Opened 7 years ago

Closed 7 years ago

#1338 closed defect (duplicate)

draw() takes 3 positional arguments but 4 were given

Reported by: chimerax-bug-report@… Owned by: Tom Goddard
Priority: normal Milestone:
Component: Graphics Version:
Keywords: Cc:
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description 

The following bug report has been submitted:
Platform:        Darwin-17.7.0-x86_64-i386-64bit
ChimeraX Version: 0.8 (2018-09-26)
Description
(Describe the actions that caused this problem to occur here)

Log:
UCSF ChimeraX version: 0.8 (2018-09-26)  
How to cite UCSF ChimeraX  

open /Users/ghatz/Desktop/xtal/MB3/20180611/Refine_13/MB3-180611_refine_13.pdb
↵

Summary of feedback from opening
/Users/ghatz/Desktop/xtal/MB3/20180611/Refine_13/MB3-180611_refine_13.pdb  
---  
warnings | Ignored bad PDB record found on line 1  
REMARK Date 2018-06-22 Time 21:14:44 CEST +0200 (1529694884.76 s)  
  
Ignored bad PDB record found on line 2  
REMARK PHENIX refinement  
  
Ignored bad PDB record found on line 4  
REMARK ****************** INPUT FILES AND LABELS
******************************  
  
Ignored bad PDB record found on line 5  
REMARK Reflections:  
  
Ignored bad PDB record found on line 6  
REMARK file name :
/Users/ghatz/Desktop/xtal/MB3/20180611/puck62-5_1_ccp4_5C121.mtz  
  
48 messages similar to the above omitted  
  
Chain information for MB3-180611_refine_13.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
C | No description available  
D E | No description available  
F | No description available  
  

select #1 ↵

6978 atoms, 7122 bonds selected  

~select #1 ↵

select subtract #1 ↵

Nothing selected  

select #1 ↵

6978 atoms, 7122 bonds selected  

~select #1 ↵

select subtract #1 ↵

Nothing selected  

view clip false ↵

view clip false ↵

view clip false ↵

open /Users/ghatz/Desktop/Density-AC-linker.py ↵

Traceback (most recent call last):  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/gui.py", line 514, in _qt_safe  
    run(session, "open " \+ quote_if_necessary(paths[0]))  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/commands/run.py", line 31, in run  
    results = command.run(text, log=log)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/commands/cli.py", line 2561, in run  
    result = ci.function(session, **kw_args)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/commands/open.py", line 41, in open  
    from_database=from_database, ignore_cache=ignore_cache, **kw))  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/commands/open.py", line 110, in open  
    models = handle_unknown_kw(session.models.open, paths, format=format,
name=name, **kw)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/commands/open.py", line 62, in handle_unknown_kw  
    return f(*args, **kw)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/models.py", line 578, in open  
    session, filenames, format=format, name=name, **kw)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/io.py", line 444, in open_multiple_data  
    models, status = open_data(session, fspec, format=format, name=name, **kw)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/io.py", line 402, in open_data  
    models, status = open_func(*args, **kw)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/scripting.py", line 75, in open_python_script  
    exec(code, sandbox.__dict__)  
  File "Density-AC-linker.py", line 1, in <module>  
    import cPickle, base64  
ModuleNotFoundError: No module named 'cPickle'  
  

ModuleNotFoundError: No module named 'cPickle'  
  
File "Density-AC-linker.py", line 1, in  
import cPickle, base64  
  
See log for complete Python traceback.  
  

close session ↵

open /Users/ghatz/Desktop/emd_7776.map ↵

Opened emd_7776.map, grid size 150,150,150, pixel 8.18, shown at level 0.237,
step 1, values float32  

color selAtoms bychain ↵

color selAtoms bychain ↵

color selAtoms byhetero ↵

lighting flat ↵

lighting flat ↵

lighting flat ↵

set silhouettes false ↵

set silhouettes true ↵

lighting flat ↵

lighting flat ↵

lighting soft ↵

set silhouettes false ↵

open "/Users/ghatz/Dropbox/MyDocs/PROJECTS/MT+Cep135/From
Sergey/Correct_pixel/Hlx1_postproc_WideHsCEP135.mrc" ↵

Opened Hlx1_postproc_WideHsCEP135.mrc, grid size 320,320,320, pixel 1.89,
shown at level 0.0549, step 2, values float32  

select #2 ↵

2 models selected  
Traceback (most recent call last):  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 386, in <lambda>  
    gw.mouseMoveEvent = lambda e, s=self: s._dispatch_mouse_event(e,
"mouse_drag")  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 326, in _dispatch_mouse_event  
    f(MouseEvent(event))  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 454, in mouse_drag  
    self._draw_drag_rectangle(event)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 532, in _draw_drag_rectangle  
    v.draw_xor_rectangle(dx, h-dy, x, h-y, self.drag_color)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/view.py", line 279, in draw_xor_rectangle  
    self._rectangle_drawing = draw_xor_rectangle(self._render, x1, y1, x2, y2,
color, d)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/drawing.py", line 1451, in draw_xor_rectangle  
    d.draw(r, p0, d.OPAQUE_DRAW_PASS)  
TypeError: draw() takes 3 positional arguments but 4 were given  
  

TypeError: draw() takes 3 positional arguments but 4 were given  
  
File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/drawing.py", line 1451, in draw_xor_rectangle  
d.draw(r, p0, d.OPAQUE_DRAW_PASS)  
  
See log for complete Python traceback.  
  

Traceback (most recent call last):  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 386, in <lambda>  
    gw.mouseMoveEvent = lambda e, s=self: s._dispatch_mouse_event(e,
"mouse_drag")  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 326, in _dispatch_mouse_event  
    f(MouseEvent(event))  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 454, in mouse_drag  
    self._draw_drag_rectangle(event)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 532, in _draw_drag_rectangle  
    v.draw_xor_rectangle(dx, h-dy, x, h-y, self.drag_color)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/view.py", line 279, in draw_xor_rectangle  
    self._rectangle_drawing = draw_xor_rectangle(self._render, x1, y1, x2, y2,
color, d)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/drawing.py", line 1451, in draw_xor_rectangle  
    d.draw(r, p0, d.OPAQUE_DRAW_PASS)  
TypeError: draw() takes 3 positional arguments but 4 were given  
  

TypeError: draw() takes 3 positional arguments but 4 were given  
  
File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/drawing.py", line 1451, in draw_xor_rectangle  
d.draw(r, p0, d.OPAQUE_DRAW_PASS)  
  
See log for complete Python traceback.  
  

Traceback (most recent call last):  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 386, in <lambda>  
    gw.mouseMoveEvent = lambda e, s=self: s._dispatch_mouse_event(e,
"mouse_drag")  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 326, in _dispatch_mouse_event  
    f(MouseEvent(event))  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 454, in mouse_drag  
    self._draw_drag_rectangle(event)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 532, in _draw_drag_rectangle  
    v.draw_xor_rectangle(dx, h-dy, x, h-y, self.drag_color)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/view.py", line 279, in draw_xor_rectangle  
    self._rectangle_drawing = draw_xor_rectangle(self._render, x1, y1, x2, y2,
color, d)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/drawing.py", line 1451, in draw_xor_rectangle  
    d.draw(r, p0, d.OPAQUE_DRAW_PASS)  
TypeError: draw() takes 3 positional arguments but 4 were given  
  

TypeError: draw() takes 3 positional arguments but 4 were given  
  
File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/drawing.py", line 1451, in draw_xor_rectangle  
d.draw(r, p0, d.OPAQUE_DRAW_PASS)  
  
See log for complete Python traceback.  
  

Traceback (most recent call last):  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 386, in <lambda>  
    gw.mouseMoveEvent = lambda e, s=self: s._dispatch_mouse_event(e,
"mouse_drag")  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 326, in _dispatch_mouse_event  
    f(MouseEvent(event))  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 454, in mouse_drag  
    self._draw_drag_rectangle(event)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 532, in _draw_drag_rectangle  
    v.draw_xor_rectangle(dx, h-dy, x, h-y, self.drag_color)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/view.py", line 279, in draw_xor_rectangle  
    self._rectangle_drawing = draw_xor_rectangle(self._render, x1, y1, x2, y2,
color, d)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/drawing.py", line 1451, in draw_xor_rectangle  
    d.draw(r, p0, d.OPAQUE_DRAW_PASS)  
TypeError: draw() takes 3 positional arguments but 4 were given  
  

TypeError: draw() takes 3 positional arguments but 4 were given  
  
File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/drawing.py", line 1451, in draw_xor_rectangle  
d.draw(r, p0, d.OPAQUE_DRAW_PASS)  
  
See log for complete Python traceback.  
  

Traceback (most recent call last):  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 386, in <lambda>  
    gw.mouseMoveEvent = lambda e, s=self: s._dispatch_mouse_event(e,
"mouse_drag")  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 326, in _dispatch_mouse_event  
    f(MouseEvent(event))  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 454, in mouse_drag  
    self._draw_drag_rectangle(event)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 532, in _draw_drag_rectangle  
    v.draw_xor_rectangle(dx, h-dy, x, h-y, self.drag_color)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/view.py", line 279, in draw_xor_rectangle  
    self._rectangle_drawing = draw_xor_rectangle(self._render, x1, y1, x2, y2,
color, d)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/drawing.py", line 1451, in draw_xor_rectangle  
    d.draw(r, p0, d.OPAQUE_DRAW_PASS)  
TypeError: draw() takes 3 positional arguments but 4 were given  
  

TypeError: draw() takes 3 positional arguments but 4 were given  
  
File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/drawing.py", line 1451, in draw_xor_rectangle  
d.draw(r, p0, d.OPAQUE_DRAW_PASS)  
  
See log for complete Python traceback.  
  

Traceback (most recent call last):  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 386, in <lambda>  
    gw.mouseMoveEvent = lambda e, s=self: s._dispatch_mouse_event(e,
"mouse_drag")  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 326, in _dispatch_mouse_event  
    f(MouseEvent(event))  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 454, in mouse_drag  
    self._draw_drag_rectangle(event)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 532, in _draw_drag_rectangle  
    v.draw_xor_rectangle(dx, h-dy, x, h-y, self.drag_color)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/view.py", line 279, in draw_xor_rectangle  
    self._rectangle_drawing = draw_xor_rectangle(self._render, x1, y1, x2, y2,
color, d)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/drawing.py", line 1451, in draw_xor_rectangle  
    d.draw(r, p0, d.OPAQUE_DRAW_PASS)  
TypeError: draw() takes 3 positional arguments but 4 were given  
  

TypeError: draw() takes 3 positional arguments but 4 were given  
  
File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/drawing.py", line 1451, in draw_xor_rectangle  
d.draw(r, p0, d.OPAQUE_DRAW_PASS)  
  
See log for complete Python traceback.  
  

Traceback (most recent call last):  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 386, in <lambda>  
    gw.mouseMoveEvent = lambda e, s=self: s._dispatch_mouse_event(e,
"mouse_drag")  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 326, in _dispatch_mouse_event  
    f(MouseEvent(event))  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 454, in mouse_drag  
    self._draw_drag_rectangle(event)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 532, in _draw_drag_rectangle  
    v.draw_xor_rectangle(dx, h-dy, x, h-y, self.drag_color)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/view.py", line 279, in draw_xor_rectangle  
    self._rectangle_drawing = draw_xor_rectangle(self._render, x1, y1, x2, y2,
color, d)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/drawing.py", line 1451, in draw_xor_rectangle  
    d.draw(r, p0, d.OPAQUE_DRAW_PASS)  
TypeError: draw() takes 3 positional arguments but 4 were given  
  

TypeError: draw() takes 3 positional arguments but 4 were given  
  
File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/drawing.py", line 1451, in draw_xor_rectangle  
d.draw(r, p0, d.OPAQUE_DRAW_PASS)  
  
See log for complete Python traceback.  
  

Traceback (most recent call last):  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 386, in <lambda>  
    gw.mouseMoveEvent = lambda e, s=self: s._dispatch_mouse_event(e,
"mouse_drag")  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 326, in _dispatch_mouse_event  
    f(MouseEvent(event))  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 454, in mouse_drag  
    self._draw_drag_rectangle(event)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 532, in _draw_drag_rectangle  
    v.draw_xor_rectangle(dx, h-dy, x, h-y, self.drag_color)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/view.py", line 279, in draw_xor_rectangle  
    self._rectangle_drawing = draw_xor_rectangle(self._render, x1, y1, x2, y2,
color, d)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/drawing.py", line 1451, in draw_xor_rectangle  
    d.draw(r, p0, d.OPAQUE_DRAW_PASS)  
TypeError: draw() takes 3 positional arguments but 4 were given  
  

TypeError: draw() takes 3 positional arguments but 4 were given  
  
File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/drawing.py", line 1451, in draw_xor_rectangle  
d.draw(r, p0, d.OPAQUE_DRAW_PASS)  
  
See log for complete Python traceback.  
  

Traceback (most recent call last):  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 386, in <lambda>  
    gw.mouseMoveEvent = lambda e, s=self: s._dispatch_mouse_event(e,
"mouse_drag")  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 326, in _dispatch_mouse_event  
    f(MouseEvent(event))  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 454, in mouse_drag  
    self._draw_drag_rectangle(event)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 532, in _draw_drag_rectangle  
    v.draw_xor_rectangle(dx, h-dy, x, h-y, self.drag_color)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/view.py", line 279, in draw_xor_rectangle  
    self._rectangle_drawing = draw_xor_rectangle(self._render, x1, y1, x2, y2,
color, d)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/drawing.py", line 1451, in draw_xor_rectangle  
    d.draw(r, p0, d.OPAQUE_DRAW_PASS)  
TypeError: draw() takes 3 positional arguments but 4 were given  
  

TypeError: draw() takes 3 positional arguments but 4 were given  
  
File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/drawing.py", line 1451, in draw_xor_rectangle  
d.draw(r, p0, d.OPAQUE_DRAW_PASS)  
  
See log for complete Python traceback.  
  

Traceback (most recent call last):  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 386, in <lambda>  
    gw.mouseMoveEvent = lambda e, s=self: s._dispatch_mouse_event(e,
"mouse_drag")  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 326, in _dispatch_mouse_event  
    f(MouseEvent(event))  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 454, in mouse_drag  
    self._draw_drag_rectangle(event)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 532, in _draw_drag_rectangle  
    v.draw_xor_rectangle(dx, h-dy, x, h-y, self.drag_color)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/view.py", line 279, in draw_xor_rectangle  
    self._rectangle_drawing = draw_xor_rectangle(self._render, x1, y1, x2, y2,
color, d)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/drawing.py", line 1451, in draw_xor_rectangle  
    d.draw(r, p0, d.OPAQUE_DRAW_PASS)  
TypeError: draw() takes 3 positional arguments but 4 were given  
  

TypeError: draw() takes 3 positional arguments but 4 were given  
  
File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/drawing.py", line 1451, in draw_xor_rectangle  
d.draw(r, p0, d.OPAQUE_DRAW_PASS)  
  
See log for complete Python traceback.  
  

Traceback (most recent call last):  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 386, in <lambda>  
    gw.mouseMoveEvent = lambda e, s=self: s._dispatch_mouse_event(e,
"mouse_drag")  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 326, in _dispatch_mouse_event  
    f(MouseEvent(event))  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 454, in mouse_drag  
    self._draw_drag_rectangle(event)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 532, in _draw_drag_rectangle  
    v.draw_xor_rectangle(dx, h-dy, x, h-y, self.drag_color)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/view.py", line 279, in draw_xor_rectangle  
    self._rectangle_drawing = draw_xor_rectangle(self._render, x1, y1, x2, y2,
color, d)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/drawing.py", line 1451, in draw_xor_rectangle  
    d.draw(r, p0, d.OPAQUE_DRAW_PASS)  
TypeError: draw() takes 3 positional arguments but 4 were given  
  

TypeError: draw() takes 3 positional arguments but 4 were given  
  
File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/drawing.py", line 1451, in draw_xor_rectangle  
d.draw(r, p0, d.OPAQUE_DRAW_PASS)  
  
See log for complete Python traceback.  
  

Traceback (most recent call last):  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 386, in <lambda>  
    gw.mouseMoveEvent = lambda e, s=self: s._dispatch_mouse_event(e,
"mouse_drag")  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 326, in _dispatch_mouse_event  
    f(MouseEvent(event))  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 454, in mouse_drag  
    self._draw_drag_rectangle(event)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 532, in _draw_drag_rectangle  
    v.draw_xor_rectangle(dx, h-dy, x, h-y, self.drag_color)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/view.py", line 279, in draw_xor_rectangle  
    self._rectangle_drawing = draw_xor_rectangle(self._render, x1, y1, x2, y2,
color, d)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/drawing.py", line 1451, in draw_xor_rectangle  
    d.draw(r, p0, d.OPAQUE_DRAW_PASS)  
TypeError: draw() takes 3 positional arguments but 4 were given  
  

TypeError: draw() takes 3 positional arguments but 4 were given  
  
File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/drawing.py", line 1451, in draw_xor_rectangle  
d.draw(r, p0, d.OPAQUE_DRAW_PASS)  
  
See log for complete Python traceback.  
  

Traceback (most recent call last):  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 386, in <lambda>  
    gw.mouseMoveEvent = lambda e, s=self: s._dispatch_mouse_event(e,
"mouse_drag")  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 326, in _dispatch_mouse_event  
    f(MouseEvent(event))  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 454, in mouse_drag  
    self._draw_drag_rectangle(event)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/mousemodes.py", line 532, in _draw_drag_rectangle  
    v.draw_xor_rectangle(dx, h-dy, x, h-y, self.drag_color)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/view.py", line 279, in draw_xor_rectangle  
    self._rectangle_drawing = draw_xor_rectangle(self._render, x1, y1, x2, y2,
color, d)  
  File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/drawing.py", line 1451, in draw_xor_rectangle  
    d.draw(r, p0, d.OPAQUE_DRAW_PASS)  
TypeError: draw() takes 3 positional arguments but 4 were given  
  

TypeError: draw() takes 3 positional arguments but 4 were given  
  
File
"/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/graphics/drawing.py", line 1451, in draw_xor_rectangle  
d.draw(r, p0, d.OPAQUE_DRAW_PASS)  
  
See log for complete Python traceback.  
  




OpenGL version: 4.1 NVIDIA-10.33.0 387.10.10.10.40.105
OpenGL renderer: NVIDIA GeForce GT 750M OpenGL Engine
OpenGL vendor: NVIDIA Corporation

Change History (2)

comment:1 by pett, 7 years ago

Component: Unassigned → Graphics
Owner: set to Tom Goddard
Platform: → all
Project: → ChimeraX
Status: new → assigned
Summary: ChimeraX bug report submission → draw() takes 3 positional arguments but 4 were given

comment:2 by Tom Goddard, 7 years ago

Resolution: → duplicate
Status: assigned → closed

Duplicate. Fixed last week.

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