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Version 3 (modified by goddard, 17 years ago) ( diff )
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Chimera Python Scripts

These Python scripts provide capabilities not available using Chimera dialogs and commands. They may only work with specific Chimera versions.

Anisotropic b-factors shown as ellipsoids. aniso.py . Tested with Chimera 1.3 using PDB 1xy1.

Attachments (99)

quality.py (88 bytes ) - added by goddard 17 years ago.
match.py (540 bytes ) - added by pett 17 years ago.
place.py (2.9 KB ) - added by goddard 17 years ago.
aniso.py (904 bytes ) - added by pett 17 years ago.
interpolate.py (575 bytes ) - added by goddard 17 years ago.
markhidden.py (2.0 KB ) - added by goddard 17 years ago.
surfvert.py (1.2 KB ) - added by goddard 17 years ago.
pqr2chimera.py (577 bytes ) - added by pett 17 years ago.
xyzmap.py (2.5 KB ) - added by goddard 17 years ago.
xyzsdmap.py (2.4 KB ) - added by goddard 17 years ago.
lightsout.py (225 bytes ) - added by goddard 17 years ago.
esp.py (301 bytes ) - added by pett 17 years ago.
surfsilhouette.py (2.1 KB ) - added by goddard 17 years ago.
selLys.py (792 bytes ) - added by pett 17 years ago.
disulphide.py (912 bytes ) - added by pett 17 years ago.
markeruse.py (589 bytes ) - added by goddard 16 years ago.
closeatoms.py (936 bytes ) - added by goddard 16 years ago.
surfvol.py (1.1 KB ) - added by goddard 16 years ago.
angle.py (860 bytes ) - added by goddard 16 years ago.
capcolor.py (377 bytes ) - added by goddard 16 years ago.
square.py (471 bytes ) - added by goddard 16 years ago.
placeatom.py (1.6 KB ) - added by goddard 16 years ago.
saveunitcell.py (567 bytes ) - added by goddard 16 years ago.
torspace.py (2.3 KB ) - added by pett 16 years ago.
edgesum.py (966 bytes ) - added by goddard 16 years ago.
capmask.py (5.7 KB ) - added by goddard 16 years ago.
camerapositions.py (838 bytes ) - added by goddard 16 years ago.
flatimage.py (2.8 KB ) - added by goddard 16 years ago.
makesurf.py (584 bytes ) - added by goddard 15 years ago.
placem.py (3.0 KB ) - added by goddard 15 years ago.
surfvalues.py (2.5 KB ) - added by goddard 15 years ago.
readvol.2.py (912 bytes ) - added by goddard 15 years ago.
readvol.py (912 bytes ) - added by goddard 15 years ago.
czone.py (493 bytes ) - added by goddard 15 years ago.
smoothMD.py (1.6 KB ) - added by pett 15 years ago.
marksurface.py (563 bytes ) - added by goddard 15 years ago.
volumecenter.py (1.3 KB ) - added by goddard 14 years ago.
orient.py (1.2 KB ) - added by pett 14 years ago.
vclip.py (911 bytes ) - added by goddard 14 years ago.
eulermove.py (730 bytes ) - added by goddard 14 years ago.
tilemap.py (895 bytes ) - added by goddard 14 years ago.
rotatoms.py (1.1 KB ) - added by goddard 14 years ago.
fov.py (1.3 KB ) - added by goddard 13 years ago.
savemaskedmaps.py (451 bytes ) - added by goddard 13 years ago.
distances.py (468 bytes ) - added by goddard 13 years ago.
compress.py (2.0 KB ) - added by goddard 13 years ago.
mapsum.py (2.4 KB ) - added by goddard 13 years ago.
RadialDensity.zip (70.4 KB ) - added by goddard 13 years ago.
fitsearch.py (782 bytes ) - added by goddard 13 years ago.
microtubule.py (3.2 KB ) - added by goddard 13 years ago.
colordist.py (3.4 KB ) - added by goddard 13 years ago.
red_area.py (1.3 KB ) - added by goddard 12 years ago.
filament.py (2.6 KB ) - added by goddard 12 years ago.
curvature.py (2.1 KB ) - added by goddard 12 years ago.
changeaxes.py (1.2 KB ) - added by goddard 12 years ago.
insightgrid.py (1.7 KB ) - added by goddard 12 years ago.
varbond.py (779 bytes ) - added by pett 12 years ago.
blend.py (2.3 KB ) - added by goddard 12 years ago.
atomdist.py (535 bytes ) - added by goddard 11 years ago.
showoutline.py (237 bytes ) - added by goddard 11 years ago.
midfocal.py (376 bytes ) - added by goddard 11 years ago.
flat.py (691 bytes ) - added by goddard 11 years ago.
placeimod.py (1.5 KB ) - added by goddard 11 years ago.
printfit.py (441 bytes ) - added by goddard 11 years ago.
helixtube.py (1.6 KB ) - added by goddard 11 years ago.
pp.py (1.7 KB ) - added by goddard 11 years ago.
dipole.py (1.1 KB ) - added by pett 10 years ago. calculate dipole moment and show dipole vector
cube.py (921 bytes ) - added by goddard 10 years ago.
surfinvert.py (473 bytes ) - added by goddard 10 years ago.
findIncomplete.py (565 bytes ) - added by meng 10 years ago.
capcalc.py (867 bytes ) - added by goddard 10 years ago.
maxdist.py (443 bytes ) - added by goddard 10 years ago.
edgeband.py (1.2 KB ) - added by goddard 10 years ago.
lineplot.py (2.8 KB ) - added by goddard 10 years ago.
surfval.py (1.1 KB ) - added by goddard 10 years ago.
syncregion.py (401 bytes ) - added by goddard 10 years ago.
getcolors.py (170 bytes ) - added by pett 10 years ago. print modelcolor command equivalents
triangles.py (763 bytes ) - added by goddard 10 years ago.
angles.py (1.8 KB ) - added by goddard 10 years ago.
fitnogui.py (2.5 KB ) - added by goddard 10 years ago.
avalnogui.py (1.2 KB ) - added by goddard 9 years ago.
savemarkers.py (1013 bytes ) - added by goddard 9 years ago.
volmin.py (445 bytes ) - added by goddard 9 years ago.
copymol.py (657 bytes ) - added by goddard 9 years ago.
radius-of-gyration-nomass.py (401 bytes ) - added by pett 9 years ago.
radius-of-gyration-mass.py (421 bytes ) - added by pett 9 years ago.
save.py (683 bytes ) - added by goddard 9 years ago.
dividelinks.py (748 bytes ) - added by goddard 9 years ago.
worm.py (335 bytes ) - added by pett 9 years ago.
segment.py (287 bytes ) - added by goddard 9 years ago.
removecross.py (1.7 KB ) - added by goddard 9 years ago.
pblengths.py (237 bytes ) - added by goddard 9 years ago.
mean_distance.py (1.1 KB ) - added by goddard 8 years ago.
mapdiff.py (408 bytes ) - added by goddard 8 years ago.
pruneCoordSets.py (176 bytes ) - added by pett 7 years ago.
vdock_accel.py (2.1 KB ) - added by goddard 6 years ago.
ylm.py (2.3 KB ) - added by goddard 6 years ago.
flip.py (538 bytes ) - added by goddard 6 years ago.
smooth_md.py (1.2 KB ) - added by pett 2 years ago.

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