![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 2 years ago
Closed 2 years ago
#9796 closed defect (duplicate)
Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device returned engine == 0
| Reported by: | Owned by: | Eric Pettersen | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Window Toolkit | Version: | |
| Keywords: | Cc: | Tom Goddard | |
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: macOS-13.5.2-arm64-arm-64bit
ChimeraX Version: 1.6.1 (2023-05-09 17:57:07 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Fatal Python error: Segmentation fault
Current thread 0x00000001f30f2080 (most recent call first):
File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/ui/gui.py", line 275 in event_loop
File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/__main__.py", line 892 in init
File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/__main__.py", line 1043 in
File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 87 in _run_code
File "/Applications/ChimeraX-1.6.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 197 in _run_module_as_main
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{
"uptime" : 59000,
"procRole" : "Foreground",
"version" : 2,
"userID" : 501,
"deployVersion" : 210,
"modelCode" : "Mac14,6",
"coalitionID" : 1003,
"osVersion" : {
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"build" : "22G91",
"releaseType" : "User"
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"captureTime" : "2023-09-18 10:33:06.6607 +0200",
"incident" : "E16F71C7-D830-4611-BDD9-4417324F1630",
"pid" : 2225,
"translated" : false,
"cpuType" : "ARM-64",
"roots_installed" : 0,
"bug_type" : "309",
"procLaunch" : "2023-09-13 14:10:09.3610 +0200",
"procStartAbsTime" : 3538659447,
"procExitAbsTime" : 1423397071997,
"procName" : "ChimeraX",
"procPath" : "\/Applications\/ChimeraX-1.6.1.app\/Contents\/MacOS\/ChimeraX",
"bundleInfo" : {"CFBundleShortVersionString":"1.6.1","CFBundleVersion":"1.6.1.0","CFBundleIdentifier":"edu.ucsf.cgl.ChimeraX"},
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"parentProc" : "launchd",
"parentPid" : 1,
"coalitionName" : "edu.ucsf.cgl.ChimeraX",
"crashReporterKey" : "8CD86EF6-8702-0484-11FC-43DCE9C516F0",
"codeSigningID" : "edu.ucsf.cgl.ChimeraX",
"codeSigningTeamID" : "LWV8X224YF",
"codeSigningFlags" : 570491649,
"codeSigningValidationCategory" : 6,
"codeSigningTrustLevel" : 0,
"wakeTime" : 10,
"sleepWakeUUID" : "EA826A5F-4250-458A-BAB6-4788B494AC50",
"sip" : "enabled",
"vmRegionInfo" : "0x18 is not in any region. Bytes before following region: 105554055790568\n REGION TYPE START - END [ VSIZE] PRT\/MAX SHRMOD REGION DETAIL\n UNUSED SPACE AT START\n---> \n MALLOC_NANO (reserved) 600038000000-600040000000 [128.0M] rw-\/rwx SM=NUL ...(unallocated)",
"exception" : {"codes":"0x0000000000000001, 0x0000000000000018","rawCodes":[1,24],"type":"EXC_BAD_ACCESS","signal":"SIGSEGV","subtype":"KERN_INVALID_ADDRESS at 0x0000000000000018"},
"termination" : {"flags":0,"code":11,"namespace":"SIGNAL","indicator":"Segmentation fault: 11","byProc":"ChimeraX","byPid":2225},
"vmregioninfo" : "0x18 is not in any region. Bytes before following region: 105554055790568\n REGION TYPE START - END [ VSIZE] PRT\/MAX SHRMOD REGION DETAIL\n UNUSED SPACE AT START\n---> \n MALLOC_NANO (reserved) 600038000000-600040000000 [128.0M] rw-\/rwx SM=NUL ...(unallocated)",
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"vmSummary" : "ReadOnly portion of Libraries: Total=1.7G resident=0K(0%) swapped_out_or_unallocated=1.7G(100%)\nWritable regions: Total=17.7G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=17.7G(100%)\n\n VIRTUAL REGION \nREGION TYPE SIZE COUNT (non-coalesced) \n=========== ======= ======= \nAccelerate framework 256K 2 \nActivity Tracing 256K 1 \nCG backing stores 4800K 8 \nCG image 720K 35 \nColorSync 608K 30 \nCoreAnimation 336K 21 \nCoreGraphics 48K 3 \nCoreServices 624K 2 \nCoreUI image data 5184K 35 \nFoundation 32K 2 \nKernel Alloc Once 1536K 6 \nMALLOC 15.3G 573 \nMALLOC guard page 192K 11 \nMALLOC_MEDIUM (reserved) 880.0M 11 reserved VM address space (unallocated)\nMALLOC_NANO (reserved) 384.0M 1 reserved VM address space (unallocated)\nMach message 64K 4 \nOpenGL GLSL 384K 4 \nSTACK GUARD 784K 49 \nStack 176.2M 50 \nStack Guard 56.0M 1 \nVM_ALLOCATE 354.1M 756 \nVM_ALLOCATE (reserved) 640.0M 8 reserved VM address space (unallocated)\n__AUTH 1844K 369 \n__AUTH_CONST 28.7M 601 \n__CTF 824 1 \n__DATA 22.0M 804 \n__DATA_CONST 39.7M 808 \n__DATA_DIRTY 1973K 229 \n__FONT_DATA 2352 1 \n__GLSLBUILTINS 5174K 1 \n__INFO_FILTER 8 1 \n__LINKEDIT 837.5M 205 \n__OBJC_RO 66.4M 1 \n__OBJC_RW 2012K 1 \n__TEXT 886.7M 827 \ndyld private memory 272K 2 \nmapped file 215.6M 56 \nshared memory 3232K 30 \n=========== ======= ======= \nTOTAL 19.8G 5550 \nTOTAL, minus reserved VM space 17.9G 5550 \n",
"legacyInfo" : {
"threadTriggered" : {
"name" : "CrBrowserMain",
"queue" : "com.apple.main-thread"
}
},
"logWritingSignature" : "a31fdf70bcfd76ea6f51b50a70118cbfeb04d803",
"trialInfo" : {
"rollouts" : [
{
"rolloutId" : "62699e1ec1ff2978b47f6c3b",
"factorPackIds" : {
"SIRI_FIND_MY_CONFIGURATION_FILES" : "631f72d1de559130376df1fb"
},
"deploymentId" : 240000023
},
{
"rolloutId" : "63582c5f8a53461413999550",
"factorPackIds" : {
},
"deploymentId" : 240000002
}
],
"experiments" : [
{
"treatmentId" : "6dd670af-0633-45e4-ae5f-122ae4df02be",
"experimentId" : "64406ba83deb637ac8a04419",
"deploymentId" : 900000017
},
{
"treatmentId" : "a092db1b-c401-44fa-9c54-518b7d69ca61",
"experimentId" : "64a844035c85000c0f42398a",
"deploymentId" : 400000019
}
]
}
}
===== Log before crash start =====
Startup Messages
---
note | available bundle cache has not been initialized yet
UCSF ChimeraX version: 1.6.1 (2023-05-09)
© 2016-2023 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> help help:quickstart
> open
> /Users/lulu/Documents/PostDoc/ParD,E/Structure/predicted/AF-A0A0N9MZH1-F1-model_v4_YpstParE.pdb
Summary of feedback from opening
/Users/lulu/Documents/PostDoc/ParD,E/Structure/predicted/AF-A0A0N9MZH1-F1-model_v4_YpstParE.pdb
---
warning | Ignored bad PDB record found on line 37
DBREF XXXX A 1 99 UNP A0A0N9MZH1 A0A0N9MZH1_YERPU 1 99
AF-A0A0N9MZH1-F1-model_v4_YpstParE.pdb title:
Alphafold monomer V2.0 prediction for toxin (A0A0N9MZH1) [more info...]
Chain information for AF-A0A0N9MZH1-F1-model_v4_YpstParE.pdb #1
---
Chain | Description
A | TOXIN
> show atoms
> hide atoms
> show cartoons
> hide cartoons
> show cartoons
> style stick
Changed 824 atom styles
> style stick
Changed 824 atom styles
> style sphere
Changed 824 atom styles
> color byhetero
> color bychain
> color bypolymer
> rainbow
> coulombic
Using Amber 20 recommended default charges and atom types for standard
residues
Coulombic values for AF-A0A0N9MZH1-F1-model_v4_YpstParE.pdb_A SES surface
#1.1: minimum, -14.72, mean -2.50, maximum 9.53
To also show corresponding color key, enter the above coulombic command and
add key true
> coulombic
Coulombic values for AF-A0A0N9MZH1-F1-model_v4_YpstParE.pdb_A SES surface
#1.1: minimum, -14.72, mean -2.50, maximum 9.53
To also show corresponding color key, enter the above coulombic command and
add key true
> style sphere
Changed 824 atom styles
> style stick
Changed 824 atom styles
> color byhetero
> color bychain
> color bypolymer
> rainbow
> coulombic
Coulombic values for AF-A0A0N9MZH1-F1-model_v4_YpstParE.pdb_A SES surface
#1.1: minimum, -14.72, mean -2.50, maximum 9.53
To also show corresponding color key, enter the above coulombic command and
add key true
> hide surfaces
> show surfaces
> hide surfaces
> style stick
Changed 824 atom styles
> show atoms
> hide atoms
> show atoms
> style ball
Changed 824 atom styles
> hide surfaces
> hide cartoons
> ~hbonds
> set bgColor white
> view
> ui tool show "Side View"
> show cartoons
> hide atoms
> show cartoons
> show atoms
> hide cartoons
> ui mousemode right select
Drag select of 1 atoms
> select clear
> ui mousemode right rotate
> ui mousemode right translate
> ui mousemode right zoom
> select /A
824 atoms, 843 bonds, 99 residues, 1 model selected
> select subtract #1
1 model selected
> select add #1
824 atoms, 843 bonds, 99 residues, 1 model selected
> select subtract #1
1 model selected
> select add #1
824 atoms, 843 bonds, 99 residues, 1 model selected
> select subtract #1
1 model selected
> hide #!1 models
> show #!1 models
> ui tool show "Side View"
> view orient
> hide atoms
> show cartoons
> open /Users/lulu/Downloads/ChimeraX/AlphaFold/prediction_1/best_model.pdb
Chain information for best_model.pdb #2
---
Chain | Description
A | No description available
B | No description available
> hide #!1 models
> view
> rainbow #2
> color #2 bypolymer
> sym #1 best_model 1 copies t
Expected a keyword
> sym #1 assemble 1 copies t
Expected a keyword
> view orient
> help sym
> sym #1 assmebly 1
Expected a keyword
> sym #1 assmebly best_model
Expected a keyword
> sym #1 assmebly 2
Expected a keyword
> sym #1 assmebly 2 copies true
Expected a keyword
> sym #2 assmebly 1
Expected a keyword
> sym #2
best_model.pdb mmCIF Assemblies
---
> open 3kxe
Summary of feedback from opening 3kxe fetched from pdb
---
note | Fetching compressed mmCIF 3kxe from
http://files.rcsb.org/download/3kxe.cif
3kxe title:
A conserved mode of protein recognition and binding in a ParD-ParE toxin-
antitoxin complex [more info...]
Chain information for 3kxe #3
---
Chain | Description | UniProt
A B | Toxin protein parE-1 | B8H242_CAUCN 1-96
C D | Antitoxin protein parD-1 | B8H243_CAUCN 1-88
> select add #3
2731 atoms, 2731 bonds, 383 residues, 1 model selected
> select subtract #3
Nothing selected
> select add #3
2731 atoms, 2731 bonds, 383 residues, 1 model selected
> select subtract #3
Nothing selected
> zoom 1
> turn 180
Expected an axis vector or a keyword
> zoom 1
> turn x 180
> zoom 1
> turn x 180
> zoom 1
> turn x 180
> zoom 1
> turn x 180
> zoom 1
> turn x 180
> zoom 1
> turn x 180
> zoom 1
> turn x 180
> zoom 1
> turn x 180
> zoom 1
> turn y 180
> zoom 1
> turn y 180
> zoom 1
> turn y 180
> zoom 1
> turn y 180
> zoom 1
> turn y 180
> zoom 1
> turn y 180
> zoom 1
> turn y 180
> zoom 1
> turn y 180
> zoom 1
> turn y 180
> zoom 1
> turn y 180
> zoom 1
> turn y 180
> zoom 1
> turn y 180
> zoom 1
> turn z 180
> zoom 1
> turn z 180
> zoom 1
> turn z 180
> zoom 1
> turn z 180
> zoom 1
> turn z 180
> zoom 1
> turn z 180
> surface 1
Expected an atoms specifier or a keyword
> surface 3kxe
Expected an atoms specifier or a keyword
> hide /a
> hide #3 models
> show Ca
> cartoon style modeHelix tube
> cartoon style modeHelix helix
Invalid "modeHelix" argument: Should be one of 'default', 'tube', or 'wrap'
> cartoon style modeHelix default
> cartoon style modeHelix wrap
> cartoon style modeHelix tube
> close
> open 5vms
Summary of feedback from opening 5vms fetched from pdb
---
notes | Fetching compressed mmCIF 5vms from
http://files.rcsb.org/download/5vms.cif
Fetching CCD CA from
https://files.wwpdb.org/pub/pdb/refdata/chem_comp/A/CA/CA.cif
5vms title:
CryoEM structure of Xenopus KCNQ1 channel [more info...]
Chain information for 5vms #1
---
Chain | Description | UniProt
A | Potassium voltage-gated channel subfamily KQT member 1 | KCNQ1_XENLA
67-610
B | Calmodulin | CALM_HUMAN 1-149
Non-standard residues in 5vms #1
---
CA — calcium ion
5vms mmCIF Assemblies
---
1| complete point assembly
2| point asymmetric unit
3| point asymmetric unit, std point frame
> sym #1 assmebly 1 copies t
Expected a keyword
> sym #1 assmebly 1
Expected a keyword
> sym #1 assmebly 1.1
Expected a keyword
> sym #1 assmebly 5vms
Expected a keyword
> close #1
> open 5vms format mmcif fromDatabase pdb
5vms title:
CryoEM structure of Xenopus KCNQ1 channel [more info...]
Chain information for 5vms #1
---
Chain | Description | UniProt
A | Potassium voltage-gated channel subfamily KQT member 1 | KCNQ1_XENLA
67-610
B | Calmodulin | CALM_HUMAN 1-149
Non-standard residues in 5vms #1
---
CA — calcium ion
5vms mmCIF Assemblies
---
1| complete point assembly
2| point asymmetric unit
3| point asymmetric unit, std point frame
> sym #1 assembly 1
Made 4 copies for 5vms assembly 1
> sym #1 assembly 1 copies true
Made 4 copies for 5vms assembly 1
> zoom 1.1
> turn x 180
> surface /a
> hide /a cartoons
> hide /b
> show Ca
> hide pbonds
> cartoon style modeHelix tube
> lighting gentle
> set silhouettes true
> set silhouetteDepthJump 0.02
> size ions atomRadius 1.6
Changed 27 atom radii
> color modify ions hue +45
> rainbow palette pubu-5
> help palette
> rainbow polymers palette pubu-5
> save "/Users/lulu/Downloads/ChimeraX/practice/5vms practice.cxs"
> save /Users/lulu/Downloads/ChimeraX/practice/5vms.png width 1152 height 903
> supersample 3
> zoom 5vms
Expected a number > 0 or a keyword
> zoom #1
Expected a number > 0 or a keyword
> zoom 1
> zoom 2
> zoom 3
> zoom 1
> save "/Users/lulu/Downloads/ChimeraX/practice/5vms practice.cxs"
Unsupported scale factor (0.000000) detected on Display0
QPainter::begin: Paint device returned engine == 0, type: 3
===== Log before crash end =====
Log:
UCSF ChimeraX version: 1.6.1 (2023-05-09)
© 2016-2023 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 Metal - 83.1
OpenGL renderer: Apple M2 Max
OpenGL vendor: Apple
Python: 3.9.11
Locale: UTF-8
Qt version: PyQt6 6.4.2, Qt 6.4.2
Qt runtime version: 6.4.3
Qt platform: cocoa
Hardware:
Hardware Overview:
Model Name: MacBook Pro
Model Identifier: Mac14,6
Model Number: MNWE3KS/A
Chip: Apple M2 Max
Total Number of Cores: 12 (8 performance and 4 efficiency)
Memory: 32 GB
System Firmware Version: 8422.141.2
OS Loader Version: 8422.141.2
Software:
System Software Overview:
System Version: macOS 13.5.2 (22G91)
Kernel Version: Darwin 22.6.0
Time since boot: 4 days, 20 hours, 40 minutes
Graphics/Displays:
Apple M2 Max:
Chipset Model: Apple M2 Max
Type: GPU
Bus: Built-In
Total Number of Cores: 38
Vendor: Apple (0x106b)
Metal Support: Metal 3
Displays:
Color LCD:
Display Type: Built-in Liquid Retina XDR Display
Resolution: 3456 x 2234 Retina
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: Yes
Connection Type: Internal
SyncMaster:
Resolution: 1920 x 1080 (1080p FHD - Full High Definition)
UI Looks like: 1920 x 1080 @ 60.00Hz
Mirror: Off
Online: Yes
Rotation: Supported
Installed Packages:
alabaster: 0.7.13
appdirs: 1.4.4
appnope: 0.1.3
asttokens: 2.2.1
Babel: 2.12.1
backcall: 0.2.0
beautifulsoup4: 4.11.2
blockdiag: 3.0.0
build: 0.10.0
certifi: 2021.10.8
cftime: 1.6.2
charset-normalizer: 3.1.0
ChimeraX-AddCharge: 1.5.9.1
ChimeraX-AddH: 2.2.5
ChimeraX-AlignmentAlgorithms: 2.0.1
ChimeraX-AlignmentHdrs: 3.3.1
ChimeraX-AlignmentMatrices: 2.1
ChimeraX-Alignments: 2.9.3
ChimeraX-AlphaFold: 1.0
ChimeraX-AltlocExplorer: 1.0.3
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.1
ChimeraX-Atomic: 1.43.10
ChimeraX-AtomicLibrary: 10.0.6
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.3.2
ChimeraX-BasicActions: 1.1.2
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.1.2
ChimeraX-BondRot: 2.0.1
ChimeraX-BugReporter: 1.0.1
ChimeraX-BuildStructure: 2.8
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.2.2
ChimeraX-ButtonPanel: 1.0.1
ChimeraX-CageBuilder: 1.0.1
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.3.2
ChimeraX-ChangeChains: 1.0.2
ChimeraX-CheckWaters: 1.3.1
ChimeraX-ChemGroup: 2.0.1
ChimeraX-Clashes: 2.2.4
ChimeraX-ColorActions: 1.0.3
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.3
ChimeraX-CommandLine: 1.2.5
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0.1
ChimeraX-Core: 1.6.1
ChimeraX-CoreFormats: 1.1
ChimeraX-coulombic: 1.4.2
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0.1
ChimeraX-DataFormats: 1.2.3
ChimeraX-Dicom: 1.2
ChimeraX-DistMonitor: 1.4
ChimeraX-DockPrep: 1.1.1
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ESMFold: 1.0
ChimeraX-FileHistory: 1.0.1
ChimeraX-FunctionKey: 1.0.1
ChimeraX-Geometry: 1.3
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1.1
ChimeraX-Hbonds: 2.4
ChimeraX-Help: 1.2.1
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ItemsInspection: 1.0.1
ChimeraX-Label: 1.1.7
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.5
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.2
ChimeraX-Map: 1.1.4
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0.1
ChimeraX-MapFilter: 2.0.1
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1.1
ChimeraX-Markers: 1.0.1
ChimeraX-Mask: 1.0.2
ChimeraX-MatchMaker: 2.0.12
ChimeraX-MDcrds: 2.6
ChimeraX-MedicalToolbar: 1.0.2
ChimeraX-Meeting: 1.0.1
ChimeraX-MLP: 1.1.1
ChimeraX-mmCIF: 2.12
ChimeraX-MMTF: 2.2
ChimeraX-Modeller: 1.5.9
ChimeraX-ModelPanel: 1.3.7
ChimeraX-ModelSeries: 1.0.1
ChimeraX-Mol2: 2.0
ChimeraX-Mole: 1.0
ChimeraX-Morph: 1.0.2
ChimeraX-MouseModes: 1.2
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nifti: 1.0
ChimeraX-NRRD: 1.0
ChimeraX-Nucleotides: 2.0.3
ChimeraX-OpenCommand: 1.10.1
ChimeraX-PDB: 2.7.2
ChimeraX-PDBBio: 1.0
ChimeraX-PDBLibrary: 1.0.2
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0.1
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1
ChimeraX-PubChem: 2.1
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-RenderByAttr: 1.1
ChimeraX-RenumberResidues: 1.1
ChimeraX-ResidueFit: 1.0.1
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 3.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5.1
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0.1
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0.1
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.8.3
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0.1
ChimeraX-Shortcuts: 1.1.1
ChimeraX-ShowSequences: 1.0.1
ChimeraX-SideView: 1.0.1
ChimeraX-Smiles: 2.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.10.3
ChimeraX-STL: 1.0.1
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.1.2
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0.1
ChimeraX-SwapAA: 2.0.1
ChimeraX-SwapRes: 2.2.1
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.1.2
ChimeraX-ToolshedUtils: 1.2.1
ChimeraX-Topography: 1.0
ChimeraX-Tug: 1.0.1
ChimeraX-UI: 1.28.4
ChimeraX-uniprot: 2.2.2
ChimeraX-UnitCell: 1.0.1
ChimeraX-ViewDockX: 1.2
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0.1
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0.2
ChimeraX-WebServices: 1.1.1
ChimeraX-Zone: 1.0.1
colorama: 0.4.6
comm: 0.1.3
contourpy: 1.0.7
cxservices: 1.2.2
cycler: 0.11.0
Cython: 0.29.33
debugpy: 1.6.7
decorator: 5.1.1
docutils: 0.19
executing: 1.2.0
filelock: 3.9.0
fonttools: 4.39.3
funcparserlib: 1.0.1
grako: 3.16.5
h5py: 3.8.0
html2text: 2020.1.16
idna: 3.4
ihm: 0.35
imagecodecs: 2022.2.22
imagesize: 1.4.1
importlib-metadata: 6.6.0
ipykernel: 6.21.1
ipython: 8.10.0
ipython-genutils: 0.2.0
ipywidgets: 8.0.6
jedi: 0.18.2
Jinja2: 3.1.2
jupyter-client: 8.0.2
jupyter-core: 5.3.0
jupyterlab-widgets: 3.0.7
kiwisolver: 1.4.4
line-profiler: 4.0.2
lxml: 4.9.2
lz4: 4.3.2
MarkupSafe: 2.1.2
matplotlib: 3.6.3
matplotlib-inline: 0.1.6
msgpack: 1.0.4
nest-asyncio: 1.5.6
netCDF4: 1.6.2
networkx: 2.8.8
nibabel: 5.0.1
nptyping: 2.5.0
numexpr: 2.8.4
numpy: 1.23.5
openvr: 1.23.701
packaging: 21.3
ParmEd: 3.4.3
parso: 0.8.3
pep517: 0.13.0
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 9.3.0
pip: 23.0
pkginfo: 1.9.6
platformdirs: 3.5.0
prompt-toolkit: 3.0.38
psutil: 5.9.4
ptyprocess: 0.7.0
pure-eval: 0.2.2
pycollada: 0.7.2
pydicom: 2.3.0
Pygments: 2.14.0
pynrrd: 1.0.0
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 3.0.9
pyproject-hooks: 1.0.0
PyQt6-commercial: 6.4.2
PyQt6-Qt6: 6.4.3
PyQt6-sip: 13.4.1
PyQt6-WebEngine-commercial: 6.4.0
PyQt6-WebEngine-Qt6: 6.4.3
python-dateutil: 2.8.2
pytz: 2023.3
pyzmq: 25.0.2
qtconsole: 5.4.0
QtPy: 2.3.1
RandomWords: 0.4.0
requests: 2.28.2
scipy: 1.9.3
setuptools: 67.4.0
setuptools-scm: 7.0.5
sfftk-rw: 0.7.3
six: 1.16.0
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
soupsieve: 2.4.1
sphinx: 6.1.3
sphinx-autodoc-typehints: 1.22
sphinxcontrib-applehelp: 1.0.4
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 2.0.1
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.5
stack-data: 0.6.2
tables: 3.7.0
tcia-utils: 1.2.0
tifffile: 2022.10.10
tinyarray: 1.2.4
tomli: 2.0.1
tornado: 6.3.1
traitlets: 5.9.0
typing-extensions: 4.5.0
tzdata: 2023.3
urllib3: 1.26.15
wcwidth: 0.2.6
webcolors: 1.12
wheel: 0.38.4
wheel-filename: 1.4.1
widgetsnbextension: 4.0.7
zipp: 3.15.0
Change History (2)
comment:1 by , 2 years ago
| Cc: | added |
|---|---|
| Component: | Unassigned → Window Toolkit |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → accepted |
| Summary: | ChimeraX bug report submission → Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device returned engine == 0 |
comment:2 by , 2 years ago
| Resolution: | → duplicate |
|---|---|
| Status: | accepted → closed |
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