mmCIF "more info" shows raw HTML

[Tristan Croll]

The following bug report has been submitted:
Platform:        Windows-10-10.0.22621
ChimeraX Version: 1.6.dev202212302205 (2022-12-30 22:05:38 UTC)
Description
After hitting the "more info" link on the summary for a cryo-EM structure, the info in the "CryoEM Map" part of the table appears as raw html rather than links.

Log:
> isolde shorthand
    
    
    Initialising ISOLDE-specific command aliases:
    Alias	Equivalent full command
    -------------------------------------------------
    st	isolde step {arguments}
    aw	isolde add water {arguments}
    awsf	isolde add water {arguments} sim false
    al	isolde add ligand {arguments}
    aa	isolde add aa $1 sel {arguments}
    ht	isolde mod his sel {arguments}
    so	setattr sel atoms occupancy {arguments}
    ab	isolde adjust bfactors {arguments}
    ss	isolde sim start sel
    rt	isolde release torsions sel {arguments}
    rd	isolde release distances sel {arguments}
    ra	rd; rt
    pf	isolde pepflip sel
    cf	isolde cisflip sel
    cbb	color bfactor {arguments}
    cbo	color byattr occupancy {arguments}
    cbc	color {arguments} bychain; color {arguments} byhet
    cs	clipper set contourSensitivity {arguments}
    

  
UCSF ChimeraX version: 1.6.dev202212302205 (2022-12-30)  
© 2016-2022 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open 7y7a

Summary of feedback from opening 7y7a fetched from pdb  
---  
warnings | Atom C14 has no neighbors to form bonds with according to residue
template for CLA /A7:849  
Atom C36 has no neighbors to form bonds with according to residue template for
LMG /B9:627  
Atom C14 has no neighbors to form bonds with according to residue template for
CLA /Ao:849  
note | Fetching compressed mmCIF 7y7a from
http://files.rcsb.org/download/7y7a.cif  
  
7y7a title:  
In situ double-PBS-PSII-PSI-LHCs megacomplex from Porphyridium purpureum.
[more info...]  
  
Chain information for 7y7a #1  
---  
Chain | Description | UniProt  
17 1o | Chlorophyll a-b binding protein, chloroplastic | A0A5J4Z6J3_PORPP  
1G 1N 1X 1Y B5 B6 BA BD BH BJ BL BQ BT BU BW Ba Bb Bf Bg Bh Bi Bk C2 CA CF CM
CW Cc D3 D5 D6 DA DC DD DH DJ DL DQ DT DU DV DW Da Db Df Dg Dh Di Dk Dp E2 EF
EM Ec F3 F5 F6 FA FC FD FH FJ FL FQ FT FU FV FW Fa Fb Ff Fg Fh Fi Fk Fp G2 GA
GF GM GW Gc H3 H5 H6 HA HC HD HH HJ HL HQ HT HU HV HW Ha Hb Hf Hg Hh Hi Hk Hp
I2 IA IF IM IW Ic J3 J5 J6 JC JD JH JJ JL JQ JT JU JV Ja Jb Jf Jg Jh Ji Jk Jp
K2 KF KM Kc L3 L5 L6 LA LC LD LH LJ LL LQ LT LU LV LW La Lb Lf Lg Lh Li Lk Lp
M2 MA MF MM MW Mc N3 N5 N6 NA NC ND NL NQ NT NU NV NW Nb Ng Ni Np O2 OA OF OH
OJ OM OW Oa Oc Of Oh Ok P1 P3 P4 P5 P6 P8 PA PC PD PI PK PL PP PQ PR PS PT PU
PV PW Pb Pe Pg Pi Pj Pl Pn Pp Q2 QA QF QH QJ QM QW Qa Qc Qf Qh Qk R1 R3 R4 R5
R6 R8 RA RC RD RI RK RL RP RQ RR RS RT RU RV RW Rb Re Rg Ri Rj Rl Rn Rp S2 SA
SF SH SJ SM SW Sa Sc Sf Sh Sk T1 T3 T4 T5 T6 T8 TC TD TI TK TL TP TQ TR TS TT
TU TV Tb Te Tg Ti Tj Tl Tn Tp U2 UF UH UJ UM Ua Uc Uf Uh Uk V1 V3 V4 V5 V6 V8
VA VC VD VI VK VL VP VQ VR VS VT VU VV VW Vb Ve Vg Vi Vj Vl Vn Vp W2 WF WH WJ
WM Wa Wc Wf Wh Wk X3 X5 X6 XA XC XD XL XQ XT XU XV XW Xb Xg Xi Xp Y1 Y2 Y4 Y8
YA YF YH YI YJ YK YM YP YR YS YW Ya Yc Ye Yf Yh Yj Yk Yl Yn Z3 Z6 ZA ZC ZQ ZT
ZV ZW Zb Zp a1 a4 a8 aA aI aK aP aR aS aW ae aj al an b6 bA bQ bT bW bb c1 c3
c4 c8 cC cI cK cP cR cS cV ce cj cl cn cp d6 dA dQ dT dW db e1 e3 e4 e8 eA eC
eI eK eP eR eS eV eW ee ej el en ep f6 fQ fT fb g1 g3 g4 g8 gA gC gI gK gP gR
gS gV gW ge gj gl gn gp h6 hQ hT hb i1 i3 i4 i8 iC iI iK iP iR iS iV ie ij il
in ip j6 jQ jT jb k1 k3 k4 k8 kC kI kK kP kR kS kV ke kj kl kn kp l6 lQ lT lb
m1 m3 m4 m8 mC mI mK mP mR mS mV me mj ml mn mp n6 nQ nT nb p6 pQ pT pb qG qN
qX qY r6 rQ rT rb sG sN sX sY t6 tQ tT tb uG uN uX uY v6 vQ vT vb wG wN wX wY
yG yN yX yY | B-phycoerythrin beta chain | PHEB_PORPP  
27 2o | Chlorophyll a-b binding protein of LHCII type III, chloroplastic |
P93450_PORPP  
2B 2d ZB Zd | Lrc4 | A0A5J4YTV6_PORPP  
37 3o | Chlorophyll a-b binding protein, chloroplastic | A0A5J4YYC4_PORPP  
3B 3d aB ad | LRC5 | A0A5J4Z2M2_PORPP  
47 4o | Chlorophyll a-b binding protein 1B-21, chloroplastic |
A0A5J4ZAY0_PORPP  
4B 4d bB bd | FAS1 domain-containing protein | A0A5J4ZA95_PORPP  
57 5o | Chlorophyll a-b binding protein 1B-21, chloroplastic |
A0A5J4YSS5_PORPP  
5B 5d YB Yd | LPP2 | A0A5J4Z365_PORPP  
67 6o | Chlorophyll a-b binding protein 1B-21, chloroplastic |
A0A5J4YN76_PORPP  
6B 6d 7B 7d | Phycobiliprotein ApcE | A0A343KPB8_PORPP  
77 7o | Fucoxanthin-chlorophyll a-c binding protein, chloroplastic |
A0A5J4YKR2_PORPP  
87 8o | RedCAP | A0A5J4YP51_PORPP  
A1 A2 A4 A8 AF AI AK AM AP AR AS Ac Ae Aj Al An Y5 YD Yg Yi | R-phycoerythrin
gamma chain, chloroplastic | A0A5J4YX19_PORPP  
A3 AC AV Ap w6 wQ wT wb x6 xQ xT xb | R-phycoerythrin gamma chain,
chloroplastic | A0A5J4YZM7_PORPP  
A5 A6 AD AH AJ AL AQ AT AU Aa Ab Af Ag Ah Ai Ak B2 BF BM Bc C3 C5 C6 CC CD CH
CJ CL CQ CT CU CV Ca Cb Cf Cg Ch Ci Ck Cp D2 DF DM Dc E3 E5 E6 EC ED EH EJ EL
EQ ET EU EV Ea Eb Ef Eg Eh Ei Ek Ep F2 FF FM Fc G3 G5 G6 GC GD GH GJ GL GQ GT
GU GV Ga Gb Gf Gg Gh Gi Gk Gp H2 HF HM Hc I3 I5 I6 IC ID IH IJ IL IQ IT IU IV
Ia Ib If Ig Ih Ii Ik Ip J2 JA JF JM JW Jc K3 K5 K6 KC KD KH KJ KL KQ KT KU KV
Ka Kb Kf Kg Kh Ki Kk Kp L2 LF LM Lc M3 M5 M6 MC MD ML MQ MT MU MV Mb Mg Mi Mp
N2 NF NH NJ NM Na Nc Nf Nh Nk O1 O3 O4 O5 O6 O8 OC OD OI OK OL OP OQ OR OS OT
OU OV Ob Oe Og Oi Oj Ol On Op P2 PF PH PJ PM Pa Pc Pf Ph Pk Q1 Q3 Q4 Q5 Q6 Q8
QC QD QI QK QL QP QQ QR QS QT QU QV Qb Qe Qg Qi Qj Ql Qn Qp R2 RF RH RJ RM Ra
Rc Rf Rh Rk S1 S3 S4 S5 S6 S8 SC SD SI SK SL SP SQ SR SS ST SU SV Sb Se Sg Si
Sj Sl Sn Sp T2 TA TF TH TJ TM TW Ta Tc Tf Th Tk U1 U3 U4 U5 U6 U8 UC UD UI UK
UL UP UQ UR US UT UU UV Ub Ue Ug Ui Uj Ul Un Up V2 VF VH VJ VM Va Vc Vf Vh Vk
W1 W3 W4 W5 W6 W8 WC WD WI WK WL WP WQ WR WS WT WU WV Wb We Wg Wi Wj Wl Wn Wp
X2 XF XH XJ XM Xa Xc Xf Xh Xk Y3 Y6 YC YQ YT YV Yb Yp Z1 Z4 Z8 ZI ZK ZP ZR ZS
Ze Zj Zl Zn a3 a6 aC aQ aT aV ab ap b1 b4 b8 bI bK bP bR bS be bj bl bn c6 cQ
cT cb d1 d3 d4 d8 dC dI dK dP dR dS dV de dj dl dn dp e6 eQ eT eb f1 f3 f4 f8
fC fI fK fP fR fS fV fe fj fl fn fp g6 gQ gT gb h1 h3 h4 h8 hC hI hK hP hR hS
hV he hj hl hn hp i6 iQ iT ib j1 j3 j4 j8 jC jI jK jP jR jS jV je jj jl jn jp
k6 kQ kT kb l1 l3 l4 l8 lC lI lK lP lR lS lV le lj ll ln lp m6 mQ mT mb o6 oQ
oT ob pG pN pX pY q6 qQ qT qb rG rN rX rY s6 sQ sT sb tG tN tX tY u6 uQ uT ub
vG vN vX vY xG xN xX xY zG zN zX zY | Phycoerythrin alpha subunit |
E2IH77_PORPP  
A7 Ao | Photosystem I P700 chlorophyll a apoprotein A1 | W0S1N1_PORPP  
A9 AE AO AZ Am a9 aE aO aZ am | Photosystem II protein D1 | W0RZ08_PORPP  
AA AW EA EW | Linker4 | A0A5J4YXP2_PORPP  
AB Ad CB Cd EB Ed GB Gd JB Jd KB Kd NB Nd PB Pd RB Rd TB Td cB cd eB ed gB gd
iB id lB ld mB md pB pd rB rd tB td vB vd | Allophycocyanin alpha subunit |
W0RYM0_PORPP  
AG AN AX AY aG aN aX aY | LRH |  
B1 B4 B8 BI BK BP BR BS Be Bj Bl Bn | Phycobilisome rod-core linker
polypeptide | W0RZ90_PORPP  
B3 BC BV Bp y6 yQ yT yb | R-phycoerythrin gamma chain, chloroplastic |
A0A5J4YZH3_PORPP  
B7 Bo | PsaB | W0RYU6_PORPP  
B9 BE BO BZ Bm b9 bE bO bZ bm | Photosystem II CP47 reaction center protein |
W0RZ84_PORPP  
BB Bd DB Dd FB Fd HB Hd IB Id LB Ld MB Md OB Od QB Qd SB Sd UB Ud dB dd fB fd
hB hd jB jd kB kd nB nd oB od qB qd sB sd uB ud wB wd | Allophycocyanin beta
subunit | W0S279_PORPP  
C1 C4 C8 CI CK CP CR CS Ce Cj Cl Cn E1 E4 E8 EI EK EP ER ES Ee Ej El En G1 G4
G8 GI GK GP GR GS Ge Gj Gl Gn I1 I4 I8 II IK IP IR IS Ie Ij Il In K1 K4 K8 KI
KK KP KR KS Ke Kj Kl Kn M1 M4 M8 MI MK MP MR MS Me Mj Ml Mn | C-phycocyanin
alpha subunit | W0RYI4_PORPP  
C7 Co | Photosystem I iron-sulfur center | W0S231_PORPP  
C9 CE CO CZ Cm c9 cE cO cZ cm | Photosystem II CP43 reaction center protein |
W0RYK4_PORPP  
D1 D4 D8 DI DK DP DR DS De Dj Dl Dn F1 F4 F8 FI FK FP FR FS Fe Fj Fl Fn H1 H4
H8 HI HK HP HR HS He Hj Hl Hn J1 J4 J8 JI JK JP JR JS Je Jj Jl Jn L1 L4 L8 LI
LK LP LR LS Le Lj Ll Ln N1 N4 N8 NI NK NP NR NS Ne Nj Nl Nn | C-phycocyanin
beta subunit | W0RZB2_PORPP  
D7 Do | Photosystem I reaction center subunit II | W0RZ23_PORPP  
D9 DE DO DZ Dm d9 dE dO dZ dm | Photosystem II D2 protein | W0RYZ0_PORPP  
E7 Eo | Photosystem I reaction center subunit IV | W0RYG1_PORPP  
E9 EE EO EZ Em e9 eE eO eZ em | Cytochrome b559 subunit alpha | W0RYH5_PORPP  
F7 Fo | Photosystem I reaction center subunit III | W0RZ71_PORPP  
F9 FE FO FZ Fm f9 fE fO fZ fm | Cytochrome b559 subunit beta | W0S1X0_PORPP  
G7 Go | Cytochrome c6 | W0S1L8_PORPP  
G9 GE GO GZ Gm g9 gE gO gZ gm | PSII_Pbs31 domain-containing protein |
A0A5J4Z270_PORPP  
H9 HE HO HZ Hm h9 hE hO hZ hm | Photosystem II reaction center protein H |
W0RYU5_PORPP  
I7 Io | Photosystem I reaction center subunit VIII | W0RZ51_PORPP  
I9 IE IO IZ Im i9 iE iO iZ im | Photosystem II reaction center protein I |
W0RYJ5_PORPP  
J7 Jo | Photosystem I reaction center subunit IX | W0RYG9_PORPP  
J9 JE JO JZ Jm j9 jE jO jZ jm | Photosystem II reaction center protein J |
W0RYQ6_PORPP  
K7 Ko | Photosystem I reaction center subunit PsaK | W0RZ04_PORPP  
K9 KE KO KZ Km k9 kE kO kZ km | Photosystem II reaction center protein K |
W0RZ28_PORPP  
KA KW UA UW | CaRSP1 | A0A5J4YJY8_PORPP  
L7 Lo | Photosystem I reaction center subunit XI | W0S1Z0_PORPP  
L9 LE LO LZ Lm l9 lE lO lZ lm | Photosystem II reaction center protein L |
W0RZ31_PORPP  
M7 Mo | Photosystem I reaction center subunit XII | W0S1Z9_PORPP  
M9 ME MO MZ Mm m9 mE mO mZ mm | PsbM | A0A5J4YYD7_PORPP  
MH Ma Mf Mh ZH Za Zf Zh | R-phycoerythrin gamma chain, chloroplastic |
A0A5J4YNU6_PORPP  
MJ Mk ZJ Zk | Phycobilisome 27.9 kDa linker polypeptide, phycoerythrin-
associated, rod | A0A5J4Z323_PORPP  
N7 No | Ferredoxin | W0RYF9_PORPP  
N9 NE NO NZ Nm n9 nE nO nZ nm | Psb34 |  
O7 Oo | Photosystem I subunit O | A0A5J4YUC8_PORPP  
O9 OE OO OZ Om o9 oE oO oZ om | Oxygen-evolving enhancer protein |
E5RPB3_PORPP  
P9 PE PO PZ Pm p9 pE pO pZ pm | CNT |  
Q9 QE QO QZ Qm q9 qE qO qZ qm | PsbQ' | A0A5J4Z679_PORPP  
R7 Ro | PsaR | A0A5J4YR43_PORPP  
R9 RE RO RZ Rm r9 rE rO rZ rm | Photosystem II protein Y | W0S1X5_PORPP  
S9 SE SO SZ Sm sE | LPP1 |  
T9 TE TO TZ Tm t9 tE tO tZ tm | Photosystem II reaction center protein T |
W0RYV0_PORPP  
U9 UE UO UZ Um u9 uE uO uZ um | PS II complex 12 kDa extrinsic protein |
A0A5J4YLQ6_PORPP  
V9 VE VO VZ Vm v9 vE vO vZ vm | Cytochrome c550 | W0RYZ6_PORPP  
VB Vd xB xd | Allophycocyanin gamma subunit | W0S1U6_PORPP  
W9 WE WO WZ Wm w9 wE wO wZ wm | PsbW |  
WA WW cA cW | CaRSP2 | A0A5J4YX67_PORPP  
WB Wd yB yd | Allophycocyanin beta 18 subunit | W0RZE2_PORPP  
X1 X4 X8 XI XK XP XR XS Xe Xj Xl Xn | Phycobilisome 31.8 kDa linker
polypeptide, phycoerythrin-associated, rod | A0A5J4YM59_PORPP  
X9 XE XO XZ Xm x9 xE xO xZ xm | Photosystem II reaction center X protein |
W0RZ76_PORPP  
XB Xd zB zd | Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-
associated, core | A0A5J4YVZ2_PORPP  
Y9 YE YO YZ Ym y9 yE yO yZ ym | Photosystem II reaction center protein Ycf12 |
W0RZ91_PORPP  
YL YU bL bU | LR6 | A0A5J4YMI8_PORPP  
Z7 Zo | LPS1 |  
Z9 ZE ZO ZZ Zm z9 zE zO zZ zm | Photosystem II reaction center protein Z |
W0RZ40_PORPP  
b3 bC bV bp | Phycobilisome 32.1 kDa linker polypeptide, phycocyanin-
associated, rod | A0A5J4YX63_PORPP  
d2 dF dM dc | Phycobilisome 27.9 kDa linker polypeptide, phycoerythrin-
associated, rod | A0A5J4Z162_PORPP  
e5 eD eg ei | Phycobilisome 31.8 kDa linker polypeptide, phycoerythrin-
associated, rod | A0A5J4Z7F4_PORPP  
fA fW hA hW | FAS1 domain-containing protein | A0A5J4Z027_PORPP  
z6 zQ zT zb | Phycobilisome 31.8 kDa linker polypeptide, phycoerythrin-
associated, rod | A0A5J4YI31_PORPP  
  
Non-standard residues in 7y7a #1  
---  
3XQ — (2S)-2,3-dihydroxypropyl octadecanoate  
BCR — β-carotene  
BCT — bicarbonate ion  
BGC — beta-D-glucopyranose (beta-D-glucose; D-glucose; glucose)  
CL — chloride ion  
CLA — chlorophyll A  
CYC — phycocyanobilin  
DGD — digalactosyl diacyl glycerol (DGDG)  
FE — Fe (III) ion  
FES — FE2/S2 (inorganic) cluster  
GOL — glycerol (glycerin; propane-1,2,3-triol)  
HEM — protoporphyrin IX containing Fe (HEME)  
LHG — 1,2-dipalmitoyl-phosphatidyl-glycerole  
LMG — 1,2-distearoyl-monogalactosyl-diglyceride  
OEX — Ca-MN4-O5 cluster  
PEB — phycoerythrobilin  
PHO — pheophytin A  
PL9 —
2,3-dimethyl-5-(3,7,11,15,19,23,27,31,35-nonamethyl-2,6,10,14,18,22,26,30,34-hexatriacontanonaenyl-2,5-cyclohexadiene-1,4-dione-2,3-dimethyl-5-solanesyl-1,4-benzoquinone
(plastoquinone 9)  
PQN — phylloquinone (vitamin K1; 2-methyl-3-phytyl-1,4-naphthoquinone)  
PUB — phycourobilin  
SF4 — iron/sulfur cluster  
ZEX —
(1R,2S)-4-{(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(4S)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-ol  
  

> log metadata #1

Metadata for 7y7a #1  
---  
Title | In situ double-PBS-PSII-PSI-LHCs megacomplex from Porphyridium
purpureum.  
Citation | You, X., Zhang, X., Cheng, J., Xiao, Y.N., Sun, S., Sui, S.F. (?).
Structure of in situ Double-PBS-PSII-PSI-LHCs megacomplex at 4.3 Angstroms
resolution. To Be Published  
Non-standard residues | 3XQ — (2S)-2,3-dihydroxypropyl octadecanoate  
BCR — β-carotene  
BCT — bicarbonate ion  
BGC — beta-D-glucopyranose (beta-D-glucose; D-glucose; glucose)  
CL — chloride ion  
CLA — chlorophyll A  
CYC — phycocyanobilin  
DGD — digalactosyl diacyl glycerol (DGDG)  
FE — Fe (III) ion  
FES — FE2/S2 (inorganic) cluster  
GOL — glycerol (glycerin; propane-1,2,3-triol)  
HEM — protoporphyrin IX containing Fe (HEME)  
LHG — 1,2-dipalmitoyl-phosphatidyl-glycerole  
LMG — 1,2-distearoyl-monogalactosyl-diglyceride  
OEX — Ca-MN4-O5 cluster  
PEB — phycoerythrobilin  
PHO — pheophytin A  
PL9 —
2,3-dimethyl-5-(3,7,11,15,19,23,27,31,35-nonamethyl-2,6,10,14,18,22,26,30,34-hexatriacontanonaenyl-2,5-cyclohexadiene-1,4-dione-2,3-dimethyl-5-solanesyl-1,4-benzoquinone
(plastoquinone 9)  
PQN — phylloquinone (vitamin K1; 2-methyl-3-phytyl-1,4-naphthoquinone)  
PUB — phycourobilin  
SF4 — iron/sulfur cluster  
ZEX —
(1R,2S)-4-{(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(4S)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-ol  
Gene source | Porphyridium purpureum  
CryoEM Map | <a href="https://www.ebi.ac.uk/emdb/EMD-33658">EMDB 33658</a> —
<a href="cxcmd:open 33658 from emdb">open map</a>  
Experimental method | Electron microscopy  
Resolution | 4.3Å




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Python: 3.9.11
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Installed Packages:
    alabaster: 0.7.12
    appdirs: 1.4.4
    asttokens: 2.2.1
    Babel: 2.11.0
    backcall: 0.2.0
    blockdiag: 3.0.0
    build: 0.8.0
    certifi: 2022.12.7
    cftime: 1.6.2
    charset-normalizer: 2.1.1
    ChimeraX-AddCharge: 1.5.8
    ChimeraX-AddH: 2.2.3
    ChimeraX-AlignmentAlgorithms: 2.0
    ChimeraX-AlignmentHdrs: 3.3.1
    ChimeraX-AlignmentMatrices: 2.1
    ChimeraX-Alignments: 2.8
    ChimeraX-AlphaFold: 1.0
    ChimeraX-AltlocExplorer: 1.0.3
    ChimeraX-AmberInfo: 1.0
    ChimeraX-Arrays: 1.0
    ChimeraX-Atomic: 1.43.4
    ChimeraX-AtomicLibrary: 10.0
    ChimeraX-AtomSearch: 2.0.1
    ChimeraX-AxesPlanes: 2.3
    ChimeraX-BasicActions: 1.1.2
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 2.1.2
    ChimeraX-BondRot: 2.0.1
    ChimeraX-BugReporter: 1.0.1
    ChimeraX-BuildStructure: 2.7.2
    ChimeraX-Bumps: 1.0
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    ChimeraX-ButtonPanel: 1.0.1
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    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.3.1
    ChimeraX-ChangeChains: 1.0.2
    ChimeraX-CheckWaters: 1.3.1
    ChimeraX-ChemGroup: 2.0
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    ChimeraX-Clipper: 0.20.0
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    ChimeraX-ColorKey: 1.5.2
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    ChimeraX-Contacts: 1.0.1
    ChimeraX-Core: 1.6.dev202212302205
    ChimeraX-CoreFormats: 1.1
    ChimeraX-coulombic: 1.4.1
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-CrystalContacts: 1.0.1
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    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ESMFold: 1.0
    ChimeraX-ExperimentalCommands: 1.0
    ChimeraX-FileHistory: 1.0.1
    ChimeraX-FunctionKey: 1.0.1
    ChimeraX-Geometry: 1.2
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.1
    ChimeraX-Hbonds: 2.4
    ChimeraX-Help: 1.2.1
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.1
    ChimeraX-ImageFormats: 1.2
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0.1
    ChimeraX-ISOLDE: 1.6.dev0
    ChimeraX-ItemsInspection: 1.0.1
    ChimeraX-Label: 1.1.7
    ChimeraX-ListInfo: 1.1.1
    ChimeraX-Log: 1.1.5
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Maestro: 1.8.2
    ChimeraX-Map: 1.1.3
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0.1
    ChimeraX-MapFilter: 2.0.1
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.1.1
    ChimeraX-Markers: 1.0.1
    ChimeraX-Mask: 1.0.1
    ChimeraX-MatchMaker: 2.0.11
    ChimeraX-MDcrds: 2.6
    ChimeraX-MedicalToolbar: 1.0.2
    ChimeraX-Meeting: 1.0.1
    ChimeraX-MLP: 1.1
    ChimeraX-mmCIF: 2.10
    ChimeraX-MMTF: 2.2
    ChimeraX-Modeller: 1.5.8
    ChimeraX-ModelPanel: 1.3.6
    ChimeraX-ModelSeries: 1.0.1
    ChimeraX-Mol2: 2.0
    ChimeraX-Mole: 1.0
    ChimeraX-Morph: 1.0.1
    ChimeraX-MouseModes: 1.2
    ChimeraX-Movie: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nucleotides: 2.0.3
    ChimeraX-OpenCommand: 1.9.3
    ChimeraX-PDB: 2.6.10
    ChimeraX-PDBBio: 1.0
    ChimeraX-PDBLibrary: 1.0.2
    ChimeraX-PDBMatrices: 1.0
    ChimeraX-PickBlobs: 1.0.1
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.1
    ChimeraX-PubChem: 2.1
    ChimeraX-ReadPbonds: 1.0.1
    ChimeraX-Registration: 1.1.1
    ChimeraX-RemoteControl: 1.0
    ChimeraX-RenderByAttr: 1.0
    ChimeraX-RenumberResidues: 1.1
    ChimeraX-ResidueFit: 1.0.1
    ChimeraX-RestServer: 1.1
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 3.0
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.5.1
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0.1
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0
    ChimeraX-SelInspector: 1.0
    ChimeraX-SeqView: 2.8.1
    ChimeraX-Shape: 1.0.1
    ChimeraX-Shell: 1.0.1
    ChimeraX-Shortcuts: 1.1.1
    ChimeraX-ShowSequences: 1.0.1
    ChimeraX-SideView: 1.0.1
    ChimeraX-Smiles: 2.1
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.10.1
    ChimeraX-STL: 1.0
    ChimeraX-Storm: 1.0
    ChimeraX-StructMeasure: 1.1.1
    ChimeraX-Struts: 1.0.1
    ChimeraX-Surface: 1.0
    ChimeraX-SwapAA: 2.0.1
    ChimeraX-SwapRes: 2.2
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.1.2
    ChimeraX-ToolshedUtils: 1.2.1
    ChimeraX-Topography: 1.0
    ChimeraX-Tug: 1.0.1
    ChimeraX-UI: 1.26
    ChimeraX-uniprot: 2.2.1
    ChimeraX-UnitCell: 1.0.1
    ChimeraX-ViewDockX: 1.1.6
    ChimeraX-VIPERdb: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0.1
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0.1
    ChimeraX-WebServices: 1.1.1
    ChimeraX-Zone: 1.0.1
    colorama: 0.4.5
    comm: 0.1.2
    comtypes: 1.1.10
    contourpy: 1.0.6
    cxservices: 1.2
    cycler: 0.11.0
    Cython: 0.29.32
    debugpy: 1.6.4
    decorator: 5.1.1
    docutils: 0.19
    entrypoints: 0.4
    executing: 1.2.0
    filelock: 3.7.1
    fonttools: 4.38.0
    funcparserlib: 1.0.1
    grako: 3.16.5
    h5py: 3.7.0
    html2text: 2020.1.16
    idna: 3.4
    ihm: 0.35
    imagecodecs: 2022.9.26
    imagesize: 1.4.1
    importlib-metadata: 6.0.0
    ipykernel: 6.19.2
    ipython: 8.7.0
    ipython-genutils: 0.2.0
    jedi: 0.18.2
    Jinja2: 3.1.2
    jupyter-client: 7.4.8
    jupyter-core: 5.1.1
    kiwisolver: 1.4.4
    line-profiler: 3.5.1
    lxml: 4.9.1
    lz4: 4.0.2
    MarkupSafe: 2.1.1
    matplotlib: 3.6.2
    matplotlib-inline: 0.1.6
    msgpack: 1.0.4
    nest-asyncio: 1.5.6
    netCDF4: 1.6.0
    networkx: 2.8.8
    numexpr: 2.8.4
    numpy: 1.23.5
    openvr: 1.23.701
    packaging: 22.0
    ParmEd: 3.4.3
    parso: 0.8.3
    pep517: 0.13.0
    pickleshare: 0.7.5
    Pillow: 9.3.0
    pip: 22.2.2
    pkginfo: 1.8.3
    platformdirs: 2.6.2
    prompt-toolkit: 3.0.36
    psutil: 5.9.4
    pure-eval: 0.2.2
    pycollada: 0.7.2
    pydicom: 2.3.0
    Pygments: 2.12.0
    PyOpenGL: 3.1.5
    PyOpenGL-accelerate: 3.1.5
    pyparsing: 3.0.9
    PyQt6-commercial: 6.4.0
    PyQt6-Qt6: 6.4.1
    PyQt6-sip: 13.4.0
    PyQt6-WebEngine-commercial: 6.4.0
    PyQt6-WebEngine-Qt6: 6.4.1
    python-dateutil: 2.8.2
    pytz: 2022.7
    pywin32: 303
    pyzmq: 24.0.1
    qtconsole: 5.4.0
    QtPy: 2.3.0
    RandomWords: 0.4.0
    requests: 2.28.1
    scipy: 1.9.3
    setuptools: 65.1.1
    sfftk-rw: 0.7.2
    six: 1.16.0
    snowballstemmer: 2.2.0
    sortedcontainers: 2.4.0
    Sphinx: 5.1.1
    sphinx-autodoc-typehints: 1.19.1
    sphinxcontrib-applehelp: 1.0.2
    sphinxcontrib-blockdiag: 3.0.0
    sphinxcontrib-devhelp: 1.0.2
    sphinxcontrib-htmlhelp: 2.0.0
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 1.0.3
    sphinxcontrib-serializinghtml: 1.1.5
    stack-data: 0.6.2
    tables: 3.7.0
    tifffile: 2022.10.10
    tinyarray: 1.2.4
    tomli: 2.0.1
    tornado: 6.2
    traitlets: 5.8.0
    urllib3: 1.26.13
    wcwidth: 0.2.5
    webcolors: 1.12
    wheel: 0.37.1
    wheel-filename: 1.4.1
    WMI: 1.5.1
    zipp: 3.11.0

[pett]

Greg's recent changes to metadata formatting broke this. It worked in 1.5.

[Greg Couch]

Fixed.