
nibabel: 5.0.1
nptyping: 2.5.0
numexpr: 2.8.4
numpy: 1.23.5
openvr: 1.23.701
packaging: 21.3
ParmEd: 3.4.3
parso: 0.8.3
pep517: 0.13.0
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 9.3.0
pip: 23.0
pkginfo: 1.9.6
platformdirs: 3.5.0
prompt-toolkit: 3.0.38
psutil: 5.9.4
ptyprocess: 0.7.0
pure-eval: 0.2.2
pycollada: 0.7.2
pydicom: 2.3.0
Pygments: 2.14.0
pynrrd: 1.0.0
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 3.0.9
pyproject-hooks: 1.0.0
PyQt6-commercial: 6.4.2
PyQt6-Qt6: 6.4.3
PyQt6-sip: 13.4.1
PyQt6-WebEngine-commercial: 6.4.0
PyQt6-WebEngine-Qt6: 6.4.3
python-dateutil: 2.8.2
pytz: 2023.3
pyzmq: 25.0.2
qtconsole: 5.4.0
QtPy: 2.3.1
RandomWords: 0.4.0
requests: 2.28.2
scipy: 1.9.3
Send2Trash: 1.8.2
SEQCROW: 1.6.6
setuptools: 67.4.0
setuptools-scm: 7.0.5
sfftk-rw: 0.7.3
six: 1.16.0
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
soupsieve: 2.4.1
sphinx: 6.1.3
sphinx-autodoc-typehints: 1.22
sphinxcontrib-applehelp: 1.0.4
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 2.0.1
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.5
stack-data: 0.6.2
tables: 3.7.0
tcia-utils: 1.2.0
tifffile: 2022.10.10
tinyarray: 1.2.4
tomli: 2.0.1
tornado: 6.3.1
traitlets: 5.9.0
typing-extensions: 4.5.0
tzdata: 2023.3
urllib3: 1.26.15
wcwidth: 0.2.6
webcolors: 1.12
wheel: 0.38.4
wheel-filename: 1.4.1
widgetsnbextension: 4.0.7
zipp: 3.15.0
Change History (2)
comment:1 by , 18 months ago
| Cc: | added |
|---|---|
| Component: | Unassigned → Window Toolkit |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → accepted |
| Summary: | ChimeraX bug report submission → Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device returned engine == 0 |
comment:2 by , 18 months ago
| Resolution: | → duplicate |
|---|---|
| Status: | accepted → closed |
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