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Opened 2 years ago
Closed 2 years ago
#9673 closed defect (fixed)
Sequence viewer: bad nextCheckState() return value
| Reported by: | Owned by: | Eric Pettersen | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Sequence | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: Windows-10-10.0.19045
ChimeraX Version: 1.5 (2022-11-24 00:03:27 UTC)
Description
(Describe the actions that caused this problem to occur here)
Log:
UCSF ChimeraX version: 1.5 (2022-11-24)
© 2016-2022 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open "C:\\\Users\\\עופר\\\Dropbox\\\LAB_staff\\\HKR\\\PDE
> crystal\\\7cj3_Rho-PDE.pdb"
7cj3_Rho-PDE.pdb title:
Crystal structure of the transmembrane domain of salpingoeca rosetta rhodopsin
phosphodiesterase [more info...]
Chain information for 7cj3_Rho-PDE.pdb #1
---
Chain | Description | UniProt
A B | phosphodiesterase | F2TZN0_SALR5
Non-standard residues in 7cj3_Rho-PDE.pdb #1
---
OLC — (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate (1-oleoyl-R-glycerol)
RET — retinal
> color bychain
> open F2TZN0 fromDatabase uniprot
Summary of feedback from opening F2TZN0 fetched from uniprot
---
notes | Alignment identifier is F2TZN0
Associated 7cj3_Rho-PDE.pdb chain A to F2TZN0 with 7 mismatches
Associated 7cj3_Rho-PDE.pdb chain B to F2TZN0 with 7 mismatches
Opened UniProt F2TZN0
> ui tool show Matchmaker
> open C:/Users/עופר/Dropbox/LAB_staff/HKR/HKR1.fasta
Summary of feedback from opening
C:/Users/עופר/Dropbox/LAB_staff/HKR/HKR1.fasta
---
note | Alignment identifier is HKR1.fasta
Opened 1 sequences from HKR1.fasta
> ui tool show Matchmaker
> open C:/Users/עופר/Dropbox/LAB_staff/HKR/new2/opt/hkr-wASH239.pdb
Chain information for hkr-wASH239.pdb #2
---
Chain | Description
? | No description available
Associated hkr-wASH239.pdb chain (blank) to AAQ16277.3 HKR1 from
[Chlamydomonas reinhardtii] with 1 mismatch
> matchmaker #2 to #1 ssFraction 0.2968
Parameters
---
Chain pairing | bb
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.2968
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker 7cj3_Rho-PDE.pdb, chain A (#1) with hkr-wASH239.pdb, chain (blank)
(#2), sequence alignment score = 451.234
RMSD between 161 pruned atom pairs is 1.176 angstroms; (across all 254 pairs:
3.219)
> select #1/A-B:51-100
792 atoms, 818 bonds, 100 residues, 1 model selected
> select #1/A-B:51-310
4019 atoms, 4138 bonds, 520 residues, 1 model selected
> select #1/A-B:106-157
768 atoms, 778 bonds, 104 residues, 1 model selected
> select #1/A-B:106-310
3163 atoms, 3252 bonds, 410 residues, 1 model selected
> select clear
> hide #2 models
> select #1/A-B:173-223
746 atoms, 767 bonds, 102 residues, 1 model selected
> select #1/A-B:173-310
2131 atoms, 2196 bonds, 276 residues, 1 model selected
> select #1/A-B:56
8 atoms, 6 bonds, 2 residues, 1 model selected
> select #1/A-B:56-310
3935 atoms, 4050 bonds, 510 residues, 1 model selected
> select clear
> select #1/A-B:56-310
3935 atoms, 4050 bonds, 510 residues, 1 model selected
> select #1/A
2196 atoms, 2243 bonds, 277 residues, 1 model selected
> select #1/B
2206 atoms, 2249 bonds, 281 residues, 1 model selected
> select #1/A
2196 atoms, 2243 bonds, 277 residues, 1 model selected
> select clear
> squence
Unknown command: squence
>
Incomplete command: sequence
> show sequence
Expected a collection of one of 'atoms', 'bonds', 'cartoons', 'models',
'pbonds', 'pseudobonds', 'ribbons', or 'surfaces' or a keyword
> align
Missing or invalid "atoms" argument: empty atom specifier
Alignment identifier is 1
Missing or invalid "chains" argument: only initial part "#2" of atom specifier
valid
> sequence align 1 program muscle
Must specify 2 or more protein sequences
> select
> #1/A:49-73,75-86,88-113,116-143,158-181,183-205,208-239,249-276,280-310/B:48-73,75-86,88-113,116-143,158-181,183-205,208-239,249-276,280-310
3553 atoms, 3636 bonds, 459 residues, 1 model selected
> select
8584 atoms, 8739 bonds, 815 residues, 2 models selected
> select
8584 atoms, 8739 bonds, 815 residues, 2 models selected
> select
8584 atoms, 8739 bonds, 815 residues, 2 models selected
> select
8584 atoms, 8739 bonds, 815 residues, 2 models selected
QDockWidget failed to find relevant screen info. screenFrom:
QScreen(0x27cbe8ea020, name="\\\\\\\\.\\\DISPLAY2") screenTo:
QScreen(0x27cbe8ea020, name="\\\\\\\\.\\\DISPLAY2") wdgScreen:
QScreen(0x27cbe8ea020, name="\\\\\\\\.\\\DISPLAY2") orgWdgScreen QScreen(0x0)
[Repeated 104 time(s)]
> select
8584 atoms, 8739 bonds, 815 residues, 2 models selected
> select
8584 atoms, 8739 bonds, 815 residues, 2 models selected
> select
8584 atoms, 8739 bonds, 815 residues, 2 models selected
QDockWidget failed to find relevant screen info. screenFrom:
QScreen(0x27cbe8ea020, name="\\\\\\\\.\\\DISPLAY2") screenTo:
QScreen(0x27cbe8ea020, name="\\\\\\\\.\\\DISPLAY2") wdgScreen:
QScreen(0x27cbe8ea020, name="\\\\\\\\.\\\DISPLAY2") orgWdgScreen QScreen(0x0)
[Repeated 76 time(s)]
> select clear
> select
> #1/A:49-73,75-86,88-113,116-143,158-181,183-205,208-239,249-276,280-310/B:48-73,75-86,88-113,116-143,158-181,183-205,208-239,249-276,280-310
3553 atoms, 3636 bonds, 459 residues, 1 model selected
> select ~sel
5031 atoms, 5068 bonds, 356 residues, 2 models selected
>
Incomplete command: devel
> select ~
Expected an objects specifier or a keyword
> select alpha
Expected an objects specifier or a keyword
> select hel
Expected an objects specifier or a keyword
> select helix
6961 atoms, 7090 bonds, 663 residues, 2 models selected
> info residues sel
residue id #1/A:51 name GLU index 19
residue id #1/A:52 name VAL index 20
residue id #1/A:53 name GLN index 21
residue id #1/A:54 name TRP index 22
residue id #1/A:55 name GLN index 23
residue id #1/A:56 name GLY index 24
residue id #1/A:57 name ILE index 25
residue id #1/A:58 name PHE index 26
residue id #1/A:59 name MET index 27
residue id #1/A:60 name ILE index 28
residue id #1/A:61 name ILE index 29
residue id #1/A:62 name VAL index 30
residue id #1/A:63 name TRP index 31
residue id #1/A:64 name LEU index 32
residue id #1/A:65 name CYS index 33
residue id #1/A:66 name VAL index 34
residue id #1/A:67 name MET index 35
residue id #1/A:68 name GLY index 36
residue id #1/A:69 name SER index 37
residue id #1/A:70 name LEU index 38
residue id #1/A:71 name ILE index 39
residue id #1/A:72 name PHE index 40
residue id #1/A:73 name PHE index 41
residue id #1/A:75 name ASN index 43
residue id #1/A:76 name PRO index 44
residue id #1/A:77 name GLU index 45
residue id #1/A:78 name ALA index 46
residue id #1/A:79 name SER index 47
residue id #1/A:80 name ARG index 48
residue id #1/A:81 name ARG index 49
residue id #1/A:82 name VAL index 50
residue id #1/A:83 name PHE index 51
residue id #1/A:84 name ALA index 52
residue id #1/A:85 name LYS index 53
residue id #1/A:86 name PHE index 54
residue id #1/A:88 name HIS index 56
residue id #1/A:89 name LEU index 57
residue id #1/A:90 name GLN index 58
residue id #1/A:91 name SER index 59
residue id #1/A:92 name PHE index 60
residue id #1/A:93 name TYR index 61
residue id #1/A:94 name GLY index 62
residue id #1/A:95 name ALA index 63
residue id #1/A:96 name THR index 64
residue id #1/A:97 name SER index 65
residue id #1/A:98 name VAL index 66
residue id #1/A:99 name ALA index 67
residue id #1/A:100 name PHE index 68
residue id #1/A:101 name ALA index 69
residue id #1/A:102 name PHE index 70
residue id #1/A:103 name ALA index 71
residue id #1/A:104 name THR index 72
residue id #1/A:105 name GLY index 73
residue id #1/A:106 name LEU index 74
residue id #1/A:107 name ASP index 75
residue id #1/A:108 name ILE index 76
residue id #1/A:109 name LEU index 77
residue id #1/A:110 name ALA index 78
residue id #1/A:111 name TYR index 79
residue id #1/A:112 name VAL index 80
residue id #1/A:113 name ASN index 81
residue id #1/A:116 name SER index 84
residue id #1/A:117 name ASP index 85
residue id #1/A:118 name GLU index 86
residue id #1/A:119 name LYS index 87
residue id #1/A:120 name ARG index 88
residue id #1/A:121 name VAL index 89
residue id #1/A:122 name LEU index 90
residue id #1/A:123 name SER index 91
residue id #1/A:124 name GLY index 92
residue id #1/A:125 name ILE index 93
residue id #1/A:126 name LEU index 94
residue id #1/A:127 name ALA index 95
residue id #1/A:128 name TYR index 96
residue id #1/A:129 name VAL index 97
residue id #1/A:130 name ASP index 98
residue id #1/A:131 name GLY index 99
residue id #1/A:132 name VAL index 100
residue id #1/A:133 name ALA index 101
residue id #1/A:134 name CYS index 102
residue id #1/A:135 name ILE index 103
residue id #1/A:136 name SER index 104
residue id #1/A:137 name TYR index 105
residue id #1/A:138 name LEU index 106
residue id #1/A:139 name SER index 107
residue id #1/A:140 name MET index 108
residue id #1/A:141 name ALA index 109
residue id #1/A:142 name THR index 110
residue id #1/A:143 name LEU index 111
residue id #1/A:158 name TRP index 126
residue id #1/A:159 name LEU index 127
residue id #1/A:160 name MET index 128
residue id #1/A:161 name ARG index 129
residue id #1/A:162 name TYR index 130
residue id #1/A:163 name ALA index 131
residue id #1/A:164 name GLU index 132
residue id #1/A:165 name TRP index 133
residue id #1/A:166 name ILE index 134
residue id #1/A:167 name ILE index 135
residue id #1/A:168 name THR index 136
residue id #1/A:169 name CYS index 137
residue id #1/A:170 name PRO index 138
residue id #1/A:171 name THR index 139
residue id #1/A:172 name LEU index 140
residue id #1/A:173 name LEU index 141
residue id #1/A:174 name TYR index 142
residue id #1/A:175 name TRP index 143
residue id #1/A:176 name CYS index 144
residue id #1/A:177 name GLY index 145
residue id #1/A:178 name LEU index 146
residue id #1/A:179 name ALA index 147
residue id #1/A:180 name SER index 148
residue id #1/A:181 name ARG index 149
residue id #1/A:183 name ASP index 151
residue id #1/A:184 name ARG index 152
residue id #1/A:185 name SER index 153
residue id #1/A:186 name SER index 154
residue id #1/A:187 name VAL index 155
residue id #1/A:188 name SER index 156
residue id #1/A:189 name ASP index 157
residue id #1/A:190 name ILE index 158
residue id #1/A:191 name ALA index 159
residue id #1/A:192 name THR index 160
residue id #1/A:193 name ALA index 161
residue id #1/A:194 name ASP index 162
residue id #1/A:195 name ALA index 163
residue id #1/A:196 name LEU index 164
residue id #1/A:197 name LEU index 165
residue id #1/A:198 name LEU index 166
residue id #1/A:199 name ALA index 167
residue id #1/A:200 name GLY index 168
residue id #1/A:201 name GLY index 169
residue id #1/A:202 name ALA index 170
residue id #1/A:203 name LEU index 171
residue id #1/A:204 name SER index 172
residue id #1/A:205 name SER index 173
residue id #1/A:208 name PRO index 176
residue id #1/A:209 name SER index 177
residue id #1/A:210 name TRP index 178
residue id #1/A:211 name PRO index 179
residue id #1/A:212 name ALA index 180
residue id #1/A:213 name PHE index 181
residue id #1/A:214 name PHE index 182
residue id #1/A:215 name VAL index 183
residue id #1/A:216 name PHE index 184
residue id #1/A:217 name ALA index 185
residue id #1/A:218 name GLY index 186
residue id #1/A:219 name SER index 187
residue id #1/A:220 name PHE index 188
residue id #1/A:221 name ALA index 189
residue id #1/A:222 name THR index 190
residue id #1/A:223 name TYR index 191
residue id #1/A:224 name ILE index 192
residue id #1/A:225 name TYR index 193
residue id #1/A:226 name VAL index 194
residue id #1/A:227 name MET index 195
residue id #1/A:228 name LEU index 196
residue id #1/A:229 name HIS index 197
residue id #1/A:230 name MET index 198
residue id #1/A:231 name TRP index 199
residue id #1/A:232 name GLY index 200
residue id #1/A:233 name MET index 201
residue id #1/A:234 name PHE index 202
residue id #1/A:235 name GLY index 203
residue id #1/A:236 name LYS index 204
residue id #1/A:237 name ALA index 205
residue id #1/A:238 name MET index 206
residue id #1/A:239 name GLN index 207
residue id #1/A:249 name PRO index 217
residue id #1/A:250 name ARG index 218
residue id #1/A:251 name HIS index 219
residue id #1/A:252 name ALA index 220
residue id #1/A:253 name LEU index 221
residue id #1/A:254 name HIS index 222
residue id #1/A:255 name LEU index 223
residue id #1/A:256 name LEU index 224
residue id #1/A:257 name ARG index 225
residue id #1/A:258 name CYS index 226
residue id #1/A:259 name GLU index 227
residue id #1/A:260 name ILE index 228
residue id #1/A:261 name VAL index 229
residue id #1/A:262 name MET index 230
residue id #1/A:263 name SER index 231
residue id #1/A:264 name TRP index 232
residue id #1/A:265 name SER index 233
residue id #1/A:266 name ILE index 234
residue id #1/A:267 name PHE index 235
residue id #1/A:268 name PRO index 236
residue id #1/A:269 name LEU index 237
residue id #1/A:270 name VAL index 238
residue id #1/A:271 name GLU index 239
residue id #1/A:272 name PHE index 240
residue id #1/A:273 name LEU index 241
residue id #1/A:274 name ARG index 242
residue id #1/A:275 name ARG index 243
residue id #1/A:276 name GLN index 244
residue id #1/A:280 name ASP index 248
residue id #1/A:281 name PHE index 249
residue id #1/A:282 name GLN index 250
residue id #1/A:283 name VAL index 251
residue id #1/A:284 name GLY index 252
residue id #1/A:285 name GLU index 253
residue id #1/A:286 name ALA index 254
residue id #1/A:287 name MET index 255
residue id #1/A:288 name ASN index 256
residue id #1/A:289 name CYS index 257
residue id #1/A:290 name VAL index 258
residue id #1/A:291 name ALA index 259
residue id #1/A:292 name ASP index 260
residue id #1/A:293 name TYR index 261
residue id #1/A:294 name ALA index 262
residue id #1/A:295 name ALA index 263
residue id #1/A:296 name LYS index 264
residue id #1/A:297 name VAL index 265
residue id #1/A:298 name GLY index 266
residue id #1/A:299 name LEU index 267
residue id #1/A:300 name ALA index 268
residue id #1/A:301 name MET index 269
residue id #1/A:302 name ILE index 270
residue id #1/A:303 name MET index 271
residue id #1/A:304 name VAL index 272
residue id #1/A:305 name ASN index 273
residue id #1/A:306 name CYS index 274
residue id #1/A:307 name ASN index 275
residue id #1/A:308 name LEU index 276
residue id #1/A:309 name GLU index 277
residue id #1/A:310 name GLN index 278
residue id #1/B:48 name SER index 16
residue id #1/B:49 name THR index 17
residue id #1/B:50 name LYS index 18
residue id #1/B:51 name GLU index 19
residue id #1/B:52 name VAL index 20
residue id #1/B:53 name GLN index 21
residue id #1/B:54 name TRP index 22
residue id #1/B:55 name GLN index 23
residue id #1/B:56 name GLY index 24
residue id #1/B:57 name ILE index 25
residue id #1/B:58 name PHE index 26
residue id #1/B:59 name MET index 27
residue id #1/B:60 name ILE index 28
residue id #1/B:61 name ILE index 29
residue id #1/B:62 name VAL index 30
residue id #1/B:63 name TRP index 31
residue id #1/B:64 name LEU index 32
residue id #1/B:65 name CYS index 33
residue id #1/B:66 name VAL index 34
residue id #1/B:67 name MET index 35
residue id #1/B:68 name GLY index 36
residue id #1/B:69 name SER index 37
residue id #1/B:70 name LEU index 38
residue id #1/B:71 name ILE index 39
residue id #1/B:72 name PHE index 40
residue id #1/B:73 name PHE index 41
residue id #1/B:75 name ASN index 43
residue id #1/B:76 name PRO index 44
residue id #1/B:77 name GLU index 45
residue id #1/B:78 name ALA index 46
residue id #1/B:79 name SER index 47
residue id #1/B:80 name ARG index 48
residue id #1/B:81 name ARG index 49
residue id #1/B:82 name VAL index 50
residue id #1/B:83 name PHE index 51
residue id #1/B:84 name ALA index 52
residue id #1/B:85 name LYS index 53
residue id #1/B:86 name PHE index 54
residue id #1/B:88 name HIS index 56
residue id #1/B:89 name LEU index 57
residue id #1/B:90 name GLN index 58
residue id #1/B:91 name SER index 59
residue id #1/B:92 name PHE index 60
residue id #1/B:93 name TYR index 61
residue id #1/B:94 name GLY index 62
residue id #1/B:95 name ALA index 63
residue id #1/B:96 name THR index 64
residue id #1/B:97 name SER index 65
residue id #1/B:98 name VAL index 66
residue id #1/B:99 name ALA index 67
residue id #1/B:100 name PHE index 68
residue id #1/B:101 name ALA index 69
residue id #1/B:102 name PHE index 70
residue id #1/B:103 name ALA index 71
residue id #1/B:104 name THR index 72
residue id #1/B:105 name GLY index 73
residue id #1/B:106 name LEU index 74
residue id #1/B:107 name ASP index 75
residue id #1/B:108 name ILE index 76
residue id #1/B:109 name LEU index 77
residue id #1/B:110 name ALA index 78
residue id #1/B:111 name TYR index 79
residue id #1/B:112 name VAL index 80
residue id #1/B:113 name ASN index 81
residue id #1/B:116 name SER index 84
residue id #1/B:117 name ASP index 85
residue id #1/B:118 name GLU index 86
residue id #1/B:119 name LYS index 87
residue id #1/B:120 name ARG index 88
residue id #1/B:121 name VAL index 89
residue id #1/B:122 name LEU index 90
residue id #1/B:123 name SER index 91
residue id #1/B:124 name GLY index 92
residue id #1/B:125 name ILE index 93
residue id #1/B:126 name LEU index 94
residue id #1/B:127 name ALA index 95
residue id #1/B:128 name TYR index 96
residue id #1/B:129 name VAL index 97
residue id #1/B:130 name ASP index 98
residue id #1/B:131 name GLY index 99
residue id #1/B:132 name VAL index 100
residue id #1/B:133 name ALA index 101
residue id #1/B:134 name CYS index 102
residue id #1/B:135 name ILE index 103
residue id #1/B:136 name SER index 104
residue id #1/B:137 name TYR index 105
residue id #1/B:138 name LEU index 106
residue id #1/B:139 name SER index 107
residue id #1/B:140 name MET index 108
residue id #1/B:141 name ALA index 109
residue id #1/B:142 name THR index 110
residue id #1/B:143 name LEU index 111
residue id #1/B:158 name TRP index 126
residue id #1/B:159 name LEU index 127
residue id #1/B:160 name MET index 128
residue id #1/B:161 name ARG index 129
residue id #1/B:162 name TYR index 130
residue id #1/B:163 name ALA index 131
residue id #1/B:164 name GLU index 132
residue id #1/B:165 name TRP index 133
residue id #1/B:166 name ILE index 134
residue id #1/B:167 name ILE index 135
residue id #1/B:168 name THR index 136
residue id #1/B:169 name CYS index 137
residue id #1/B:170 name PRO index 138
residue id #1/B:171 name THR index 139
residue id #1/B:172 name LEU index 140
residue id #1/B:173 name LEU index 141
residue id #1/B:174 name TYR index 142
residue id #1/B:175 name TRP index 143
residue id #1/B:176 name CYS index 144
residue id #1/B:177 name GLY index 145
residue id #1/B:178 name LEU index 146
residue id #1/B:179 name ALA index 147
residue id #1/B:180 name SER index 148
residue id #1/B:181 name ARG index 149
residue id #1/B:183 name ASP index 151
residue id #1/B:184 name ARG index 152
residue id #1/B:185 name SER index 153
residue id #1/B:186 name SER index 154
residue id #1/B:187 name VAL index 155
residue id #1/B:188 name SER index 156
residue id #1/B:189 name ASP index 157
residue id #1/B:190 name ILE index 158
residue id #1/B:191 name ALA index 159
residue id #1/B:192 name THR index 160
residue id #1/B:193 name ALA index 161
residue id #1/B:194 name ASP index 162
residue id #1/B:195 name ALA index 163
residue id #1/B:196 name LEU index 164
residue id #1/B:197 name LEU index 165
residue id #1/B:198 name LEU index 166
residue id #1/B:199 name ALA index 167
residue id #1/B:200 name GLY index 168
residue id #1/B:201 name GLY index 169
residue id #1/B:202 name ALA index 170
residue id #1/B:203 name LEU index 171
residue id #1/B:204 name SER index 172
residue id #1/B:205 name SER index 173
residue id #1/B:208 name PRO index 176
residue id #1/B:209 name SER index 177
residue id #1/B:210 name TRP index 178
residue id #1/B:211 name PRO index 179
residue id #1/B:212 name ALA index 180
residue id #1/B:213 name PHE index 181
residue id #1/B:214 name PHE index 182
residue id #1/B:215 name VAL index 183
residue id #1/B:216 name PHE index 184
residue id #1/B:217 name ALA index 185
residue id #1/B:218 name GLY index 186
residue id #1/B:219 name SER index 187
residue id #1/B:220 name PHE index 188
residue id #1/B:221 name ALA index 189
residue id #1/B:222 name THR index 190
residue id #1/B:223 name TYR index 191
residue id #1/B:224 name ILE index 192
residue id #1/B:225 name TYR index 193
residue id #1/B:226 name VAL index 194
residue id #1/B:227 name MET index 195
residue id #1/B:228 name LEU index 196
residue id #1/B:229 name HIS index 197
residue id #1/B:230 name MET index 198
residue id #1/B:231 name TRP index 199
residue id #1/B:232 name GLY index 200
residue id #1/B:233 name MET index 201
residue id #1/B:234 name PHE index 202
residue id #1/B:235 name GLY index 203
residue id #1/B:236 name LYS index 204
residue id #1/B:237 name ALA index 205
residue id #1/B:238 name MET index 206
residue id #1/B:239 name GLN index 207
residue id #1/B:249 name PRO index 217
residue id #1/B:250 name ARG index 218
residue id #1/B:251 name HIS index 219
residue id #1/B:252 name ALA index 220
residue id #1/B:253 name LEU index 221
residue id #1/B:254 name HIS index 222
residue id #1/B:255 name LEU index 223
residue id #1/B:256 name LEU index 224
residue id #1/B:257 name ARG index 225
residue id #1/B:258 name CYS index 226
residue id #1/B:259 name GLU index 227
residue id #1/B:260 name ILE index 228
residue id #1/B:261 name VAL index 229
residue id #1/B:262 name MET index 230
residue id #1/B:263 name SER index 231
residue id #1/B:264 name TRP index 232
residue id #1/B:265 name SER index 233
residue id #1/B:266 name ILE index 234
residue id #1/B:267 name PHE index 235
residue id #1/B:268 name PRO index 236
residue id #1/B:269 name LEU index 237
residue id #1/B:270 name VAL index 238
residue id #1/B:271 name GLU index 239
residue id #1/B:272 name PHE index 240
residue id #1/B:273 name LEU index 241
residue id #1/B:274 name ARG index 242
residue id #1/B:275 name ARG index 243
residue id #1/B:276 name GLN index 244
residue id #1/B:280 name ASP index 248
residue id #1/B:281 name PHE index 249
residue id #1/B:282 name GLN index 250
residue id #1/B:283 name VAL index 251
residue id #1/B:284 name GLY index 252
residue id #1/B:285 name GLU index 253
residue id #1/B:286 name ALA index 254
residue id #1/B:287 name MET index 255
residue id #1/B:288 name ASN index 256
residue id #1/B:289 name CYS index 257
residue id #1/B:290 name VAL index 258
residue id #1/B:291 name ALA index 259
residue id #1/B:292 name ASP index 260
residue id #1/B:293 name TYR index 261
residue id #1/B:294 name ALA index 262
residue id #1/B:295 name ALA index 263
residue id #1/B:296 name LYS index 264
residue id #1/B:297 name VAL index 265
residue id #1/B:298 name GLY index 266
residue id #1/B:299 name LEU index 267
residue id #1/B:300 name ALA index 268
residue id #1/B:301 name MET index 269
residue id #1/B:302 name ILE index 270
residue id #1/B:303 name MET index 271
residue id #1/B:304 name VAL index 272
residue id #1/B:305 name ASN index 273
residue id #1/B:306 name CYS index 274
residue id #1/B:307 name ASN index 275
residue id #1/B:308 name LEU index 276
residue id #1/B:309 name GLU index 277
residue id #2/?:3 name ALA index 2
residue id #2/?:4 name THR index 3
residue id #2/?:5 name SER index 4
residue id #2/?:6 name ARG index 5
residue id #2/?:7 name ARG index 6
residue id #2/?:8 name PHE index 7
residue id #2/?:9 name GLY index 8
residue id #2/?:10 name VAL index 9
residue id #2/?:11 name LEU index 10
residue id #2/?:12 name LEU index 11
residue id #2/?:13 name TYR index 12
residue id #2/?:14 name LEU index 13
residue id #2/?:15 name LEU index 14
residue id #2/?:16 name ALA index 15
residue id #2/?:17 name SER index 16
residue id #2/?:18 name TYR index 17
residue id #2/?:19 name LEU index 18
residue id #2/?:20 name ILE index 19
residue id #2/?:21 name CYS index 20
residue id #2/?:22 name THR index 21
residue id #2/?:28 name PRO index 27
residue id #2/?:29 name GLU index 28
residue id #2/?:30 name LEU index 29
residue id #2/?:31 name THR index 30
residue id #2/?:32 name ALA index 31
residue id #2/?:33 name GLN index 32
residue id #2/?:34 name PHE index 33
residue id #2/?:35 name HIE index 34
residue id #2/?:36 name ALA index 35
residue id #2/?:37 name GLN index 36
residue id #2/?:40 name PRO index 39
residue id #2/?:41 name ASN index 40
residue id #2/?:42 name ALA index 41
residue id #2/?:43 name TYR index 42
residue id #2/?:44 name THR index 43
residue id #2/?:45 name TRP index 44
residue id #2/?:46 name PRO index 45
residue id #2/?:47 name MET index 46
residue id #2/?:48 name VAL index 47
residue id #2/?:49 name ALA index 48
residue id #2/?:50 name PHE index 49
residue id #2/?:51 name GLY index 50
residue id #2/?:52 name THR index 51
residue id #2/?:53 name ALA index 52
residue id #2/?:54 name PHE index 53
residue id #2/?:55 name GLY index 54
residue id #2/?:56 name LEU index 55
residue id #2/?:57 name ASN index 56
residue id #2/?:58 name PHE index 57
residue id #2/?:59 name ILE index 58
residue id #2/?:60 name THR index 59
residue id #2/?:61 name LEU index 60
residue id #2/?:62 name LEU index 61
residue id #2/?:67 name SER index 66
residue id #2/?:68 name ALA index 67
residue id #2/?:69 name LYS index 68
residue id #2/?:70 name PHE index 69
residue id #2/?:71 name GLN index 70
residue id #2/?:72 name LEU index 71
residue id #2/?:73 name ALA index 72
residue id #2/?:74 name LEU index 73
residue id #2/?:75 name LEU index 74
residue id #2/?:76 name ALA index 75
residue id #2/?:77 name CYS index 76
residue id #2/?:78 name TYR index 77
residue id #2/?:79 name ILE index 78
residue id #2/?:80 name ASN index 79
residue id #2/?:81 name PHE index 80
residue id #2/?:82 name LEU index 81
residue id #2/?:83 name ALA index 82
residue id #2/?:84 name GLY index 83
residue id #2/?:85 name PHE index 84
residue id #2/?:86 name SER index 85
residue id #2/?:87 name ASP index 86
residue id #2/?:88 name TYR index 87
residue id #2/?:89 name MET index 88
residue id #2/?:90 name SER index 89
residue id #2/?:91 name TRP index 90
residue id #2/?:108 name LEU index 107
residue id #2/?:109 name LEU index 108
residue id #2/?:110 name ARG index 109
residue id #2/?:111 name THR index 110
residue id #2/?:112 name VAL index 111
residue id #2/?:113 name MET index 112
residue id #2/?:114 name TRP index 113
residue id #2/?:115 name LEU index 114
residue id #2/?:116 name LEU index 115
residue id #2/?:117 name THR index 116
residue id #2/?:118 name THR index 117
residue id #2/?:119 name PRO index 118
residue id #2/?:120 name ALA index 119
residue id #2/?:121 name MET index 120
residue id #2/?:122 name VAL index 121
residue id #2/?:123 name TYR index 122
residue id #2/?:124 name LEU index 123
residue id #2/?:125 name LEU index 124
residue id #2/?:126 name SER index 125
residue id #2/?:127 name ILE index 126
residue id #2/?:128 name ILE index 127
residue id #2/?:133 name ARG index 132
residue id #2/?:134 name LEU index 133
residue id #2/?:135 name LYS index 134
residue id #2/?:136 name VAL index 135
residue id #2/?:137 name TYR index 136
residue id #2/?:138 name SER index 137
residue id #2/?:139 name VAL index 138
residue id #2/?:140 name MET index 139
residue id #2/?:141 name LEU index 140
residue id #2/?:142 name ALA index 141
residue id #2/?:143 name ASP index 142
residue id #2/?:144 name VAL index 143
residue id #2/?:145 name LEU index 144
residue id #2/?:146 name MET index 145
residue id #2/?:147 name ILE index 146
residue id #2/?:148 name THR index 147
residue id #2/?:149 name PHE index 148
residue id #2/?:150 name GLY index 149
residue id #2/?:151 name ILE index 150
residue id #2/?:152 name LEU index 151
residue id #2/?:153 name ALA index 152
residue id #2/?:154 name PHE index 153
residue id #2/?:159 name LYS index 158
residue id #2/?:160 name VAL index 159
residue id #2/?:161 name MET index 160
residue id #2/?:162 name SER index 161
residue id #2/?:163 name ILE index 162
residue id #2/?:164 name LEU index 163
residue id #2/?:165 name PHE index 164
residue id #2/?:166 name TYR index 165
residue id #2/?:167 name MET index 166
residue id #2/?:168 name VAL index 167
residue id #2/?:169 name ALA index 168
residue id #2/?:170 name TRP index 169
residue id #2/?:171 name CYS index 170
residue id #2/?:172 name LEU index 171
residue id #2/?:173 name PHE index 172
residue id #2/?:174 name ALA index 173
residue id #2/?:175 name TYR index 174
residue id #2/?:176 name VAL index 175
residue id #2/?:177 name VAL index 176
residue id #2/?:178 name HIE index 177
residue id #2/?:179 name SER index 178
residue id #2/?:180 name MET index 179
residue id #2/?:181 name TRP index 180
residue id #2/?:182 name SER index 181
residue id #2/?:183 name MET index 182
residue id #2/?:184 name PHE index 183
residue id #2/?:185 name HIE index 184
residue id #2/?:186 name ALA index 185
residue id #2/?:187 name SER index 186
residue id #2/?:188 name ILE index 187
residue id #2/?:189 name ALA index 188
residue id #2/?:190 name GLU index 189
residue id #2/?:194 name ASP index 193
residue id #2/?:195 name SER index 194
residue id #2/?:196 name SER index 195
residue id #2/?:197 name ARG index 196
residue id #2/?:198 name VAL index 197
residue id #2/?:199 name SER index 198
residue id #2/?:200 name LEU index 199
residue id #2/?:201 name GLU index 200
residue id #2/?:202 name VAL index 201
residue id #2/?:203 name LEU index 202
residue id #2/?:204 name ARG index 203
residue id #2/?:205 name LEU index 204
residue id #2/?:206 name PHE index 205
residue id #2/?:207 name ALA index 206
residue id #2/?:208 name VAL index 207
residue id #2/?:209 name GLY index 208
residue id #2/?:210 name LEU index 209
residue id #2/?:211 name TRP index 210
residue id #2/?:212 name PHE index 211
residue id #2/?:213 name THR index 212
residue id #2/?:214 name PHE index 213
residue id #2/?:215 name PRO index 214
residue id #2/?:216 name VAL index 215
residue id #2/?:217 name ILE index 216
residue id #2/?:218 name TRP index 217
residue id #2/?:219 name ILE index 218
residue id #2/?:220 name VAL index 219
residue id #2/?:221 name VAL index 220
residue id #2/?:222 name LYS index 221
residue id #2/?:228 name ILE index 227
residue id #2/?:229 name ARG index 228
residue id #2/?:230 name THR index 229
residue id #2/?:231 name GLU index 230
residue id #2/?:232 name GLU index 231
residue id #2/?:233 name TRP index 232
residue id #2/?:234 name THR index 233
residue id #2/?:235 name TRP index 234
residue id #2/?:236 name CYS index 235
residue id #2/?:237 name ALA index 236
residue id #2/?:238 name CYS index 237
residue id #2/?:239 name ASH index 238
residue id #2/?:240 name PHE index 239
residue id #2/?:241 name LEU index 240
residue id #2/?:242 name GLY index 241
residue id #2/?:243 name LYR index 242
residue id #2/?:244 name VAL index 243
residue id #2/?:245 name MET index 244
residue id #2/?:246 name PHE index 245
residue id #2/?:247 name SER index 246
residue id #2/?:248 name SER index 247
residue id #2/?:249 name SER index 248
residue id #2/?:250 name LEU index 249
residue id #2/?:251 name LEU index 250
residue id #2/?:252 name HIE index 251
> delete #2
[Repeated 3 time(s)]
> info residues sel
residue id /A:51 name GLU index 19
residue id /A:52 name VAL index 20
residue id /A:53 name GLN index 21
residue id /A:54 name TRP index 22
residue id /A:55 name GLN index 23
residue id /A:56 name GLY index 24
residue id /A:57 name ILE index 25
residue id /A:58 name PHE index 26
residue id /A:59 name MET index 27
residue id /A:60 name ILE index 28
residue id /A:61 name ILE index 29
residue id /A:62 name VAL index 30
residue id /A:63 name TRP index 31
residue id /A:64 name LEU index 32
residue id /A:65 name CYS index 33
residue id /A:66 name VAL index 34
residue id /A:67 name MET index 35
residue id /A:68 name GLY index 36
residue id /A:69 name SER index 37
residue id /A:70 name LEU index 38
residue id /A:71 name ILE index 39
residue id /A:72 name PHE index 40
residue id /A:73 name PHE index 41
residue id /A:75 name ASN index 43
residue id /A:76 name PRO index 44
residue id /A:77 name GLU index 45
residue id /A:78 name ALA index 46
residue id /A:79 name SER index 47
residue id /A:80 name ARG index 48
residue id /A:81 name ARG index 49
residue id /A:82 name VAL index 50
residue id /A:83 name PHE index 51
residue id /A:84 name ALA index 52
residue id /A:85 name LYS index 53
residue id /A:86 name PHE index 54
residue id /A:88 name HIS index 56
residue id /A:89 name LEU index 57
residue id /A:90 name GLN index 58
residue id /A:91 name SER index 59
residue id /A:92 name PHE index 60
residue id /A:93 name TYR index 61
residue id /A:94 name GLY index 62
residue id /A:95 name ALA index 63
residue id /A:96 name THR index 64
residue id /A:97 name SER index 65
residue id /A:98 name VAL index 66
residue id /A:99 name ALA index 67
residue id /A:100 name PHE index 68
residue id /A:101 name ALA index 69
residue id /A:102 name PHE index 70
residue id /A:103 name ALA index 71
residue id /A:104 name THR index 72
residue id /A:105 name GLY index 73
residue id /A:106 name LEU index 74
residue id /A:107 name ASP index 75
residue id /A:108 name ILE index 76
residue id /A:109 name LEU index 77
residue id /A:110 name ALA index 78
residue id /A:111 name TYR index 79
residue id /A:112 name VAL index 80
residue id /A:113 name ASN index 81
residue id /A:116 name SER index 84
residue id /A:117 name ASP index 85
residue id /A:118 name GLU index 86
residue id /A:119 name LYS index 87
residue id /A:120 name ARG index 88
residue id /A:121 name VAL index 89
residue id /A:122 name LEU index 90
residue id /A:123 name SER index 91
residue id /A:124 name GLY index 92
residue id /A:125 name ILE index 93
residue id /A:126 name LEU index 94
residue id /A:127 name ALA index 95
residue id /A:128 name TYR index 96
residue id /A:129 name VAL index 97
residue id /A:130 name ASP index 98
residue id /A:131 name GLY index 99
residue id /A:132 name VAL index 100
residue id /A:133 name ALA index 101
residue id /A:134 name CYS index 102
residue id /A:135 name ILE index 103
residue id /A:136 name SER index 104
residue id /A:137 name TYR index 105
residue id /A:138 name LEU index 106
residue id /A:139 name SER index 107
residue id /A:140 name MET index 108
residue id /A:141 name ALA index 109
residue id /A:142 name THR index 110
residue id /A:143 name LEU index 111
residue id /A:158 name TRP index 126
residue id /A:159 name LEU index 127
residue id /A:160 name MET index 128
residue id /A:161 name ARG index 129
residue id /A:162 name TYR index 130
residue id /A:163 name ALA index 131
residue id /A:164 name GLU index 132
residue id /A:165 name TRP index 133
residue id /A:166 name ILE index 134
residue id /A:167 name ILE index 135
residue id /A:168 name THR index 136
residue id /A:169 name CYS index 137
residue id /A:170 name PRO index 138
residue id /A:171 name THR index 139
residue id /A:172 name LEU index 140
residue id /A:173 name LEU index 141
residue id /A:174 name TYR index 142
residue id /A:175 name TRP index 143
residue id /A:176 name CYS index 144
residue id /A:177 name GLY index 145
residue id /A:178 name LEU index 146
residue id /A:179 name ALA index 147
residue id /A:180 name SER index 148
residue id /A:181 name ARG index 149
residue id /A:183 name ASP index 151
residue id /A:184 name ARG index 152
residue id /A:185 name SER index 153
residue id /A:186 name SER index 154
residue id /A:187 name VAL index 155
residue id /A:188 name SER index 156
residue id /A:189 name ASP index 157
residue id /A:190 name ILE index 158
residue id /A:191 name ALA index 159
residue id /A:192 name THR index 160
residue id /A:193 name ALA index 161
residue id /A:194 name ASP index 162
residue id /A:195 name ALA index 163
residue id /A:196 name LEU index 164
residue id /A:197 name LEU index 165
residue id /A:198 name LEU index 166
residue id /A:199 name ALA index 167
residue id /A:200 name GLY index 168
residue id /A:201 name GLY index 169
residue id /A:202 name ALA index 170
residue id /A:203 name LEU index 171
residue id /A:204 name SER index 172
residue id /A:205 name SER index 173
residue id /A:208 name PRO index 176
residue id /A:209 name SER index 177
residue id /A:210 name TRP index 178
residue id /A:211 name PRO index 179
residue id /A:212 name ALA index 180
residue id /A:213 name PHE index 181
residue id /A:214 name PHE index 182
residue id /A:215 name VAL index 183
residue id /A:216 name PHE index 184
residue id /A:217 name ALA index 185
residue id /A:218 name GLY index 186
residue id /A:219 name SER index 187
residue id /A:220 name PHE index 188
residue id /A:221 name ALA index 189
residue id /A:222 name THR index 190
residue id /A:223 name TYR index 191
residue id /A:224 name ILE index 192
residue id /A:225 name TYR index 193
residue id /A:226 name VAL index 194
residue id /A:227 name MET index 195
residue id /A:228 name LEU index 196
residue id /A:229 name HIS index 197
residue id /A:230 name MET index 198
residue id /A:231 name TRP index 199
residue id /A:232 name GLY index 200
residue id /A:233 name MET index 201
residue id /A:234 name PHE index 202
residue id /A:235 name GLY index 203
residue id /A:236 name LYS index 204
residue id /A:237 name ALA index 205
residue id /A:238 name MET index 206
residue id /A:239 name GLN index 207
residue id /A:249 name PRO index 217
residue id /A:250 name ARG index 218
residue id /A:251 name HIS index 219
residue id /A:252 name ALA index 220
residue id /A:253 name LEU index 221
residue id /A:254 name HIS index 222
residue id /A:255 name LEU index 223
residue id /A:256 name LEU index 224
residue id /A:257 name ARG index 225
residue id /A:258 name CYS index 226
residue id /A:259 name GLU index 227
residue id /A:260 name ILE index 228
residue id /A:261 name VAL index 229
residue id /A:262 name MET index 230
residue id /A:263 name SER index 231
residue id /A:264 name TRP index 232
residue id /A:265 name SER index 233
residue id /A:266 name ILE index 234
residue id /A:267 name PHE index 235
residue id /A:268 name PRO index 236
residue id /A:269 name LEU index 237
residue id /A:270 name VAL index 238
residue id /A:271 name GLU index 239
residue id /A:272 name PHE index 240
residue id /A:273 name LEU index 241
residue id /A:274 name ARG index 242
residue id /A:275 name ARG index 243
residue id /A:276 name GLN index 244
residue id /A:280 name ASP index 248
residue id /A:281 name PHE index 249
residue id /A:282 name GLN index 250
residue id /A:283 name VAL index 251
residue id /A:284 name GLY index 252
residue id /A:285 name GLU index 253
residue id /A:286 name ALA index 254
residue id /A:287 name MET index 255
residue id /A:288 name ASN index 256
residue id /A:289 name CYS index 257
residue id /A:290 name VAL index 258
residue id /A:291 name ALA index 259
residue id /A:292 name ASP index 260
residue id /A:293 name TYR index 261
residue id /A:294 name ALA index 262
residue id /A:295 name ALA index 263
residue id /A:296 name LYS index 264
residue id /A:297 name VAL index 265
residue id /A:298 name GLY index 266
residue id /A:299 name LEU index 267
residue id /A:300 name ALA index 268
residue id /A:301 name MET index 269
residue id /A:302 name ILE index 270
residue id /A:303 name MET index 271
residue id /A:304 name VAL index 272
residue id /A:305 name ASN index 273
residue id /A:306 name CYS index 274
residue id /A:307 name ASN index 275
residue id /A:308 name LEU index 276
residue id /A:309 name GLU index 277
residue id /A:310 name GLN index 278
residue id /B:48 name SER index 16
residue id /B:49 name THR index 17
residue id /B:50 name LYS index 18
residue id /B:51 name GLU index 19
residue id /B:52 name VAL index 20
residue id /B:53 name GLN index 21
residue id /B:54 name TRP index 22
residue id /B:55 name GLN index 23
residue id /B:56 name GLY index 24
residue id /B:57 name ILE index 25
residue id /B:58 name PHE index 26
residue id /B:59 name MET index 27
residue id /B:60 name ILE index 28
residue id /B:61 name ILE index 29
residue id /B:62 name VAL index 30
residue id /B:63 name TRP index 31
residue id /B:64 name LEU index 32
residue id /B:65 name CYS index 33
residue id /B:66 name VAL index 34
residue id /B:67 name MET index 35
residue id /B:68 name GLY index 36
residue id /B:69 name SER index 37
residue id /B:70 name LEU index 38
residue id /B:71 name ILE index 39
residue id /B:72 name PHE index 40
residue id /B:73 name PHE index 41
residue id /B:75 name ASN index 43
residue id /B:76 name PRO index 44
residue id /B:77 name GLU index 45
residue id /B:78 name ALA index 46
residue id /B:79 name SER index 47
residue id /B:80 name ARG index 48
residue id /B:81 name ARG index 49
residue id /B:82 name VAL index 50
residue id /B:83 name PHE index 51
residue id /B:84 name ALA index 52
residue id /B:85 name LYS index 53
residue id /B:86 name PHE index 54
residue id /B:88 name HIS index 56
residue id /B:89 name LEU index 57
residue id /B:90 name GLN index 58
residue id /B:91 name SER index 59
residue id /B:92 name PHE index 60
residue id /B:93 name TYR index 61
residue id /B:94 name GLY index 62
residue id /B:95 name ALA index 63
residue id /B:96 name THR index 64
residue id /B:97 name SER index 65
residue id /B:98 name VAL index 66
residue id /B:99 name ALA index 67
residue id /B:100 name PHE index 68
residue id /B:101 name ALA index 69
residue id /B:102 name PHE index 70
residue id /B:103 name ALA index 71
residue id /B:104 name THR index 72
residue id /B:105 name GLY index 73
residue id /B:106 name LEU index 74
residue id /B:107 name ASP index 75
residue id /B:108 name ILE index 76
residue id /B:109 name LEU index 77
residue id /B:110 name ALA index 78
residue id /B:111 name TYR index 79
residue id /B:112 name VAL index 80
residue id /B:113 name ASN index 81
residue id /B:116 name SER index 84
residue id /B:117 name ASP index 85
residue id /B:118 name GLU index 86
residue id /B:119 name LYS index 87
residue id /B:120 name ARG index 88
residue id /B:121 name VAL index 89
residue id /B:122 name LEU index 90
residue id /B:123 name SER index 91
residue id /B:124 name GLY index 92
residue id /B:125 name ILE index 93
residue id /B:126 name LEU index 94
residue id /B:127 name ALA index 95
residue id /B:128 name TYR index 96
residue id /B:129 name VAL index 97
residue id /B:130 name ASP index 98
residue id /B:131 name GLY index 99
residue id /B:132 name VAL index 100
residue id /B:133 name ALA index 101
residue id /B:134 name CYS index 102
residue id /B:135 name ILE index 103
residue id /B:136 name SER index 104
residue id /B:137 name TYR index 105
residue id /B:138 name LEU index 106
residue id /B:139 name SER index 107
residue id /B:140 name MET index 108
residue id /B:141 name ALA index 109
residue id /B:142 name THR index 110
residue id /B:143 name LEU index 111
residue id /B:158 name TRP index 126
residue id /B:159 name LEU index 127
residue id /B:160 name MET index 128
residue id /B:161 name ARG index 129
residue id /B:162 name TYR index 130
residue id /B:163 name ALA index 131
residue id /B:164 name GLU index 132
residue id /B:165 name TRP index 133
residue id /B:166 name ILE index 134
residue id /B:167 name ILE index 135
residue id /B:168 name THR index 136
residue id /B:169 name CYS index 137
residue id /B:170 name PRO index 138
residue id /B:171 name THR index 139
residue id /B:172 name LEU index 140
residue id /B:173 name LEU index 141
residue id /B:174 name TYR index 142
residue id /B:175 name TRP index 143
residue id /B:176 name CYS index 144
residue id /B:177 name GLY index 145
residue id /B:178 name LEU index 146
residue id /B:179 name ALA index 147
residue id /B:180 name SER index 148
residue id /B:181 name ARG index 149
residue id /B:183 name ASP index 151
residue id /B:184 name ARG index 152
residue id /B:185 name SER index 153
residue id /B:186 name SER index 154
residue id /B:187 name VAL index 155
residue id /B:188 name SER index 156
residue id /B:189 name ASP index 157
residue id /B:190 name ILE index 158
residue id /B:191 name ALA index 159
residue id /B:192 name THR index 160
residue id /B:193 name ALA index 161
residue id /B:194 name ASP index 162
residue id /B:195 name ALA index 163
residue id /B:196 name LEU index 164
residue id /B:197 name LEU index 165
residue id /B:198 name LEU index 166
residue id /B:199 name ALA index 167
residue id /B:200 name GLY index 168
residue id /B:201 name GLY index 169
residue id /B:202 name ALA index 170
residue id /B:203 name LEU index 171
residue id /B:204 name SER index 172
residue id /B:205 name SER index 173
residue id /B:208 name PRO index 176
residue id /B:209 name SER index 177
residue id /B:210 name TRP index 178
residue id /B:211 name PRO index 179
residue id /B:212 name ALA index 180
residue id /B:213 name PHE index 181
residue id /B:214 name PHE index 182
residue id /B:215 name VAL index 183
residue id /B:216 name PHE index 184
residue id /B:217 name ALA index 185
residue id /B:218 name GLY index 186
residue id /B:219 name SER index 187
residue id /B:220 name PHE index 188
residue id /B:221 name ALA index 189
residue id /B:222 name THR index 190
residue id /B:223 name TYR index 191
residue id /B:224 name ILE index 192
residue id /B:225 name TYR index 193
residue id /B:226 name VAL index 194
residue id /B:227 name MET index 195
residue id /B:228 name LEU index 196
residue id /B:229 name HIS index 197
residue id /B:230 name MET index 198
residue id /B:231 name TRP index 199
residue id /B:232 name GLY index 200
residue id /B:233 name MET index 201
residue id /B:234 name PHE index 202
residue id /B:235 name GLY index 203
residue id /B:236 name LYS index 204
residue id /B:237 name ALA index 205
residue id /B:238 name MET index 206
residue id /B:239 name GLN index 207
residue id /B:249 name PRO index 217
residue id /B:250 name ARG index 218
residue id /B:251 name HIS index 219
residue id /B:252 name ALA index 220
residue id /B:253 name LEU index 221
residue id /B:254 name HIS index 222
residue id /B:255 name LEU index 223
residue id /B:256 name LEU index 224
residue id /B:257 name ARG index 225
residue id /B:258 name CYS index 226
residue id /B:259 name GLU index 227
residue id /B:260 name ILE index 228
residue id /B:261 name VAL index 229
residue id /B:262 name MET index 230
residue id /B:263 name SER index 231
residue id /B:264 name TRP index 232
residue id /B:265 name SER index 233
residue id /B:266 name ILE index 234
residue id /B:267 name PHE index 235
residue id /B:268 name PRO index 236
residue id /B:269 name LEU index 237
residue id /B:270 name VAL index 238
residue id /B:271 name GLU index 239
residue id /B:272 name PHE index 240
residue id /B:273 name LEU index 241
residue id /B:274 name ARG index 242
residue id /B:275 name ARG index 243
residue id /B:276 name GLN index 244
residue id /B:280 name ASP index 248
residue id /B:281 name PHE index 249
residue id /B:282 name GLN index 250
residue id /B:283 name VAL index 251
residue id /B:284 name GLY index 252
residue id /B:285 name GLU index 253
residue id /B:286 name ALA index 254
residue id /B:287 name MET index 255
residue id /B:288 name ASN index 256
residue id /B:289 name CYS index 257
residue id /B:290 name VAL index 258
residue id /B:291 name ALA index 259
residue id /B:292 name ASP index 260
residue id /B:293 name TYR index 261
residue id /B:294 name ALA index 262
residue id /B:295 name ALA index 263
residue id /B:296 name LYS index 264
residue id /B:297 name VAL index 265
residue id /B:298 name GLY index 266
residue id /B:299 name LEU index 267
residue id /B:300 name ALA index 268
residue id /B:301 name MET index 269
residue id /B:302 name ILE index 270
residue id /B:303 name MET index 271
residue id /B:304 name VAL index 272
residue id /B:305 name ASN index 273
residue id /B:306 name CYS index 274
residue id /B:307 name ASN index 275
residue id /B:308 name LEU index 276
residue id /B:309 name GLU index 277
> select all
4402 atoms, 4492 bonds, 558 residues, 1 model selected
> info residues sel
residue id /A:49 name THR index 17
residue id /A:50 name LYS index 18
residue id /A:51 name GLU index 19
residue id /A:52 name VAL index 20
residue id /A:53 name GLN index 21
residue id /A:54 name TRP index 22
residue id /A:55 name GLN index 23
residue id /A:56 name GLY index 24
residue id /A:57 name ILE index 25
residue id /A:58 name PHE index 26
residue id /A:59 name MET index 27
residue id /A:60 name ILE index 28
residue id /A:61 name ILE index 29
residue id /A:62 name VAL index 30
residue id /A:63 name TRP index 31
residue id /A:64 name LEU index 32
residue id /A:65 name CYS index 33
residue id /A:66 name VAL index 34
residue id /A:67 name MET index 35
residue id /A:68 name GLY index 36
residue id /A:69 name SER index 37
residue id /A:70 name LEU index 38
residue id /A:71 name ILE index 39
residue id /A:72 name PHE index 40
residue id /A:73 name PHE index 41
residue id /A:74 name ALA index 42
residue id /A:75 name ASN index 43
residue id /A:76 name PRO index 44
residue id /A:77 name GLU index 45
residue id /A:78 name ALA index 46
residue id /A:79 name SER index 47
residue id /A:80 name ARG index 48
residue id /A:81 name ARG index 49
residue id /A:82 name VAL index 50
residue id /A:83 name PHE index 51
residue id /A:84 name ALA index 52
residue id /A:85 name LYS index 53
residue id /A:86 name PHE index 54
residue id /A:87 name SER index 55
residue id /A:88 name HIS index 56
residue id /A:89 name LEU index 57
residue id /A:90 name GLN index 58
residue id /A:91 name SER index 59
residue id /A:92 name PHE index 60
residue id /A:93 name TYR index 61
residue id /A:94 name GLY index 62
residue id /A:95 name ALA index 63
residue id /A:96 name THR index 64
residue id /A:97 name SER index 65
residue id /A:98 name VAL index 66
residue id /A:99 name ALA index 67
residue id /A:100 name PHE index 68
residue id /A:101 name ALA index 69
residue id /A:102 name PHE index 70
residue id /A:103 name ALA index 71
residue id /A:104 name THR index 72
residue id /A:105 name GLY index 73
residue id /A:106 name LEU index 74
residue id /A:107 name ASP index 75
residue id /A:108 name ILE index 76
residue id /A:109 name LEU index 77
residue id /A:110 name ALA index 78
residue id /A:111 name TYR index 79
residue id /A:112 name VAL index 80
residue id /A:113 name ASN index 81
residue id /A:114 name ALA index 82
residue id /A:115 name VAL index 83
residue id /A:116 name SER index 84
residue id /A:117 name ASP index 85
residue id /A:118 name GLU index 86
residue id /A:119 name LYS index 87
residue id /A:120 name ARG index 88
residue id /A:121 name VAL index 89
residue id /A:122 name LEU index 90
residue id /A:123 name SER index 91
residue id /A:124 name GLY index 92
residue id /A:125 name ILE index 93
residue id /A:126 name LEU index 94
residue id /A:127 name ALA index 95
residue id /A:128 name TYR index 96
residue id /A:129 name VAL index 97
residue id /A:130 name ASP index 98
residue id /A:131 name GLY index 99
residue id /A:132 name VAL index 100
residue id /A:133 name ALA index 101
residue id /A:134 name CYS index 102
residue id /A:135 name ILE index 103
residue id /A:136 name SER index 104
residue id /A:137 name TYR index 105
residue id /A:138 name LEU index 106
residue id /A:139 name SER index 107
residue id /A:140 name MET index 108
residue id /A:141 name ALA index 109
residue id /A:142 name THR index 110
residue id /A:143 name LEU index 111
residue id /A:144 name ASN index 112
residue id /A:145 name LEU index 113
residue id /A:146 name TYR index 114
residue id /A:147 name PHE index 115
residue id /A:148 name LEU index 116
residue id /A:149 name VAL index 117
residue id /A:150 name ASP index 118
residue id /A:151 name SER index 119
residue id /A:152 name THR index 120
residue id /A:153 name GLN index 121
residue id /A:154 name GLY index 122
residue id /A:155 name ASN index 123
residue id /A:156 name PRO index 124
residue id /A:157 name VAL index 125
residue id /A:158 name TRP index 126
residue id /A:159 name LEU index 127
residue id /A:160 name MET index 128
residue id /A:161 name ARG index 129
residue id /A:162 name TYR index 130
residue id /A:163 name ALA index 131
residue id /A:164 name GLU index 132
residue id /A:165 name TRP index 133
residue id /A:166 name ILE index 134
residue id /A:167 name ILE index 135
residue id /A:168 name THR index 136
residue id /A:169 name CYS index 137
residue id /A:170 name PRO index 138
residue id /A:171 name THR index 139
residue id /A:172 name LEU index 140
residue id /A:173 name LEU index 141
residue id /A:174 name TYR index 142
residue id /A:175 name TRP index 143
residue id /A:176 name CYS index 144
residue id /A:177 name GLY index 145
residue id /A:178 name LEU index 146
residue id /A:179 name ALA index 147
residue id /A:180 name SER index 148
residue id /A:181 name ARG index 149
residue id /A:182 name ALA index 150
residue id /A:183 name ASP index 151
residue id /A:184 name ARG index 152
residue id /A:185 name SER index 153
residue id /A:186 name SER index 154
residue id /A:187 name VAL index 155
residue id /A:188 name SER index 156
residue id /A:189 name ASP index 157
residue id /A:190 name ILE index 158
residue id /A:191 name ALA index 159
residue id /A:192 name THR index 160
residue id /A:193 name ALA index 161
residue id /A:194 name ASP index 162
residue id /A:195 name ALA index 163
residue id /A:196 name LEU index 164
residue id /A:197 name LEU index 165
residue id /A:198 name LEU index 166
residue id /A:199 name ALA index 167
residue id /A:200 name GLY index 168
residue id /A:201 name GLY index 169
residue id /A:202 name ALA index 170
residue id /A:203 name LEU index 171
residue id /A:204 name SER index 172
residue id /A:205 name SER index 173
residue id /A:206 name ILE index 174
residue id /A:207 name LEU index 175
residue id /A:208 name PRO index 176
residue id /A:209 name SER index 177
residue id /A:210 name TRP index 178
residue id /A:211 name PRO index 179
residue id /A:212 name ALA index 180
residue id /A:213 name PHE index 181
residue id /A:214 name PHE index 182
residue id /A:215 name VAL index 183
residue id /A:216 name PHE index 184
residue id /A:217 name ALA index 185
residue id /A:218 name GLY index 186
residue id /A:219 name SER index 187
residue id /A:220 name PHE index 188
residue id /A:221 name ALA index 189
residue id /A:222 name THR index 190
residue id /A:223 name TYR index 191
residue id /A:224 name ILE index 192
residue id /A:225 name TYR index 193
residue id /A:226 name VAL index 194
residue id /A:227 name MET index 195
residue id /A:228 name LEU index 196
residue id /A:229 name HIS index 197
residue id /A:230 name MET index 198
residue id /A:231 name TRP index 199
residue id /A:232 name GLY index 200
residue id /A:233 name MET index 201
residue id /A:234 name PHE index 202
residue id /A:235 name GLY index 203
residue id /A:236 name LYS index 204
residue id /A:237 name ALA index 205
residue id /A:238 name MET index 206
residue id /A:239 name GLN index 207
residue id /A:240 name PRO index 208
residue id /A:241 name ASP index 209
residue id /A:242 name PHE index 210
residue id /A:243 name GLN index 211
residue id /A:244 name PRO index 212
residue id /A:245 name PRO index 213
residue id /A:246 name PRO index 214
residue id /A:247 name PRO index 215
residue id /A:248 name LEU index 216
residue id /A:249 name PRO index 217
residue id /A:250 name ARG index 218
residue id /A:251 name HIS index 219
residue id /A:252 name ALA index 220
residue id /A:253 name LEU index 221
residue id /A:254 name HIS index 222
residue id /A:255 name LEU index 223
residue id /A:256 name LEU index 224
residue id /A:257 name ARG index 225
residue id /A:258 name CYS index 226
residue id /A:259 name GLU index 227
residue id /A:260 name ILE index 228
residue id /A:261 name VAL index 229
residue id /A:262 name MET index 230
residue id /A:263 name SER index 231
residue id /A:264 name TRP index 232
residue id /A:265 name SER index 233
residue id /A:266 name ILE index 234
residue id /A:267 name PHE index 235
residue id /A:268 name PRO index 236
residue id /A:269 name LEU index 237
residue id /A:270 name VAL index 238
residue id /A:271 name GLU index 239
residue id /A:272 name PHE index 240
residue id /A:273 name LEU index 241
residue id /A:274 name ARG index 242
residue id /A:275 name ARG index 243
residue id /A:276 name GLN index 244
residue id /A:277 name GLY index 245
residue id /A:278 name TYR index 246
residue id /A:279 name ILE index 247
residue id /A:280 name ASP index 248
residue id /A:281 name PHE index 249
residue id /A:282 name GLN index 250
residue id /A:283 name VAL index 251
residue id /A:284 name GLY index 252
residue id /A:285 name GLU index 253
residue id /A:286 name ALA index 254
residue id /A:287 name MET index 255
residue id /A:288 name ASN index 256
residue id /A:289 name CYS index 257
residue id /A:290 name VAL index 258
residue id /A:291 name ALA index 259
residue id /A:292 name ASP index 260
residue id /A:293 name TYR index 261
residue id /A:294 name ALA index 262
residue id /A:295 name ALA index 263
residue id /A:296 name LYS index 264
residue id /A:297 name VAL index 265
residue id /A:298 name GLY index 266
residue id /A:299 name LEU index 267
residue id /A:300 name ALA index 268
residue id /A:301 name MET index 269
residue id /A:302 name ILE index 270
residue id /A:303 name MET index 271
residue id /A:304 name VAL index 272
residue id /A:305 name ASN index 273
residue id /A:306 name CYS index 274
residue id /A:307 name ASN index 275
residue id /A:308 name LEU index 276
residue id /A:309 name GLU index 277
residue id /A:310 name GLN index 278
residue id /B:47 name ALA index 15
residue id /B:48 name SER index 16
residue id /B:49 name THR index 17
residue id /B:50 name LYS index 18
residue id /B:51 name GLU index 19
residue id /B:52 name VAL index 20
residue id /B:53 name GLN index 21
residue id /B:54 name TRP index 22
residue id /B:55 name GLN index 23
residue id /B:56 name GLY index 24
residue id /B:57 name ILE index 25
residue id /B:58 name PHE index 26
residue id /B:59 name MET index 27
residue id /B:60 name ILE index 28
residue id /B:61 name ILE index 29
residue id /B:62 name VAL index 30
residue id /B:63 name TRP index 31
residue id /B:64 name LEU index 32
residue id /B:65 name CYS index 33
residue id /B:66 name VAL index 34
residue id /B:67 name MET index 35
residue id /B:68 name GLY index 36
residue id /B:69 name SER index 37
residue id /B:70 name LEU index 38
residue id /B:71 name ILE index 39
residue id /B:72 name PHE index 40
residue id /B:73 name PHE index 41
residue id /B:74 name ALA index 42
residue id /B:75 name ASN index 43
residue id /B:76 name PRO index 44
residue id /B:77 name GLU index 45
residue id /B:78 name ALA index 46
residue id /B:79 name SER index 47
residue id /B:80 name ARG index 48
residue id /B:81 name ARG index 49
residue id /B:82 name VAL index 50
residue id /B:83 name PHE index 51
residue id /B:84 name ALA index 52
residue id /B:85 name LYS index 53
residue id /B:86 name PHE index 54
residue id /B:87 name SER index 55
residue id /B:88 name HIS index 56
residue id /B:89 name LEU index 57
residue id /B:90 name GLN index 58
residue id /B:91 name SER index 59
residue id /B:92 name PHE index 60
residue id /B:93 name TYR index 61
residue id /B:94 name GLY index 62
residue id /B:95 name ALA index 63
residue id /B:96 name THR index 64
residue id /B:97 name SER index 65
residue id /B:98 name VAL index 66
residue id /B:99 name ALA index 67
residue id /B:100 name PHE index 68
residue id /B:101 name ALA index 69
residue id /B:102 name PHE index 70
residue id /B:103 name ALA index 71
residue id /B:104 name THR index 72
residue id /B:105 name GLY index 73
residue id /B:106 name LEU index 74
residue id /B:107 name ASP index 75
residue id /B:108 name ILE index 76
residue id /B:109 name LEU index 77
residue id /B:110 name ALA index 78
residue id /B:111 name TYR index 79
residue id /B:112 name VAL index 80
residue id /B:113 name ASN index 81
residue id /B:114 name ALA index 82
residue id /B:115 name VAL index 83
residue id /B:116 name SER index 84
residue id /B:117 name ASP index 85
residue id /B:118 name GLU index 86
residue id /B:119 name LYS index 87
residue id /B:120 name ARG index 88
residue id /B:121 name VAL index 89
residue id /B:122 name LEU index 90
residue id /B:123 name SER index 91
residue id /B:124 name GLY index 92
residue id /B:125 name ILE index 93
residue id /B:126 name LEU index 94
residue id /B:127 name ALA index 95
residue id /B:128 name TYR index 96
residue id /B:129 name VAL index 97
residue id /B:130 name ASP index 98
residue id /B:131 name GLY index 99
residue id /B:132 name VAL index 100
residue id /B:133 name ALA index 101
residue id /B:134 name CYS index 102
residue id /B:135 name ILE index 103
residue id /B:136 name SER index 104
residue id /B:137 name TYR index 105
residue id /B:138 name LEU index 106
residue id /B:139 name SER index 107
residue id /B:140 name MET index 108
residue id /B:141 name ALA index 109
residue id /B:142 name THR index 110
residue id /B:143 name LEU index 111
residue id /B:144 name ASN index 112
residue id /B:145 name LEU index 113
residue id /B:146 name TYR index 114
residue id /B:147 name PHE index 115
residue id /B:148 name LEU index 116
residue id /B:149 name VAL index 117
residue id /B:150 name ASP index 118
residue id /B:151 name SER index 119
residue id /B:152 name THR index 120
residue id /B:153 name GLN index 121
residue id /B:154 name GLY index 122
residue id /B:155 name ASN index 123
residue id /B:156 name PRO index 124
residue id /B:157 name VAL index 125
residue id /B:158 name TRP index 126
residue id /B:159 name LEU index 127
residue id /B:160 name MET index 128
residue id /B:161 name ARG index 129
residue id /B:162 name TYR index 130
residue id /B:163 name ALA index 131
residue id /B:164 name GLU index 132
residue id /B:165 name TRP index 133
residue id /B:166 name ILE index 134
residue id /B:167 name ILE index 135
residue id /B:168 name THR index 136
residue id /B:169 name CYS index 137
residue id /B:170 name PRO index 138
residue id /B:171 name THR index 139
residue id /B:172 name LEU index 140
residue id /B:173 name LEU index 141
residue id /B:174 name TYR index 142
residue id /B:175 name TRP index 143
residue id /B:176 name CYS index 144
residue id /B:177 name GLY index 145
residue id /B:178 name LEU index 146
residue id /B:179 name ALA index 147
residue id /B:180 name SER index 148
residue id /B:181 name ARG index 149
residue id /B:182 name ALA index 150
residue id /B:183 name ASP index 151
residue id /B:184 name ARG index 152
residue id /B:185 name SER index 153
residue id /B:186 name SER index 154
residue id /B:187 name VAL index 155
residue id /B:188 name SER index 156
residue id /B:189 name ASP index 157
residue id /B:190 name ILE index 158
residue id /B:191 name ALA index 159
residue id /B:192 name THR index 160
residue id /B:193 name ALA index 161
residue id /B:194 name ASP index 162
residue id /B:195 name ALA index 163
residue id /B:196 name LEU index 164
residue id /B:197 name LEU index 165
residue id /B:198 name LEU index 166
residue id /B:199 name ALA index 167
residue id /B:200 name GLY index 168
residue id /B:201 name GLY index 169
residue id /B:202 name ALA index 170
residue id /B:203 name LEU index 171
residue id /B:204 name SER index 172
residue id /B:205 name SER index 173
residue id /B:206 name ILE index 174
residue id /B:207 name LEU index 175
residue id /B:208 name PRO index 176
residue id /B:209 name SER index 177
residue id /B:210 name TRP index 178
residue id /B:211 name PRO index 179
residue id /B:212 name ALA index 180
residue id /B:213 name PHE index 181
residue id /B:214 name PHE index 182
residue id /B:215 name VAL index 183
residue id /B:216 name PHE index 184
residue id /B:217 name ALA index 185
residue id /B:218 name GLY index 186
residue id /B:219 name SER index 187
residue id /B:220 name PHE index 188
residue id /B:221 name ALA index 189
residue id /B:222 name THR index 190
residue id /B:223 name TYR index 191
residue id /B:224 name ILE index 192
residue id /B:225 name TYR index 193
residue id /B:226 name VAL index 194
residue id /B:227 name MET index 195
residue id /B:228 name LEU index 196
residue id /B:229 name HIS index 197
residue id /B:230 name MET index 198
residue id /B:231 name TRP index 199
residue id /B:232 name GLY index 200
residue id /B:233 name MET index 201
residue id /B:234 name PHE index 202
residue id /B:235 name GLY index 203
residue id /B:236 name LYS index 204
residue id /B:237 name ALA index 205
residue id /B:238 name MET index 206
residue id /B:239 name GLN index 207
residue id /B:240 name PRO index 208
residue id /B:241 name ASP index 209
residue id /B:242 name PHE index 210
residue id /B:243 name GLN index 211
residue id /B:244 name PRO index 212
residue id /B:245 name PRO index 213
residue id /B:246 name PRO index 214
residue id /B:247 name PRO index 215
residue id /B:248 name LEU index 216
residue id /B:249 name PRO index 217
residue id /B:250 name ARG index 218
residue id /B:251 name HIS index 219
residue id /B:252 name ALA index 220
residue id /B:253 name LEU index 221
residue id /B:254 name HIS index 222
residue id /B:255 name LEU index 223
residue id /B:256 name LEU index 224
residue id /B:257 name ARG index 225
residue id /B:258 name CYS index 226
residue id /B:259 name GLU index 227
residue id /B:260 name ILE index 228
residue id /B:261 name VAL index 229
residue id /B:262 name MET index 230
residue id /B:263 name SER index 231
residue id /B:264 name TRP index 232
residue id /B:265 name SER index 233
residue id /B:266 name ILE index 234
residue id /B:267 name PHE index 235
residue id /B:268 name PRO index 236
residue id /B:269 name LEU index 237
residue id /B:270 name VAL index 238
residue id /B:271 name GLU index 239
residue id /B:272 name PHE index 240
residue id /B:273 name LEU index 241
residue id /B:274 name ARG index 242
residue id /B:275 name ARG index 243
residue id /B:276 name GLN index 244
residue id /B:277 name GLY index 245
residue id /B:278 name TYR index 246
residue id /B:279 name ILE index 247
residue id /B:280 name ASP index 248
residue id /B:281 name PHE index 249
residue id /B:282 name GLN index 250
residue id /B:283 name VAL index 251
residue id /B:284 name GLY index 252
residue id /B:285 name GLU index 253
residue id /B:286 name ALA index 254
residue id /B:287 name MET index 255
residue id /B:288 name ASN index 256
residue id /B:289 name CYS index 257
residue id /B:290 name VAL index 258
residue id /B:291 name ALA index 259
residue id /B:292 name ASP index 260
residue id /B:293 name TYR index 261
residue id /B:294 name ALA index 262
residue id /B:295 name ALA index 263
residue id /B:296 name LYS index 264
residue id /B:297 name VAL index 265
residue id /B:298 name GLY index 266
residue id /B:299 name LEU index 267
residue id /B:300 name ALA index 268
residue id /B:301 name MET index 269
residue id /B:302 name ILE index 270
residue id /B:303 name MET index 271
residue id /B:304 name VAL index 272
residue id /B:305 name ASN index 273
residue id /B:306 name CYS index 274
residue id /B:307 name ASN index 275
residue id /B:308 name LEU index 276
residue id /B:309 name GLU index 277
residue id /B:310 name GLN index 278
residue id /A:401 name RET
residue id /A:402 name OLC
residue id /A:403 name OLC
residue id /A:404 name OLC
residue id /A:405 name OLC
residue id /A:406 name OLC
residue id /A:407 name OLC
residue id /A:408 name OLC
residue id /B:401 name RET
residue id /B:402 name OLC
residue id /B:403 name OLC
residue id /B:404 name OLC
residue id /B:405 name OLC
residue id /B:406 name OLC
residue id /B:407 name OLC
residue id /B:408 name OLC
residue id /A:501 name HOH
residue id /A:502 name HOH
residue id /A:503 name HOH
residue id /A:504 name HOH
residue id /A:505 name HOH
residue id /A:506 name HOH
residue id /A:507 name HOH
residue id /B:501 name HOH
residue id /B:502 name HOH
residue id /B:503 name HOH
residue id /B:504 name HOH
residue id /B:505 name HOH
residue id /B:506 name HOH
residue id /B:507 name HOH
residue id /B:508 name HOH
residue id /B:509 name HOH
> select /A:310
9 atoms, 8 bonds, 1 residue, 1 model selected
> select /B:47,310
14 atoms, 12 bonds, 2 residues, 1 model selected
> info residues sel
residue id /B:47 name ALA index 15
residue id /B:310 name GLN index 278
> sequence identity aligned.fasta
Missing or invalid "src1" argument: Expected alignment-id or [alignment-
id]:sequence-name-or-number
> open C:/Users/עופר/Dropbox/LAB_staff/HKR/alignment/FULL-SEQ-
> alignment_tcoffee-all-files-252b8f0a/full_aligned.fasta
Summary of feedback from opening
C:/Users/עופר/Dropbox/LAB_staff/HKR/alignment/FULL-SEQ-alignment_tcoffee-all-
files-252b8f0a/full_aligned.fasta
---
notes | Alignment identifier is full_aligned.fasta
Associated 7cj3_Rho-PDE.pdb chain A to 7CJ3_1|Chains A,
B|Phosphodiesterase|Salpingoeca rosetta (strain ATCC 50818 / BSB-021) (946362)
_P_ 7d7pA with 7 mismatches
Associated 7cj3_Rho-PDE.pdb chain B to 7CJ3_1|Chains A,
B|Phosphodiesterase|Salpingoeca rosetta (strain ATCC 50818 / BSB-021) (946362)
_P_ 7d7pA with 7 mismatches
Showing conservation header ("seq_conservation" residue attribute) for
alignment full_aligned.fasta
Opened 2 sequences from full_aligned.fasta
QDockWidget failed to find relevant screen info. screenFrom:
QScreen(0x27cbe8ea020, name="\\\\\\\\.\\\DISPLAY2") screenTo:
QScreen(0x27cbe8ea020, name="\\\\\\\\.\\\DISPLAY2") wdgScreen:
QScreen(0x27cbe8ea020, name="\\\\\\\\.\\\DISPLAY2") orgWdgScreen QScreen(0x0)
[Repeated 189 time(s)]
QWindowsWindow::setGeometry: Unable to set geometry 581x493+1413-235 (frame:
603x549+1402-280) on QWidgetWindow/"QDockWidgetClassWindow" on
"\\\\.\DISPLAY1". Resulting geometry: 575x476+1416-221 (frame:
597x532+1405-266) margins: 11, 45, 11, 11 minimum size: 78x39 maximum size:
524287x524287 MINMAXINFO(maxSize=POINT(x=0, y=0), maxpos=POINT(x=0, y=0),
maxtrack=POINT(x=786453, y=786487), mintrack=POINT(x=139, y=115)))
QDockWidget failed to find relevant screen info. screenFrom:
QScreen(0x27cbe8ea020, name="\\\\\\\\.\\\DISPLAY2") screenTo:
QScreen(0x27cbe8ea020, name="\\\\\\\\.\\\DISPLAY2") wdgScreen:
QScreen(0x27cbe8e9d00, name="\\\\\\\\.\\\DISPLAY1") orgWdgScreen QScreen(0x0)
QWindowsWindow::setGeometry: Unable to set geometry 383x317+1411-227 (frame:
399x356+1403-258) on QWidgetWindow/"QDockWidgetClassWindow" on
"\\\\.\DISPLAY2". Resulting geometry: 389x334+1408-241 (frame:
405x373+1400-272) margins: 8, 31, 8, 8 minimum size: 78x39 maximum size:
524287x524287 MINMAXINFO(maxSize=POINT(x=0, y=0), maxpos=POINT(x=0, y=0),
maxtrack=POINT(x=524303, y=524326), mintrack=POINT(x=94, y=78)))
QDockWidget failed to find relevant screen info. screenFrom:
QScreen(0x27cbe8ea020, name="\\\\\\\\.\\\DISPLAY2") screenTo:
QScreen(0x27cbe8ea020, name="\\\\\\\\.\\\DISPLAY2") wdgScreen:
QScreen(0x27cbe8ea020, name="\\\\\\\\.\\\DISPLAY2") orgWdgScreen QScreen(0x0)
[Repeated 43 time(s)]
QWindowsWindow::setGeometry: Unable to set geometry 872x330+494-147 (frame:
894x386+483-192) on QWidgetWindow/"QDockWidgetClassWindow" on
"\\\\.\DISPLAY1". Resulting geometry: 866x313+497-133 (frame: 888x369+486-178)
margins: 11, 45, 11, 11 minimum size: 78x39 maximum size: 524287x524287
MINMAXINFO(maxSize=POINT(x=0, y=0), maxpos=POINT(x=0, y=0),
maxtrack=POINT(x=786453, y=786487), mintrack=POINT(x=139, y=115)))
QDockWidget failed to find relevant screen info. screenFrom:
QScreen(0x27cbe8ea020, name="\\\\\\\\.\\\DISPLAY2") screenTo:
QScreen(0x27cbe8ea020, name="\\\\\\\\.\\\DISPLAY2") wdgScreen:
QScreen(0x27cbe8e9d00, name="\\\\\\\\.\\\DISPLAY1") orgWdgScreen QScreen(0x0)
QDockWidget failed to find relevant screen info. screenFrom:
QScreen(0x27cbe8ea020, name="\\\\\\\\.\\\DISPLAY2") screenTo:
QScreen(0x27cbe8e9d00, name="\\\\\\\\.\\\DISPLAY1") wdgScreen:
QScreen(0x27cbe8e9d00, name="\\\\\\\\.\\\DISPLAY1") orgWdgScreen QScreen(0x0)
[Repeated 26 time(s)]
QDockWidget failed to find relevant screen info. screenFrom:
QScreen(0x27cbe8ea020, name="\\\\\\\\.\\\DISPLAY2") screenTo:
QScreen(0x27cbe8ea020, name="\\\\\\\\.\\\DISPLAY2") wdgScreen:
QScreen(0x27cbe8ea020, name="\\\\\\\\.\\\DISPLAY2") orgWdgScreen QScreen(0x0)
[Repeated 4 time(s)]
QWindowsWindow::setGeometry: Unable to set geometry 581x220+1136-88 (frame:
603x276+1125-133) on QWidgetWindow/"QDockWidgetClassWindow" on
"\\\\.\DISPLAY1". Resulting geometry: 575x203+1139-74 (frame:
597x259+1128-119) margins: 11, 45, 11, 11 minimum size: 78x39 maximum size:
524287x524287 MINMAXINFO(maxSize=POINT(x=0, y=0), maxpos=POINT(x=0, y=0),
maxtrack=POINT(x=786453, y=786487), mintrack=POINT(x=139, y=115)))
QDockWidget failed to find relevant screen info. screenFrom:
QScreen(0x27cbe8ea020, name="\\\\\\\\.\\\DISPLAY2") screenTo:
QScreen(0x27cbe8ea020, name="\\\\\\\\.\\\DISPLAY2") wdgScreen:
QScreen(0x27cbe8e9d00, name="\\\\\\\\.\\\DISPLAY1") orgWdgScreen QScreen(0x0)
QWindowsWindow::setGeometry: Unable to set geometry 383x135+1109-58 (frame:
399x174+1101-89) on QWidgetWindow/"QDockWidgetClassWindow" on
"\\\\.\DISPLAY2". Resulting geometry: 389x152+1106-72 (frame:
405x191+1098-103) margins: 8, 31, 8, 8 minimum size: 78x39 maximum size:
524287x524287 MINMAXINFO(maxSize=POINT(x=0, y=0), maxpos=POINT(x=0, y=0),
maxtrack=POINT(x=524303, y=524326), mintrack=POINT(x=94, y=78)))
QDockWidget failed to find relevant screen info. screenFrom:
QScreen(0x27cbe8ea020, name="\\\\\\\\.\\\DISPLAY2") screenTo:
QScreen(0x27cbe8e9d00, name="\\\\\\\\.\\\DISPLAY1") wdgScreen:
QScreen(0x27cbe8ea020, name="\\\\\\\\.\\\DISPLAY2") orgWdgScreen QScreen(0x0)
QWindowsWindow::setGeometry: Unable to set geometry 584x228+924+119 (frame:
606x284+913+74) on QWidgetWindow/"QDockWidgetClassWindow" on "\\\\.\DISPLAY1".
Resulting geometry: 578x211+927+133 (frame: 600x267+916+88) margins: 11, 45,
11, 11 minimum size: 78x39 maximum size: 524287x524287
MINMAXINFO(maxSize=POINT(x=0, y=0), maxpos=POINT(x=0, y=0),
maxtrack=POINT(x=786453, y=786487), mintrack=POINT(x=139, y=115)))
QDockWidget failed to find relevant screen info. screenFrom:
QScreen(0x27cbe8ea020, name="\\\\\\\\.\\\DISPLAY2") screenTo:
QScreen(0x27cbe8e9d00, name="\\\\\\\\.\\\DISPLAY1") wdgScreen:
QScreen(0x27cbe8e9d00, name="\\\\\\\\.\\\DISPLAY1") orgWdgScreen QScreen(0x0)
[Repeated 23 time(s)]
> select /A:49-72/B:47-72
385 atoms, 395 bonds, 50 residues, 1 model selected
> select /A:49-194/B:47-194
2249 atoms, 2307 bonds, 294 residues, 1 model selected
> select clear
> select /A-B:116-141
366 atoms, 368 bonds, 52 residues, 1 model selected
> select /A-B:261-262
30 atoms, 28 bonds, 4 residues, 1 model selected
> select /A:49-262/B:47-262
3297 atoms, 3400 bonds, 430 residues, 1 model selected
QDockWidget failed to find relevant screen info. screenFrom:
QScreen(0x27cbe8ea020, name="\\\\\\\\.\\\DISPLAY2") screenTo:
QScreen(0x27cbe8ea020, name="\\\\\\\\.\\\DISPLAY2") wdgScreen:
QScreen(0x27cbe8ea020, name="\\\\\\\\.\\\DISPLAY2") orgWdgScreen QScreen(0x0)
[Repeated 64 time(s)]
> sequence identity aligned.fasta
Missing or invalid "src1" argument: Expected alignment-id or [alignment-
id]:sequence-name-or-number
> sequence identity aligned.fasta
Missing or invalid "src1" argument: Expected alignment-id or [alignment-
id]:sequence-name-or-number
> sequence identity full_aligned.fasta:1 full_aligned.fasta:2 denominator
> nongap
AAQ16277.3 HKR1 from [Chlamydomonas reinhardtii] vs. 7CJ3_1|Chains A,
B|Phosphodiesterase|Salpingoeca rosetta (strain ATCC 50818 / BSB-021) (946362)
_P_ 7d7pA: 25.46% identity
> sequence identity full_aligned.fasta:1 full_aligned.fasta:2 denominator
> nongap
AAQ16277.3 HKR1 from [Chlamydomonas reinhardtii] vs. 7CJ3_1|Chains A,
B|Phosphodiesterase|Salpingoeca rosetta (strain ATCC 50818 / BSB-021) (946362)
_P_ 7d7pA: 25.46% identity
> select
4402 atoms, 4492 bonds, 558 residues, 1 model selected
> sequence identity full_aligned.fasta:1 full_aligned.fasta:2
AAQ16277.3 HKR1 from [Chlamydomonas reinhardtii] vs. 7CJ3_1|Chains A,
B|Phosphodiesterase|Salpingoeca rosetta (strain ATCC 50818 / BSB-021) (946362)
_P_ 7d7pA: 21.73% identity
> sequence identity full_aligned.fasta:1 full_aligned.fasta:2 denominator
> longer
AAQ16277.3 HKR1 from [Chlamydomonas reinhardtii] vs. 7CJ3_1|Chains A,
B|Phosphodiesterase|Salpingoeca rosetta (strain ATCC 50818 / BSB-021) (946362)
_P_ 7d7pA: 10.96% identity
> sequence identity full_aligned.fasta:2 full_aligned.fasta:2 denominator
> longer
7CJ3_1|Chains A, B|Phosphodiesterase|Salpingoeca rosetta (strain ATCC 50818 /
BSB-021) (946362) _P_ 7d7pA vs. 7CJ3_1|Chains A,
B|Phosphodiesterase|Salpingoeca rosetta (strain ATCC 50818 / BSB-021) (946362)
_P_ 7d7pA: 100.00% identity
> sequence identity full_aligned.fasta:2 full_aligned.fasta:2 denominator
> longer
7CJ3_1|Chains A, B|Phosphodiesterase|Salpingoeca rosetta (strain ATCC 50818 /
BSB-021) (946362) _P_ 7d7pA vs. 7CJ3_1|Chains A,
B|Phosphodiesterase|Salpingoeca rosetta (strain ATCC 50818 / BSB-021) (946362)
_P_ 7d7pA: 100.00% identity
> select up
4402 atoms, 4492 bonds, 558 residues, 1 model selected
> sequence identity full_aligned.fasta:2 full_aligned.fasta:2 denominator
> longer
7CJ3_1|Chains A, B|Phosphodiesterase|Salpingoeca rosetta (strain ATCC 50818 /
BSB-021) (946362) _P_ 7d7pA vs. 7CJ3_1|Chains A,
B|Phosphodiesterase|Salpingoeca rosetta (strain ATCC 50818 / BSB-021) (946362)
_P_ 7d7pA: 100.00% identity
> sequence identity full_aligned.fasta:2 full_aligned.fasta:1 denominator
> shorter
7CJ3_1|Chains A, B|Phosphodiesterase|Salpingoeca rosetta (strain ATCC 50818 /
BSB-021) (946362) _P_ 7d7pA vs. AAQ16277.3 HKR1 from [Chlamydomonas
reinhardtii]: 21.73% identity
> sequence identity full_aligned.fasta:1 full_aligned.fasta:2 denominator
> shorter
AAQ16277.3 HKR1 from [Chlamydomonas reinhardtii] vs. 7CJ3_1|Chains A,
B|Phosphodiesterase|Salpingoeca rosetta (strain ATCC 50818 / BSB-021) (946362)
_P_ 7d7pA: 21.73% identity
> select /A:49/B:47-49
23 atoms, 21 bonds, 4 residues, 1 model selected
> select /A:49-50/B:47-50
33 atoms, 31 bonds, 6 residues, 1 model selected
> select clear
> select /A:49-194/B:47-194
2249 atoms, 2307 bonds, 294 residues, 1 model selected
> select /A-B:197-199
42 atoms, 40 bonds, 6 residues, 1 model selected
> select /A-B:197-208
154 atoms, 154 bonds, 24 residues, 1 model selected
Alignment identifier is 2
Alignment identifier is 3
> interfaces select & ~solvent
Missing or invalid "atoms" argument: invalid atoms specifier
Alignment identifier is 2
> log metadata #1
Metadata for 7cj3_Rho-PDE.pdb #1
---
Title | Crystal structure of the transmembrane domain of salpingoeca rosetta
rhodopsin phosphodiesterase
Citation | Structural insights INTO the mechanism of
rhodopsinphosphodiesterase. PMID: 33154353
Non-standard residues | OLC — (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate
(1-oleoyl-R-glycerol)
RET — retinal
Gene source | Salpingoeca rosetta (strain ATCC 50818 / BSB- 021)
Experimental method | X-ray diffraction
Resolution | 2.60Å
> log metadata #1
Metadata for 7cj3_Rho-PDE.pdb #1
---
Title | Crystal structure of the transmembrane domain of salpingoeca rosetta
rhodopsin phosphodiesterase
Citation | Structural insights INTO the mechanism of
rhodopsinphosphodiesterase. PMID: 33154353
Non-standard residues | OLC — (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate
(1-oleoyl-R-glycerol)
RET — retinal
Gene source | Salpingoeca rosetta (strain ATCC 50818 / BSB- 021)
Experimental method | X-ray diffraction
Resolution | 2.60Å
> open F2TZN0 fromDatabase uniprot
Summary of feedback from opening F2TZN0 fetched from uniprot
---
notes | Alignment identifier is F2TZN0
Associated 7cj3_Rho-PDE.pdb chain A to F2TZN0 with 7 mismatches
Associated 7cj3_Rho-PDE.pdb chain B to F2TZN0 with 7 mismatches
Opened UniProt F2TZN0
> select /A-B:306
12 atoms, 10 bonds, 2 residues, 1 model selected
> select /A-B:154-306
2382 atoms, 2461 bonds, 306 residues, 1 model selected
> ~select
Nothing selected
> ~select
Nothing selected
> ~select
Nothing selected
> ~select
Nothing selected
> select /A-B:52-72,92-113,125-147,159-178,213-234
1730 atoms, 1783 bonds, 216 residues, 1 model selected
TypeError: invalid result from TwoThreeStateCheckBox.nextCheckState()
TypeError: invalid result from TwoThreeStateCheckBox.nextCheckState()
See log for complete Python traceback.
TypeError: invalid result from TwoThreeStateCheckBox.nextCheckState()
TypeError: invalid result from TwoThreeStateCheckBox.nextCheckState()
See log for complete Python traceback.
TypeError: invalid result from TwoThreeStateCheckBox.nextCheckState()
TypeError: invalid result from TwoThreeStateCheckBox.nextCheckState()
See log for complete Python traceback.
TypeError: invalid result from TwoThreeStateCheckBox.nextCheckState()
TypeError: invalid result from TwoThreeStateCheckBox.nextCheckState()
See log for complete Python traceback.
TypeError: invalid result from TwoThreeStateCheckBox.nextCheckState()
TypeError: invalid result from TwoThreeStateCheckBox.nextCheckState()
See log for complete Python traceback.
TypeError: invalid result from TwoThreeStateCheckBox.nextCheckState()
TypeError: invalid result from TwoThreeStateCheckBox.nextCheckState()
See log for complete Python traceback.
OpenGL version: 3.3.0 NVIDIA 451.91
OpenGL renderer: GeForce MX150/PCIe/SSE2
OpenGL vendor: NVIDIA Corporation
Python: 3.9.11
Locale: he_IL.cp65001
Qt version: PyQt6 6.3.1, Qt 6.3.1
Qt runtime version: 6.3.2
Qt platform: windows
Manufacturer: ASUSTeK COMPUTER INC.
Model: UX331UN
OS: Microsoft Windows 10 Home (Build 19045)
Memory: 17,029,578,752
MaxProcessMemory: 137,438,953,344
CPU: 8 Intel(R) Core(TM) i7-8550U CPU @ 1.80GHz
OSLanguage: he-IL
Installed Packages:
alabaster: 0.7.12
appdirs: 1.4.4
argcomplete: 3.0.8
asttokens: 2.1.0
attrs: 23.1.0
Babel: 2.11.0
backcall: 0.2.0
basis-set-exchange: 0.9
blockdiag: 3.0.0
build: 0.8.0
certifi: 2022.9.24
cftime: 1.6.2
charset-normalizer: 2.1.1
ChimeraX-AddCharge: 1.4
ChimeraX-AddH: 2.2.1
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2.1
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.6
ChimeraX-AlphaFold: 1.0
ChimeraX-AltlocExplorer: 1.0.3
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.41.5
ChimeraX-AtomicLibrary: 8.0.3
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.3
ChimeraX-BasicActions: 1.1.2
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.1.2
ChimeraX-BondRot: 2.0.1
ChimeraX-BugReporter: 1.0.1
ChimeraX-BuildStructure: 2.7.1
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.2
ChimeraX-ButtonPanel: 1.0.1
ChimeraX-CageBuilder: 1.0.1
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.3.1
ChimeraX-ChangeChains: 1.0.2
ChimeraX-CheckWaters: 1.3
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.2.4
ChimeraX-ColorActions: 1.0.3
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.2
ChimeraX-CommandLine: 1.2.4
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0.1
ChimeraX-Core: 1.5
ChimeraX-CoreFormats: 1.1
ChimeraX-coulombic: 1.3.2
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0.1
ChimeraX-DataFormats: 1.2.2
ChimeraX-Dicom: 1.1
ChimeraX-DistMonitor: 1.3
ChimeraX-DockPrep: 1.0
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0.1
ChimeraX-FunctionKey: 1.0.1
ChimeraX-Geometry: 1.2
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1
ChimeraX-Hbonds: 2.4
ChimeraX-Help: 1.2.1
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ItemsInspection: 1.0.1
ChimeraX-Label: 1.1.7
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.5
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.2
ChimeraX-Map: 1.1.2
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0.1
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1.1
ChimeraX-Markers: 1.0.1
ChimeraX-Mask: 1.0.1
ChimeraX-MatchMaker: 2.0.9
ChimeraX-MDcrds: 2.6
ChimeraX-MedicalToolbar: 1.0.2
ChimeraX-Meeting: 1.0.1
ChimeraX-MLP: 1.1
ChimeraX-mmCIF: 2.8
ChimeraX-MMTF: 2.2
ChimeraX-Modeller: 1.5.6
ChimeraX-ModelPanel: 1.3.6
ChimeraX-ModelSeries: 1.0.1
ChimeraX-Mol2: 2.0
ChimeraX-Mole: 1.0
ChimeraX-Morph: 1.0.1
ChimeraX-MouseModes: 1.1.1
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0.3
ChimeraX-OpenCommand: 1.9.1
ChimeraX-PDB: 2.6.8
ChimeraX-PDBBio: 1.0
ChimeraX-PDBLibrary: 1.0.2
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0.1
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1
ChimeraX-PubChem: 2.1
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-RenumberResidues: 1.1
ChimeraX-ResidueFit: 1.0.1
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0.1
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5.1
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.7.2
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0.1
ChimeraX-Shortcuts: 1.1.1
ChimeraX-ShowSequences: 1.0.1
ChimeraX-SideView: 1.0.1
ChimeraX-Smiles: 2.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.10
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.1
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0.1
ChimeraX-SwapRes: 2.1.3
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.1.2
ChimeraX-ToolshedUtils: 1.2.1
ChimeraX-Tug: 1.0.1
ChimeraX-UI: 1.24.3
ChimeraX-uniprot: 2.2.1
ChimeraX-UnitCell: 1.0.1
ChimeraX-ViewDockX: 1.1.4
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0.1
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0.1
ChimeraX-WebServices: 1.1.0
ChimeraX-Zone: 1.0.1
colorama: 0.4.5
comtypes: 1.1.10
cxservices: 1.2
cycler: 0.11.0
Cython: 0.29.32
debugpy: 1.6.4
decorator: 5.1.1
docutils: 0.19
entrypoints: 0.4
executing: 1.2.0
filelock: 3.7.1
fonttools: 4.38.0
funcparserlib: 1.0.1
grako: 3.16.5
h5py: 3.7.0
html2text: 2020.1.16
idna: 3.4
ihm: 0.33
imagecodecs: 2022.7.31
imagesize: 1.4.1
importlib-metadata: 5.1.0
ipykernel: 6.15.3
ipython: 8.4.0
ipython-genutils: 0.2.0
jedi: 0.18.1
Jinja2: 3.1.2
jsonschema: 4.17.3
jupyter-client: 7.3.4
jupyter-core: 5.1.0
kiwisolver: 1.4.4
line-profiler: 3.5.1
lxml: 4.9.1
lz4: 4.0.2
MarkupSafe: 2.1.1
matplotlib: 3.5.2
matplotlib-inline: 0.1.6
msgpack: 1.0.4
nest-asyncio: 1.5.6
netCDF4: 1.6.0
networkx: 2.8.5
numexpr: 2.8.4
numpy: 1.23.1
openvr: 1.23.701
packaging: 21.3
ParmEd: 3.4.3
parso: 0.8.3
pep517: 0.13.0
pickleshare: 0.7.5
Pillow: 9.2.0
pip: 22.2.2
pkginfo: 1.8.3
platformdirs: 2.5.4
prompt-toolkit: 3.0.33
psutil: 5.9.1
pure-eval: 0.2.2
pycollada: 0.7.2
pydicom: 2.3.0
Pygments: 2.12.0
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 3.0.9
PyQt6-commercial: 6.3.1
PyQt6-Qt6: 6.3.2
PyQt6-sip: 13.4.0
PyQt6-WebEngine-commercial: 6.3.1
PyQt6-WebEngine-Qt6: 6.3.2
pyrsistent: 0.19.3
python-dateutil: 2.8.2
pytz: 2022.6
pywin32: 303
pyzmq: 24.0.1
qtconsole: 5.3.1
QtPy: 2.3.0
RandomWords: 0.4.0
regex: 2023.3.23
requests: 2.28.1
scipy: 1.9.0
Send2Trash: 1.8.0
SEQCROW: 1.7.3
setuptools: 65.1.1
sfftk-rw: 0.7.2
six: 1.16.0
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
Sphinx: 5.1.1
sphinx-autodoc-typehints: 1.19.1
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 2.0.0
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.5
stack-data: 0.6.2
tables: 3.7.0
tifffile: 2022.7.31
tinyarray: 1.2.4
tomli: 2.0.1
tornado: 6.2
traitlets: 5.3.0
urllib3: 1.26.13
wcwidth: 0.2.5
webcolors: 1.12
wheel: 0.37.1
wheel-filename: 1.4.1
WMI: 1.5.1
zipp: 3.11.0
Change History (2)
comment:1 by , 2 years ago
| Component: | Unassigned → Sequence |
|---|---|
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → accepted |
| Summary: | ChimeraX bug report submission → Sequence viewer: bad nextCheckState() return value |
comment:2 by , 2 years ago
| Resolution: | → fixed |
|---|---|
| Status: | accepted → closed |
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