![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 2 years ago
Closed 2 years ago
#9802 closed defect (duplicate)
Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device returned engine == 0
| Reported by: | Owned by: | pett | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Window Toolkit | Version: | |
| Keywords: | Cc: | Tom Goddard | |
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description (last modified by )
The following bug report has been submitted:
Platform: macOS-13.5.2-arm64-arm-64bit
ChimeraX Version: 1.6.1 (2023-05-09 17:57:07 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Fatal Python error: Segmentation fault
Current thread 0x00000001e4a5a080 (most recent call first):
File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/ui/gui.py", line 275 in event_loop
File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/__main__.py", line 892 in init
File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/__main__.py", line 1043 in
File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 87 in _run_code
File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 197 in _run_module_as_main
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{
"uptime" : 280000,
"procRole" : "Background",
"version" : 2,
"userID" : 501,
"deployVersion" : 210,
"modelCode" : "Mac14,2",
"coalitionID" : 885,
"osVersion" : {
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"build" : "22G91",
"releaseType" : "User"
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"captureTime" : "2023-09-18 15:01:46.4366 -0400",
"incident" : "7ACA0302-99D5-4615-BD82-3B51BEC233C8",
"pid" : 69443,
"translated" : false,
"cpuType" : "ARM-64",
"roots_installed" : 0,
"bug_type" : "309",
"procLaunch" : "2023-09-18 11:49:12.6828 -0400",
"procStartAbsTime" : 6630084134129,
"procExitAbsTime" : 6896217218223,
"procName" : "ChimeraX",
"procPath" : "\/Applications\/ChimeraX-1.6.1.app\/Contents\/MacOS\/ChimeraX",
"bundleInfo" : {"CFBundleShortVersionString":"1.6.1","CFBundleVersion":"1.6.1.0","CFBundleIdentifier":"edu.ucsf.cgl.ChimeraX"},
"storeInfo" : {"deviceIdentifierForVendor":"F2A0B2FA-B61F-5734-BA89-599109DA1F98","thirdParty":true},
"parentProc" : "launchd",
"parentPid" : 1,
"coalitionName" : "edu.ucsf.cgl.ChimeraX",
"crashReporterKey" : "04CBAFB6-075B-CE76-D44A-FD9D049AF824",
"codeSigningID" : "edu.ucsf.cgl.ChimeraX",
"codeSigningTeamID" : "LWV8X224YF",
"codeSigningFlags" : 570491649,
"codeSigningValidationCategory" : 6,
"codeSigningTrustLevel" : 0,
"wakeTime" : 6,
"sleepWakeUUID" : "B63AFAD8-8BE0-45A1-8791-F894A58981DB",
"sip" : "enabled",
"vmRegionInfo" : "0x18 is not in any region. Bytes before following region: 105553518919656\n REGION TYPE START - END [ VSIZE] PRT\/MAX SHRMOD REGION DETAIL\n UNUSED SPACE AT START\n---> \n MALLOC_NANO (reserved) 600018000000-600020000000 [128.0M] rw-\/rwx SM=NUL ...(unallocated)",
"exception" : {"codes":"0x0000000000000001, 0x0000000000000018","rawCodes":[1,24],"type":"EXC_BAD_ACCESS","signal":"SIGSEGV","subtype":"KERN_INVALID_ADDRESS at 0x0000000000000018"},
"termination" : {"flags":0,"code":11,"namespace":"SIGNAL","indicator":"Segmentation fault: 11","byProc":"ChimeraX","byPid":69443},
"vmregioninfo" : "0x18 is not in any region. Bytes before following region: 105553518919656\n REGION TYPE START - END [ VSIZE] PRT\/MAX SHRMOD REGION DETAIL\n UNUSED SPACE AT START\n---> \n MALLOC_NANO (reserved) 600018000000-600020000000 [128.0M] rw-\/rwx SM=NUL ...(unallocated)",
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"queue" : "com.apple.main-thread"
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===== Log before crash start =====
Startup Messages
---
warnings | Unable to find icon for toolbar provider 'Dump Bead Data' in bundle
'ChimeraX-GenomeTools'
Unable to find icon for toolbar provider 'Highlight' in bundle 'ChimeraX-
GenomeTools'
Unable to find icon for toolbar provider 'Bed Models' in bundle 'ChimeraX-
GenomeTools'
Unable to find icon for toolbar provider 'Bead Overlap' in bundle 'ChimeraX-
GenomeTools'
Unable to find icon for toolbar provider 'Genome Distance' in bundle
'ChimeraX-GenomeTools'
1 messages similar to the above omitted
> camera ortho
> cofr centerOfView
> mousemode rightMode clip
> mousemode alt rightMode "contour level"
> mousemode alt leftMode "move picked models"
> alias cofron cofr centerofview showpivot true
> alias cofroff cofr centerofview showpivot false
> alias symclip cofr centerofview; clip near -$1 far $1 position cofr
> alias cootmode surface cap false; surface style solid; lighting flat;
> graphics silhouettes false; style stick; ~rib; color ##num_residues gold;
> color byhet ; disp; ~disp @H*; style solvent ball; size ballscale 0.1; size
> stickradius 0.07; transparency 70; cofr centerofview; clip near -10 far 10
> position cofr; color ##~num_residues cornflower blue
> alias cootmode_mesh surface cap false; surface style mesh; lighting flat;
> graphics silhouettes false; style stick; ~rib; color ##num_residues gold;
> color byhet ; disp; ~disp @H*; style solvent ball; size ballscale 0.1; size
> stickradius 0.07; cofr centerofview; clip near -10 far 10 position cofr;
> color ##~num_residues #3d60ffff; transparency 50
> alias ca_and_sidechains ~rib $1; ~surf $1; ~disp $1; disp @CA&protein&$1;
> disp @P&nucleic&$1; style $1 stick; disp sidechain&$1; disp
> ~backbone&nucleic&$1; size stickradius 0.1; size pseudobondradius 0.1
> alias ca_trace ~rib $1; ~surf $1; ~disp $1; disp @CA&protein&$1; disp
> @P&nucleic&$1; style $1 stick; size stickradius 0.1; size pseudobondradius
> 0.1
> alias map_sphere_15 surface unzone ##~num_residues; sel; close #10000;
> marker #10000 position cofr; sel ~sel; surface zone ##~num_residues
> nearAtoms sel distance 15; close #10000
> alias map_unsphere surface unzone ##~num_residues
> alias default_mol_display ~disp; rib; rainbow chain palette RdYlBu-5;
> lighting soft
> alias hidemaps surface unzone ##~num_residues; sel; close #10000; marker
> #10000 position cofr; sel ~sel; surface zone ##~num_residues nearAtoms sel
> distance 0; close #10000
> alias showmaps surface unzone ##~num_residues
> buttonpanel Shortcuts rows 3 columns 4
> buttonpanel Shortcuts add Vol_Viewer command "tool show 'Volume Viewer'"
> buttonpanel Shortcuts add Model_Panel command "tool show Models"
> buttonpanel Shortcuts add Log command "tool show Log"
> buttonpanel Shortcuts add default_disp command default_mol_display
> buttonpanel Shortcuts add map_sphere command map_sphere_15
> buttonpanel Shortcuts add map_unsphere command map_unsphere
> buttonpanel Shortcuts add cofron command cofron
> buttonpanel Shortcuts add cofroff command cofroff
> buttonpanel Shortcuts add cootmode command cootmode
> buttonpanel Shortcuts add mark_cofr command "marker #10000 position cofr"
> buttonpanel Shortcuts add hidemaps command hidemaps
> buttonpanel Shortcuts add showmaps command showmaps
UCSF ChimeraX version: 1.6.1 (2023-05-09)
© 2016-2023 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open
> /Users/patrick/Documents/Research/scs7p/ESM/ESM_modification/esm_scs_fe_hem.pdb
Chain information for esm_scs_fe_hem.pdb #1
---
Chain | Description
A | No description available
Unsupported scale factor (0.000000) detected on Display0
QPainter::begin: Paint device returned engine == 0, type: 3
===== Log before crash end =====
Log:
Startup Messages
---
warnings | Unable to find icon for toolbar provider 'Dump Bead Data' in bundle
'ChimeraX-GenomeTools'
Unable to find icon for toolbar provider 'Highlight' in bundle 'ChimeraX-
GenomeTools'
Unable to find icon for toolbar provider 'Bed Models' in bundle 'ChimeraX-
GenomeTools'
Unable to find icon for toolbar provider 'Bead Overlap' in bundle 'ChimeraX-
GenomeTools'
Unable to find icon for toolbar provider 'Genome Distance' in bundle
'ChimeraX-GenomeTools'
1 messages similar to the above omitted
> camera ortho
> cofr centerOfView
> mousemode rightMode clip
> mousemode alt rightMode "contour level"
> mousemode alt leftMode "move picked models"
> alias cofron cofr centerofview showpivot true
> alias cofroff cofr centerofview showpivot false
> alias symclip cofr centerofview; clip near -$1 far $1 position cofr
> alias cootmode surface cap false; surface style solid; lighting flat;
> graphics silhouettes false; style stick; ~rib; color ##num_residues gold;
> color byhet ; disp; ~disp @H*; style solvent ball; size ballscale 0.1; size
> stickradius 0.07; transparency 70; cofr centerofview; clip near -10 far 10
> position cofr; color ##~num_residues cornflower blue
> alias cootmode_mesh surface cap false; surface style mesh; lighting flat;
> graphics silhouettes false; style stick; ~rib; color ##num_residues gold;
> color byhet ; disp; ~disp @H*; style solvent ball; size ballscale 0.1; size
> stickradius 0.07; cofr centerofview; clip near -10 far 10 position cofr;
> color ##~num_residues #3d60ffff; transparency 50
> alias ca_and_sidechains ~rib $1; ~surf $1; ~disp $1; disp @CA&protein&$1;
> disp @P&nucleic&$1; style $1 stick; disp sidechain&$1; disp
> ~backbone&nucleic&$1; size stickradius 0.1; size pseudobondradius 0.1
> alias ca_trace ~rib $1; ~surf $1; ~disp $1; disp @CA&protein&$1; disp
> @P&nucleic&$1; style $1 stick; size stickradius 0.1; size pseudobondradius
> 0.1
> alias map_sphere_15 surface unzone ##~num_residues; sel; close #10000;
> marker #10000 position cofr; sel ~sel; surface zone ##~num_residues
> nearAtoms sel distance 15; close #10000
> alias map_unsphere surface unzone ##~num_residues
> alias default_mol_display ~disp; rib; rainbow chain palette RdYlBu-5;
> lighting soft
> alias hidemaps surface unzone ##~num_residues; sel; close #10000; marker
> #10000 position cofr; sel ~sel; surface zone ##~num_residues nearAtoms sel
> distance 0; close #10000
> alias showmaps surface unzone ##~num_residues
> buttonpanel Shortcuts rows 3 columns 4
> buttonpanel Shortcuts add Vol_Viewer command "tool show 'Volume Viewer'"
> buttonpanel Shortcuts add Model_Panel command "tool show Models"
> buttonpanel Shortcuts add Log command "tool show Log"
> buttonpanel Shortcuts add default_disp command default_mol_display
> buttonpanel Shortcuts add map_sphere command map_sphere_15
> buttonpanel Shortcuts add map_unsphere command map_unsphere
> buttonpanel Shortcuts add cofron command cofron
> buttonpanel Shortcuts add cofroff command cofroff
> buttonpanel Shortcuts add cootmode command cootmode
> buttonpanel Shortcuts add mark_cofr command "marker #10000 position cofr"
> buttonpanel Shortcuts add hidemaps command hidemaps
> buttonpanel Shortcuts add showmaps command showmaps
UCSF ChimeraX version: 1.6.1 (2023-05-09)
© 2016-2023 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open /Volumes/KOBBY/run/open_QwikMD.pdb
Summary of feedback from opening /Volumes/KOBBY/run/open_QwikMD.pdb
---
warnings | Ignored bad PDB record found on line 100001
ATOM 186a0 H1 TIP3W8491 -53.190 21.986 28.409 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100002
ATOM 186a1 H2 TIP3W8491 -53.408 23.460 28.443 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100003
ATOM 186a2 OH2 TIP3W8492 -62.497 24.521 38.494 1.00 0.00 WT4 O
Ignored bad PDB record found on line 100004
ATOM 186a3 H1 TIP3W8492 -63.232 24.695 39.067 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100005
ATOM 186a4 H2 TIP3W8492 -62.891 24.322 37.649 1.00 0.00 WT4 H
91 messages similar to the above omitted
Duplicate atom serial number found: 18700
Duplicate atom serial number found: 18701
Duplicate atom serial number found: 18702
Duplicate atom serial number found: 18703
Duplicate atom serial number found: 18704
5 messages similar to the above omitted
Ignored bad PDB record found on line 100107
ATOM 1870a H2 TIP3W8540 -0.005 38.510 51.366 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100108
ATOM 1870b OH2 TIP3W8541 -4.828 18.645 43.391 1.00 0.00 WT4 O
Ignored bad PDB record found on line 100109
ATOM 1870c H1 TIP3W8541 -5.202 18.769 44.264 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100110
ATOM 1870d H2 TIP3W8541 -5.624 18.376 42.855 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100111
ATOM 1870e OH2 TIP3W8542 -6.564 29.510 57.415 1.00 0.00 WT4 O
1 messages similar to the above omitted
Duplicate atom serial number found: 18710
Duplicate atom serial number found: 18711
Duplicate atom serial number found: 18712
Duplicate atom serial number found: 18713
Duplicate atom serial number found: 18714
5 messages similar to the above omitted
Ignored bad PDB record found on line 100123
ATOM 1871a OH2 TIP3W8546 -7.609 30.629 52.163 1.00 0.00 WT4 O
Ignored bad PDB record found on line 100124
ATOM 1871b H1 TIP3W8546 -7.858 30.727 51.184 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100125
ATOM 1871c H2 TIP3W8546 -8.174 31.322 52.538 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100126
ATOM 1871d OH2 TIP3W8547 -13.663 29.986 54.249 1.00 0.00 WT4 O
Ignored bad PDB record found on line 100127
ATOM 1871e H1 TIP3W8547 -13.599 29.041 54.296 1.00 0.00 WT4 H
1 messages similar to the above omitted
Duplicate atom serial number found: 18720
Duplicate atom serial number found: 18721
Duplicate atom serial number found: 18722
Duplicate atom serial number found: 18723
Duplicate atom serial number found: 18724
5 messages similar to the above omitted
Ignored bad PDB record found on line 100139
ATOM 1872a H1 TIP3W8551 -58.347 36.125 9.087 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100140
ATOM 1872b H2 TIP3W8551 -58.584 35.131 10.235 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100141
ATOM 1872c OH2 TIP3W8553 -0.987 40.204 21.682 1.00 0.00 WT4 O
Ignored bad PDB record found on line 100142
ATOM 1872d H1 TIP3W8553 -0.678 40.169 22.615 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100143
ATOM 1872e H2 TIP3W8553 -0.964 41.196 21.576 1.00 0.00 WT4 H
1 messages similar to the above omitted
Duplicate atom serial number found: 18730
Duplicate atom serial number found: 18731
Duplicate atom serial number found: 18732
Duplicate atom serial number found: 18733
Duplicate atom serial number found: 18734
5 messages similar to the above omitted
Ignored bad PDB record found on line 100155
ATOM 1873a H2 TIP3W8557 -10.901 26.506 49.169 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100156
ATOM 1873b OH2 TIP3W8558 -62.077 27.095 20.490 1.00 0.00 WT4 O
Ignored bad PDB record found on line 100157
ATOM 1873c H1 TIP3W8558 -63.012 26.829 20.621 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100158
ATOM 1873d H2 TIP3W8558 -61.972 27.350 19.538 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100159
ATOM 1873e OH2 TIP3W8559 -11.844 11.973 34.827 1.00 0.00 WT4 O
1 messages similar to the above omitted
Duplicate atom serial number found: 18740
Duplicate atom serial number found: 18741
Duplicate atom serial number found: 18742
Duplicate atom serial number found: 18743
Duplicate atom serial number found: 18744
5 messages similar to the above omitted
Ignored bad PDB record found on line 100171
ATOM 1874a OH2 TIP3W8563 -2.990 38.986 33.089 1.00 0.00 WT4 O
Ignored bad PDB record found on line 100172
ATOM 1874b H1 TIP3W8563 -2.114 39.298 32.822 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100173
ATOM 1874c H2 TIP3W8563 -2.969 37.958 32.986 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100174
ATOM 1874d OH2 TIP3W8564 -25.001 28.918 48.897 1.00 0.00 WT4 O
Ignored bad PDB record found on line 100175
ATOM 1874e H1 TIP3W8564 -24.635 28.077 49.070 1.00 0.00 WT4 H
1 messages similar to the above omitted
Duplicate atom serial number found: 18750
Duplicate atom serial number found: 18751
Duplicate atom serial number found: 18752
Duplicate atom serial number found: 18753
Duplicate atom serial number found: 18754
5 messages similar to the above omitted
Ignored bad PDB record found on line 100187
ATOM 1875a H1 TIP3W8568 -24.624 35.170 51.929 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100188
ATOM 1875b H2 TIP3W8568 -23.675 35.316 53.125 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100189
ATOM 1875c OH2 TIP3W8569 -1.046 36.996 64.016 1.00 0.00 WT4 O
Ignored bad PDB record found on line 100190
ATOM 1875d H1 TIP3W8569 -1.092 37.985 63.901 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100191
ATOM 1875e H2 TIP3W8569 -1.011 36.597 63.172 1.00 0.00 WT4 H
1 messages similar to the above omitted
Duplicate atom serial number found: 18760
Duplicate atom serial number found: 18761
Duplicate atom serial number found: 18762
Duplicate atom serial number found: 18763
Duplicate atom serial number found: 18764
5 messages similar to the above omitted
Ignored bad PDB record found on line 100203
ATOM 1876a H2 TIP3W8574 -60.536 28.836 20.633 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100204
ATOM 1876b OH2 TIP3W8575 -19.441 39.296 36.193 1.00 0.00 WT4 O
Ignored bad PDB record found on line 100205
ATOM 1876c H1 TIP3W8575 -18.678 39.927 36.071 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100206
ATOM 1876d H2 TIP3W8575 -19.784 39.538 37.072 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100207
ATOM 1876e OH2 TIP3W8576 -54.047 38.158 19.327 1.00 0.00 WT4 O
1 messages similar to the above omitted
Duplicate atom serial number found: 18770
Duplicate atom serial number found: 18771
Duplicate atom serial number found: 18772
Duplicate atom serial number found: 18773
Duplicate atom serial number found: 18774
5 messages similar to the above omitted
Ignored bad PDB record found on line 100219
ATOM 1877a OH2 TIP3W8580 0.323 36.536 48.925 1.00 0.00 WT4 O
Ignored bad PDB record found on line 100220
ATOM 1877b H1 TIP3W8580 0.087 37.437 48.645 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100221
ATOM 1877c H2 TIP3W8580 0.336 36.664 49.882 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100222
ATOM 1877d OH2 TIP3W8581 -0.982 22.369 53.571 1.00 0.00 WT4 O
Ignored bad PDB record found on line 100223
ATOM 1877e H1 TIP3W8581 -1.750 22.880 53.318 1.00 0.00 WT4 H
1 messages similar to the above omitted
Duplicate atom serial number found: 18780
Duplicate atom serial number found: 18781
Duplicate atom serial number found: 18782
Duplicate atom serial number found: 18783
Duplicate atom serial number found: 18784
5 messages similar to the above omitted
Ignored bad PDB record found on line 100235
ATOM 1878a H1 TIP3W8585 -61.923 28.668 53.249 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100236
ATOM 1878b H2 TIP3W8585 -62.957 27.532 52.653 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100237
ATOM 1878c OH2 TIP3W8586 -4.613 33.406 57.058 1.00 0.00 WT4 O
Ignored bad PDB record found on line 100238
ATOM 1878d H1 TIP3W8586 -5.222 33.107 57.742 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100239
ATOM 1878e H2 TIP3W8586 -3.936 33.864 57.615 1.00 0.00 WT4 H
1 messages similar to the above omitted
Duplicate atom serial number found: 18790
Duplicate atom serial number found: 18791
Duplicate atom serial number found: 18792
Duplicate atom serial number found: 18793
Duplicate atom serial number found: 18794
5 messages similar to the above omitted
Ignored bad PDB record found on line 100251
ATOM 1879a H2 TIP3W8591 -2.064 26.319 28.785 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100252
ATOM 1879b OH2 TIP3W8592 -6.965 44.414 13.948 1.00 0.00 WT4 O
Ignored bad PDB record found on line 100253
ATOM 1879c H1 TIP3W8592 -7.843 44.344 13.626 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100254
ATOM 1879d H2 TIP3W8592 -7.039 44.503 14.922 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100255
ATOM 1879e OH2 TIP3W8593 -11.676 37.452 6.767 1.00 0.00 WT4 O
97 messages similar to the above omitted
Duplicate atom serial number found: 18800
Duplicate atom serial number found: 18801
Duplicate atom serial number found: 18802
Duplicate atom serial number found: 18803
Duplicate atom serial number found: 18804
5 messages similar to the above omitted
Ignored bad PDB record found on line 100363
ATOM 1880a OH2 TIP3W8633 -6.155 37.201 13.114 1.00 0.00 WT4 O
Ignored bad PDB record found on line 100364
ATOM 1880b H1 TIP3W8633 -5.767 37.937 12.622 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100365
ATOM 1880c H2 TIP3W8633 -6.433 37.633 13.912 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100366
ATOM 1880d OH2 TIP3W8634 0.345 34.599 10.356 1.00 0.00 WT4 O
Ignored bad PDB record found on line 100367
ATOM 1880e H1 TIP3W8634 0.371 35.563 10.747 1.00 0.00 WT4 H
1 messages similar to the above omitted
Duplicate atom serial number found: 18810
Duplicate atom serial number found: 18811
Duplicate atom serial number found: 18812
Duplicate atom serial number found: 18813
Duplicate atom serial number found: 18814
5 messages similar to the above omitted
Ignored bad PDB record found on line 100379
ATOM 1881a H1 TIP3W8638 -6.573 30.086 20.753 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100380
ATOM 1881b H2 TIP3W8638 -6.985 29.359 22.067 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100381
ATOM 1881c OH2 TIP3W8639 -13.112 37.695 34.440 1.00 0.00 WT4 O
Ignored bad PDB record found on line 100382
ATOM 1881d H1 TIP3W8639 -13.050 38.258 35.193 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100383
ATOM 1881e H2 TIP3W8639 -13.753 38.128 33.866 1.00 0.00 WT4 H
1 messages similar to the above omitted
Duplicate atom serial number found: 18820
Duplicate atom serial number found: 18821
Duplicate atom serial number found: 18822
Duplicate atom serial number found: 18823
Duplicate atom serial number found: 18824
5 messages similar to the above omitted
Ignored bad PDB record found on line 100395
ATOM 1882a H2 TIP3W8644 -0.674 40.531 42.661 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100396
ATOM 1882b OH2 TIP3W8645 -63.731 31.107 32.573 1.00 0.00 WT4 O
Ignored bad PDB record found on line 100397
ATOM 1882c H1 TIP3W8645 -64.057 30.489 33.262 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100398
ATOM 1882d H2 TIP3W8645 -64.034 32.015 32.743 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100399
ATOM 1882e OH2 TIP3W8646 -5.054 39.845 34.854 1.00 0.00 WT4 O
1 messages similar to the above omitted
Duplicate atom serial number found: 18830
Duplicate atom serial number found: 18831
Duplicate atom serial number found: 18832
Duplicate atom serial number found: 18833
Duplicate atom serial number found: 18834
5 messages similar to the above omitted
Ignored bad PDB record found on line 100411
ATOM 1883a OH2 TIP3W8650 -10.164 34.160 63.725 1.00 0.00 WT4 O
Ignored bad PDB record found on line 100412
ATOM 1883b H1 TIP3W8650 -10.516 33.496 64.306 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100413
ATOM 1883c H2 TIP3W8650 -10.928 34.577 63.344 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100414
ATOM 1883d OH2 TIP3W8651 -16.617 45.384 62.346 1.00 0.00 WT4 O
Ignored bad PDB record found on line 100415
ATOM 1883e H1 TIP3W8651 -16.486 45.966 63.116 1.00 0.00 WT4 H
1 messages similar to the above omitted
Duplicate atom serial number found: 18840
Duplicate atom serial number found: 18841
Duplicate atom serial number found: 18842
Duplicate atom serial number found: 18843
Duplicate atom serial number found: 18844
5 messages similar to the above omitted
Ignored bad PDB record found on line 100427
ATOM 1884a H1 TIP3W8657 -9.481 55.908 15.723 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100428
ATOM 1884b H2 TIP3W8657 -9.392 57.295 15.034 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100429
ATOM 1884c OH2 TIP3W8658 -61.920 39.698 41.889 1.00 0.00 WT4 O
Ignored bad PDB record found on line 100430
ATOM 1884d H1 TIP3W8658 -62.507 39.194 41.277 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100431
ATOM 1884e H2 TIP3W8658 -62.379 40.537 42.020 1.00 0.00 WT4 H
1 messages similar to the above omitted
Duplicate atom serial number found: 18850
Duplicate atom serial number found: 18851
Duplicate atom serial number found: 18852
Duplicate atom serial number found: 18853
Duplicate atom serial number found: 18854
5 messages similar to the above omitted
Ignored bad PDB record found on line 100443
ATOM 1885a H2 TIP3W8663 -4.337 54.426 42.940 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100444
ATOM 1885b OH2 TIP3W8664 -16.066 46.804 44.481 1.00 0.00 WT4 O
Ignored bad PDB record found on line 100445
ATOM 1885c H1 TIP3W8664 -16.620 47.533 44.779 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100446
ATOM 1885d H2 TIP3W8664 -16.718 46.069 44.342 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100447
ATOM 1885e OH2 TIP3W8665 -11.101 45.827 40.474 1.00 0.00 WT4 O
1 messages similar to the above omitted
Duplicate atom serial number found: 18860
Duplicate atom serial number found: 18861
Duplicate atom serial number found: 18862
Duplicate atom serial number found: 18863
Duplicate atom serial number found: 18864
5 messages similar to the above omitted
Ignored bad PDB record found on line 100459
ATOM 1886a OH2 TIP3W8669 -11.261 29.016 60.191 1.00 0.00 WT4 O
Ignored bad PDB record found on line 100460
ATOM 1886b H1 TIP3W8669 -12.154 29.201 60.449 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100461
ATOM 1886c H2 TIP3W8669 -10.923 29.904 60.097 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100462
ATOM 1886d OH2 TIP3W8670 -3.330 44.986 48.332 1.00 0.00 WT4 O
Ignored bad PDB record found on line 100463
ATOM 1886e H1 TIP3W8670 -2.623 45.233 48.880 1.00 0.00 WT4 H
1 messages similar to the above omitted
Duplicate atom serial number found: 18870
Duplicate atom serial number found: 18871
Duplicate atom serial number found: 18872
Duplicate atom serial number found: 18873
Duplicate atom serial number found: 18874
5 messages similar to the above omitted
Ignored bad PDB record found on line 100475
ATOM 1887a H1 TIP3W8677 -49.940 57.297 10.449 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100476
ATOM 1887b H2 TIP3W8677 -50.012 55.984 9.632 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100477
ATOM 1887c OH2 TIP3W8678 -17.278 50.475 21.157 1.00 0.00 WT4 O
Ignored bad PDB record found on line 100478
ATOM 1887d H1 TIP3W8678 -17.670 49.718 21.667 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100479
ATOM 1887e H2 TIP3W8678 -18.003 51.129 21.026 1.00 0.00 WT4 H
1 messages similar to the above omitted
Duplicate atom serial number found: 18880
Duplicate atom serial number found: 18881
Duplicate atom serial number found: 18882
Duplicate atom serial number found: 18883
Duplicate atom serial number found: 18884
5 messages similar to the above omitted
Ignored bad PDB record found on line 100491
ATOM 1888a H2 TIP3W8682 -0.978 43.395 22.285 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100492
ATOM 1888b OH2 TIP3W8683 -63.593 37.187 27.273 1.00 0.00 WT4 O
Ignored bad PDB record found on line 100493
ATOM 1888c H1 TIP3W8683 -63.854 37.234 26.393 1.00 0.00 WT4 H
Ignored bad PDB record found on line 100494
ATOM 1888d H2 TIP3W8683 -62.893 37.820 27.260 1.00 0.00 WT4 H
[lots of this deleted]
1 messages similar to the above omitted
Duplicate atom serial number found: 29850
Duplicate atom serial number found: 29851
Duplicate atom serial number found: 29852
Duplicate atom serial number found: 29853
Duplicate atom serial number found: 29854
5 messages similar to the above omitted
Ignored bad PDB record found on line 170075
ATOM 2985a H1 TIP3W1394 14.956 9.508 34.269 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170076
ATOM 2985b H2 TIP3W1394 15.463 8.014 34.644 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170077
ATOM 2985c OH2 TIP3W1395 5.064 9.805 46.281 1.00 0.00 WT8 O
Ignored bad PDB record found on line 170078
ATOM 2985d H1 TIP3W1395 4.427 9.308 45.718 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170079
ATOM 2985e H2 TIP3W1395 4.649 9.723 47.155 1.00 0.00 WT8 H
1 messages similar to the above omitted
Duplicate atom serial number found: 29860
Duplicate atom serial number found: 29861
Duplicate atom serial number found: 29862
Duplicate atom serial number found: 29863
Duplicate atom serial number found: 29864
5 messages similar to the above omitted
Ignored bad PDB record found on line 170091
ATOM 2986a H2 TIP3W1400 8.944 14.746 52.803 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170092
ATOM 2986b OH2 TIP3W1401 2.856 8.035 45.500 1.00 0.00 WT8 O
Ignored bad PDB record found on line 170093
ATOM 2986c H1 TIP3W1401 3.213 7.287 45.005 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170094
ATOM 2986d H2 TIP3W1401 2.377 7.569 46.208 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170095
ATOM 2986e OH2 TIP3W1402 11.737 23.771 55.207 1.00 0.00 WT8 O
1 messages similar to the above omitted
Duplicate atom serial number found: 29870
Duplicate atom serial number found: 29871
Duplicate atom serial number found: 29872
Duplicate atom serial number found: 29873
Duplicate atom serial number found: 29874
5 messages similar to the above omitted
Ignored bad PDB record found on line 170107
ATOM 2987a OH2 TIP3W1408 5.618 26.981 7.090 1.00 0.00 WT8 O
Ignored bad PDB record found on line 170108
ATOM 2987b H1 TIP3W1408 6.343 26.603 7.524 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170109
ATOM 2987c H2 TIP3W1408 4.957 26.333 7.128 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170110
ATOM 2987d OH2 TIP3W1409 3.927 7.726 61.567 1.00 0.00 WT8 O
Ignored bad PDB record found on line 170111
ATOM 2987e H1 TIP3W1409 4.578 7.232 62.158 1.00 0.00 WT8 H
1 messages similar to the above omitted
Duplicate atom serial number found: 29880
Duplicate atom serial number found: 29881
Duplicate atom serial number found: 29882
Duplicate atom serial number found: 29883
Duplicate atom serial number found: 29884
5 messages similar to the above omitted
Ignored bad PDB record found on line 170123
ATOM 2988a H1 TIP3W1418 12.060 4.237 25.345 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170124
ATOM 2988b H2 TIP3W1418 12.875 3.168 26.016 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170125
ATOM 2988c OH2 TIP3W1419 14.901 22.981 45.638 1.00 0.00 WT8 O
Ignored bad PDB record found on line 170126
ATOM 2988d H1 TIP3W1419 15.620 23.474 45.163 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170127
ATOM 2988e H2 TIP3W1419 14.758 22.124 45.223 1.00 0.00 WT8 H
1 messages similar to the above omitted
Duplicate atom serial number found: 29890
Duplicate atom serial number found: 29891
Duplicate atom serial number found: 29892
Duplicate atom serial number found: 29893
Duplicate atom serial number found: 29894
5 messages similar to the above omitted
Ignored bad PDB record found on line 170139
ATOM 2989a H2 TIP3W1423 55.252 10.981 57.099 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170140
ATOM 2989b OH2 TIP3W1424 18.671 10.674 53.631 1.00 0.00 WT8 O
Ignored bad PDB record found on line 170141
ATOM 2989c H1 TIP3W1424 18.959 11.088 52.831 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170142
ATOM 2989d H2 TIP3W1424 18.442 9.762 53.335 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170143
ATOM 2989e OH2 TIP3W1426 12.123 16.423 62.742 1.00 0.00 WT8 O
97 messages similar to the above omitted
Duplicate atom serial number found: 29900
Duplicate atom serial number found: 29901
Duplicate atom serial number found: 29902
Duplicate atom serial number found: 29903
Duplicate atom serial number found: 29904
5 messages similar to the above omitted
Ignored bad PDB record found on line 170251
ATOM 2990a OH2 TIP3W1481 21.557 25.861 38.954 1.00 0.00 WT8 O
Ignored bad PDB record found on line 170252
ATOM 2990b H1 TIP3W1481 21.097 25.226 38.334 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170253
ATOM 2990c H2 TIP3W1481 20.781 26.104 39.582 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170254
ATOM 2990d OH2 TIP3W1482 59.199 19.586 30.134 1.00 0.00 WT8 O
Ignored bad PDB record found on line 170255
ATOM 2990e H1 TIP3W1482 60.111 19.622 30.056 1.00 0.00 WT8 H
1 messages similar to the above omitted
Duplicate atom serial number found: 29910
Duplicate atom serial number found: 29911
Duplicate atom serial number found: 29912
Duplicate atom serial number found: 29913
Duplicate atom serial number found: 29914
5 messages similar to the above omitted
Ignored bad PDB record found on line 170267
ATOM 2991a H1 TIP3W1486 2.826 26.726 56.387 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170268
ATOM 2991b H2 TIP3W1486 3.180 26.679 54.867 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170269
ATOM 2991c OH2 TIP3W1488 12.589 33.713 56.495 1.00 0.00 WT8 O
Ignored bad PDB record found on line 170270
ATOM 2991d H1 TIP3W1488 13.433 33.166 56.502 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170271
ATOM 2991e H2 TIP3W1488 11.988 33.155 56.980 1.00 0.00 WT8 H
1 messages similar to the above omitted
Duplicate atom serial number found: 29920
Duplicate atom serial number found: 29921
Duplicate atom serial number found: 29922
Duplicate atom serial number found: 29923
Duplicate atom serial number found: 29924
5 messages similar to the above omitted
Ignored bad PDB record found on line 170283
ATOM 2992a H2 TIP3W1495 29.142 24.205 59.144 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170284
ATOM 2992b OH2 TIP3W1498 11.792 54.644 29.195 1.00 0.00 WT8 O
Ignored bad PDB record found on line 170285
ATOM 2992c H1 TIP3W1498 12.173 54.774 28.277 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170286
ATOM 2992d H2 TIP3W1498 10.862 54.390 28.965 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170287
ATOM 2992e OH2 TIP3W1499 13.086 28.075 25.963 1.00 0.00 WT8 O
1 messages similar to the above omitted
Duplicate atom serial number found: 29930
Duplicate atom serial number found: 29931
Duplicate atom serial number found: 29932
Duplicate atom serial number found: 29933
Duplicate atom serial number found: 29934
5 messages similar to the above omitted
Ignored bad PDB record found on line 170299
ATOM 2993a OH2 TIP3W1504 18.482 26.620 35.781 1.00 0.00 WT8 O
Ignored bad PDB record found on line 170300
ATOM 2993b H1 TIP3W1504 17.789 26.383 35.173 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170301
ATOM 2993c H2 TIP3W1504 18.081 27.195 36.441 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170302
ATOM 2993d OH2 TIP3W1505 9.021 26.517 53.298 1.00 0.00 WT8 O
Ignored bad PDB record found on line 170303
ATOM 2993e H1 TIP3W1505 9.435 25.670 53.032 1.00 0.00 WT8 H
1 messages similar to the above omitted
Duplicate atom serial number found: 29940
Duplicate atom serial number found: 29941
Duplicate atom serial number found: 29942
Duplicate atom serial number found: 29943
Duplicate atom serial number found: 29944
5 messages similar to the above omitted
Ignored bad PDB record found on line 170315
ATOM 2994a H1 TIP3W1512 12.343 22.234 16.800 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170316
ATOM 2994b H2 TIP3W1512 10.924 22.267 16.798 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170317
ATOM 2994c OH2 TIP3W1513 13.002 29.990 60.977 1.00 0.00 WT8 O
Ignored bad PDB record found on line 170318
ATOM 2994d H1 TIP3W1513 12.639 30.938 60.838 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170319
ATOM 2994e H2 TIP3W1513 12.251 29.395 60.716 1.00 0.00 WT8 H
1 messages similar to the above omitted
Duplicate atom serial number found: 29950
Duplicate atom serial number found: 29951
Duplicate atom serial number found: 29952
Duplicate atom serial number found: 29953
Duplicate atom serial number found: 29954
5 messages similar to the above omitted
Ignored bad PDB record found on line 170331
ATOM 2995a H2 TIP3W1520 11.247 30.518 41.485 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170332
ATOM 2995b OH2 TIP3W1522 6.601 32.351 38.959 1.00 0.00 WT8 O
Ignored bad PDB record found on line 170333
ATOM 2995c H1 TIP3W1522 7.366 32.334 38.299 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170334
ATOM 2995d H2 TIP3W1522 5.994 31.687 38.556 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170335
ATOM 2995e OH2 TIP3W1523 18.371 30.938 35.295 1.00 0.00 WT8 O
1 messages similar to the above omitted
Duplicate atom serial number found: 29960
Duplicate atom serial number found: 29961
Duplicate atom serial number found: 29962
Duplicate atom serial number found: 29963
Duplicate atom serial number found: 29964
5 messages similar to the above omitted
Ignored bad PDB record found on line 170347
ATOM 2996a OH2 TIP3W1527 2.342 34.803 48.060 1.00 0.00 WT8 O
Ignored bad PDB record found on line 170348
ATOM 2996b H1 TIP3W1527 1.686 34.120 48.072 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170349
ATOM 2996c H2 TIP3W1527 1.872 35.603 48.416 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170350
ATOM 2996d OH2 TIP3W1528 24.530 46.248 52.685 1.00 0.00 WT8 O
Ignored bad PDB record found on line 170351
ATOM 2996e H1 TIP3W1528 25.235 46.054 53.271 1.00 0.00 WT8 H
1 messages similar to the above omitted
Duplicate atom serial number found: 29970
Duplicate atom serial number found: 29971
Duplicate atom serial number found: 29972
Duplicate atom serial number found: 29973
Duplicate atom serial number found: 29974
5 messages similar to the above omitted
Ignored bad PDB record found on line 170363
ATOM 2997a H1 TIP3W1532 13.942 23.831 21.809 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170364
ATOM 2997b H2 TIP3W1532 15.356 24.287 21.795 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170365
ATOM 2997c OH2 TIP3W1533 7.665 18.057 61.689 1.00 0.00 WT8 O
Ignored bad PDB record found on line 170366
ATOM 2997d H1 TIP3W1533 7.101 17.740 60.973 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170367
ATOM 2997e H2 TIP3W1533 8.583 18.017 61.310 1.00 0.00 WT8 H
1 messages similar to the above omitted
Duplicate atom serial number found: 29980
Duplicate atom serial number found: 29981
Duplicate atom serial number found: 29982
Duplicate atom serial number found: 29983
Duplicate atom serial number found: 29984
5 messages similar to the above omitted
Ignored bad PDB record found on line 170379
ATOM 2998a H2 TIP3W1537 17.003 36.573 17.765 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170380
ATOM 2998b OH2 TIP3W1538 16.330 33.816 19.141 1.00 0.00 WT8 O
Ignored bad PDB record found on line 170381
ATOM 2998c H1 TIP3W1538 16.406 34.443 18.380 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170382
ATOM 2998d H2 TIP3W1538 17.185 33.913 19.578 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170383
ATOM 2998e OH2 TIP3W1540 19.061 35.691 23.493 1.00 0.00 WT8 O
1 messages similar to the above omitted
Duplicate atom serial number found: 29990
Duplicate atom serial number found: 29991
Duplicate atom serial number found: 29992
Duplicate atom serial number found: 29993
Duplicate atom serial number found: 29994
5 messages similar to the above omitted
Ignored bad PDB record found on line 170395
ATOM 2999a OH2 TIP3W1545 18.044 33.672 39.263 1.00 0.00 WT8 O
Ignored bad PDB record found on line 170396
ATOM 2999b H1 TIP3W1545 17.680 33.729 40.207 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170397
ATOM 2999c H2 TIP3W1545 17.709 34.576 38.902 1.00 0.00 WT8 H
Ignored bad PDB record found on line 170398
ATOM 2999d OH2 TIP3W1546 2.996 36.021 35.397 1.00 0.00 WT8 O
Ignored bad PDB record found on line 170399
ATOM 2999e H1 TIP3W1546 2.508 35.246 35.096 1.00 0.00 WT8 H
17324 messages similar to the above omitted
Chain information for open_QwikMD.pdb #1
---
Chain | Description
A | No description available
OpenGL version: 4.1 Metal - 83.1
OpenGL renderer: Apple M2
OpenGL vendor: Apple
Python: 3.9.11
Locale: UTF-8
Qt version: PyQt6 6.4.2, Qt 6.4.2
Qt runtime version: 6.4.3
Qt platform: cocoa
Hardware:
Hardware Overview:
Model Name: MacBook Air
Model Identifier: Mac14,2
Model Number: Z160000AKLL/A
Chip: Apple M2
Total Number of Cores: 8 (4 performance and 4 efficiency)
Memory: 8 GB
System Firmware Version: 8422.141.2
OS Loader Version: 8422.141.2
Software:
System Software Overview:
System Version: macOS 13.5.2 (22G91)
Kernel Version: Darwin 22.6.0
Time since boot: 5 days, 20 hours, 46 minutes
Graphics/Displays:
Apple M2:
Chipset Model: Apple M2
Type: GPU
Bus: Built-In
Total Number of Cores: 8
Vendor: Apple (0x106b)
Metal Support: Metal 3
Displays:
Color LCD:
Display Type: Built-in Liquid Retina Display
Resolution: 2560 x 1664 Retina
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: Yes
Connection Type: Internal
DELL U2417H:
Resolution: 1920 x 1080 (1080p FHD - Full High Definition)
UI Looks like: 1920 x 1080 @ 60.00Hz
Mirror: Off
Online: Yes
Rotation: Supported
Installed Packages:
alabaster: 0.7.13
appdirs: 1.4.4
appnope: 0.1.3
asttokens: 2.2.1
Babel: 2.12.1
backcall: 0.2.0
beautifulsoup4: 4.11.2
blockdiag: 3.0.0
build: 0.10.0
certifi: 2021.10.8
cftime: 1.6.2
charset-normalizer: 3.1.0
ChimeraX-AddCharge: 1.5.9.1
ChimeraX-AddH: 2.2.5
ChimeraX-AlignmentAlgorithms: 2.0.1
ChimeraX-AlignmentHdrs: 3.3.1
ChimeraX-AlignmentMatrices: 2.1
ChimeraX-Alignments: 2.9.3
ChimeraX-AlphaFold: 1.0
ChimeraX-AltlocExplorer: 1.0.3
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.1
ChimeraX-Atomic: 1.43.10
ChimeraX-AtomicLibrary: 10.0.6
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.3.2
ChimeraX-BasicActions: 1.1.2
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.1.2
ChimeraX-BondRot: 2.0.1
ChimeraX-BugReporter: 1.0.1
ChimeraX-BuildStructure: 2.8
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.2.2
ChimeraX-ButtonPanel: 1.0.1
ChimeraX-CageBuilder: 1.0.1
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.3.2
ChimeraX-ChangeChains: 1.0.2
ChimeraX-CheckWaters: 1.3.1
ChimeraX-ChemGroup: 2.0.1
ChimeraX-Clashes: 2.2.4
ChimeraX-ColorActions: 1.0.3
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.3
ChimeraX-CommandLine: 1.2.5
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0.1
ChimeraX-Core: 1.6.1
ChimeraX-CoreFormats: 1.1
ChimeraX-coulombic: 1.4.2
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0.1
ChimeraX-DataFormats: 1.2.3
ChimeraX-Dicom: 1.2
ChimeraX-DistMonitor: 1.4
ChimeraX-DockPrep: 1.1.1
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ESMFold: 1.0
ChimeraX-FileHistory: 1.0.1
ChimeraX-FunctionKey: 1.0.1
ChimeraX-GenomeTools: 0.9
ChimeraX-Geometry: 1.3
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1.1
ChimeraX-Hbonds: 2.4
ChimeraX-Help: 1.2.1
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ItemsInspection: 1.0.1
ChimeraX-Label: 1.1.7
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.5
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.2
ChimeraX-Map: 1.1.4
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0.1
ChimeraX-MapFilter: 2.0.1
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1.1
ChimeraX-Markers: 1.0.1
ChimeraX-Mask: 1.0.2
ChimeraX-MatchMaker: 2.0.12
ChimeraX-MDcrds: 2.6
ChimeraX-MedicalToolbar: 1.0.2
ChimeraX-Meeting: 1.0.1
ChimeraX-MLP: 1.1.1
ChimeraX-mmCIF: 2.12
ChimeraX-MMTF: 2.2
ChimeraX-Modeller: 1.5.9
ChimeraX-ModelPanel: 1.3.7
ChimeraX-ModelSeries: 1.0.1
ChimeraX-Mol2: 2.0
ChimeraX-Mole: 1.0
ChimeraX-Morph: 1.0.2
ChimeraX-MouseModes: 1.2
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nifti: 1.0
ChimeraX-NRRD: 1.0
ChimeraX-Nucleotides: 2.0.3
ChimeraX-OpenCommand: 1.10.1
ChimeraX-OpenCommands: 1.1
ChimeraX-PDB: 2.7.2
ChimeraX-PDBBio: 1.0
ChimeraX-PDBImages: 1.1
ChimeraX-PDBLibrary: 1.0.2
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0.1
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1
ChimeraX-PubChem: 2.1
ChimeraX-QScore: 1.0
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-RenderByAttr: 1.1
ChimeraX-RenumberResidues: 1.1
ChimeraX-ResidueFit: 1.0.1
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 3.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5.1
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0.1
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0.1
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.8.3
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0.1
ChimeraX-Shortcuts: 1.1.1
ChimeraX-ShowSequences: 1.0.1
ChimeraX-SideView: 1.0.1
ChimeraX-Smiles: 2.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.10.3
ChimeraX-STL: 1.0.1
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.1.2
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0.1
ChimeraX-SwapAA: 2.0.1
ChimeraX-SwapRes: 2.2.1
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.1.2
ChimeraX-ToolshedUtils: 1.2.1
ChimeraX-Topography: 1.0
ChimeraX-Tug: 1.0.1
ChimeraX-UI: 1.28.4
ChimeraX-uniprot: 2.2.2
ChimeraX-UnitCell: 1.0.1
ChimeraX-ViewDockX: 1.2
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0.1
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0.2
ChimeraX-WebServices: 1.1.1
ChimeraX-Zone: 1.0.1
colorama: 0.4.6
comm: 0.1.3
contourpy: 1.0.7
cxservices: 1.2.2
cycler: 0.11.0
Cython: 0.29.33
debugpy: 1.6.7
decorator: 5.1.1
docutils: 0.19
executing: 1.2.0
filelock: 3.9.0
fonttools: 4.39.3
funcparserlib: 1.0.1
grako: 3.16.5
h5py: 3.8.0
html2text: 2020.1.16
idna: 3.4
ihm: 0.35
imagecodecs: 2022.2.22
imagesize: 1.4.1
importlib-metadata: 6.6.0
ipykernel: 6.21.1
ipython: 8.10.0
ipython-genutils: 0.2.0
ipywidgets: 8.0.6
jedi: 0.18.2
Jinja2: 3.1.2
jupyter-client: 8.0.2
jupyter-core: 5.3.0
jupyterlab-widgets: 3.0.7
kiwisolver: 1.4.4
line-profiler: 4.0.2
lxml: 4.9.2
lz4: 4.3.2
MarkupSafe: 2.1.2
matplotlib: 3.6.3
matplotlib-inline: 0.1.6
MolecularDynamicsViewer: 1.4
msgpack: 1.0.4
nest-asyncio: 1.5.6
netCDF4: 1.6.2
networkx: 2.8.8
nibabel: 5.0.1
nptyping: 2.5.0
numexpr: 2.8.4
numpy: 1.23.5
openvr: 1.23.701
packaging: 21.3
ParmEd: 3.4.3
parso: 0.8.3
pep517: 0.13.0
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 9.3.0
pip: 23.0
pkginfo: 1.9.6
platformdirs: 3.5.0
prompt-toolkit: 3.0.38
psutil: 5.9.4
ptyprocess: 0.7.0
pure-eval: 0.2.2
pycollada: 0.7.2
pydicom: 2.3.0
Pygments: 2.14.0
pynrrd: 1.0.0
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 3.0.9
pyproject-hooks: 1.0.0
PyQt6-commercial: 6.4.2
PyQt6-Qt6: 6.4.3
PyQt6-sip: 13.4.1
PyQt6-WebEngine-commercial: 6.4.0
PyQt6-WebEngine-Qt6: 6.4.3
python-dateutil: 2.8.2
pytz: 2023.3
pyzmq: 25.0.2
qtconsole: 5.4.0
QtPy: 2.3.1
RandomWords: 0.4.0
requests: 2.28.2
scipy: 1.9.3
Send2Trash: 1.8.2
SEQCROW: 1.7.3
setuptools: 67.4.0
setuptools-scm: 7.0.5
sfftk-rw: 0.7.3
six: 1.16.0
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
soupsieve: 2.4.1
sphinx: 6.1.3
sphinx-autodoc-typehints: 1.22
sphinxcontrib-applehelp: 1.0.4
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 2.0.1
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.5
stack-data: 0.6.2
tables: 3.7.0
tcia-utils: 1.2.0
tifffile: 2022.10.10
tinyarray: 1.2.4
tomli: 2.0.1
tornado: 6.3.1
traitlets: 5.9.0
typing-extensions: 4.5.0
tzdata: 2023.3
urllib3: 1.26.15
wcwidth: 0.2.6
webcolors: 1.12
wheel: 0.38.4
wheel-filename: 1.4.1
widgetsnbextension: 4.0.7
zipp: 3.15.0
Change History (2)
comment:1 by , 2 years ago
| Cc: | added |
|---|---|
| Component: | Unassigned → Window Toolkit |
| Description: | modified (diff) |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → accepted |
| Summary: | ChimeraX bug report submission → Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device returned engine == 0 |
comment:2 by , 2 years ago
| Resolution: | → duplicate |
|---|---|
| Status: | accepted → closed |
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