Attendees

• Zach, Eric, Elaine, TomG, Scooter

On-site Genentech Hall N436A

Agenda

• TomG - NIAID progress report
• ChimeraX 1.5 roadmap discussion, Mac M1 port
• Review Action Items listed below

Discussion Notes

• NIAID contract progress
  • Slides from TomG

• NIH3D pipeline
  • Eric working with Michal to get 3DPresets bundle installed despite Toolshed problems
  • Eric has added chain rename command and tool

• DICOM
  • Zach got email from Jason Rubenstein a week ago.
  • He got an error opening some chest scan.
  • Zach has told him he is working on it.

• AlphaFold / ColabFold
  • Added handling of missing residues with PAE plot for Phil Cruz
  • Working on making ChimeraX AlphaFold predictions use ColabFold, 5-times faster
  • Scooter suggests should write an App Note paper on ChimeraX AlphaFold capabilities

• Mac M1 port
  • Got techpreview builds and notarization working, but only with GPL PyQt6
  • Phil Thompson of Riverbank computing working of fixing commercial PyQt6 wheels on Mac ARM
  • Made universal build an notarized, 40% bigger than Intel Mac distribution.
  • LZMA compression of dmg can reduce size by 30% on macOS 10.15 and newer.

• CZI annual report
  • annual report due (Aug 1?)
  • Zach and Scooter will write it.
  • Eric can provide session converter progress text

Action Items

• Clean up VirtualHosts on our web servers -- Greg/Scooter
• Document new vpn setup on Linux -- Scooter
• Audit followup -- Scooter