Changes between Version 1 and Version 2 of 2025-2-27

Timestamp:

Feb 27, 2025, 3:19:46 PM (8 months ago)

Author:

Tom Goddard

Comment:

--

2025-2-27

@@ -7 +7 @@
 = Agenda =
 
-* Eric - work in progress
+* Eric - work in progress, TODO: add link to slides.
 * Scooter news
 * NIAID supplement to R01 grant
@@ -14 +14 @@
 = Discussion Notes =
 
+* Wynton beegfs problems
+ - Greg reports Wynton cluster has been very slow the past few days due to beegfs problems.
+ - This has not effected plato cluster since most plato home directories are no longer on beegfs.
+
+* Eric Phenix R24 progress
+ - Improved local EM fitting results panel
+ - Ligand fit, waiting for Phenix developers to add json output for results.
+
+* Eric ChimeraX progress
+ - Aded LAMMPS trajectory reader from Mitch Murphy
+ - Profile grids saved in sessions.
+ - Optimized reading large (10000 seq) sequence alignments.
+ - Structure alignment can be done using sequence alignment now.
+
+* Phenix R24 annual report
+  - Report is due 60 days before July 1 grant start of year.
+  - Will need to docusign report.
+  - Some unspent funds on R24 could be used to fund work by Zach or Tom on Phenix projects.
+  - Possible next Phenix tools: restraints and validation may be long projects.
+  - Creating video tutorials for existing phenix tools would be useful outreach.
+  - Posting on bluesky phenix tool highlights that point to web page examples could be made.
+  - Next Phenix R24 developer meeting is Thursday March 13, 10 AM.
+
+* Windows Subsystem for Linux
+  - WSLg allows GUI apps to run on Linux under Windows.
+  - User email suggests ChimeraX Qt does not work with it, Wayland support issue.
+
 = Action Items =