Opened 3 years ago

Closed 3 years ago

#7929 closed defect (can't reproduce)

Crash coloring volume, Intel Mac, no C++ stack trace

Reported by: chimerax-bug-report@… Owned by: Tom Goddard
Priority: normal Milestone:
Component: Volume Data Version:
Keywords: Cc:
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description 

The following bug report has been submitted:
Platform:        macOS-10.16-x86_64-i386-64bit
ChimeraX Version: 1.5rc202210282349 (2022-10-28 23:49:04 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
{"app_name":"ChimeraX","timestamp":"2022-10-31 16:10:51.00 -0700","app_version":"","slice_uuid":"5df621ee-554e-36a8-b448-93b2334e5480","build_version":"","platform":1,"share_with_app_devs":1,"is_first_party":1,"bug_type":"309","os_version":"macOS 12.6 (21G115)","incident_id":"E52AA768-5EDE-49D4-864D-1E8129262D79","name":"ChimeraX"}
{
  "uptime" : 21000,
  "procLaunch" : "2022-10-31 16:02:33.4783 -0700",
  "procRole" : "Background",
  "version" : 2,
  "userID" : 501,
  "deployVersion" : 210,
  "modelCode" : "MacBookAir7,2",
  "procStartAbsTime" : 21306091618127,
  "coalitionID" : 3930,
  "osVersion" : {
    "train" : "macOS 12.6",
    "build" : "21G115",
    "releaseType" : "User"
  },
  "captureTime" : "2022-10-31 16:10:51.1129 -0700",
  "incident" : "E52AA768-5EDE-49D4-864D-1E8129262D79",
  "bug_type" : "309",
  "pid" : 6031,
  "procExitAbsTime" : 21803599257194,
  "cpuType" : "X86-64",
  "procName" : "ChimeraX",
  "procPath" : "\/private\/var\/folders\/*\/ChimeraX-1.5-rc2022.10.28.app\/Contents\/MacOS\/ChimeraX",
  "parentProc" : "launchd",
  "parentPid" : 1,
  "coalitionName" : "edu.ucsf.cgl.ChimeraX",
  "crashReporterKey" : "02C801AF-2F90-14FC-8E25-E4B029F08183",
  "sip" : "enabled",
  "vmRegionInfo" : "0x10681ef30 is in 0x10664b000-0x1068b4000;  bytes after start: 1916720  bytes before end: 610511\n      REGION TYPE                    START - END         [ VSIZE] PRT\/MAX SHRMOD  REGION DETAIL\n      VM_ALLOCATE                 10664a000-10664b000    [    4K] rw-\/rwx SM=PRV  \n--->  mapped file                 10664b000-1068b4000    [ 2468K] r-x\/rwx SM=COW  ...t_id=2dc1fe59\n      mapped file                 1068b4000-1068ee000    [  232K] rw-\/rwx SM=COW  ...t_id=2ab40559",
  "isCorpse" : 1,
  "exception" : {"codes":"0x000000000000000a, 0x000000010681ef30","rawCodes":[10,4404145968],"type":"EXC_BAD_ACCESS","signal":"SIGILL","subtype":"KERN_MEMORY_ERROR at 0x000000010681ef30"},
  "termination" : {"flags":0,"code":4,"namespace":"SIGNAL","indicator":"Illegal instruction: 4","byProc":"ChimeraX","byPid":6031},
  "vmregioninfo" : "0x10681ef30 is in 0x10664b000-0x1068b4000;  bytes after start: 1916720  bytes before end: 610511\n      REGION TYPE                    START - END         [ VSIZE] PRT\/MAX SHRMOD  REGION DETAIL\n      VM_ALLOCATE                 10664a000-10664b000    [    4K] rw-\/rwx SM=PRV  \n--->  mapped file                 10664b000-1068b4000    [ 2468K] r-x\/rwx SM=COW  ...t_id=2dc1fe59\n      mapped file                 1068b4000-1068ee000    [  232K] rw-\/rwx SM=COW  ...t_id=2ab40559",
  "extMods" : {"caller":{"thread_create":0,"thread_set_state":0,"task_for_pid":0},"system":{"thread_create":0,"thread_set_state":0,"task_for_pid":0},"targeted":{"thread_create":0,"thread_set_state":0,"task_for_pid":0},"warnings":0},
  "faultingThread" : 0,
  "threads" : [{"triggered":true,"id":178789,"name":"CrBrowserMain","threadState":{"r13":{"value":140211509738592},"rax":{"value":4404145968},"rflags":{"value":66070},"cpu":{"value":1},"r14":{"value":64},"rsi":{"value":140211510143016},"r8":{"value":140211510143120},"cr2":{"value":4404145968},"rdx":{"value":140211510143120},"r10":{"value":4294967040},"r9":{"value":14446441195795013551},"r15":{"value":0},"rbx":{"value":140211510143120},"trap":{"value":14,"description":"(no mapping for user instruction read)"},"err":{"value":20},"r11":{"value":140211509738632},"rip":{"value":4404145968,"matchesCrashFrame":1},"rbp":{"value":140211510141952},"rsp":{"value":140211510141944},"r12":{"value":14446441195795013551},"rcx":{"value":140211510143016},"flavor":"x86_THREAD_STATE","rdi":{"value":10}},"frames":[{"imageOffset":4404145968,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":140703418618802,"imageIndex":0},{"imageOffset":140703418616699,"imageIndex":0},{"imageOffset":140703418613308,"imageIndex":0},{"imageOffset":140703566132710,"imageIndex":0},{"imageOffset":140703566132042,"imageIndex":0},{"imageOffset":140703566131429,"imageIndex":0},{"imageOffset":140703462891437,"imageIndex":0},{"imageOffset":140703462884970,"imageIndex":0},{"imageOffset":140703462829337,"imageIndex":0},{"imageOffset":4599668908,"imageIndex":0},{"imageOffset":4491997990,"imageIndex":0},{"imageOffset":4491960885,"imageIndex":0},{"imageOffset":4505017754,"imageIndex":0},{"imageOffset":4402747165,"imageIndex":0},{"imageOffset":4402488759,"imageIndex":0},{"imageOffset":4403375772,"imageIndex":0},{"imageOffset":4403364514,"imageIndex":0},{"imageOffset":4402490664,"imageIndex":0},{"imageOffset":4402498922,"imageIndex":0},{"imageOffset":4403375628,"imageIndex":0},{"imageOffset":4403364514,"imageIndex":0},{"imageOffset":4403378947,"imageIndex":0},{"imageOffset":4402490545,"imageIndex":0},{"imageOffset":4403375628,"imageIndex":0},{"imageOffset":4403364683,"imageIndex":0},{"imageOffset":4403378947,"imageIndex":0},{"imageOffset":4403338667,"imageIndex":0},{"imageOffset":4403325970,"imageIndex":0},{"imageOffset":4402745379,"imageIndex":0},{"imageOffset":4403375628,"imageIndex":0},{"imageOffset":4403364683,"imageIndex":0},{"imageOffset":4403378947,"imageIndex":0},{"imageOffset":4402490545,"imageIndex":0},{"imageOffset":4403375628,"imageIndex":0},{"imageOffset":4403364683,"imageIndex":0},{"imageOffset":4403378947,"imageIndex":0},{"imageOffset":4402490545,"imageIndex":0},{"imageOffset":4403796080,"imageIndex":0},{"imageOffset":4403793799,"imageIndex":0},{"imageOffset":4403795343,"imageIndex":0},{"imageOffset":4403795099,"imageIndex":0},{"imageOffset":4393606600,"imageIndex":0},{"imageOffset":21806,"symbol":"start","symbolLocation":462,"imageIndex":1}]},{"id":179868,"name":"ThreadPoolServiceThread","frames":[{"imageOffset":140703417596106,"imageIndex":0},{"imageOffset":5065046311,"imageIndex":0},{"imageOffset":5064510044,"imageIndex":0},{"imageOffset":5064214936,"imageIndex":0},{"imageOffset":5064650424,"imageIndex":0},{"imageOffset":5064549037,"imageIndex":0},{"imageOffset":5064650826,"imageIndex":0},{"imageOffset":5064812808,"imageIndex":0},{"imageOffset":140703417808097,"imageIndex":0},{"imageOffset":140703417790315,"imageIndex":0}]},{"id":179870,"name":"ThreadPoolBackgroundWorker","frames":[{"imageOffset":140703417559418,"imageIndex":0},{"imageOffset":140703417560296,"imageIndex":0},{"imageOffset":5064842790,"imageIndex":0},{"imageOffset":5064599487,"imageIndex":0},{"imageOffset":5064602220,"imageIndex":0},{"imageOffset":5064601053,"imageIndex":0},{"imageOffset":5064812808,"imageIndex":0},{"imageOffset":140703417808097,"imageIndex":0},{"imageOffset":140703417790315,"imageIndex":0}]},{"id":179871,"name":"Chrome_IOThread","frames":[{"imageOffset":140703417596106,"imageIndex":0},{"imageOffset":5065046311,"imageIndex":0},{"imageOffset":5064510044,"imageIndex":0},{"imageOffset":5064214936,"imageIndex":0},{"imageOffset":5064650424,"imageIndex":0},{"imageOffset":5046977442,"imageIndex":0},{"imageOffset":5064650826,"imageIndex":0},{"imageOffset":5064812808,"imageIndex":0},{"imageOffset":140703417808097,"imageIndex":0},{"imageOffset":140703417790315,"imageIndex":0}]},{"id":179872,"name":"NetworkConfigWatcher","frames":[{"imageOffset":140703417559418,"imageIndex":0},{"imageOffset":140703417560296,"imageIndex":0},{"imageOffset":5064842790,"imageIndex":0},{"imageOffset":5064842223,"imageIndex":0},{"imageOffset":5064012233,"imageIndex":0},{"imageOffset":5064510044,"imageIndex":0},{"imageOffset":5064214936,"imageIndex":0},{"imageOffset":5064650424,"imageIndex":0},{"imageOffset":5064650826,"imageIndex":0},{"imageOffset":5064812808,"imageIndex":0},{"imageOffset":140703417808097,"imageIndex":0},{"imageOffset":140703417790315,"imageIndex":0}]},{"id":179873,"name":"ThreadPoolForegroundWorker","frames":[{"imageOffset":140703417559418,"imageIndex":0},{"imageOffset":140703417560296,"imageIndex":0},{"imageOffset":5064842790,"imageIndex":0},{"imageOffset":5064599487,"imageIndex":0},{"imageOffset":5064602220,"imageIndex":0},{"imageOffset":5064601197,"imageIndex":0},{"imageOffset":5064812808,"imageIndex":0},{"imageOffset":140703417808097,"imageIndex":0},{"imageOffset":140703417790315,"imageIndex":0}]},{"id":179876,"name":"CompositorTileWorker1","frames":[{"imageOffset":140703417570282,"imageIndex":0},{"imageOffset":5064809755,"imageIndex":0},{"imageOffset":5099206957,"imageIndex":0},{"imageOffset":5064812808,"imageIndex":0},{"imageOffset":140703417808097,"imageIndex":0},{"imageOffset":140703417790315,"imageIndex":0}]},{"id":179877,"name":"Chrome_InProcGpuThread","frames":[{"imageOffset":140703417559418,"imageIndex":0},{"imageOffset":140703417560296,"imageIndex":0},{"imageOffset":5064842790,"imageIndex":0},{"imageOffset":5064842223,"imageIndex":0},{"imageOffset":5064012233,"imageIndex":0},{"imageOffset":5064510044,"imageIndex":0},{"imageOffset":5064214936,"imageIndex":0},{"imageOffset":5064650424,"imageIndex":0},{"imageOffset":5064650826,"imageIndex":0},{"imageOffset":5064812808,"imageIndex":0},{"imageOffset":140703417808097,"imageIndex":0},{"imageOffset":140703417790315,"imageIndex":0}]},{"id":179878,"name":"Chrome_ChildIOThread","frames":[{"imageOffset":140703417596106,"imageIndex":0},{"imageOffset":5065046311,"imageIndex":0},{"imageOffset":5064510044,"imageIndex":0},{"imageOffset":5064214936,"imageIndex":0},{"imageOffset":5064650424,"imageIndex":0},{"imageOffset":5064650826,"imageIndex":0},{"imageOffset":5064812808,"imageIndex":0},{"imageOffset":140703417808097,"imageIndex":0},{"imageOffset":140703417790315,"imageIndex":0}]},{"id":179879,"name":"NetworkConfigWatcher","frames":[{"imageOffset":140703417559418,"imageIndex":0},{"imageOffset":140703417560296,"imageIndex":0},{"imageOffset":5064842790,"imageIndex":0},{"imageOffset":5064842223,"imageIndex":0},{"imageOffset":5064012233,"imageIndex":0},{"imageOffset":5064510044,"imageIndex":0},{"imageOffset":5064214936,"imageIndex":0},{"imageOffset":5064650424,"imageIndex":0},{"imageOffset":5064650826,"imageIndex":0},{"imageOffset":5064812808,"imageIndex":0},{"imageOffset":140703417808097,"imageIndex":0},{"imageOffset":140703417790315,"imageIndex":0}]},{"id":179880,"name":"VizCompositorThread","frames":[{"imageOffset":140703417559418,"imageIndex":0},{"imageOffset":140703417560296,"imageIndex":0},{"imageOffset":5064842790,"imageIndex":0},{"imageOffset":5064842223,"imageIndex":0},{"imageOffset":5064012233,"imageIndex":0},{"imageOffset":5064510044,"imageIndex":0},{"imageOffset":5064214936,"imageIndex":0},{"imageOffset":5064650424,"imageIndex":0},{"imageOffset":5064650826,"imageIndex":0},{"imageOffset":5064812808,"imageIndex":0},{"imageOffset":140703417808097,"imageIndex":0},{"imageOffset":140703417790315,"imageIndex":0}]},{"id":179891,"name":"NetworkService","frames":[{"imageOffset":140703417596106,"imageIndex":0},{"imageOffset":5065046311,"imageIndex":0},{"imageOffset":5064510044,"imageIndex":0},{"imageOffset":5064214936,"imageIndex":0},{"imageOffset":5064650424,"imageIndex":0},{"imageOffset":5064650826,"imageIndex":0},{"imageOffset":5064812808,"imageIndex":0},{"imageOffset":140703417808097,"imageIndex":0},{"imageOffset":140703417790315,"imageIndex":0}]},{"id":179892,"name":"NetworkConfigWatcher","frames":[{"imageOffset":140703417559418,"imageIndex":0},{"imageOffset":140703417560296,"imageIndex":0},{"imageOffset":5064842790,"imageIndex":0},{"imageOffset":5064842223,"imageIndex":0},{"imageOffset":5064012233,"imageIndex":0},{"imageOffset":5064510044,"imageIndex":0},{"imageOffset":5064214936,"imageIndex":0},{"imageOffset":5064650424,"imageIndex":0},{"imageOffset":5064650826,"imageIndex":0},{"imageOffset":5064812808,"imageIndex":0},{"imageOffset":140703417808097,"imageIndex":0},{"imageOffset":140703417790315,"imageIndex":0}]},{"id":179893,"name":"ThreadPoolSingleThreadForegroundBlocking0","frames":[{"imageOffset":140703417559418,"imageIndex":0},{"imageOffset":140703417560296,"imageIndex":0},{"imageOffset":5064842790,"imageIndex":0},{"imageOffset":5064599487,"imageIndex":0},{"imageOffset":5064602220,"imageIndex":0},{"imageOffset":5064601293,"imageIndex":0},{"imageOffset":5064812808,"imageIndex":0},{"imageOffset":140703417808097,"imageIndex":0},{"imageOffset":140703417790315,"imageIndex":0}]},{"id":179948,"name":"NetworkConfigWatcher","frames":[{"imageOffset":140703417559418,"imageIndex":0},{"imageOffset":140703417560296,"imageIndex":0},{"imageOffset":5064842790,"imageIndex":0},{"imageOffset":5064842223,"imageIndex":0},{"imageOffset":5064012233,"imageIndex":0},{"imageOffset":5064510044,"imageIndex":0},{"imageOffset":5064214936,"imageIndex":0},{"imageOffset":5064650424,"imageIndex":0},{"imageOffset":5064650826,"imageIndex":0},{"imageOffset":5064812808,"imageIndex":0},{"imageOffset":140703417808097,"imageIndex":0},{"imageOffset":140703417790315,"imageIndex":0}]},{"id":179973,"frames":[{"imageOffset":140703417570282,"imageIndex":0},{"imageOffset":4403730086,"imageIndex":0},{"imageOffset":4411610494,"imageIndex":0},{"imageOffset":4411609382,"imageIndex":0},{"imageOffset":4402745533,"imageIndex":0},{"imageOffset":4403375628,"imageIndex":0},{"imageOffset":4403364683,"imageIndex":0},{"imageOffset":4403378947,"imageIndex":0},{"imageOffset":4402490545,"imageIndex":0},{"imageOffset":4403366281,"imageIndex":0},{"imageOffset":4402490664,"imageIndex":0},{"imageOffset":4403375628,"imageIndex":0},{"imageOffset":4403364478,"imageIndex":0},{"imageOffset":4402490664,"imageIndex":0},{"imageOffset":4403375628,"imageIndex":0},{"imageOffset":4403364478,"imageIndex":0},{"imageOffset":4402490664,"imageIndex":0},{"imageOffset":4402498994,"imageIndex":0},{"imageOffset":4404052038,"imageIndex":0},{"imageOffset":4403729145,"imageIndex":0},{"imageOffset":140703417808097,"imageIndex":0},{"imageOffset":140703417790315,"imageIndex":0}]},{"id":179974,"frames":[{"imageOffset":140703417570282,"imageIndex":0},{"imageOffset":4403730086,"imageIndex":0},{"imageOffset":4411610494,"imageIndex":0},{"imageOffset":4411609382,"imageIndex":0},{"imageOffset":4402745533,"imageIndex":0},{"imageOffset":4403375628,"imageIndex":0},{"imageOffset":4403364683,"imageIndex":0},{"imageOffset":4403378947,"imageIndex":0},{"imageOffset":4402490545,"imageIndex":0},{"imageOffset":4403366281,"imageIndex":0},{"imageOffset":4402490664,"imageIndex":0},{"imageOffset":4403375628,"imageIndex":0},{"imageOffset":4403364478,"imageIndex":0},{"imageOffset":4402490664,"imageIndex":0},{"imageOffset":4403375628,"imageIndex":0},{"imageOffset":4403364478,"imageIndex":0},{"imageOffset":4402490664,"imageIndex":0},{"imageOffset":4402498994,"imageIndex":0},{"imageOffset":4404052038,"imageIndex":0},{"imageOffset":4403729145,"imageIndex":0},{"imageOffset":140703417808097,"imageIndex":0},{"imageOffset":140703417790315,"imageIndex":0}]},{"id":179975,"frames":[{"imageOffset":140703417570282,"imageIndex":0},{"imageOffset":4403730086,"imageIndex":0},{"imageOffset":4411610494,"imageIndex":0},{"imageOffset":4411609382,"imageIndex":0},{"imageOffset":4402745533,"imageIndex":0},{"imageOffset":4403375628,"imageIndex":0},{"imageOffset":4403364683,"imageIndex":0},{"imageOffset":4403378947,"imageIndex":0},{"imageOffset":4402490545,"imageIndex":0},{"imageOffset":4403366281,"imageIndex":0},{"imageOffset":4402490664,"imageIndex":0},{"imageOffset":4403375628,"imageIndex":0},{"imageOffset":4403364478,"imageIndex":0},{"imageOffset":4402490664,"imageIndex":0},{"imageOffset":4403375628,"imageIndex":0},{"imageOffset":4403364478,"imageIndex":0},{"imageOffset":4402490664,"imageIndex":0},{"imageOffset":4402498994,"imageIndex":0},{"imageOffset":4404052038,"imageIndex":0},{"imageOffset":4403729145,"imageIndex":0},{"imageOffset":140703417808097,"imageIndex":0},{"imageOffset":140703417790315,"imageIndex":0}]},{"id":179976,"frames":[{"imageOffset":140703417570282,"imageIndex":0},{"imageOffset":4403730086,"imageIndex":0},{"imageOffset":4411610494,"imageIndex":0},{"imageOffset":4411609382,"imageIndex":0},{"imageOffset":4402745533,"imageIndex":0},{"imageOffset":4403375628,"imageIndex":0},{"imageOffset":4403364683,"imageIndex":0},{"imageOffset":4403378947,"imageIndex":0},{"imageOffset":4402490545,"imageIndex":0},{"imageOffset":4403366281,"imageIndex":0},{"imageOffset":4402490664,"imageIndex":0},{"imageOffset":4403375628,"imageIndex":0},{"imageOffset":4403364478,"imageIndex":0},{"imageOffset":4402490664,"imageIndex":0},{"imageOffset":4403375628,"imageIndex":0},{"imageOffset":4403364478,"imageIndex":0},{"imageOffset":4402490664,"imageIndex":0},{"imageOffset":4402498994,"imageIndex":0},{"imageOffset":4404052038,"imageIndex":0},{"imageOffset":4403729145,"imageIndex":0},{"imageOffset":140703417808097,"imageIndex":0},{"imageOffset":140703417790315,"imageIndex":0}]},{"id":179977,"frames":[{"imageOffset":140703417585834,"imageIndex":0},{"imageOffset":4402524934,"imageIndex":0},{"imageOffset":4403375628,"imageIndex":0},{"imageOffset":4403364478,"imageIndex":0},{"imageOffset":4403378947,"imageIndex":0},{"imageOffset":4402490545,"imageIndex":0},{"imageOffset":4403375628,"imageIndex":0},{"imageOffset":4403364478,"imageIndex":0},{"imageOffset":4403378947,"imageIndex":0},{"imageOffset":4402490545,"imageIndex":0},{"imageOffset":4403375628,"imageIndex":0},{"imageOffset":4403364840,"imageIndex":0},{"imageOffset":4403378947,"imageIndex":0},{"imageOffset":4402490545,"imageIndex":0},{"imageOffset":4403375628,"imageIndex":0},{"imageOffset":4403364514,"imageIndex":0},{"imageOffset":4402490664,"imageIndex":0},{"imageOffset":4402499161,"imageIndex":0},{"imageOffset":4403366281,"imageIndex":0},{"imageOffset":4402490664,"imageIndex":0},{"imageOffset":4403375628,"imageIndex":0},{"imageOffset":4403364478,"imageIndex":0},{"imageOffset":4402490664,"imageIndex":0},{"imageOffset":4403375628,"imageIndex":0},{"imageOffset":4403364478,"imageIndex":0},{"imageOffset":4402490664,"imageIndex":0},{"imageOffset":4402498994,"imageIndex":0},{"imageOffset":4404052038,"imageIndex":0},{"imageOffset":4403729145,"imageIndex":0},{"imageOffset":140703417808097,"imageIndex":0},{"imageOffset":140703417790315,"imageIndex":0}]},{"id":179978,"frames":[{"imageOffset":140703417570282,"imageIndex":0},{"imageOffset":4403730086,"imageIndex":0},{"imageOffset":4411610494,"imageIndex":0},{"imageOffset":4411609382,"imageIndex":0},{"imageOffset":4402745533,"imageIndex":0},{"imageOffset":4402605146,"imageIndex":0},{"imageOffset":4403362750,"imageIndex":0},{"imageOffset":4402490664,"imageIndex":0},{"imageOffset":4403366281,"imageIndex":0},{"imageOffset":4402490664,"imageIndex":0},{"imageOffset":4403375628,"imageIndex":0},{"imageOffset":4403364478,"imageIndex":0},{"imageOffset":4402490664,"imageIndex":0},{"imageOffset":4403375628,"imageIndex":0},{"imageOffset":4403364478,"imageIndex":0},{"imageOffset":4402490664,"imageIndex":0},{"imageOffset":4402498994,"imageIndex":0},{"imageOffset":4404052038,"imageIndex":0},{"imageOffset":4403729145,"imageIndex":0},{"imageOffset":140703417808097,"imageIndex":0},{"imageOffset":140703417790315,"imageIndex":0}]},{"id":179979,"frames":[{"imageOffset":140703417570282,"imageIndex":0},{"imageOffset":4403730086,"imageIndex":0},{"imageOffset":4411610494,"imageIndex":0},{"imageOffset":4411609382,"imageIndex":0},{"imageOffset":4402745533,"imageIndex":0},{"imageOffset":4403375628,"imageIndex":0},{"imageOffset":4403364683,"imageIndex":0},{"imageOffset":4402490664,"imageIndex":0},{"imageOffset":4403366281,"imageIndex":0},{"imageOffset":4402490664,"imageIndex":0},{"imageOffset":4403375628,"imageIndex":0},{"imageOffset":4403364478,"imageIndex":0},{"imageOffset":4402490664,"imageIndex":0},{"imageOffset":4403375628,"imageIndex":0},{"imageOffset":4403364478,"imageIndex":0},{"imageOffset":4402490664,"imageIndex":0},{"imageOffset":4402498994,"imageIndex":0},{"imageOffset":4404052038,"imageIndex":0},{"imageOffset":4403729145,"imageIndex":0},{"imageOffset":140703417808097,"imageIndex":0},{"imageOffset":140703417790315,"imageIndex":0}]},{"id":180027,"name":"com.apple.NSEventThread","frames":[{"imageOffset":140703417559418,"imageIndex":0},{"imageOffset":140703417560296,"imageIndex":0},{"imageOffset":140703418622829,"imageIndex":0},{"imageOffset":140703418616312,"imageIndex":0},{"imageOffset":140703418613308,"imageIndex":0},{"imageOffset":140703464389070,"imageIndex":0},{"imageOffset":140703417808097,"imageIndex":0},{"imageOffset":140703417790315,"imageIndex":0}]},{"id":180116,"name":"MemoryInfra","frames":[{"imageOffset":140703417559418,"imageIndex":0},{"imageOffset":140703417560296,"imageIndex":0},{"imageOffset":5064842790,"imageIndex":0},{"imageOffset":5064842223,"imageIndex":0},{"imageOffset":5064012233,"imageIndex":0},{"imageOffset":5064510044,"imageIndex":0},{"imageOffset":5064214936,"imageIndex":0},{"imageOffset":5064650424,"imageIndex":0},{"imageOffset":5064650826,"imageIndex":0},{"imageOffset":5064812808,"imageIndex":0},{"imageOffset":140703417808097,"imageIndex":0},{"imageOffset":140703417790315,"imageIndex":0}]},{"id":180117,"name":"ThreadPoolSingleThreadSharedBackgroundBlocking1","frames":[{"imageOffset":140703417559418,"imageIndex":0},{"imageOffset":140703417560296,"imageIndex":0},{"imageOffset":5064842790,"imageIndex":0},{"imageOffset":5064599487,"imageIndex":0},{"imageOffset":5064601498,"imageIndex":0},{"imageOffset":5064601101,"imageIndex":0},{"imageOffset":5064812808,"imageIndex":0},{"imageOffset":140703417808097,"imageIndex":0},{"imageOffset":140703417790315,"imageIndex":0}]},{"id":180997,"frames":[{"imageOffset":140703417570282,"imageIndex":0},{"imageOffset":4514533951,"imageIndex":0},{"imageOffset":140703417808097,"imageIndex":0},{"imageOffset":140703417790315,"imageIndex":0}]},{"id":183737,"frames":[{"imageOffset":140703417790280,"imageIndex":0}]}],
  "usedImages" : [
  {
    "size" : 0,
    "source" : "A",
    "base" : 0,
    "uuid" : "00000000-0000-0000-0000-000000000000"
  },
  {
    "source" : "P",
    "arch" : "x86_64",
    "base" : 4600549376,
    "size" : 442368,
    "uuid" : "71febccd-d9dc-3599-9971-2b3407c588a8",
    "path" : "\/usr\/lib\/dyld",
    "name" : "dyld"
  }
],
  "sharedCache" : {
  "base" : 140703414525952,
  "size" : 19331678208,
  "uuid" : "73669942-bd8a-3e40-951f-7fbe07b51cb8"
},
  "vmSummary" : "ReadOnly portion of Libraries: Total=628K resident=0K(0%) swapped_out_or_unallocated=628K(100%)\nWritable regions: Total=657.4M written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=657.4M(100%)\n\n                                VIRTUAL   REGION \nREGION TYPE                        SIZE    COUNT (non-coalesced) \n===========                     =======  ======= \nAccelerate framework               384K        3 \nActivity Tracing                   256K        1 \nCG backing stores                  960K        4 \nCG image                           308K       31 \nColorSync                          236K       28 \nCoreAnimation                      824K       70 \nCoreGraphics                        12K        2 \nCoreUI image data                 2544K       38 \nDispatch continuations            32.0M        1 \nFoundation                          36K        2 \nKernel Alloc Once                    8K        1 \nMALLOC                           238.2M      527 \nMALLOC guard page                   32K        7 \nMALLOC_LARGE (reserved)            384K        1         reserved VM address space (unallocated)\nMach message                        16K        3 \nOpenGL GLSL                        384K        4 \nSTACK GUARD                        104K       26 \nStack                            249.7M       27 \nStack Guard                       56.0M        1 \nVM_ALLOCATE                      132.1M      177 \nVM_ALLOCATE (reserved)              28K        2         reserved VM address space (unallocated)\n__DATA                              16K        1 \n__DATA_CONST                        80K        1 \n__LINKEDIT                         208K        2 \n__TEXT                             432K        1 \ndyld private memory               1184K        3 \nmapped file                      530.2M      442 \nshared memory                     4788K       35 \n===========                     =======  ======= \nTOTAL                              1.2G     1441 \nTOTAL, minus reserved VM space     1.2G     1441 \n",
  "legacyInfo" : {
  "threadTriggered" : {
    "name" : "CrBrowserMain"
  }
},
  "trialInfo" : {
  "rollouts" : [
    {
      "rolloutId" : "60f8ddccefea4203d95cbeef",
      "factorPackIds" : {

      },
      "deploymentId" : 240000021
    },
    {
      "rolloutId" : "5ffde50ce2aacd000d47a95f",
      "factorPackIds" : {

      },
      "deploymentId" : 240000211
    }
  ],
  "experiments" : [

  ]
}
}
===== Log before crash start =====
Startup Messages  
---  
note | available bundle cache has not been initialized yet  
  
You can double click a model's Name or ID in the model panel to edit those
fields  
UCSF ChimeraX version: 1.5rc202210282349 (2022-10-28)  
© 2016-2022 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> view # clip false

Expected an objects specifier or a view name or a keyword  

> open /Users/sucharitasarkar/Library/CloudStorage/OneDrive-
> ScrippsResearch/Work/EM_Training/T20S_tutorial_cryosparc/cryosparc_P233_J16_class_00_final_volume.mrc

Opened cryosparc_P233_J16_class_00_final_volume.mrc as #1, grid size
128,128,128, pixel 2.26, shown at level 0.161, step 1, values float32  

> set bgColor #01010100

> set bgColor #97979700

> set bgColor #cccccc00

> set bgColor #e8e8e800

> set bgColor #f7f7f700

> set bgColor #f9f9f900

> set bgColor #fbfbfb00

> set bgColor #fcfcfc00

> set bgColor #ffffff00

> set bgColor #fefefe00

> set bgColor #dfdfdf00

> set bgColor #a8a8a800

> set bgColor #47474700

> set bgColor #1b1b1b00

> set bgColor #0b0b0b00

> set bgColor #06060600

> set bgColor #03030300

> set bgColor #01010100

> set bgColor transparent

> volume #1 showOutlineBox true

> volume #1 showOutlineBox false

> volume #1 showOutlineBox true

> volume #1 level 0.1268

> color #1 #86b6bfff models

> color #1 #bc97bfff models

> color #1 #a99bbfff models

> color #1 #bf97b2ff models

> show target m

> view clip false

> select add #1

2 models selected  

> select subtract #1

Nothing selected  

> volume #1 style image

> volume #1 style surface

> volume #1 style mesh

> volume #1 style image

> volume #1 style surface

Color zone shortcut requires 1 displayed atomic model and 1 map, got 0 atomic
models, 1 maps.  

> volume #1 change image level -4.942e-05,0 level 0.1609,0.8 level 0.4054,1

> volume #1 level 0.1066

> lighting soft

> lighting full

> lighting soft

> volume #1 color #70a3cb


===== Log before crash end =====

Log:
UCSF ChimeraX version: 1.5rc202210282349 (2022-10-28)  
© 2016-2022 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  




OpenGL version: 4.1 INTEL-18.8.5
OpenGL renderer: Intel(R) HD Graphics 6000
OpenGL vendor: Intel Inc.

Python: 3.9.11
Locale: UTF-8
Qt version: PyQt6 6.3.1, Qt 6.3.1
Qt runtime version: 6.3.2
Qt platform: cocoa
Hardware:

    Hardware Overview:

      Model Name: MacBook Air
      Model Identifier: MacBookAir7,2
      Processor Name: Dual-Core Intel Core i7
      Processor Speed: 2.2 GHz
      Number of Processors: 1
      Total Number of Cores: 2
      L2 Cache (per Core): 256 KB
      L3 Cache: 4 MB
      Hyper-Threading Technology: Enabled
      Memory: 8 GB
      System Firmware Version: 430.140.3.0.0
      OS Loader Version: 540.120.3~22
      SMC Version (system): 2.27f2

Software:

    System Software Overview:

      System Version: macOS 12.6 (21G115)
      Kernel Version: Darwin 21.6.0
      Time since boot: 13 minutes

Graphics/Displays:

    Intel HD Graphics 6000:

      Chipset Model: Intel HD Graphics 6000
      Type: GPU
      Bus: Built-In
      VRAM (Dynamic, Max): 1536 MB
      Vendor: Intel
      Device ID: 0x1626
      Revision ID: 0x0009
      Metal Family: Supported, Metal GPUFamily macOS 1
      Displays:
        Color LCD:
          Display Type: LCD
          Resolution: 2560 x 1440 (QHD/WQHD - Wide Quad High Definition)
          UI Looks like: 2560 x 1440
          Framebuffer Depth: 24-Bit Color (ARGB8888)
          Mirror: On
          Mirror Status: Hardware Mirror
          Online: Yes
          Automatically Adjust Brightness: Yes
          Connection Type: Internal
        LED Cinema Display:
          Display Type: LCD
          Resolution: 2560 x 1440 (QHD/WQHD - Wide Quad High Definition)
          UI Looks like: 2560 x 1440
          Framebuffer Depth: 24-Bit Color (ARGB8888)
          Display Serial Number: W83201D16JL 
          Main Display: Yes
          Mirror: On
          Mirror Status: Master Mirror
          Online: Yes
          Rotation: Supported
          Automatically Adjust Brightness: No
          Connection Type: Thunderbolt/DisplayPort


Installed Packages:
    alabaster: 0.7.12
    appdirs: 1.4.4
    appnope: 0.1.3
    asttokens: 2.1.0
    Babel: 2.10.3
    backcall: 0.2.0
    blockdiag: 3.0.0
    build: 0.8.0
    certifi: 2021.10.8
    cftime: 1.6.2
    charset-normalizer: 2.1.1
    ChimeraX-AddCharge: 1.4
    ChimeraX-AddH: 2.2.1
    ChimeraX-AlignmentAlgorithms: 2.0
    ChimeraX-AlignmentHdrs: 3.2.1
    ChimeraX-AlignmentMatrices: 2.0
    ChimeraX-Alignments: 2.6
    ChimeraX-AlphaFold: 1.0
    ChimeraX-AltlocExplorer: 1.0.3
    ChimeraX-AmberInfo: 1.0
    ChimeraX-Arrays: 1.0
    ChimeraX-Atomic: 1.41.4
    ChimeraX-AtomicLibrary: 8.0.3
    ChimeraX-AtomSearch: 2.0.1
    ChimeraX-AxesPlanes: 2.3
    ChimeraX-BasicActions: 1.1.2
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 2.1.2
    ChimeraX-BondRot: 2.0.1
    ChimeraX-BugReporter: 1.0.1
    ChimeraX-BuildStructure: 2.7.1
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.2
    ChimeraX-ButtonPanel: 1.0.1
    ChimeraX-CageBuilder: 1.0.1
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.3.1
    ChimeraX-ChangeChains: 1.0.2
    ChimeraX-CheckWaters: 1.3
    ChimeraX-ChemGroup: 2.0
    ChimeraX-Clashes: 2.2.4
    ChimeraX-ColorActions: 1.0.3
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-ColorKey: 1.5.2
    ChimeraX-CommandLine: 1.2.4
    ChimeraX-ConnectStructure: 2.0.1
    ChimeraX-Contacts: 1.0.1
    ChimeraX-Core: 1.5rc202210282349
    ChimeraX-CoreFormats: 1.1
    ChimeraX-coulombic: 1.3.2
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-CrystalContacts: 1.0.1
    ChimeraX-DataFormats: 1.2.2
    ChimeraX-Dicom: 1.1
    ChimeraX-DistMonitor: 1.3
    ChimeraX-DockPrep: 1.0
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ExperimentalCommands: 1.0
    ChimeraX-FileHistory: 1.0.1
    ChimeraX-FunctionKey: 1.0.1
    ChimeraX-Geometry: 1.2
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.1
    ChimeraX-Hbonds: 2.4
    ChimeraX-Help: 1.2.1
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.1
    ChimeraX-ImageFormats: 1.2
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0.1
    ChimeraX-ItemsInspection: 1.0.1
    ChimeraX-Label: 1.1.7
    ChimeraX-ListInfo: 1.1.1
    ChimeraX-Log: 1.1.5
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Maestro: 1.8.2
    ChimeraX-Map: 1.1.2
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0.1
    ChimeraX-MapFilter: 2.0
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.1.1
    ChimeraX-Markers: 1.0.1
    ChimeraX-Mask: 1.0.1
    ChimeraX-MatchMaker: 2.0.9
    ChimeraX-MDcrds: 2.6
    ChimeraX-MedicalToolbar: 1.0.2
    ChimeraX-Meeting: 1.0.1
    ChimeraX-MLP: 1.1
    ChimeraX-mmCIF: 2.8
    ChimeraX-MMTF: 2.2
    ChimeraX-Modeller: 1.5.6
    ChimeraX-ModelPanel: 1.3.6
    ChimeraX-ModelSeries: 1.0.1
    ChimeraX-Mol2: 2.0
    ChimeraX-Mole: 1.0
    ChimeraX-Morph: 1.0.1
    ChimeraX-MouseModes: 1.1.1
    ChimeraX-Movie: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nucleotides: 2.0.3
    ChimeraX-OpenCommand: 1.9.1
    ChimeraX-PDB: 2.6.8
    ChimeraX-PDBBio: 1.0
    ChimeraX-PDBLibrary: 1.0.2
    ChimeraX-PDBMatrices: 1.0
    ChimeraX-PickBlobs: 1.0.1
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.1
    ChimeraX-PubChem: 2.1
    ChimeraX-ReadPbonds: 1.0.1
    ChimeraX-Registration: 1.1.1
    ChimeraX-RemoteControl: 1.0
    ChimeraX-RenumberResidues: 1.1
    ChimeraX-ResidueFit: 1.0.1
    ChimeraX-RestServer: 1.1
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 2.0.1
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.5.1
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0
    ChimeraX-SelInspector: 1.0
    ChimeraX-SeqView: 2.7.2
    ChimeraX-Shape: 1.0.1
    ChimeraX-Shell: 1.0.1
    ChimeraX-Shortcuts: 1.1.1
    ChimeraX-ShowSequences: 1.0.1
    ChimeraX-SideView: 1.0.1
    ChimeraX-Smiles: 2.1
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.10
    ChimeraX-STL: 1.0
    ChimeraX-Storm: 1.0
    ChimeraX-StructMeasure: 1.1
    ChimeraX-Struts: 1.0.1
    ChimeraX-Surface: 1.0
    ChimeraX-SwapAA: 2.0.1
    ChimeraX-SwapRes: 2.1.3
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.1.2
    ChimeraX-ToolshedUtils: 1.2.1
    ChimeraX-Tug: 1.0.1
    ChimeraX-UI: 1.24.3
    ChimeraX-uniprot: 2.2.1
    ChimeraX-UnitCell: 1.0.1
    ChimeraX-ViewDockX: 1.1.4
    ChimeraX-VIPERdb: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0.1
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0.1
    ChimeraX-WebServices: 1.1.0
    ChimeraX-Zone: 1.0.1
    colorama: 0.4.5
    cxservices: 1.2
    cycler: 0.11.0
    Cython: 0.29.32
    debugpy: 1.6.3
    decorator: 5.1.1
    docutils: 0.19
    entrypoints: 0.4
    executing: 1.2.0
    filelock: 3.7.1
    fonttools: 4.38.0
    funcparserlib: 1.0.0
    grako: 3.16.5
    h5py: 3.7.0
    html2text: 2020.1.16
    idna: 3.4
    ihm: 0.33
    imagecodecs: 2022.7.31
    imagesize: 1.4.1
    importlib-metadata: 5.0.0
    ipykernel: 6.15.3
    ipython: 8.4.0
    ipython-genutils: 0.2.0
    jedi: 0.18.1
    Jinja2: 3.1.2
    jupyter-client: 7.3.4
    jupyter-core: 4.11.2
    kiwisolver: 1.4.4
    line-profiler: 3.5.1
    lxml: 4.9.1
    lz4: 4.0.2
    MarkupSafe: 2.1.1
    matplotlib: 3.5.2
    matplotlib-inline: 0.1.6
    msgpack: 1.0.4
    nest-asyncio: 1.5.6
    netCDF4: 1.6.0
    networkx: 2.8.5
    numexpr: 2.8.4
    numpy: 1.23.1
    openvr: 1.23.701
    packaging: 21.3
    ParmEd: 3.4.3
    parso: 0.8.3
    pep517: 0.13.0
    pexpect: 4.8.0
    pickleshare: 0.7.5
    Pillow: 9.2.0
    pip: 22.2.2
    pkginfo: 1.8.3
    prompt-toolkit: 3.0.31
    psutil: 5.9.1
    ptyprocess: 0.7.0
    pure-eval: 0.2.2
    pycollada: 0.7.2
    pydicom: 2.3.0
    Pygments: 2.12.0
    PyOpenGL: 3.1.5
    PyOpenGL-accelerate: 3.1.5
    pyparsing: 3.0.9
    PyQt6-commercial: 6.3.1
    PyQt6-Qt6: 6.3.2
    PyQt6-sip: 13.4.0
    PyQt6-WebEngine-commercial: 6.3.1
    PyQt6-WebEngine-Qt6: 6.3.2
    python-dateutil: 2.8.2
    pytz: 2022.5
    pyzmq: 24.0.1
    qtconsole: 5.3.1
    QtPy: 2.2.1
    RandomWords: 0.4.0
    requests: 2.28.1
    scipy: 1.9.0
    setuptools: 65.1.1
    setuptools-scm: 7.0.5
    sfftk-rw: 0.7.2
    six: 1.16.0
    snowballstemmer: 2.2.0
    sortedcontainers: 2.4.0
    Sphinx: 5.1.1
    sphinx-autodoc-typehints: 1.19.1
    sphinxcontrib-applehelp: 1.0.2
    sphinxcontrib-blockdiag: 3.0.0
    sphinxcontrib-devhelp: 1.0.2
    sphinxcontrib-htmlhelp: 2.0.0
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 1.0.3
    sphinxcontrib-serializinghtml: 1.1.5
    stack-data: 0.6.0
    tables: 3.7.0
    tifffile: 2022.7.31
    tinyarray: 1.2.4
    tomli: 2.0.1
    tornado: 6.2
    traitlets: 5.3.0
    typing-extensions: 4.4.0
    urllib3: 1.26.12
    wcwidth: 0.2.5
    webcolors: 1.12
    wheel: 0.37.1
    wheel-filename: 1.4.1
    zipp: 3.10.0

Change History (2)

comment:1 by pett, 3 years ago

Component: Unassigned → Volume Data
Owner: set to Tom Goddard
Platform: → all
Project: → ChimeraX
Status: new → assigned
Summary: ChimeraX bug report submission → Crash coloring volume?

Run out of .dmg

comment:2 by Tom Goddard, 3 years ago

Resolution: → can't reproduce
Status: assigned → closed
Summary: Crash coloring volume? → Crash coloring volume, Intel Mac, no C++ stack trace

Possible Intel graphics driver crash. No stack symbols, so nothing to go on. Map being colored was small, 128 by 128 by 128.

Note: See TracTickets for help on using tickets.