Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device returned engine == 0

[chimerax-bug-report@…]

The following bug report has been submitted:
Platform:        macOS-11.6-arm64-arm-64bit
ChimeraX Version: 1.6.1 (2023-05-09 17:57:07 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Fatal Python error: Segmentation fault

Current thread 0x0000000100883d40 (most recent call first):
  File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/ui/gui.py", line 275 in event_loop
  File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/__main__.py", line 892 in init
  File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/__main__.py", line 1043 in 
  File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 87 in _run_code
  File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 197 in _run_module_as_main


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{
  "uptime" : 190000,
  "procLaunch" : "2024-02-27 16:39:07.5735 +0100",
  "procRole" : "Background",
  "version" : 2,
  "exception" : {
    "type" : "EXC_BAD_ACCESS",
    "signal" : "SIGSEGV",
    "subtype" : "KERN_INVALID_ADDRESS at 0x0000000000000018"
  },
  "userID" : 501,
  "modelCode" : "MacBookAir10,1",
  "coalitionID" : 3905,
  "osVersion" : {
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    "build" : "20G165",
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  "captureTime" : "2024-02-27 18:39:05.6624 +0100",
  "incident" : "502D3F75-7F4C-479C-AF8E-02297E7B8A79",
  "pid" : 21673,
  "translated" : false,
  "cpuType" : "ARM-64",
  "procName" : "ChimeraX",
  "procPath" : "\/Applications\/ChimeraX-1.6.1.app\/Contents\/MacOS\/ChimeraX",
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  "parentPid" : 1,
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  "crashReporterKey" : "C4F220A7-216F-F6FD-FA2A-852D8B17E35D",
  "wakeTime" : 23018,
  "sleepWakeUUID" : "40C73271-6EFD-42E0-914A-70B9588E636B",
  "sip" : "enabled",
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    "base" : 6034997248,
    "size" : 622592,
    "uuid" : "9bbd9cd5-9744-3792-98aa-5f539f0bbb36",
    "path" : "\/Applications\/ChimeraX-1.6.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.9\/lib\/python3.9\/site-packages\/PyQt6\/Qt6\/plugins\/platforms\/libqcocoa.dylib",
    "name" : "libqcocoa.dylib"
  },
  {
    "source" : "P",
    "arch" : "arm64e",
    "base" : 7008886784,
    "size" : 3723264,
    "uuid" : "a23d1d3a-ad28-3ac2-aeaf-53f4b7a5b2f5",
    "path" : "\/System\/Library\/Frameworks\/Foundation.framework\/Versions\/C\/Foundation",
    "name" : "Foundation"
  },
  {
    "source" : "P",
    "arch" : "arm64e",
    "base" : 6994436096,
    "size" : 4911104,
    "uuid" : "1fc1bd60-dc83-3cc7-89ac-d734dc18473a",
    "path" : "\/System\/Library\/Frameworks\/CoreFoundation.framework\/Versions\/A\/CoreFoundation",
    "name" : "CoreFoundation"
  },
  {
    "source" : "P",
    "arch" : "arm64e",
    "base" : 7036583936,
    "size" : 13901824,
    "uuid" : "53554311-bef7-3421-8a80-edfbefd40209",
    "path" : "\/System\/Library\/Frameworks\/AppKit.framework\/Versions\/C\/AppKit",
    "name" : "AppKit"
  },
  {
    "source" : "P",
    "arch" : "arm64e",
    "base" : 7070253056,
    "size" : 3600384,
    "uuid" : "42d48bb2-b5b8-36eb-89b5-dec02fad414b",
    "path" : "\/System\/Library\/PrivateFrameworks\/SkyLight.framework\/Versions\/A\/SkyLight",
    "name" : "SkyLight"
  },
  {
    "source" : "P",
    "arch" : "arm64e",
    "base" : 6992150528,
    "size" : 282624,
    "uuid" : "4edd5f72-2296-3891-b2a1-6741db6c05c9",
    "path" : "\/usr\/lib\/system\/libdispatch.dylib",
    "name" : "libdispatch.dylib"
  },
  {
    "source" : "P",
    "arch" : "arm64e",
    "base" : 7128092672,
    "size" : 3190784,
    "uuid" : "b4b0cab2-cef2-318d-b443-381a1a89c07a",
    "path" : "\/System\/Library\/Frameworks\/Carbon.framework\/Versions\/A\/Frameworks\/HIToolbox.framework\/Versions\/A\/HIToolbox",
    "name" : "HIToolbox"
  },
  {
    "source" : "P",
    "arch" : "arm64",
    "base" : 4304207872,
    "size" : 2555904,
    "uuid" : "5ee765c2-b52f-3980-9781-73db1abd2bde",
    "path" : "\/Applications\/ChimeraX-1.6.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.9\/Python",
    "name" : "Python"
  },
  {
    "source" : "P",
    "arch" : "arm64",
    "base" : 4301012992,
    "size" : 16384,
    "uuid" : "a5992708-d5b4-36ec-ac0a-e525f6105b56",
    "path" : "\/Applications\/ChimeraX-1.6.1.app\/Contents\/MacOS\/ChimeraX",
    "name" : "ChimeraX"
  },
  {
    "source" : "P",
    "arch" : "arm64e",
    "base" : 6993956864,
    "size" : 270336,
    "uuid" : "be0b539a-2edf-3a99-9632-731c5928bbac",
    "path" : "\/usr\/lib\/system\/libdyld.dylib",
    "name" : "libdyld.dylib"
  },
  {
    "source" : "P",
    "arch" : "arm64",
    "base" : 4349247488,
    "size" : 20709376,
    "uuid" : "6b8373ed-7142-34ea-9b4b-9f502e8a6f33",
    "path" : "\/Applications\/ChimeraX-1.6.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.9\/lib\/python3.9\/site-packages\/numpy\/.dylibs\/libopenblas64_.0.dylib",
    "name" : "libopenblas64_.0.dylib"
  },
  {
    "source" : "P",
    "arch" : "arm64",
    "base" : 5850300416,
    "size" : 154959872,
    "uuid" : "1b766dc4-2490-3425-8726-45387675bc14",
    "path" : "\/Applications\/ChimeraX-1.6.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.9\/lib\/python3.9\/site-packages\/PyQt6\/Qt6\/lib\/QtWebEngineCore.framework\/Versions\/A\/QtWebEngineCore",
    "name" : "QtWebEngineCore"
  },
  {
    "source" : "P",
    "arch" : "arm64e",
    "base" : 6991167488,
    "size" : 229376,
    "uuid" : "0e990c5d-c4f7-304a-9714-4409647cc2ef",
    "path" : "\/usr\/lib\/system\/libxpc.dylib",
    "name" : "libxpc.dylib"
  },
  {
    "source" : "P",
    "arch" : "arm64e",
    "base" : 8101998592,
    "size" : 24576,
    "uuid" : "1a2dd0b4-1c56-3c7b-b5b7-06af9f73d3d7",
    "path" : "\/System\/Library\/Frameworks\/OpenGL.framework\/Versions\/A\/Libraries\/libCoreVMClient.dylib",
    "name" : "libCoreVMClient.dylib"
  },
  {
    "source" : "P",
    "arch" : "arm64e",
    "base" : 8102088704,
    "size" : 12288,
    "uuid" : "75509f55-33a5-3a15-8a37-6ee18c772015",
    "path" : "\/System\/Library\/Frameworks\/OpenGL.framework\/Versions\/A\/Libraries\/libCVMSPluginSupport.dylib",
    "name" : "libCVMSPluginSupport.dylib"
  },
  {
    "size" : 0,
    "source" : "A",
    "base" : 0,
    "uuid" : "00000000-0000-0000-0000-000000000000"
  }
],
  "vmSummary" : "ReadOnly portion of Libraries: Total=1.1G resident=0K(0%) swapped_out_or_unallocated=1.1G(100%)\nWritable regions: Total=2.7G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=2.7G(100%)\n\n                                VIRTUAL   REGION \nREGION TYPE                        SIZE    COUNT (non-coalesced) \n===========                     =======  ======= \nAccelerate framework               512K        4 \nActivity Tracing                   256K        1 \nCG backing stores                 7760K       19 \nCG image                          1040K       42 \nCoreAnimation                     8080K      443 \nCoreGraphics                        80K        5 \nCoreUI image data                 2544K       37 \nFoundation                          48K        2 \nKernel Alloc Once                   32K        1 \nMALLOC                             1.5G      275 \nMALLOC guard page                  192K       10 \nMALLOC_MEDIUM (reserved)         696.0M        8         reserved VM address space (unallocated)\nMach message                        96K        4 \nOpenGL GLSL                        384K        4 \nSTACK GUARD                        704K       44 \nStack                            166.1M       45 \nStack Guard                       56.0M        1 \nVM_ALLOCATE                      287.4M      422 \nVM_ALLOCATE (reserved)           160.0M        2         reserved VM address space (unallocated)\n__AUTH                            1074K      275 \n__AUTH_CONST                      15.8M      467 \n__DATA                            18.5M      604 \n__DATA_CONST                      26.0M      607 \n__DATA_DIRTY                      1833K      222 \n__FONT_DATA                          4K        1 \n__GLSLBUILTINS                    5176K        1 \n__LINKEDIT                       518.6M      148 \n__OBJC_CONST                      3411K      264 \n__OBJC_RO                         75.1M        1 \n__OBJC_RW                         2576K        1 \n__TEXT                           586.8M      627 \n__UNICODE                          588K        1 \nmapped file                      296.2M       56 \nshared memory                     3312K       28 \n===========                     =======  ======= \nTOTAL                              4.3G     4672 \nTOTAL, minus reserved VM space     3.5G     4672 \n",
  "legacyInfo" : {
  "threadTriggered" : {
    "name" : "CrBrowserMain",
    "queue" : "com.apple.main-thread"
  }
}
}
===== Log before crash start =====
Startup Messages  
---  
warning | Replacing fetcher for 'pdb_nmr' and format NMRSTAR from NMRSTAR
bundle with that from NMRSTAR bundle  
  
UCSF ChimeraX version: 1.6.1 (2023-05-09)  
© 2016-2023 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open /Users/zchen/Desktop/ESX4_modeling/j213_refined.pdb format pdb

Chain information for j213_refined.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
C | No description available  
D | No description available  
E | No description available  
F | No description available  
G | No description available  
H | No description available  
I | No description available  
  

> show atoms

> hide atoms

> show atoms

> hide atoms

> show atoms

> show cartoons

> hide cartoons

> style stick

Changed 26264 atom styles  

> hide atoms

> show atoms

> style stick

Changed 26264 atom styles  

> style stick

Changed 26264 atom styles  

> style stick

Changed 26264 atom styles  

> style stick

Changed 26264 atom styles  

> show cartoons

> open /Users/zchen/Downloads/cryosparc_P109_J3591_006_volume_map.mrc

Opened cryosparc_P109_J3591_006_volume_map.mrc as #2, grid size 380,380,380,
pixel 0.89, shown at level 0.0626, step 2, values float32  

> volume #2 step 1

> transparency 50

> volume #2 level 0.07079

> volume #2 level 0.06594

> ui mousemode right zoom

> volume #2 level 0.07176

> lighting full

> set bgColor white

> color #2 #b254b2ff models

> color #2 #b259b2ff models

> transparency 50

> transparency 0

> transparency 50

> hide #!1 models

> color #1 #fb9190ff

> hide #!2 models

> show #!1 models

> preset "overall look" "publication 1 (silhouettes)"

Using preset: Overall Look / Publication 1 (Silhouettes)  
Preset expands to these ChimeraX commands:

    
    
    set bg white
    graphics silhouettes t
    lighting depthCue f

  

> hide cartoons

> show cartoons

> select add #1

26264 atoms, 26818 bonds, 4 pseudobonds, 3591 residues, 2 models selected  

> select /A

3172 atoms, 3250 bonds, 434 residues, 1 model selected  

> cartoon hide sel

> cartoon sel

> show sel cartoons

> hide sel cartoons

> show sel atoms

> hide sel atoms

> show sel atoms

> hide sel atoms

> show sel atoms

> style sel stick

Changed 3172 atom styles  

> style sel stick

Changed 3172 atom styles  

> style sel sphere

Changed 3172 atom styles  

> style sel sphere

Changed 3172 atom styles  

> style sel stick

Changed 3172 atom styles  

> show sel cartoons

> select ~sel

23092 atoms, 23568 bonds, 4 pseudobonds, 3157 residues, 4 models selected  

> cartoon hide (#!1 & sel)

> hide (#!1 & sel) target a

> show #!2 models

> volume #2 level 0.1023

> volume #2 level 0.09549

> select add #1

26264 atoms, 26818 bonds, 4 pseudobonds, 3591 residues, 4 models selected  

> select subtract #1

2 models selected  

> select add #1

26264 atoms, 26818 bonds, 4 pseudobonds, 3591 residues, 4 models selected  

> hide #!2 models

> show #!2 models

> hide #!2 models

> show #!2 models

> hide #!2 models

> select subtract #2

26264 atoms, 26818 bonds, 4 pseudobonds, 3591 residues, 2 models selected  

> cartoon hide (#!1 & sel)

> cartoon (#!1 & sel)

> set bgColor black

> set bgColor transparent

> select subtract #1

Nothing selected  

> select add #1

26264 atoms, 26818 bonds, 4 pseudobonds, 3591 residues, 2 models selected  

> select subtract #1

Nothing selected  

> hide #!1 models

> show #!1 models

> hide #!1 models

> show #!1 models

> select /A

3172 atoms, 3250 bonds, 434 residues, 1 model selected  

> select /B

2446 atoms, 2491 bonds, 1 pseudobond, 346 residues, 2 models selected  

> select /C

2530 atoms, 2581 bonds, 1 pseudobond, 360 residues, 2 models selected  

> select /D

2502 atoms, 2551 bonds, 1 pseudobond, 355 residues, 2 models selected  

> select /E

2473 atoms, 2520 bonds, 1 pseudobond, 349 residues, 2 models selected  

> select /F

3022 atoms, 3091 bonds, 396 residues, 1 model selected  

> select /G

3015 atoms, 3084 bonds, 395 residues, 1 model selected  

> select /H

3517 atoms, 3589 bonds, 473 residues, 1 model selected  

> select /I

3587 atoms, 3661 bonds, 483 residues, 1 model selected  

Unsupported scale factor (0.000000) detected on Display0  

QPainter::begin: Paint device returned engine == 0, type: 3  


===== Log before crash end =====

Log:
Startup Messages  
---  
warning | Replacing fetcher for 'pdb_nmr' and format NMRSTAR from NMRSTAR
bundle with that from NMRSTAR bundle  
  
UCSF ChimeraX version: 1.6.1 (2023-05-09)  
© 2016-2023 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  




OpenGL version: 4.1 Metal - 71.7.1
OpenGL renderer: Apple M1
OpenGL vendor: Apple

Python: 3.9.11
Locale: UTF-8
Qt version: PyQt6 6.4.2, Qt 6.4.2
Qt runtime version: 6.4.3
Qt platform: cocoa
Hardware:

    Hardware Overview:

      Model Name: MacBook Air
      Model Identifier: MacBookAir10,1
      Chip: Apple M1
      Total Number of Cores: 8 (4 performance and 4 efficiency)
      Memory: 16 GB
      System Firmware Version: 6723.140.2
      OS Loader Version: 6723.140.2

Software:

    System Software Overview:

      System Version: macOS 11.6 (20G165)
      Kernel Version: Darwin 20.6.0
      Time since boot: 12 days 4:39

Graphics/Displays:

    Apple M1:

      Chipset Model: Apple M1
      Type: GPU
      Bus: Built-In
      Total Number of Cores: 8
      Vendor: Apple (0x106b)
      Metal Family: Supported, Metal GPUFamily Apple 7
      Displays:
        Dell P2720D:
          Resolution: 2560 x 1440 (QHD/WQHD - Wide Quad High Definition)
          UI Looks like: 2560 x 1440 @ 60.00Hz
          Main Display: Yes
          Mirror: Off
          Online: Yes
          Rotation: Supported
          Automatically Adjust Brightness: Yes
        Dell P2720D:
          Resolution: 2560 x 1440 (QHD/WQHD - Wide Quad High Definition)
          UI Looks like: 2560 x 1440 @ 60.00Hz
          Mirror: Off
          Online: Yes
          Rotation: Supported
          Automatically Adjust Brightness: Yes


Installed Packages:
    alabaster: 0.7.13
    appdirs: 1.4.4
    appnope: 0.1.3
    asttokens: 2.2.1
    Babel: 2.12.1
    backcall: 0.2.0
    beautifulsoup4: 4.11.2
    blockdiag: 3.0.0
    build: 0.10.0
    certifi: 2021.10.8
    cftime: 1.6.2
    charset-normalizer: 3.1.0
    ChimeraX-AddCharge: 1.5.9.1
    ChimeraX-AddH: 2.2.5
    ChimeraX-AlignmentAlgorithms: 2.0.1
    ChimeraX-AlignmentHdrs: 3.3.1
    ChimeraX-AlignmentMatrices: 2.1
    ChimeraX-Alignments: 2.9.3
    ChimeraX-AlphaFold: 1.0
    ChimeraX-AltlocExplorer: 1.0.3
    ChimeraX-AmberInfo: 1.0
    ChimeraX-Arrays: 1.1
    ChimeraX-Atomic: 1.43.10
    ChimeraX-AtomicLibrary: 10.0.6
    ChimeraX-AtomSearch: 2.0.1
    ChimeraX-AxesPlanes: 2.3.2
    ChimeraX-BasicActions: 1.1.2
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 2.1.2
    ChimeraX-BondRot: 2.0.1
    ChimeraX-BugReporter: 1.0.1
    ChimeraX-BuildStructure: 2.8
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.2.2
    ChimeraX-ButtonPanel: 1.0.1
    ChimeraX-CageBuilder: 1.0.1
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.3.2
    ChimeraX-ChangeChains: 1.0.2
    ChimeraX-CheckWaters: 1.3.1
    ChimeraX-ChemGroup: 2.0.1
    ChimeraX-Clashes: 2.2.4
    ChimeraX-ColorActions: 1.0.3
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-ColorKey: 1.5.3
    ChimeraX-CommandLine: 1.2.5
    ChimeraX-ConnectStructure: 2.0.1
    ChimeraX-Contacts: 1.0.1
    ChimeraX-Core: 1.6.1
    ChimeraX-CoreFormats: 1.1
    ChimeraX-coulombic: 1.4.2
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-CrystalContacts: 1.0.1
    ChimeraX-DataFormats: 1.2.3
    ChimeraX-Dicom: 1.2
    ChimeraX-DistMonitor: 1.4
    ChimeraX-DockPrep: 1.1.1
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ESMFold: 1.0
    ChimeraX-FileHistory: 1.0.1
    ChimeraX-FunctionKey: 1.0.1
    ChimeraX-Geometry: 1.3
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.1.1
    ChimeraX-Hbonds: 2.4
    ChimeraX-Help: 1.2.1
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.1
    ChimeraX-ImageFormats: 1.2
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0.1
    ChimeraX-ItemsInspection: 1.0.1
    ChimeraX-Label: 1.1.7
    ChimeraX-ListInfo: 1.1.1
    ChimeraX-Log: 1.1.5
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Maestro: 1.8.2
    ChimeraX-Map: 1.1.4
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0.1
    ChimeraX-MapFilter: 2.0.1
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.1.1
    ChimeraX-Markers: 1.0.1
    ChimeraX-Mask: 1.0.2
    ChimeraX-MatchMaker: 2.0.12
    ChimeraX-MDcrds: 2.6
    ChimeraX-MedicalToolbar: 1.0.2
    ChimeraX-Meeting: 1.0.1
    ChimeraX-MLP: 1.1.1
    ChimeraX-mmCIF: 2.12
    ChimeraX-MMTF: 2.2
    ChimeraX-Modeller: 1.5.9
    ChimeraX-ModelPanel: 1.3.7
    ChimeraX-ModelSeries: 1.0.1
    ChimeraX-Mol2: 2.0
    ChimeraX-Mole: 1.0
    ChimeraX-Morph: 1.0.2
    ChimeraX-MouseModes: 1.2
    ChimeraX-Movie: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nifti: 1.0
    ChimeraX-NRRD: 1.0
    ChimeraX-Nucleotides: 2.0.3
    ChimeraX-OpenCommand: 1.10.1
    ChimeraX-PDB: 2.7.2
    ChimeraX-PDBBio: 1.0
    ChimeraX-PDBLibrary: 1.0.2
    ChimeraX-PDBMatrices: 1.0
    ChimeraX-PickBlobs: 1.0.1
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.1
    ChimeraX-PubChem: 2.1
    ChimeraX-ReadPbonds: 1.0.1
    ChimeraX-Registration: 1.1.1
    ChimeraX-RemoteControl: 1.0
    ChimeraX-RenderByAttr: 1.1
    ChimeraX-RenumberResidues: 1.1
    ChimeraX-ResidueFit: 1.0.1
    ChimeraX-RestServer: 1.1
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 3.0
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.5.1
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0.1
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0.1
    ChimeraX-SelInspector: 1.0
    ChimeraX-SeqView: 2.8.3
    ChimeraX-Shape: 1.0.1
    ChimeraX-Shell: 1.0.1
    ChimeraX-Shortcuts: 1.1.1
    ChimeraX-ShowSequences: 1.0.1
    ChimeraX-SideView: 1.0.1
    ChimeraX-Smiles: 2.1
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.10.3
    ChimeraX-STL: 1.0.1
    ChimeraX-Storm: 1.0
    ChimeraX-StructMeasure: 1.1.2
    ChimeraX-Struts: 1.0.1
    ChimeraX-Surface: 1.0.1
    ChimeraX-SwapAA: 2.0.1
    ChimeraX-SwapRes: 2.2.1
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.1.2
    ChimeraX-ToolshedUtils: 1.2.1
    ChimeraX-Topography: 1.0
    ChimeraX-Tug: 1.0.1
    ChimeraX-UI: 1.28.4
    ChimeraX-uniprot: 2.2.2
    ChimeraX-UnitCell: 1.0.1
    ChimeraX-ViewDockX: 1.2
    ChimeraX-VIPERdb: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0.1
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0.2
    ChimeraX-WebServices: 1.1.1
    ChimeraX-Zone: 1.0.1
    colorama: 0.4.6
    comm: 0.1.3
    contourpy: 1.0.7
    cxservices: 1.2.2
    cycler: 0.11.0
    Cython: 0.29.33
    debugpy: 1.6.7
    decorator: 5.1.1
    docutils: 0.19
    executing: 1.2.0
    filelock: 3.9.0
    fonttools: 4.39.3
    funcparserlib: 1.0.1
    grako: 3.16.5
    h5py: 3.8.0
    html2text: 2020.1.16
    idna: 3.4
    ihm: 0.35
    imagecodecs: 2022.2.22
    imagesize: 1.4.1
    importlib-metadata: 6.6.0
    ipykernel: 6.21.1
    ipython: 8.10.0
    ipython-genutils: 0.2.0
    ipywidgets: 8.0.6
    jedi: 0.18.2
    Jinja2: 3.1.2
    jupyter-client: 8.0.2
    jupyter-core: 5.3.0
    jupyterlab-widgets: 3.0.7
    kiwisolver: 1.4.4
    line-profiler: 4.0.2
    lxml: 4.9.2
    lz4: 4.3.2
    MarkupSafe: 2.1.2
    matplotlib: 3.6.3
    matplotlib-inline: 0.1.6
    msgpack: 1.0.4
    nest-asyncio: 1.5.6
    netCDF4: 1.6.2
    networkx: 2.8.8
    nibabel: 5.0.1
    nptyping: 2.5.0
    numexpr: 2.8.4
    numpy: 1.23.5
    openvr: 1.23.701
    packaging: 21.3
    ParmEd: 3.4.3
    parso: 0.8.3
    pep517: 0.13.0
    pexpect: 4.8.0
    pickleshare: 0.7.5
    Pillow: 9.3.0
    pip: 23.0
    pkginfo: 1.9.6
    platformdirs: 3.5.0
    prompt-toolkit: 3.0.38
    psutil: 5.9.4
    ptyprocess: 0.7.0
    pure-eval: 0.2.2
    pycollada: 0.7.2
    pydicom: 2.3.0
    Pygments: 2.14.0
    pynrrd: 1.0.0
    PyOpenGL: 3.1.5
    PyOpenGL-accelerate: 3.1.5
    pyparsing: 3.0.9
    pyproject-hooks: 1.0.0
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    PyQt6-Qt6: 6.4.3
    PyQt6-sip: 13.4.1
    PyQt6-WebEngine-commercial: 6.4.0
    PyQt6-WebEngine-Qt6: 6.4.3
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    pytz: 2023.3
    pyzmq: 25.0.2
    qtconsole: 5.4.0
    QtPy: 2.3.1
    RandomWords: 0.4.0
    requests: 2.28.2
    scipy: 1.9.3
    setuptools: 67.4.0
    setuptools-scm: 7.0.5
    sfftk-rw: 0.7.3
    six: 1.16.0
    snowballstemmer: 2.2.0
    sortedcontainers: 2.4.0
    soupsieve: 2.4.1
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    sphinx-autodoc-typehints: 1.22
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    sphinxcontrib-blockdiag: 3.0.0
    sphinxcontrib-devhelp: 1.0.2
    sphinxcontrib-htmlhelp: 2.0.1
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 1.0.3
    sphinxcontrib-serializinghtml: 1.1.5
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    tables: 3.7.0
    tcia-utils: 1.2.0
    tifffile: 2022.10.10
    tinyarray: 1.2.4
    tomli: 2.0.1
    tornado: 6.3.1
    traitlets: 5.9.0
    typing-extensions: 4.5.0
    tzdata: 2023.3
    urllib3: 1.26.15
    wcwidth: 0.2.6
    webcolors: 1.12
    wheel: 0.38.4
    wheel-filename: 1.4.1
    widgetsnbextension: 4.0.7
    zipp: 3.15.0