Phenix

Local EM Fitting

• Support pre-fitted models

Fit Ligand

• Mandatory resolution command arg / tool widget
• Tool's chain ID / res num widgets pass values to command
• Made command fully functional, including checking availability of chain ID + res num
• Interactive search-center adjustment

ChimeraX completed

• Support HTML in table cells
• Sequence viewer expand selection to columns
• If chains have been created, use that info in determining residue principal atom
• Log a message when computing secondary structure
• "center" option for open command
• Small revamp of altlocs tool in preparation for "show all altlocs" capability
• Render by Attribute
  • Remember histogram markers on a per-attribute basis
  • Keep markers at same value position (rather than relative position) when expanding histogram range
• Fixed bug making chains where internal residue is non-polymeric
• Select by column identity
• ​KVFinder tool/command
• Also worked on: AmberTools, atom-spec parser, profile grids, match→align