![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 2 years ago
Closed 2 years ago
#9972 closed defect (nonchimerax)
Graphics crash, macOS 14.0, Intel Iris Plus Graphics
| Reported by: | Owned by: | Tom Goddard | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Graphics | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: macOS-10.16-x86_64-i386-64bit
ChimeraX Version: 1.6.1 (2023-05-09 17:57:07 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Fatal Python error: Aborted
Current thread 0x00007ff85a6afe80 (most recent call first):
File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/graphics/opengl.py", line 235 in swap_buffers
File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/graphics/opengl.py", line 497 in swap_buffers
File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/graphics/view.py", line 191 in draw
File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 73 in draw_new_frame
File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139 in _redraw_timer_callback
File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/ui/gui.py", line 275 in event_loop
File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/__main__.py", line 892 in init
File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/__main__.py", line 1043 in
File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 87 in _run_code
File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 197 in _run_module_as_main
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{
"uptime" : 53000,
"procRole" : "Foreground",
"version" : 2,
"userID" : 501,
"deployVersion" : 210,
"modelCode" : "MacBookPro16,2",
"coalitionID" : 483,
"osVersion" : {
"train" : "macOS 14.0",
"build" : "23A344",
"releaseType" : "User"
},
"captureTime" : "2023-10-12 12:05:25.8059 -0400",
"codeSigningMonitor" : 0,
"incident" : "AD886000-2827-4534-8EFB-9F37CCAE452D",
"pid" : 58663,
"cpuType" : "X86-64",
"roots_installed" : 0,
"bug_type" : "309",
"procLaunch" : "2023-10-12 10:31:01.0003 -0400",
"procStartAbsTime" : 47755029367391,
"procExitAbsTime" : 53420140710631,
"procName" : "ChimeraX",
"procPath" : "\/Applications\/ChimeraX-1.6.1.app\/Contents\/MacOS\/ChimeraX",
"bundleInfo" : {"CFBundleShortVersionString":"1.6.1","CFBundleVersion":"1.6.1.0","CFBundleIdentifier":"edu.ucsf.cgl.ChimeraX"},
"storeInfo" : {"deviceIdentifierForVendor":"7E9E0758-4285-5816-A1F0-9E5A6876999A","thirdParty":true},
"parentProc" : "launchd",
"parentPid" : 1,
"coalitionName" : "edu.ucsf.cgl.ChimeraX",
"crashReporterKey" : "A1D4F363-6D00-BDAF-80F4-3DDF79D90485",
"codeSigningID" : "edu.ucsf.cgl.ChimeraX",
"codeSigningTeamID" : "LWV8X224YF",
"codeSigningFlags" : 570491649,
"codeSigningValidationCategory" : 6,
"codeSigningTrustLevel" : 4294967295,
"wakeTime" : 9747,
"bridgeVersion" : {"build":"21P365","train":"8.0"},
"sleepWakeUUID" : "3CEC2878-11D9-4019-AEA5-45C4F997DCFE",
"sip" : "enabled",
"exception" : {"codes":"0x0000000000000000, 0x0000000000000000","rawCodes":[0,0],"type":"EXC_CRASH","signal":"SIGABRT"},
"termination" : {"flags":0,"code":6,"namespace":"SIGNAL","indicator":"Abort trap: 6","byProc":"ChimeraX","byPid":58663},
"asi" : {"libsystem_c.dylib":["abort() called"]},
"asiSignatures" : ["Graphics hardware encountered an error and was reset: 0x00000002\n"],
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"faultingThread" : 0,
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"base" : 4497399808,
"size" : 8192,
"uuid" : "eba0bbb2-1ee4-33c8-b2c3-e0ca34b5efb2",
"path" : "\/Applications\/ChimeraX-1.6.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.9\/lib\/python3.9\/lib-dynload\/grp.cpython-39-darwin.so",
"name" : "grp.cpython-39-darwin.so"
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{
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"arch" : "x86_64",
"base" : 4497956864,
"size" : 204800,
"uuid" : "d7e1b7aa-2530-3908-b749-1ddf8aad37bb",
"path" : "\/Applications\/ChimeraX-1.6.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.9\/lib\/python3.9\/lib-dynload\/_lzma.cpython-39-darwin.so",
"name" : "_lzma.cpython-39-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4497350656,
"size" : 12288,
"uuid" : "acea136f-27d9-3006-b785-f415ed7c491c",
"path" : "\/Applications\/ChimeraX-1.6.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.9\/lib\/python3.9\/lib-dynload\/_bz2.cpython-39-darwin.so",
"name" : "_bz2.cpython-39-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4497076224,
"size" : 24576,
"uuid" : "b9299f10-06ed-376d-94f7-5f40a9a019ce",
"path" : "\/Applications\/ChimeraX-1.6.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.9\/lib\/python3.9\/lib-dynload\/zlib.cpython-39-darwin.so",
"name" : "zlib.cpython-39-darwin.so"
},
{
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"arch" : "x86_64",
"base" : 4497018880,
"size" : 20480,
"uuid" : "0d397cb0-ba52-314e-bd56-863340384c78",
"path" : "\/Applications\/ChimeraX-1.6.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.9\/lib\/python3.9\/lib-dynload\/binascii.cpython-39-darwin.so",
"name" : "binascii.cpython-39-darwin.so"
},
{
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"arch" : "x86_64",
"base" : 4497158144,
"size" : 12288,
"uuid" : "26e2211d-6e3c-34a0-9ef2-e395ec9e55ec",
"path" : "\/Applications\/ChimeraX-1.6.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.9\/lib\/python3.9\/lib-dynload\/_heapq.cpython-39-darwin.so",
"name" : "_heapq.cpython-39-darwin.so"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 4510384128,
"CFBundleShortVersionString" : "3.9.11, (c) 2001-2021 Python Software Foundation.",
"CFBundleIdentifier" : "org.python.python",
"size" : 2527232,
"uuid" : "ef9cc1f4-5991-3213-9a9e-e68c578b6c1b",
"path" : "\/Applications\/ChimeraX-1.6.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.9\/Python",
"name" : "Python",
"CFBundleVersion" : "3.9.11"
},
{
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"arch" : "x86_64",
"base" : 4496826368,
"CFBundleShortVersionString" : "1.6.1",
"CFBundleIdentifier" : "edu.ucsf.cgl.ChimeraX",
"size" : 4096,
"uuid" : "5df621ee-554e-36a8-b448-93b2334e5480",
"path" : "\/Applications\/ChimeraX-1.6.1.app\/Contents\/MacOS\/ChimeraX",
"name" : "ChimeraX",
"CFBundleVersion" : "1.6.1.0"
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"size" : 241656,
"uuid" : "3690c1fc-599f-39ff-bbdb-85422e9a996c",
"path" : "\/usr\/lib\/system\/libsystem_kernel.dylib",
"name" : "libsystem_kernel.dylib"
},
{
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"base" : 140703515348992,
"size" : 49152,
"uuid" : "33c43114-85f0-3f32-86d7-8e6a2403d38c",
"path" : "\/usr\/lib\/system\/libsystem_pthread.dylib",
"name" : "libsystem_pthread.dylib"
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"arch" : "x86_64",
"base" : 140703513927680,
"size" : 557056,
"uuid" : "3e9a5bfa-50c0-3a96-9291-4826c62d1182",
"path" : "\/usr\/lib\/system\/libsystem_c.dylib",
"name" : "libsystem_c.dylib"
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"source" : "P",
"arch" : "x86_64",
"base" : 140703515545600,
"size" : 40960,
"uuid" : "d160c87c-be22-319e-8300-4681dce19c96",
"path" : "\/usr\/lib\/system\/libsystem_platform.dylib",
"name" : "libsystem_platform.dylib"
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{
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"source" : "A",
"base" : 0,
"uuid" : "00000000-0000-0000-0000-000000000000"
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"arch" : "x86_64",
"base" : 140708119105536,
"size" : 45048,
"uuid" : "e2d88893-594a-3625-a899-8eddab88e6a5",
"path" : "\/System\/Library\/PrivateFrameworks\/GPUSupport.framework\/Versions\/A\/Libraries\/libGPUSupportMercury.dylib",
"name" : "libGPUSupportMercury.dylib"
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"arch" : "x86_64h",
"base" : 140712516665344,
"CFBundleShortVersionString" : "22.1.27",
"CFBundleIdentifier" : "com.apple.driver.AppleIntelICLGraphicsGLDriver",
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"name" : "AppleIntelICLGraphicsGLDriver",
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"path" : "\/System\/Library\/Frameworks\/OpenGL.framework\/Versions\/A\/Resources\/GLEngine.bundle\/GLEngine",
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"arch" : "x86_64",
"base" : 140712562786304,
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"CFBundleIdentifier" : "com.apple.opengl",
"size" : 65528,
"uuid" : "91dddab6-0e62-381e-bdf9-29494e2728fb",
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"name" : "OpenGL",
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"CFBundleIdentifier" : "com.apple.AppKit",
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===== Log before crash start =====
UCSF ChimeraX version: 1.6.1 (2023-05-09)
© 2016-2023 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open
> /Users/dingyongbo/Downloads/cryosparc_P263_J2346_003_volume_map_sharp.mrc
Opened cryosparc_P263_J2346_003_volume_map_sharp.mrc as #1, grid size
304,304,304, pixel 1.1, shown at level 0.226, step 2, values float32
> ui mousemode right zoom
> volume #1 level 0.3684
> volume #1 step 1
> volume #1 level 0.5831
> open /Users/dingyongbo/Downloads/cryosparc_P263_J2345_volume_map_sharp.mrc
Opened cryosparc_P263_J2345_volume_map_sharp.mrc as #2, grid size 304,304,304,
pixel 1.1, shown at level 0.232, step 2, values float32
> volume #2 step 1
> volume #2 level 0.6456
> hide #!1 models
> show #!1 models
> hide #!1 models
> hide #!2 models
> show #!1 models
> volume #1 level 0.4873
> volume #1 level 0.4179
> volume #1 level 0.342
> ui tool show "Side View"
> close #2
> view
> ui tool show "Side View"
> volume #1 level 0.2726
> volume #1 level 0.27
> measure center #6
No volume or atoms or surfaces specified
> select add #1
2 models selected
> select subtract #1
Nothing selected
> volume #1 level 0.27
> volume #1 level 0.2667
> volume #1 level 0.2733
> volume #1 level 0.2766
> volume #1 level 0.2799
> volume #1 level 0.2832
> volume #1 level 0.2865
> volume #1 level 0.2898
> volume #1 level 0.2931
> volume #1 level 0.2964
> volume #1 level 0.2997
> volume #1 level 0.303
> volume #1 level 0.3063
> volume #1 level 0.3096
> volume #1 level 0.3129
> volume #1 level 0.3162
> volume #1 level 0.3228
> volume #1 level 0.3295
> volume #1 level 0.3328
> volume #1 level 0.3361
> volume #1 level 0.3394
> volume #1 level 0.3427
> volume #1 level 0.346
> volume #1 level 0.3427
> volume #1 level 0.3394
> volume #1 level 0.3361
> volume #1 level 0.3328
> volume #1 level 0.3295
> volume #1 level 0.3262
> volume #1 level 0.3228
> volume #1 level 0.3195
> vop threshold #1 minimum 0.32 set 0
Opened cryosparc_P263_J2346_003_volume_map_sharp.mrc thresholded as #2, grid
size 304,304,304, pixel 1.1, shown at step 1, values float32
> vop threshold #2 maximum 0.31 setMaximum 1
Opened cryosparc_P263_J2346_003_volume_map_sharp.mrc thresholded as #3, grid
size 304,304,304, pixel 1.1, shown at step 1, values float32
> vop threshold #2 maximum 0.31 setMaximum 1
Opened cryosparc_P263_J2346_003_volume_map_sharp.mrc thresholded as #4, grid
size 304,304,304, pixel 1.1, shown at step 1, values float32
> hide #!4 models
> hide #!3 models
> show #!4 models
> volume #4 level 0.4917
> ui tool show "Map Eraser"
> volume erase #4 center 163.32,110.45,299.25 radius 38.387
> volume erase #4 center 124.31,130.27,298.35 radius 38.387
> volume erase #4 center 150.29,157.76,318.64 radius 38.387
> volume erase #4 center 191.85,169.14,324.57 radius 38.387
> volume erase #4 center 168.44,207.76,327.44 radius 38.387
> volume erase #4 center 127.58,186.3,309.13 radius 38.387
> volume erase #4 center 190.17,113.92,299.74 radius 38.387
> volume erase #4 center 143.2,96.528,262.58 radius 38.387
> volume erase #4 center 128.55,143.79,292.45 radius 38.387
> volume erase #4 center 161.35,156.11,305.87 radius 38.387
> volume erase #4 center 172.24,127.34,296.19 radius 38.387
> volume erase #4 center 191.15,147.87,309.48 radius 38.387
> volume erase #4 center 184.42,175.2,315.93 radius 38.387
> volume erase #4 center 166.28,187.01,315.11 radius 38.387
> volume erase #4 center 154.03,190.04,312.38 radius 38.387
> volume erase #4 center 180.66,208.49,316.24 radius 38.387
> volume erase #4 center 115.42,206.48,298.77 radius 38.387
> volume erase #4 center 179.02,157.71,287.69 radius 18.074
> volume erase #4 center 154.03,134.42,276.72 radius 18.074
> volume erase #4 center 171.21,187.01,292.06 radius 18.074
> volume erase #4 center 178.97,183.33,287.33 radius 12.476
> volume erase #4 center 159.46,208.81,287.64 radius 12.476
> hide #!4 models
> show #!4 models
> save /Users/dingyongbo/Desktop/J2346_whole_binearized.mrc models #4
> ui tool show "Map Eraser"
> show #5 models
> hide #!4 models
> show #!4 models
> show #!3 models
> hide #!3 models
> show #!2 models
> hide #!2 models
> select add #4
2 models selected
> select subtract #4
Nothing selected
> select add #4
2 models selected
> volume erase #4 center 179.54,178.8,214.93 radius 84.629 outside true
> select subtract #4
Nothing selected
> hide #5 models
> open /Users/dingyongbo/Desktop/J2346_whole_binearized.mrc
Opened J2346_whole_binearized.mrc as #6, grid size 304,304,304, pixel 1.1,
shown at level 5e-05, step 2, values float32
> hide #!4 models
> hide #!6 models
> show #!4 models
> show #!6 models
> vop subtract #6 #4
Opened volume difference as #7, grid size 304,304,304, pixel 1.1, shown at
step 1, values float32
> show #!4 models
> save /Users/dingyongbo/Desktop/J2346_Mce_domain_binearized.mrc models #4
> save /Users/dingyongbo/Desktop/J2346_Mce_domain_Rest_binearized.mrc models
> #7
> hide #!7 models
> hide #!4 models
> show #!6 models
> ui tool show "Map Eraser"
> show #5 models
> volume erase #6 center 170.95,158.4,103.03 radius 84.63 outside true
Opened J2346_whole_binearized.mrc copy as #8, grid size 304,304,304, pixel
1.1, shown at step 1, values float32
> hide #5 models
> show #5 models
> hide #5 models
> show #!4 models
> hide #!4 models
> show #!6 models
> show #5 models
> hide #5 models
> hide #!6 models
> show #!6 models
> hide #!6 models
> show #!6 models
> hide #!6 models
> show #!6 models
> vop subtract #6 #8
Opened volume difference as #9, grid size 304,304,304, pixel 1.1, shown at
step 1, values float32
> show #!8 models
> save /Users/dingyongbo/Desktop/J2346_Portal_domain_binearized.mrc models #8
> save /Users/dingyongbo/Desktop/J2346_Portal_domain_Rest_binearized.mrc
> models #9
> open
> /Users/dingyongbo/Downloads/cryosparc_P263_J2347_005_volume_map_sharp.mrc
Opened cryosparc_P263_J2347_005_volume_map_sharp.mrc as #10, grid size
304,304,304, pixel 1.1, shown at level 0.212, step 2, values float32
> hide #!8 models
> hide #!9 models
> volume #10 step 1
> volume #10 level 0.4197
> ui tool show "Side View"
> volume #10 level 0.3609
===== Log before crash end =====
Log:
UCSF ChimeraX version: 1.6.1 (2023-05-09)
© 2016-2023 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open /Users/dingyongbo/Downloads/cryosparc_P263_J2349_mask.mrc
Opened cryosparc_P263_J2349_mask.mrc as #1, grid size 304,304,304, pixel 1.1,
shown at level 1, step 2, values float32
> open
> /Users/dingyongbo/Downloads/cryosparc_P263_J2347_005_volume_map_sharp.mrc
Opened cryosparc_P263_J2347_005_volume_map_sharp.mrc as #2, grid size
304,304,304, pixel 1.1, shown at level 0.212, step 2, values float32
> volume #1 step 1
> volume #1 level 1
> volume #1 color #b2b2b24d
> volume #2 step 1
> volume #2 level 0.3985
> hide #!1 models
> ui tool show "Side View"
> color silver
> volume #2 level 0.4099
OpenGL version: 4.1 INTEL-22.1.27
OpenGL renderer: Intel(R) Iris(TM) Plus Graphics OpenGL Engine
OpenGL vendor: Intel Inc.
Python: 3.9.11
Locale: UTF-8
Qt version: PyQt6 6.4.2, Qt 6.4.2
Qt runtime version: 6.4.3
Qt platform: cocoa
Hardware:
Hardware Overview:
Model Name: MacBook Pro
Model Identifier: MacBookPro16,2
Processor Name: Quad-Core Intel Core i5
Processor Speed: 2 GHz
Number of Processors: 1
Total Number of Cores: 4
L2 Cache (per Core): 512 KB
L3 Cache: 6 MB
Hyper-Threading Technology: Enabled
Memory: 16 GB
System Firmware Version: 2020.0.1.0.0 (iBridge: 21.16.365.0.0,0)
OS Loader Version: 580~439
Software:
System Software Overview:
System Version: macOS 14.0 (23A344)
Kernel Version: Darwin 23.0.0
Time since boot: 15 hours, 27 minutes
Graphics/Displays:
Intel Iris Plus Graphics:
Chipset Model: Intel Iris Plus Graphics
Type: GPU
Bus: Built-In
VRAM (Dynamic, Max): 1536 MB
Vendor: Intel
Device ID: 0x8a53
Revision ID: 0x0007
Metal Support: Metal 3
Displays:
Color LCD:
Display Type: Built-In Retina LCD
Resolution: 2560 x 1600 Retina
Framebuffer Depth: 30-Bit Color (ARGB2101010)
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: Yes
Connection Type: Internal
DELL S2415H:
Resolution: 1920 x 1080 (1080p FHD - Full High Definition)
UI Looks like: 1920 x 1080 @ 60.00Hz
Framebuffer Depth: 30-Bit Color (ARGB2101010)
Display Serial Number: 5J1MP82P0U7L
Mirror: Off
Online: Yes
Rotation: Supported
Connection Type: DVI or HDMI
Adapter Firmware Version: 7.55
Installed Packages:
alabaster: 0.7.13
appdirs: 1.4.4
appnope: 0.1.3
asttokens: 2.2.1
Babel: 2.12.1
backcall: 0.2.0
beautifulsoup4: 4.11.2
blockdiag: 3.0.0
build: 0.10.0
certifi: 2021.10.8
cftime: 1.6.2
charset-normalizer: 3.1.0
ChimeraX-AddCharge: 1.5.9.1
ChimeraX-AddH: 2.2.5
ChimeraX-AlignmentAlgorithms: 2.0.1
ChimeraX-AlignmentHdrs: 3.3.1
ChimeraX-AlignmentMatrices: 2.1
ChimeraX-Alignments: 2.9.3
ChimeraX-AlphaFold: 1.0
ChimeraX-AltlocExplorer: 1.0.3
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.1
ChimeraX-Atomic: 1.43.10
ChimeraX-AtomicLibrary: 10.0.6
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.3.2
ChimeraX-BasicActions: 1.1.2
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.1.2
ChimeraX-BondRot: 2.0.1
ChimeraX-BugReporter: 1.0.1
ChimeraX-BuildStructure: 2.8
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.2.2
ChimeraX-ButtonPanel: 1.0.1
ChimeraX-CageBuilder: 1.0.1
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.3.2
ChimeraX-ChangeChains: 1.0.2
ChimeraX-CheckWaters: 1.3.1
ChimeraX-ChemGroup: 2.0.1
ChimeraX-Clashes: 2.2.4
ChimeraX-ColorActions: 1.0.3
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.3
ChimeraX-CommandLine: 1.2.5
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0.1
ChimeraX-Core: 1.6.1
ChimeraX-CoreFormats: 1.1
ChimeraX-coulombic: 1.4.2
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0.1
ChimeraX-DataFormats: 1.2.3
ChimeraX-Dicom: 1.2
ChimeraX-DistMonitor: 1.4
ChimeraX-DockPrep: 1.1.1
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ESMFold: 1.0
ChimeraX-FileHistory: 1.0.1
ChimeraX-FunctionKey: 1.0.1
ChimeraX-Geometry: 1.3
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1.1
ChimeraX-Hbonds: 2.4
ChimeraX-Help: 1.2.1
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ItemsInspection: 1.0.1
ChimeraX-Label: 1.1.7
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.5
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.2
ChimeraX-Map: 1.1.4
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0.1
ChimeraX-MapFilter: 2.0.1
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1.1
ChimeraX-Markers: 1.0.1
ChimeraX-Mask: 1.0.2
ChimeraX-MatchMaker: 2.0.12
ChimeraX-MDcrds: 2.6
ChimeraX-MedicalToolbar: 1.0.2
ChimeraX-Meeting: 1.0.1
ChimeraX-MLP: 1.1.1
ChimeraX-mmCIF: 2.12
ChimeraX-MMTF: 2.2
ChimeraX-Modeller: 1.5.9
ChimeraX-ModelPanel: 1.3.7
ChimeraX-ModelSeries: 1.0.1
ChimeraX-Mol2: 2.0
ChimeraX-Mole: 1.0
ChimeraX-Morph: 1.0.2
ChimeraX-MouseModes: 1.2
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nifti: 1.0
ChimeraX-NRRD: 1.0
ChimeraX-Nucleotides: 2.0.3
ChimeraX-OpenCommand: 1.10.1
ChimeraX-PDB: 2.7.2
ChimeraX-PDBBio: 1.0
ChimeraX-PDBLibrary: 1.0.2
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0.1
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1
ChimeraX-PubChem: 2.1
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-RenderByAttr: 1.1
ChimeraX-RenumberResidues: 1.1
ChimeraX-ResidueFit: 1.0.1
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 3.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5.1
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0.1
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0.1
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.8.3
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0.1
ChimeraX-Shortcuts: 1.1.1
ChimeraX-ShowSequences: 1.0.1
ChimeraX-SideView: 1.0.1
ChimeraX-Smiles: 2.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.10.3
ChimeraX-STL: 1.0.1
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.1.2
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0.1
ChimeraX-SwapAA: 2.0.1
ChimeraX-SwapRes: 2.2.1
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.1.2
ChimeraX-ToolshedUtils: 1.2.1
ChimeraX-Topography: 1.0
ChimeraX-Tug: 1.0.1
ChimeraX-UI: 1.28.4
ChimeraX-uniprot: 2.2.2
ChimeraX-UnitCell: 1.0.1
ChimeraX-ViewDockX: 1.2
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0.1
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0.2
ChimeraX-WebServices: 1.1.1
ChimeraX-Zone: 1.0.1
colorama: 0.4.6
comm: 0.1.3
contourpy: 1.0.7
cxservices: 1.2.2
cycler: 0.11.0
Cython: 0.29.33
debugpy: 1.6.7
decorator: 5.1.1
docutils: 0.19
executing: 1.2.0
filelock: 3.9.0
fonttools: 4.39.3
funcparserlib: 1.0.1
grako: 3.16.5
h5py: 3.8.0
html2text: 2020.1.16
idna: 3.4
ihm: 0.35
imagecodecs: 2022.2.22
imagesize: 1.4.1
importlib-metadata: 6.6.0
ipykernel: 6.21.1
ipython: 8.10.0
ipython-genutils: 0.2.0
ipywidgets: 8.0.6
jedi: 0.18.2
Jinja2: 3.1.2
jupyter-client: 8.0.2
jupyter-core: 5.3.0
jupyterlab-widgets: 3.0.7
kiwisolver: 1.4.4
line-profiler: 4.0.2
lxml: 4.9.2
lz4: 4.3.2
MarkupSafe: 2.1.2
matplotlib: 3.6.3
matplotlib-inline: 0.1.6
msgpack: 1.0.4
nest-asyncio: 1.5.6
netCDF4: 1.6.2
networkx: 2.8.8
nibabel: 5.0.1
nptyping: 2.5.0
numexpr: 2.8.4
numpy: 1.23.5
openvr: 1.23.701
packaging: 21.3
ParmEd: 3.4.3
parso: 0.8.3
pep517: 0.13.0
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 9.3.0
pip: 23.0
pkginfo: 1.9.6
platformdirs: 3.5.0
prompt-toolkit: 3.0.38
psutil: 5.9.4
ptyprocess: 0.7.0
pure-eval: 0.2.2
pycollada: 0.7.2
pydicom: 2.3.0
Pygments: 2.14.0
pynrrd: 1.0.0
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 3.0.9
pyproject-hooks: 1.0.0
PyQt6-commercial: 6.4.2
PyQt6-Qt6: 6.4.3
PyQt6-sip: 13.4.1
PyQt6-WebEngine-commercial: 6.4.0
PyQt6-WebEngine-Qt6: 6.4.3
python-dateutil: 2.8.2
pytz: 2023.3
pyzmq: 25.0.2
qtconsole: 5.4.0
QtPy: 2.3.1
RandomWords: 0.4.0
requests: 2.28.2
scipy: 1.9.3
setuptools: 67.4.0
setuptools-scm: 7.0.5
sfftk-rw: 0.7.3
six: 1.16.0
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
soupsieve: 2.4.1
sphinx: 6.1.3
sphinx-autodoc-typehints: 1.22
sphinxcontrib-applehelp: 1.0.4
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 2.0.1
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.5
stack-data: 0.6.2
tables: 3.7.0
tcia-utils: 1.2.0
tifffile: 2022.10.10
tinyarray: 1.2.4
tomli: 2.0.1
tornado: 6.3.1
traitlets: 5.9.0
typing-extensions: 4.5.0
tzdata: 2023.3
urllib3: 1.26.15
wcwidth: 0.2.6
webcolors: 1.12
wheel: 0.38.4
wheel-filename: 1.4.1
widgetsnbextension: 4.0.7
zipp: 3.15.0
Change History (2)
comment:1 by , 2 years ago
| Component: | Unassigned → Graphics |
|---|---|
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → assigned |
| Summary: | ChimeraX bug report submission → Graphics hardware encountered an error and was reset |
comment:2 by , 2 years ago
| Resolution: | → nonchimerax |
|---|---|
| Status: | assigned → closed |
| Summary: | Graphics hardware encountered an error and was reset → Graphics crash, macOS 14.0, Intel Iris Plus Graphics |
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Apple Intel graphics driver crash.