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Opened 3 years ago
Closed 3 years ago
#8756 closed defect (not a bug)
Switching background color loses mouse wheel zoom
| Reported by: | Owned by: | Tom Goddard | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | UI | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: macOS-13.1-arm64-arm-64bit
ChimeraX Version: 1.6rc202303292224 (2023-03-29 22:24:14 UTC)
Description
When switching the background from black to white the zoom function is lost via the mouse scroll wheel.(Describe the actions that caused this problem to occur here)
Log:
Startup Messages
---
note | available bundle cache has not been initialized yet
UCSF ChimeraX version: 1.6rc202303292224 (2023-03-29)
© 2016-2023 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open 7CGO format mmcif fromDatabase pdb
7cgo title:
Cryo-EM structure of the flagellar motor-hook complex from Salmonella [more
info...]
Chain information for 7cgo #1
---
Chain | Description | UniProt
0 1 2 3 4 | Flagellar MS ring L2 |
5 6 7 8 9 | Flagellar MS ring L1 | FLIF_SALTY 311-331
A B C D E F G H I J K L M N O P Q R S T U V W X | Flagellar basal-body rod
protein FlgG | FLGG_SALTY 1-260
AA AB AC AD AE AF AG AH AI AJ AK AL AM AN AO AP AQ AR AS AT AU AV AW AX AY AZ
| Flagellar L-ring protein | FLGH_SALTY 1-232
BA BB BC BD BE BF BG BH BI BJ BK BL BM BN BO BP BQ BR BS BT BU BV BW BX BY BZ
| Flagellar P-ring protein | FLGI_SALTY 1-365
CA CB CC CD | Flagellar biosynthetic protein FliQ | FLIQ_SALTY 1-89
CE | Flagellar biosynthetic protein FliR | FLIR_SALTY 1-264
CF w x y z | Flagellar biosynthetic protein FliP | FLIP_SALTY 1-245
Ca Cb Cc Cd Ce Cf Cg Ch Ci Cj Ck Cl Cm Cn Co Cp Cq Cr Cs Ct Cu Cv Cw Cx Cy Cz
Da Db Dc Dd De Df Dg Dh Di Dj Dk Dl Dm Dn Do Dp Dq Dr Ds Dt Du Dv Dw Ea Eb Ec
Ed Ee Ef Eg Eh | Flagellar M-ring protein | FLIF_SALTY 1-560
DA DB DC DD DE DF DG DH DI DJ DK DL DM DN DO DP DQ DR DS DT DU DV DW DX DY DZ
EA EB EC ED EE EF EG | Flagellar hook protein FlgE | FLGE_SALTY 1-403
GA GB GC GD GE | FlgB-Dc loop |
GF GG GH GI GJ GK | FliE helix 1 |
a b c d e | Flagellar basal-body rod protein FlgF | FLGF_SALTY 1-251
f g h i j p | Flagellar basal-body rod protein FlgC | FLGC_SALTY 1-134
k l m n o | Flagellar basal body rod protein FlgB | FLGB_SALTY 1-138
q r s t u v | Flagellar hook-basal body complex protein FliE | FLIE_SALTY
1-104
> set bgColor white
> open 6YKM
Summary of feedback from opening 6YKM fetched from pdb
---
note | Fetching compressed mmCIF 6ykm from
http://files.rcsb.org/download/6ykm.cif
6ykm title:
Structure of C. jejuni MotAB [more info...]
Chain information for 6ykm #2
---
Chain | Description | UniProt
A B C D E | Chemotaxis protein MotA, putative | A0A0H3PAV1_CAMJJ 1-258
F G | Chemotaxis protein MotB, putative | A0A0H3PBX6_CAMJJ 1-247
> select add #2
10434 atoms, 10619 bonds, 1365 residues, 1 model selected
> ui mousemode right "translate selected models"
> view matrix models #2,1,0,0,402.33,0,1,0,-115.4,0,0,1,200.15
> view matrix models
> #2,0.72852,0.30731,0.61222,326.67,0.14431,0.80482,-0.57571,-43.535,-0.66965,0.50776,0.54198,262.47
> view matrix models
> #2,0.92446,0.1875,0.33199,351.75,0.18492,0.54098,-0.82046,9.2672,-0.33344,0.81987,0.46544,202.4
> view matrix models
> #2,0.89383,0.26749,0.35989,342.79,0.20232,0.47567,-0.85604,18.789,-0.40017,0.83797,0.37105,217.71
> view matrix models
> #2,0.89383,0.26749,0.35989,311.03,0.20232,0.47567,-0.85604,76.451,-0.40017,0.83797,0.37105,460.08
> hide #!1 models
> hide #2 models
> open /Users/prash_mbp/Desktop/MSC_ring_apply_ncs_97.pdb
Summary of feedback from opening
/Users/prash_mbp/Desktop/MSC_ring_apply_ncs_97.pdb
---
warnings | Ignored bad PDB record found on line 2315
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Duplicate atom serial number found: 1
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502 messages similar to the above omitted
Ignored bad PDB record found on line 221924
Duplicate atom serial number found: 6490
Duplicate atom serial number found: 6491
Duplicate atom serial number found: 6492
Duplicate atom serial number found: 6493
Duplicate atom serial number found: 6494
226 messages similar to the above omitted
Ignored bad PDB record found on line 222157
Duplicate atom serial number found: 1
Duplicate atom serial number found: 2
Duplicate atom serial number found: 3
Duplicate atom serial number found: 4
Duplicate atom serial number found: 5
2307 messages similar to the above omitted
Ignored bad PDB record found on line 224471
Duplicate atom serial number found: 2313
Duplicate atom serial number found: 2314
Duplicate atom serial number found: 2315
Duplicate atom serial number found: 2316
Duplicate atom serial number found: 2317
2480 messages similar to the above omitted
Ignored bad PDB record found on line 226958
Duplicate atom serial number found: 4798
Duplicate atom serial number found: 4799
Duplicate atom serial number found: 4800
Duplicate atom serial number found: 4801
Duplicate atom serial number found: 4802
608 messages similar to the above omitted
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Duplicate atom serial number found: 5411
Duplicate atom serial number found: 5412
Duplicate atom serial number found: 5413
Duplicate atom serial number found: 5414
Duplicate atom serial number found: 5415
567 messages similar to the above omitted
Ignored bad PDB record found on line 228147
Duplicate atom serial number found: 5983
Duplicate atom serial number found: 5984
Duplicate atom serial number found: 5985
Duplicate atom serial number found: 5986
Duplicate atom serial number found: 5987
502 messages similar to the above omitted
Ignored bad PDB record found on line 228656
Duplicate atom serial number found: 6490
Duplicate atom serial number found: 6491
Duplicate atom serial number found: 6492
Duplicate atom serial number found: 6493
Duplicate atom serial number found: 6494
226 messages similar to the above omitted
Ignored bad PDB record found on line 228889
Ignored bad PDB record found on line 228890
Chain information for MSC_ring_apply_ncs_97.pdb #3
---
Chain | Description
A BC BF DB DE FA FD FG HC HF I JB JE LA LD LG M NC NF PB PE RA RD RG S TC TF
VB VE XA XD Z ZC ZF | No description available
AA AD AG B CC CF EB EE G GA GD GG IC IF J KB KE MA MD MG OC OF QB QE SA SD SG
T UC UF WB WE YA YD | No description available
AB AE CA CD CG D EC EF GB GE IA ID IG KC KF L MB ME OA OD OG P QC QF SB SE UA
UD UG W WC WF YB YE | No description available
AC AF CB CE EA ED EG F GC GF H IB IE KA KD KG MC MF OB OE QA QD QG R SC SF UB
UE WA WD WG Y YC YF | No description available
BA BD BG C DC DF FB FE HA HD HG JC JF K LB LE N NA ND NG PC PF RB RE TA TD TG
V VC VF XB XE ZA ZD | No description available
BB BE DA DD DG E FC FF HB HE JA JD JG LC LF NB NE O PA PD PG Q RC RF TB TE VA
VD VG X XC XF ZB ZE | No description available
> set bgColor black
> lighting soft
> select add #3
238914 atoms, 241955 bonds, 31149 residues, 2 models selected
> select subtract #2
228480 atoms, 231336 bonds, 29784 residues, 1 model selected
> show #!1 models
> hide #!1 models
> show #!1 models
> view matrix models
> #3,0.51758,-0.84733,-0.11897,753.84,-0.84547,-0.52783,0.081113,1203.1,-0.13152,0.058601,-0.98958,1003.3
> view matrix models
> #3,0.51664,-0.85433,-0.056578,727.74,-0.85429,-0.51878,0.032693,1226.5,-0.057281,0.031443,-0.99786,982.65
> view matrix models
> #3,0.51306,-0.85827,-0.011723,709.91,-0.85834,-0.51307,-0.0026196,1242.7,-0.0037664,0.011406,-0.99993,966.12
> view matrix models
> #3,0.51306,-0.85827,-0.011723,502.66,-0.85834,-0.51307,-0.0026196,1108.5,-0.0037664,0.011406,-0.99993,1121
> view matrix models
> #3,0.51306,-0.85827,-0.011723,499.78,-0.85834,-0.51307,-0.0026196,1059.7,-0.0037664,0.011406,-0.99993,1125.3
> select add #2
238914 atoms, 241955 bonds, 31149 residues, 2 models selected
> select subtract #3
10434 atoms, 10619 bonds, 1365 residues, 1 model selected
> show #2 models
> view matrix models
> #2,0.89383,0.26749,0.35989,154.27,0.20232,0.47567,-0.85604,634.9,-0.40017,0.83797,0.37105,440.35
> view matrix models
> #2,0.89383,0.26749,0.35989,151.71,0.20232,0.47567,-0.85604,584.48,-0.40017,0.83797,0.37105,434.61
> select add #3
238914 atoms, 241955 bonds, 31149 residues, 2 models selected
> select subtract #2
228480 atoms, 231336 bonds, 29784 residues, 1 model selected
> view matrix models
> #3,0.51306,-0.85827,-0.011723,499.88,-0.85834,-0.51307,-0.0026196,1047.3,-0.0037664,0.011406,-0.99993,1122.7
> view matrix models
> #3,0.51306,-0.85827,-0.011723,521.78,-0.85834,-0.51307,-0.0026196,1062.9,-0.0037664,0.011406,-0.99993,1121.4
> view matrix models
> #3,0.51306,-0.85827,-0.011723,529.18,-0.85834,-0.51307,-0.0026196,1057.2,-0.0037664,0.011406,-0.99993,1120.5
> select add #2
238914 atoms, 241955 bonds, 31149 residues, 2 models selected
> select subtract #3
10434 atoms, 10619 bonds, 1365 residues, 1 model selected
> view matrix models
> #2,0.90915,0.30578,0.28275,154.56,0.11927,0.45932,-0.88023,597.39,-0.39903,0.83398,0.38111,433.81
> view matrix models
> #2,0.90915,0.30578,0.28275,142.59,0.11927,0.45932,-0.88023,615.96,-0.39903,0.83398,0.38111,434.51
> open /Users/prash_mbp/Desktop/AlphaFold/ApplyNCS_125/flif_apply_ncs_125.pdb
Summary of feedback from opening
/Users/prash_mbp/Desktop/AlphaFold/ApplyNCS_125/flif_apply_ncs_125.pdb
---
warnings | Ignored bad PDB record found on line 4267
Duplicate atom serial number found: 1
Duplicate atom serial number found: 2
Duplicate atom serial number found: 3
Duplicate atom serial number found: 4
Duplicate atom serial number found: 5
4259 messages similar to the above omitted
Ignored bad PDB record found on line 8533
Duplicate atom serial number found: 1
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Duplicate atom serial number found: 3
Duplicate atom serial number found: 4
Duplicate atom serial number found: 5
4259 messages similar to the above omitted
Ignored bad PDB record found on line 12799
Duplicate atom serial number found: 1
Duplicate atom serial number found: 2
Duplicate atom serial number found: 3
Duplicate atom serial number found: 4
Duplicate atom serial number found: 5
4259 messages similar to the above omitted
Ignored bad PDB record found on line 17065
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Duplicate atom serial number found: 5
4259 messages similar to the above omitted
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Duplicate atom serial number found: 5
4259 messages similar to the above omitted
Ignored bad PDB record found on line 25597
Duplicate atom serial number found: 1
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Duplicate atom serial number found: 3
Duplicate atom serial number found: 4
Duplicate atom serial number found: 5
4259 messages similar to the above omitted
Ignored bad PDB record found on line 29863
Duplicate atom serial number found: 1
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Duplicate atom serial number found: 3
Duplicate atom serial number found: 4
Duplicate atom serial number found: 5
4259 messages similar to the above omitted
Ignored bad PDB record found on line 34129
Duplicate atom serial number found: 1
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Duplicate atom serial number found: 3
Duplicate atom serial number found: 4
Duplicate atom serial number found: 5
4259 messages similar to the above omitted
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Duplicate atom serial number found: 1
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Duplicate atom serial number found: 3
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Duplicate atom serial number found: 5
4259 messages similar to the above omitted
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Duplicate atom serial number found: 3
Duplicate atom serial number found: 4
Duplicate atom serial number found: 5
4259 messages similar to the above omitted
Ignored bad PDB record found on line 46927
Duplicate atom serial number found: 1
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Duplicate atom serial number found: 3
Duplicate atom serial number found: 4
Duplicate atom serial number found: 5
4259 messages similar to the above omitted
Ignored bad PDB record found on line 51193
Duplicate atom serial number found: 1
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Duplicate atom serial number found: 3
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Duplicate atom serial number found: 5
4259 messages similar to the above omitted
Ignored bad PDB record found on line 55459
Duplicate atom serial number found: 1
Duplicate atom serial number found: 2
Duplicate atom serial number found: 3
Duplicate atom serial number found: 4
Duplicate atom serial number found: 5
4259 messages similar to the above omitted
Ignored bad PDB record found on line 59725
Duplicate atom serial number found: 1
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Duplicate atom serial number found: 3
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Duplicate atom serial number found: 5
4259 messages similar to the above omitted
Ignored bad PDB record found on line 63991
Duplicate atom serial number found: 1
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Duplicate atom serial number found: 3
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Duplicate atom serial number found: 5
4259 messages similar to the above omitted
Ignored bad PDB record found on line 68257
Duplicate atom serial number found: 1
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Duplicate atom serial number found: 3
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Duplicate atom serial number found: 5
4259 messages similar to the above omitted
Ignored bad PDB record found on line 72523
Duplicate atom serial number found: 1
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Duplicate atom serial number found: 3
Duplicate atom serial number found: 4
Duplicate atom serial number found: 5
4259 messages similar to the above omitted
Ignored bad PDB record found on line 76789
Duplicate atom serial number found: 1
Duplicate atom serial number found: 2
Duplicate atom serial number found: 3
Duplicate atom serial number found: 4
Duplicate atom serial number found: 5
4259 messages similar to the above omitted
Ignored bad PDB record found on line 81055
Duplicate atom serial number found: 1
Duplicate atom serial number found: 2
Duplicate atom serial number found: 3
Duplicate atom serial number found: 4
Duplicate atom serial number found: 5
4259 messages similar to the above omitted
Ignored bad PDB record found on line 85321
Duplicate atom serial number found: 1
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Duplicate atom serial number found: 3
Duplicate atom serial number found: 4
Duplicate atom serial number found: 5
4259 messages similar to the above omitted
Ignored bad PDB record found on line 89587
Duplicate atom serial number found: 1
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Duplicate atom serial number found: 3
Duplicate atom serial number found: 4
Duplicate atom serial number found: 5
4259 messages similar to the above omitted
Ignored bad PDB record found on line 93853
Duplicate atom serial number found: 1
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Duplicate atom serial number found: 3
Duplicate atom serial number found: 4
Duplicate atom serial number found: 5
4259 messages similar to the above omitted
Ignored bad PDB record found on line 98119
Duplicate atom serial number found: 1
Duplicate atom serial number found: 2
Duplicate atom serial number found: 3
Duplicate atom serial number found: 4
Duplicate atom serial number found: 5
4259 messages similar to the above omitted
Ignored bad PDB record found on line 102385
Duplicate atom serial number found: 1
Duplicate atom serial number found: 2
Duplicate atom serial number found: 3
Duplicate atom serial number found: 4
Duplicate atom serial number found: 5
4259 messages similar to the above omitted
Ignored bad PDB record found on line 106651
Duplicate atom serial number found: 1
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Duplicate atom serial number found: 3
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Duplicate atom serial number found: 5
4259 messages similar to the above omitted
Ignored bad PDB record found on line 110917
Duplicate atom serial number found: 1
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Duplicate atom serial number found: 3
Duplicate atom serial number found: 4
Duplicate atom serial number found: 5
4259 messages similar to the above omitted
Ignored bad PDB record found on line 115183
Duplicate atom serial number found: 1
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Duplicate atom serial number found: 3
Duplicate atom serial number found: 4
Duplicate atom serial number found: 5
4259 messages similar to the above omitted
Ignored bad PDB record found on line 119449
Duplicate atom serial number found: 1
Duplicate atom serial number found: 2
Duplicate atom serial number found: 3
Duplicate atom serial number found: 4
Duplicate atom serial number found: 5
4259 messages similar to the above omitted
Ignored bad PDB record found on line 123715
Duplicate atom serial number found: 1
Duplicate atom serial number found: 2
Duplicate atom serial number found: 3
Duplicate atom serial number found: 4
Duplicate atom serial number found: 5
4259 messages similar to the above omitted
Ignored bad PDB record found on line 127981
Duplicate atom serial number found: 1
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Duplicate atom serial number found: 3
Duplicate atom serial number found: 4
Duplicate atom serial number found: 5
4259 messages similar to the above omitted
Ignored bad PDB record found on line 132247
Duplicate atom serial number found: 1
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Duplicate atom serial number found: 3
Duplicate atom serial number found: 4
Duplicate atom serial number found: 5
4259 messages similar to the above omitted
Ignored bad PDB record found on line 136513
Duplicate atom serial number found: 1
Duplicate atom serial number found: 2
Duplicate atom serial number found: 3
Duplicate atom serial number found: 4
Duplicate atom serial number found: 5
4259 messages similar to the above omitted
Ignored bad PDB record found on line 140779
Ignored bad PDB record found on line 140780
Chain information for flif_apply_ncs_125.pdb #4
---
Chain | Description
A AA B BA C CA D DA E EA F FA G GA H HA I J K L M N O P Q R S T V W X Y Z | No
description available
> select add #4
151146 atoms, 153641 bonds, 19581 residues, 2 models selected
> color #4 #ff9300ff
> view matrix models
> #2,0.90915,0.30578,0.28275,194.22,0.11927,0.45932,-0.88023,685.79,-0.39903,0.83398,0.38111,640.74,#4,1,0,0,51.628,0,1,0,69.831,0,0,1,206.22
> view matrix models
> #2,0.91274,0.29772,0.27975,193.49,0.11851,0.46237,-0.87873,685.94,-0.39096,0.83521,0.38675,639.01,#4,0.99996,-0.00062951,-0.0093046,55.339,0.00066141,0.99999,0.0034255,68.399,0.0093024,-0.0034315,0.99995,205.31
> view matrix models
> #2,0.91274,0.29772,0.27975,210.82,0.11851,0.46237,-0.87873,679.6,-0.39096,0.83521,0.38675,639.76,#4,0.99996,-0.00062951,-0.0093046,72.669,0.00066141,0.99999,0.0034255,62.066,0.0093024,-0.0034315,0.99995,206.06
> view matrix models
> #2,0.91133,0.30148,0.28032,211.26,0.11306,0.47146,-0.87461,680.25,-0.39584,0.82876,0.39557,637.58,#4,0.99999,0.00042958,-0.0053858,70.743,-0.00035012,0.99989,0.014746,57.999,0.0053916,-0.014744,0.99988,211.44
> view matrix models
> #2,0.91732,0.2896,0.27323,210.89,0.11029,0.47457,-0.87328,680.6,-0.38257,0.83121,0.4034,634.61,#4,0.99979,0.0019246,-0.020386,76.001,-0.0015381,0.99982,0.018959,56.731,0.020418,-0.018924,0.99961,209.01
> view matrix models
> #2,0.9094,0.30522,0.28253,211.39,0.11394,0.47048,-0.87502,680.12,-0.4,0.82794,0.39308,638.62,#4,1,-2.8891e-05,-0.0006534,69.104,3.7657e-05,0.99991,0.013421,58.385,0.00065296,-0.013421,0.99991,212.32
> view matrix models
> #2,0.9094,0.30522,0.28253,209.8,0.11394,0.47048,-0.87502,680.1,-0.4,0.82794,0.39308,644.24,#4,1,-2.8891e-05,-0.0006534,67.512,3.7657e-05,0.99991,0.013421,58.364,0.00065296,-0.013421,0.99991,217.94
> select subtract #4
10434 atoms, 10619 bonds, 1365 residues, 1 model selected
> view matrix models
> #2,0.9094,0.30522,0.28253,-1.8482,0.11394,0.47048,-0.87502,753.18,-0.4,0.82794,0.39308,475.67
> view matrix models
> #2,0.9094,0.30522,0.28253,-35.419,0.11394,0.47048,-0.87502,474.19,-0.4,0.82794,0.39308,483.86
> view matrix models
> #2,0.9094,0.30522,0.28253,-42.763,0.11394,0.47048,-0.87502,481.08,-0.4,0.82794,0.39308,439.62
> select subtract #2
Nothing selected
> set bgColor white
> set bgColor black
OpenGL version: 4.1 Metal - 83
OpenGL renderer: Apple M1 Pro
OpenGL vendor: Apple
Python: 3.9.11
Locale: UTF-8
Qt version: PyQt6 6.4.2, Qt 6.4.2
Qt runtime version: 6.4.3
Qt platform: cocoa
Hardware:
Hardware Overview:
Model Name: MacBook Pro
Model Identifier: MacBookPro18,1
Model Number: MK183LL/A
Chip: Apple M1 Pro
Total Number of Cores: 10 (8 performance and 2 efficiency)
Memory: 16 GB
System Firmware Version: 8419.60.44
OS Loader Version: 8419.60.44
Software:
System Software Overview:
System Version: macOS 13.1 (22C65)
Kernel Version: Darwin 22.2.0
Time since boot: 1 day, 1 hour, 48 minutes
Graphics/Displays:
Apple M1 Pro:
Chipset Model: Apple M1 Pro
Type: GPU
Bus: Built-In
Total Number of Cores: 16
Vendor: Apple (0x106b)
Metal Support: Metal 3
Displays:
Color LCD:
Display Type: Built-in Liquid Retina XDR Display
Resolution: 3456 x 2234 Retina
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: Yes
Connection Type: Internal
DELL U3421WE:
Resolution: 3440 x 1440 (UWQHD - Ultra-Wide Quad HD)
UI Looks like: 3440 x 1440 @ 60.00Hz
Mirror: Off
Online: Yes
Rotation: Supported
Installed Packages:
alabaster: 0.7.13
appdirs: 1.4.4
appnope: 0.1.3
asttokens: 2.2.1
Babel: 2.12.1
backcall: 0.2.0
beautifulsoup4: 4.11.2
blockdiag: 3.0.0
build: 0.10.0
certifi: 2021.10.8
cftime: 1.6.2
charset-normalizer: 3.1.0
ChimeraX-AddCharge: 1.5.9
ChimeraX-AddH: 2.2.4
ChimeraX-AlignmentAlgorithms: 2.0.1
ChimeraX-AlignmentHdrs: 3.3.1
ChimeraX-AlignmentMatrices: 2.1
ChimeraX-Alignments: 2.9.3
ChimeraX-AlphaFold: 1.0
ChimeraX-AltlocExplorer: 1.0.3
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.1
ChimeraX-Atomic: 1.43.10
ChimeraX-AtomicLibrary: 10.0.6
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.3.2
ChimeraX-BasicActions: 1.1.2
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.1.2
ChimeraX-BondRot: 2.0.1
ChimeraX-BugReporter: 1.0.1
ChimeraX-BuildStructure: 2.8
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.2.2
ChimeraX-ButtonPanel: 1.0.1
ChimeraX-CageBuilder: 1.0.1
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.3.2
ChimeraX-ChangeChains: 1.0.2
ChimeraX-CheckWaters: 1.3.1
ChimeraX-ChemGroup: 2.0.1
ChimeraX-Clashes: 2.2.4
ChimeraX-ColorActions: 1.0.3
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.3
ChimeraX-CommandLine: 1.2.5
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0.1
ChimeraX-Core: 1.6rc202303292224
ChimeraX-CoreFormats: 1.1
ChimeraX-coulombic: 1.4.2
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0.1
ChimeraX-DataFormats: 1.2.3
ChimeraX-Dicom: 1.2
ChimeraX-DistMonitor: 1.4
ChimeraX-DockPrep: 1.1.1
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ESMFold: 1.0
ChimeraX-FileHistory: 1.0.1
ChimeraX-FunctionKey: 1.0.1
ChimeraX-Geometry: 1.3
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1.1
ChimeraX-Hbonds: 2.4
ChimeraX-Help: 1.2.1
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ItemsInspection: 1.0.1
ChimeraX-Label: 1.1.7
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.5
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.2
ChimeraX-Map: 1.1.4
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0.1
ChimeraX-MapFilter: 2.0.1
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1.1
ChimeraX-Markers: 1.0.1
ChimeraX-Mask: 1.0.2
ChimeraX-MatchMaker: 2.0.12
ChimeraX-MDcrds: 2.6
ChimeraX-MedicalToolbar: 1.0.2
ChimeraX-Meeting: 1.0.1
ChimeraX-MLP: 1.1.1
ChimeraX-mmCIF: 2.12
ChimeraX-MMTF: 2.2
ChimeraX-Modeller: 1.5.9
ChimeraX-ModelPanel: 1.3.7
ChimeraX-ModelSeries: 1.0.1
ChimeraX-Mol2: 2.0
ChimeraX-Mole: 1.0
ChimeraX-Morph: 1.0.2
ChimeraX-MouseModes: 1.2
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nifti: 1.0
ChimeraX-NRRD: 1.0
ChimeraX-Nucleotides: 2.0.3
ChimeraX-OpenCommand: 1.10.1
ChimeraX-PDB: 2.7
ChimeraX-PDBBio: 1.0
ChimeraX-PDBLibrary: 1.0.2
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0.1
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1
ChimeraX-PubChem: 2.1
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-RenderByAttr: 1.1
ChimeraX-RenumberResidues: 1.1
ChimeraX-ResidueFit: 1.0.1
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 3.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5.1
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0.1
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0.1
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.8.3
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0.1
ChimeraX-Shortcuts: 1.1.1
ChimeraX-ShowSequences: 1.0.1
ChimeraX-SideView: 1.0.1
ChimeraX-Smiles: 2.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.10.2
ChimeraX-STL: 1.0.1
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.1.2
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0.1
ChimeraX-SwapAA: 2.0.1
ChimeraX-SwapRes: 2.2.1
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.1.2
ChimeraX-ToolshedUtils: 1.2.1
ChimeraX-Topography: 1.0
ChimeraX-Tug: 1.0.1
ChimeraX-UI: 1.28.4
ChimeraX-uniprot: 2.2.2
ChimeraX-UnitCell: 1.0.1
ChimeraX-ViewDockX: 1.2
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0.1
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0.2
ChimeraX-WebServices: 1.1.1
ChimeraX-Zone: 1.0.1
colorama: 0.4.6
comm: 0.1.3
contourpy: 1.0.7
cxservices: 1.2.2
cycler: 0.11.0
Cython: 0.29.33
debugpy: 1.6.6
decorator: 5.1.1
docutils: 0.19
executing: 1.2.0
filelock: 3.9.0
fonttools: 4.39.3
funcparserlib: 1.0.1
grako: 3.16.5
h5py: 3.8.0
html2text: 2020.1.16
idna: 3.4
ihm: 0.35
imagecodecs: 2022.2.22
imagesize: 1.4.1
importlib-metadata: 6.1.0
ipykernel: 6.21.1
ipython: 8.10.0
ipython-genutils: 0.2.0
ipywidgets: 8.0.6
jedi: 0.18.2
Jinja2: 3.1.2
jupyter-client: 8.0.2
jupyter-core: 5.3.0
jupyterlab-widgets: 3.0.7
kiwisolver: 1.4.4
line-profiler: 4.0.2
lxml: 4.9.2
lz4: 4.3.2
MarkupSafe: 2.1.2
matplotlib: 3.6.3
matplotlib-inline: 0.1.6
msgpack: 1.0.4
nest-asyncio: 1.5.6
netCDF4: 1.6.2
networkx: 2.8.8
nibabel: 5.0.1
nptyping: 2.5.0
numexpr: 2.8.4
numpy: 1.23.5
openvr: 1.23.701
packaging: 21.3
ParmEd: 3.4.3
parso: 0.8.3
pep517: 0.13.0
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 9.3.0
pip: 23.0
pkginfo: 1.9.6
platformdirs: 3.2.0
prompt-toolkit: 3.0.38
psutil: 5.9.4
ptyprocess: 0.7.0
pure-eval: 0.2.2
pycollada: 0.7.2
pydicom: 2.3.0
Pygments: 2.14.0
pynrrd: 1.0.0
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 3.0.9
pyproject-hooks: 1.0.0
PyQt6-commercial: 6.4.2
PyQt6-Qt6: 6.4.3
PyQt6-sip: 13.4.1
PyQt6-WebEngine-commercial: 6.4.0
PyQt6-WebEngine-Qt6: 6.4.3
python-dateutil: 2.8.2
pytz: 2023.3
pyzmq: 25.0.2
qtconsole: 5.4.0
QtPy: 2.3.1
RandomWords: 0.4.0
requests: 2.28.2
scipy: 1.9.3
setuptools: 67.4.0
setuptools-scm: 7.0.5
sfftk-rw: 0.7.3
six: 1.16.0
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
soupsieve: 2.4
sphinx: 6.1.3
sphinx-autodoc-typehints: 1.22
sphinxcontrib-applehelp: 1.0.4
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 2.0.1
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.5
stack-data: 0.6.2
tables: 3.7.0
tcia-utils: 1.2.0
tifffile: 2022.10.10
tinyarray: 1.2.4
tomli: 2.0.1
tornado: 6.2
traitlets: 5.9.0
typing-extensions: 4.5.0
urllib3: 1.26.15
wcwidth: 0.2.6
webcolors: 1.12
wheel: 0.38.4
wheel-filename: 1.4.1
widgetsnbextension: 4.0.7
zipp: 3.15.0
Change History (2)
comment:1 by , 3 years ago
| Component: | Unassigned → UI |
|---|---|
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → assigned |
| Summary: | ChimeraX bug report submission → Switching background color loses mouse wheel zoom |
comment:2 by , 3 years ago
| Resolution: | → not a bug |
|---|---|
| Status: | assigned → closed |
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The mouse pointer needs to be in the graphics pane for the scroll-wheel to do zooming. If you click on a toolbar button like "white background" and leave the mouse pointer on the toolbar then you are right the scroll-wheel will not scroll the graphics. This is the way Qt mouse events works -- they are sent to the panel the mouse is over. So to zoom the graphics the mouse pointer needs to be over the graphics.