Opened 3 years ago

Closed 3 years ago

#7841 closed defect (can't reproduce)

Crash using File→Open on Windows and/or in return statement

Reported by: chimerax-bug-report@… Owned by: pett
Priority: normal Milestone:
Component: Platform Version:
Keywords: Cc: Tom Goddard
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description 

The following bug report has been submitted:
Platform:        Windows-10-10.0.19044
ChimeraX Version: 1.4.dev202203220603 (2022-03-22 06:03:07 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Windows fatal exception: code 0x8001010e

Thread 0x000071dc (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 576 in _handle_results
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _boWindows fatal exception: code 0xo8001010et

stWindows fatal exception: rcode 0xa8001010ep


Windows fatal exception: 
code 0xThread 0x8001010e00008fc0

(most recent call first):
Windows fatal exception:   File code 0x"8001010eC

:Windows fatal exception: \code 0xb8001010ei

nWindows fatal exception: \code 0xch8001010ei

meWindows fatal exception: rcode 0xa8001010eX

-dev\Windows fatal exception: bcode 0xi8001010en

\libWindows fatal exception: \code 0xm8001010eu

ltipWindows fatal exception: rcode 0xo8001010ec

essiWindows fatal exception: ncode 0x8001010e

g\pool.py", line 528 in _handle_tasks
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00005a8c (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\connection.py", line 816 in _exhaustive_wait
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\connection.py", line 884 in wait
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 499 in _wait_for_updates
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 519 in _handle_workers
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x000092e4 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00006e94 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\Windows fatal exception: bcode 0xi8001010en

\lib\Windows fatal exception: tcode 0xh8001010er

eadWindows fatal exception: icode 0xn8001010eg

.pyWindows fatal exception: "code 0x, line 8001010e930

in _bWindows fatal exception: ocode 0xo8001010et

strWindows fatal exception: acode 0xp8001010e



Thread 0xWindows fatal exception: 0000825ccode 0x (most recent call first):
8001010e  File 

"CWindows fatal exception: :code 0x\8001010eb

in\Windows fatal exception: ccode 0xh8001010ei

meWindows fatal exception: rcode 0xa8001010eX

-dWindows fatal exception: ecode 0xv8001010e\

bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00003a18 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00006b08 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00004e28 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00000f8c (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00008a24 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00002358 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x000072bc (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x0000696c (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00007fb0 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x000062ec (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\core\commands\cli.py", line 1145 in _browse_parse
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\core\commands\cli.py", line 1233 in parse
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\core\commands\cli.py", line 2488 in _parse_arg
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\core\commands\cli.py", line 2629 in _process_positional_arguments
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\core\commands\cli.py", line 2853 in run
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\core\commands\run.py", line 38 in run
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\ui\gui.py", line 1044 in 
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\ui\gui.py", line 318 in event_loop
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
 File "C:\bin\chimeraX-dev\bin\lib\runpy.py", line 87 in _run_code
 File "C:\bin\chimeraX-dev\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000071dc (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 576 in _handle_results
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00008fc0 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 528 in _handle_tasks
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00005a8c (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\connection.py", line 816 in _exhaustive_wait
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\connection.py", line 884 in wait
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 499 in _wait_for_updates
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 519 in _handle_workers
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x000092e4 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00006e94 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x0000825c (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocesWindows fatal exception: scode 0xi8001010en

g\poWindows fatal exception: ocode 0xl8001010e.

py"Windows fatal exception: , line code 0x1148001010e in 

woWindows fatal exception: rcode 0xk8001010ee

r
Windows fatal exception:   File code 0x"8001010eC

:\Windows fatal exception: bcode 0xi8001010en

\cWindows fatal exception: hcode 0xi8001010em

erWindows fatal exception: acode 0xX8001010e-

deWindows fatal exception: vcode 0x\8001010eb

Windows fatal exception: Windows fatal exception: code 0xi8001010ecode 0x

8001010en

Windows fatal exception: \Windows fatal exception: lcode 0xcode 0xi8001010eb

8001010e\Windows fatal exception: t

code 0xhWindows fatal exception: rcode 0x8001010ee

a8001010edWindows fatal exception: icode 0xn

8001010eg

.Windows fatal exception: Windows fatal exception: pcode 0xcode 0x8001010e8001010e

y

"Windows fatal exception: , line Windows fatal exception: code 0x9108001010e in 

rWindows fatal exception: code 0xucode 0x8001010e8001010en




 File Windows fatal exception: "code 0xCWindows fatal exception: :8001010e\

bcode 0xWindows fatal exception: icode 0x8001010en8001010e



\Windows fatal exception: Windows fatal exception: code 0xcode 0x8001010e8001010e

Windows fatal exception: ccode 0xWindows fatal exception: 8001010ecode 0x



8001010eh

Windows fatal exception: icode 0xWindows fatal exception: mcode 0xWindows fatal exception: 8001010ee8001010e

rcode 0x

8001010ea

Windows fatal exception: Xcode 0xWindows fatal exception: -8001010ecode 0xd8001010ee

v

\Windows fatal exception: bWindows fatal exception: icode 0xncode 0x\8001010el8001010e



iWindows fatal exception: bcode 0xWindows fatal exception: 8001010e\

tcode 0xWindows fatal exception: 8001010ehcode 0xr8001010ee

ad

iWindows fatal exception: nWindows fatal exception: gcode 0x.code 0xp8001010ey

", line 8001010e973

Windows fatal exception:  in code 0xWindows fatal exception: 8001010e_

code 0xbWindows fatal exception: o8001010eocode 0x

t8001010es

trWindows fatal exception: acode 0xp8001010e_

inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00003a18 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00006b08 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00004e28 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bWindows fatal exception: icode 0xn8001010e\

libWindows fatal exception: \code 0xt8001010eh

reWindows fatal exception: acode 0xd8001010ei

ngWindows fatal exception: .code 0xp8001010ey

", line Windows fatal exception: 973code 0x in 8001010e_

boWindows fatal exception: ocode 0xt8001010es

trWindows fatal exception: acode 0xp8001010e_

inWindows fatal exception: ncode 0xe8001010er


 File Windows fatal exception: "code 0xC8001010e:

\bWindows fatal exception: icode 0xn8001010e\

chWindows fatal exception: icode 0xm8001010ee

raX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00000f8c (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00008a24 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\Windows fatal exception: bcode 0xi8001010en

\libWindows fatal exception: \code 0xt8001010ehread

ingWindows fatal exception: .code 0xp8001010ey

", line 910Windows fatal exception:  in code 0xr8001010eu

n
 File "Windows fatal exception: Ccode 0x:8001010e\

biWindows fatal exception: ncode 0x\8001010ec

hiWindows fatal exception: mcode 0xe8001010er

aXWindows fatal exception: -code 0xd8001010ee

v\Windows fatal exception: bcode 0xi8001010en

\lWindows fatal exception: icode 0xb8001010e\

thWindows fatal exception: rcode 0xe8001010ea

ding.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00002358 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x000072bc (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in workerWindows fatal exception: 
code 0x  File 8001010e"

C:\Windows fatal exception: bcode 0xi8001010en

\chWindows fatal exception: icode 0xm8001010ee

raXWindows fatal exception: -code 0xd8001010ee

v\Windows fatal exception: bcode 0xi8001010en

\lWindows fatal exception: icode 0xb8001010e\

thWindows fatal exception: rcode 0xe8001010ea

diWindows fatal exception: ncode 0xg8001010e.

pyWindows fatal exception: "code 0x, line 8001010e910

in rWindows fatal exception: ucode 0xn8001010e


 File "Windows fatal exception: Ccode 0x:8001010e\

bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x0000696c (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00007fb0 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x000062ec (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\core\commands\cli.py", line 1145 in _browse_parse
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\core\commands\cli.py", line 1233 in parse
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\core\commands\cli.py", line 2488 in _parse_arg
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\core\commands\cli.py", line 2629 in _process_positional_arguments
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\core\commands\cli.py", line 2853 in run
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\core\commands\run.py", line 38 in run
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\ui\gui.py", line 1044 in 
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\ui\gui.py", line 318 in event_loop
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
 File "C:\bin\chimeraX-dev\bin\lib\runpy.py", line 87 in _run_code
 File "C:\bin\chimeraX-dev\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000071dc (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 576 in _handle_results
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00008fc0 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 528 in _handle_tasks
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00005a8c (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\connection.py", line 816 in _exhaustive_wait
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\connection.py", line 884 in wait
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 499 in _wait_for_updates
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 519 in _handle_workers
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x000092e4 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00006e94 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x0000825c (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00003a18 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00006b08 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00004e28 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00000f8c (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00008a24 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00002358 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x000072bc (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x0000696c (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00007fb0 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x000062ec (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\core\commands\cli.py", line 1145 in _browse_parse
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\core\commands\cli.py", line 1233 in parse
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\core\commands\cli.py", line 2488 in _parse_arg
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\core\commands\cli.py", line 2629 in _process_positional_arguments
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\core\commands\cli.py", line 2853 in run
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\core\commands\run.py", line 38 in run
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\ui\gui.py", line 1044 in 
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\ui\gui.py", line 318 in event_loop
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
 File "C:\bin\chimeraX-dev\bin\lib\runpy.py", line 87 in _run_code
 File "C:\bin\chimeraX-dev\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000071dc (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 576 in _handle_results
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00008fc0 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 528 in _handle_tasks
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00005a8c (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\connection.py", line 816 in _exhaustive_wait
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\connection.py", line 884 in wait
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 499 in _wait_for_updates
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 519 in _handle_workers
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x000092e4 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00006e94 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x0000825c (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00003a18 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00006b08 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00004e28 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00000f8c (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00008a24 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00002358 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x000072bc (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x0000696c (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00007fb0 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\liWindows fatal exception: bcode 0x\8001010em

ultiWindows fatal exception: pcode 0xr8001010eo

cesWindows fatal exception: scode 0xi8001010en

g\pWindows fatal exception: ocode 0xo8001010el

.pWindows fatal exception: ycode 0x"8001010e, line 

114 in Windows fatal exception: wcode 0xo8001010er

keWindows fatal exception: rcode 0x
8001010e  File 

"CWindows fatal exception: :code 0x\8001010eb

inWindows fatal exception: \code 0xc8001010eh

imWindows fatal exception: ecode 0xr8001010ea

X-Windows fatal exception: dcode 0xe8001010ev

\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x000062ec (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\core\commands\cli.py", line 1145 in _browse_parse
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\core\commands\cli.py", line 1233 in parse
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\core\commands\cli.py", line 2488 in _parse_arg
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\core\commands\cli.py", line 2629 in _process_positional_arguments
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\core\commands\cli.py", line 2853 in run
 File "C:\bin\chimeraX-dev\bWindows fatal exception: icode 0xn8001010e\

lib\Windows fatal exception: scode 0xi8001010et

e-Windows fatal exception: pcode 0xa8001010ec

kaWindows fatal exception: gcode 0xe8001010es

\cWindows fatal exception: hcode 0xi8001010em

erWindows fatal exception: acode 0xx8001010e\

coWindows fatal exception: rcode 0xe8001010e\

coWindows fatal exception: mcode 0xm8001010ea

ndWindows fatal exception: scode 0x\8001010er

unWindows fatal exception: .code 0xp8001010ey

", line Windows fatal exception: 38code 0x in 8001010er

un
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\ui\gui.py", line 1044 in 
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\ui\gui.py", line 318 in event_loop
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
 File "C:\bin\chimeraX-dev\bin\lib\runpy.py", line 87 in _run_code
 File "C:\bin\chimeraX-dev\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000071dc (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 576 in _handle_results
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00008fc0 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 528 in _handle_tasks
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threWindows fatal exception: acode 0xd8001010ei

ng.pWindows fatal exception: ycode 0x"8001010e, line 973 in _bootst

rap_iWindows fatal exception: ncode 0xn8001010ee

r
 File Windows fatal exception: "code 0xC8001010e:

\bWindows fatal exception: icode 0xn8001010e\

chWindows fatal exception: icode 0xm8001010ee

raWindows fatal exception: Xcode 0x-8001010ed

evWindows fatal exception: \code 0xb8001010ei

n\Windows fatal exception: lcode 0xi8001010eb

\tWindows fatal exception: hcode 0xr8001010ee

adiWindows fatal exception: ncode 0xg8001010e.

py", line 930 in _bootstrap

Thread 0x00005a8c (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\connection.py", line 816 in _exhaustive_wait
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\connection.py", line 884 in wait
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 499 in _wait_for_updates
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 519 in _handle_workers
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\biWindows fatal exception: ncode 0x\8001010el

ib\tWindows fatal exception: hcode 0xr8001010ee

adWindows fatal exception: icode 0xn8001010eg

.pWindows fatal exception: ycode 0x"8001010e, line 

930 in Windows fatal exception: _code 0xb8001010eo

otWindows fatal exception: scode 0xt8001010er

apWindows fatal exception: 
code 0x
8001010eThread 0x

000092e4 (most recent call first):
Windows fatal exception:   File code 0x"8001010eC

:\Windows fatal exception: bcode 0xi8001010en

\cWindows fatal exception: hcode 0xi8001010em

erWindows fatal exception: acode 0xX8001010e-

dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00006e94 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x0000825c (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in Windows fatal exception: _code 0xb8001010eo

otstWindows fatal exception: rcode 0xa8001010ep

_inWindows fatal exception: ncode 0xe8001010er


 File Windows fatal exception: "code 0xC8001010e:

\bWindows fatal exception: icode 0xn8001010e\

chWindows fatal exception: icode 0xm8001010ee

raWindows fatal exception: Xcode 0x-8001010ed

ev\Windows fatal exception: bcode 0xi8001010en

\lWindows fatal exception: icode 0xb8001010e\

thWindows fatal exception: rcode 0xe8001010ea

diWindows fatal exception: ncode 0xg8001010e.

py", line 930 in _bootstrap

Thread 0x00003a18 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00006b08 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00004e28 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00000f8c (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00008a24 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in workerWindows fatal exception: 
code 0x  File 8001010e"

C:\bWindows fatal exception: icode 0xn8001010e\

chWindows fatal exception: icode 0xm8001010ee

raWindows fatal exception: Xcode 0x-8001010ed

evWindows fatal exception: \code 0xb8001010ei

n\Windows fatal exception: lcode 0xi8001010eb

\tWindows fatal exception: hcode 0xre8001010ea

diWindows fatal exception: ncode 0xg8001010e.

pyWindows fatal exception: "code 0x, line 8001010e910

in rWindows fatal exception: ucode 0xn8001010e


 File "Windows fatal exception: Ccode 0x:8001010e\

bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00002358 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x000072bc (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\Windows fatal exception: ccode 0xh8001010ei

meraWindows fatal exception: Xcode 0x-8001010ed

ev\Windows fatal exception: bcode 0xi8001010en

\liWindows fatal exception: bcode 0x\8001010et

hrWindows fatal exception: ecode 0xa8001010ed

inWindows fatal exception: gcode 0x.8001010ep

y"Windows fatal exception: , line code 0x9738001010e in 

_bWindows fatal exception: ocode 0xo8001010et

stWindows fatal exception: rcode 0xa8001010ep

_iWindows fatal exception: ncode 0xn8001010ee

r
Windows fatal exception:   File code 0x"8001010eC

:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x0000696c (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-devWindows fatal exception: \code 0xb8001010ei

n\liWindows fatal exception: bcode 0x\8001010et

hrWindows fatal exception: ecode 0xa8001010ed

inWindows fatal exception: gcode 0x.8001010ep

y"Windows fatal exception: , line code 0x9308001010e in 

_bWindows fatal exception: ocode 0xo8001010et

stWindows fatal exception: rcode 0xa8001010ep



Windows fatal exception: Thread 0xcode 0x00007fb08001010e (most recent call first):


 File "Windows fatal exception: Ccode 0x:8001010e\

biWindows fatal exception: ncode 0x\8001010ec

hiWindows fatal exception: mcode 0xe8001010er

aX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.pyWindows fatal exception: "code 0x, line 8001010e910

in ruWindows fatal exception: ncode 0x
8001010e  File 

"CWindows fatal exception: code 0x:8001010e\

biWindows fatal exception: ncode 0x\8001010ec

hiWindows fatal exception: mcode 0xe8001010er

aXWindows fatal exception: -code 0xd8001010ee

v\Windows fatal exception: bcode 0xi8001010en

\lWindows fatal exception: icode 0xb8001010e\

thWindows fatal exception: rcode 0xe8001010ea

diWindows fatal exception: ncode 0xg8001010e.

pyWindows fatal exception: "code 0x, line 8001010e973

in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x000062ec (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\core\commands\cli.py", line 1145 in _browse_parse
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\core\commands\cli.py", line 1233 in parse
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\core\commands\cli.py", line 2488 in _parse_arg
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\core\commands\cli.py", line Windows fatal exception: 2629code 0x in 8001010e_

procWindows fatal exception: ecode 0xs8001010es

_poWindows fatal exception: scode 0xi8001010et

ionWindows fatal exception: acode 0xl8001010e_

arWindows fatal exception: gcode 0xu8001010em

enWindows fatal exception: tcode 0xs8001010e


 File "Windows fatal exception: Ccode 0x:8001010e\

biWindows fatal exception: ncode 0x\8001010ec

hiWindows fatal exception: mcode 0xe8001010er

aXWindows fatal exception: -code 0xd8001010ee

v\Windows fatal exception: bcode 0xi8001010en

\lib\site-packages\chimerax\core\commands\cli.py", line 2853 in run
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\core\commands\run.py", line 38 in run
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\ui\gui.py", line 1044 in 
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\Windows fatal exception: ucode 0xi8001010e\

gui.Windows fatal exception: pcode 0xy8001010e"

, line 318 in Windows fatal exception: ecode 0xv8001010ee

ntWindows fatal exception: _code 0xl8001010eo

opWindows fatal exception: 
code 0x  File 8001010e"

C:Windows fatal exception: \code 0xb8001010ei

n\Windows fatal exception: ccode 0xh8001010ei

meWindows fatal exception: rcode 0xa8001010eX

-dWindows fatal exception: ecode 0xv8001010e\

biWindows fatal exception: ncode 0x\8001010el

ibWindows fatal exception: \code 0xs8001010ei

te-packages\ChimeraX_main.py", line 867 in init
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
 File "C:\bin\chimeraX-dev\bin\lib\runpy.py", line 87 in _run_code
 File "C:\bin\chimeraX-dev\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000071dc (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 576 in _handle_results
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00008fc0 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 528 in _handle_tasks
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00005a8c (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\connection.py", line 816 in _exhaustive_wait
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\connection.py", line 884 in wait
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 499 in _wait_for_updates
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 519 in _handle_workers
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x000092e4 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00006e94 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x0000825c (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00003a18 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00006b08 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00004e28 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00000f8c (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00008a24 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00002358 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x000072bc (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x0000696c (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00007fb0 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x000062ec (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\core\commands\cli.py", line 1145 in _browse_parse
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\core\commands\cli.py", line 1233 in parse
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\core\commands\cli.py", line 2488 in _parse_arg
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\core\commands\cli.py", line 2629 in _process_positional_arguments
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\core\commands\cli.py", line 2853 in run
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\core\commands\run.py", line 38 in run
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\ui\gui.py", line 1044 in 
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\chimerax\ui\gui.py", line 318 in event_loop
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
 File "C:\bin\chimeraX-dev\bin\lib\runpy.py", line 87 in _run_code
 File "C:\bin\chimeraX-dev\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000071dc (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 576 in _handle_results
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00008fc0 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 528 in _handle_tasks
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00005a8c (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\connection.py", line 816 in _exhaustive_wait
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\connection.py", line 884 in wait
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 499 in _wait_for_updates
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 519 in _handle_workers
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x000092e4 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00006e94 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x0000825c (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00003a18 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00006b08 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00004e28 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00000f8c (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00008a24 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00002358 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x000072bc (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x0000696c (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00007fb0 (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\multiprocessing\pool.py", line 114 in worker
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 910 in run
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 973 in _bootstrap_inner
 File "C:\bin\chimeraX-dev\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x000062ec (most recent call first):
 File "C:\bin\chimeraX-dev\bin\lib\site-packages\numpy\core\_methods.py", line 48 in _sum
Windows fatal exception: access violation

===== Log before crash start =====
You can double click a model's Name or ID in the model panel to edit those
fields  
UCSF ChimeraX version: 1.4.dev202203220603 (2022-03-22)  
© 2016-2022 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> ui tool show Registration

"Other funding source" field cannot be empty when "other" is selected  
Thank you for registering your copy of ChimeraX. By providing the information
requested you will be helping us document the impact this software is having
in the scientific community. The information you supplied will only be used
for reporting summary usage statistics; no individual data will be released.  

> open
> D:\owncloud\Projekti_KI\SIDE\2022-07-14__HA13_structure\220713_HA13_filament_run13build_Seq_Fixed.pdb
> format pdb

Chain information for 220713_HA13_filament_run13build_Seq_Fixed.pdb #1  
---  
Chain | Description  
0 1 2 3 4 5 6 7 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z a b c d e
f g h i j k l m n o p q r s t u v w x y z | No description available  


> show cartoons

> hide cartoons

> hide atoms

> show atoms

> show surfaces

> color bychain

> color bypolymer

> color #1 #3a63af transparency 0

> color #1 black transparency 0

> color #1 #5555ff transparency 0

> color #1 #aaaaff transparency 0

> volume planes z style image imageMode "full region"

No volumes specified  

> ui mousemode right "move planes"

> ui mousemode right clip

> ui mousemode right "clip rotate"

> lighting soft

> lighting flat

> lighting shadows true intensity 0.5

> lighting full

> lighting soft

> graphics silhouettes false

> lighting soft

> graphics silhouettes true

> save C:/ProgramData/ChimeraX/HA13_sym.png width 1806 height 1195 supersample
> 3

> movie record

> turn y 2 180

> wait 180

> movie encode C:\Users\ajasjal\Desktop\movie4.mp4

Movie saved to \C:Users\\...\Desktop\movie4.mp4  


> save C:/ProgramData/ChimeraX/HA13_sym.mpg.png width 1806 height 1195
> supersample 3

> movie encode
> D:\owncloud\Projekti_KI\clanki\2022-10-01__FrekvencaX_AF\struct\HA13_sym_surf_roll.mpg

Unrecognized movie file suffix HA13_sym_surf_roll.mpg, use *.avi, *.mp4,
*.ogv, *.mov, *.png, *.wmv, *.webm  

> movie encode
> D:\owncloud\Projekti_KI\clanki\2022-10-01__FrekvencaX_AF\struct\HA13_sym_surf_roll.mp4

No frames have been recorded  

> movie record

> turn y 2 180

> wait 180

> movie encode C:\Users\ajasjal\Desktop\movie5.mp4

Movie saved to \C:Users\\...\Desktop\movie5.mp4  



===== Log before crash end =====

Log:
UCSF ChimeraX version: 1.4.dev202203220603 (2022-03-22)  
© 2016-2022 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open
> D:/owncloud/Projekti_KI/clanki/2022-10-01__FrekvencaX_AF/struct/HB67_AF13_symm.pdb

Summary of feedback from opening
D:/owncloud/Projekti_KI/clanki/2022-10-01__FrekvencaX_AF/struct/HB67_AF13_symm.pdb  
---  
warnings | Duplicate atom serial number found: 1  
Duplicate atom serial number found: 2  
Duplicate atom serial number found: 3  
Duplicate atom serial number found: 4  
Duplicate atom serial number found: 5  
245710 messages similar to the above omitted  
Ignored bad PDB record found on line 251344  
ATOM 1 C ORI Y -1 -73.624 -102.219 -50.854 1.00 0.00  

Ignored bad PDB record found on line 251345  
ATOM 2 O X Y -1 -73.671 -101.508 -50.153 1.00 0.00  

Ignored bad PDB record found on line 251346  
ATOM 3 C Y Y -1 -74.613 -102.154 -50.987 1.00 0.00  

Ignored bad PDB record found on line 251347  
ATOM 1 C ORI Y -1 -111.253 -94.065 -50.220 1.00 0.00  

Ignored bad PDB record found on line 251348  
ATOM 2 O X Y -1 -110.894 -93.442 -49.525 1.00 0.00  

19 messages similar to the above omitted  
Duplicate atom serial number found: 1  
Duplicate atom serial number found: 2  
Duplicate atom serial number found: 3  
Duplicate atom serial number found: 1  
Duplicate atom serial number found: 2  
61 messages similar to the above omitted  
Ignored bad PDB record found on line 251434  
ATOM 1 C ORI Y 0 -121.951 -56.629 -75.479 1.00 0.00  

Ignored bad PDB record found on line 251435  
ATOM 2 O X Y 0 -121.412 -56.090 -74.832 1.00 0.00  

Ignored bad PDB record found on line 251436  
ATOM 3 C Y Y 0 -122.781 -56.161 -75.177 1.00 0.00  

Ignored bad PDB record found on line 251437  
ATOM 1 C ORI Y 0 -148.920 -34.687 -58.924 1.00 0.00  

Ignored bad PDB record found on line 251438  
ATOM 2 O X Y 0 -148.089 -34.384 -58.456 1.00 0.00  

13 messages similar to the above omitted  
Duplicate atom serial number found: 1  
Duplicate atom serial number found: 2  
Duplicate atom serial number found: 3  
Duplicate atom serial number found: 1  
Duplicate atom serial number found: 2  
58 messages similar to the above omitted  
Ignored bad PDB record found on line 251515  
ATOM 1 C ORI Y 1 -60.790 -42.905 -110.090 1.00 0.00  

Ignored bad PDB record found on line 251516  
ATOM 2 O X Y 1 -60.847 -42.193 -109.390 1.00 0.00  

Ignored bad PDB record found on line 251517  
ATOM 3 C Y Y 1 -61.779 -42.847 -110.230 1.00 0.00  

Ignored bad PDB record found on line 251518  
ATOM 1 C ORI Y 1 -98.482 -35.028 -109.747 1.00 0.00  

Ignored bad PDB record found on line 251519  
ATOM 2 O X Y 1 -98.133 -34.402 -109.050 1.00 0.00  

16 messages similar to the above omitted  
Duplicate atom serial number found: 1  
Duplicate atom serial number found: 2  
Duplicate atom serial number found: 3  
Duplicate atom serial number found: 1  
Duplicate atom serial number found: 2  
10 messages similar to the above omitted  

Chain information for HB67_AF13_symm.pdb #1  
---  
Chain | Description  
A B C D E F G H I J K L M N O P Q R S T U V W X Y Z a b c d e f g h i j k l m
n o p q r s | No description available  





OpenGL version: 3.3.0 NVIDIA 512.78
OpenGL renderer: NVIDIA GeForce GTX 1070 with Max-Q Design/PCIe/SSE2
OpenGL vendor: NVIDIA Corporation

Locale: sl_SI.cp1252
Qt version: PyQt6 6.2.3, Qt 6.2.3
Qt platform: windows

Manufacturer: HP
Model: OMEN by HP Laptop 15-dc0xxx
OS: Microsoft Windows 10 Pro (Build 19044)
Memory: 34,230,063,104
MaxProcessMemory: 137,438,953,344
CPU: 12 Intel(R) Core(TM) i7-8750H CPU @ 2.20GHz
OSLanguage: en-US

Installed Packages:
   alabaster: 0.7.12
   appdirs: 1.4.4
   Babel: 2.9.1
   backcall: 0.2.0
   blockdiag: 3.0.0
   certifi: 2021.10.8
   cftime: 1.6.0
   charset-normalizer: 2.0.12
   ChimeraX-AddCharge: 1.2.3
   ChimeraX-AddH: 2.1.11
   ChimeraX-AlignmentAlgorithms: 2.0
   ChimeraX-AlignmentHdrs: 3.2.1
   ChimeraX-AlignmentMatrices: 2.0
   ChimeraX-Alignments: 2.3
   ChimeraX-AlphaFold: 1.0
   ChimeraX-AltlocExplorer: 1.0.1
   ChimeraX-AmberInfo: 1.0
   ChimeraX-Arrays: 1.0
   ChimeraX-Atomic: 1.36.3
   ChimeraX-AtomicLibrary: 6.1.1
   ChimeraX-AtomSearch: 2.0.1
   ChimeraX-AxesPlanes: 2.1
   ChimeraX-BasicActions: 1.1
   ChimeraX-BILD: 1.0
   ChimeraX-BlastProtein: 2.0
   ChimeraX-BondRot: 2.0
   ChimeraX-BugReporter: 1.0
   ChimeraX-BuildStructure: 2.6.1
   ChimeraX-Bumps: 1.0
   ChimeraX-BundleBuilder: 1.1
   ChimeraX-ButtonPanel: 1.0
   ChimeraX-CageBuilder: 1.0
   ChimeraX-CellPack: 1.0
   ChimeraX-Centroids: 1.2
   ChimeraX-ChemGroup: 2.0
   ChimeraX-Clashes: 2.2.2
   ChimeraX-ColorActions: 1.0
   ChimeraX-ColorGlobe: 1.0
   ChimeraX-ColorKey: 1.5.1
   ChimeraX-CommandLine: 1.2.2
   ChimeraX-ConnectStructure: 2.0.1
   ChimeraX-Contacts: 1.0
   ChimeraX-Core: 1.4.dev202203220603
   ChimeraX-CoreFormats: 1.1
   ChimeraX-coulombic: 1.3.2
   ChimeraX-Crosslinks: 1.0
   ChimeraX-Crystal: 1.0
   ChimeraX-CrystalContacts: 1.0
   ChimeraX-DataFormats: 1.2.2
   ChimeraX-Dicom: 1.0
   ChimeraX-DistMonitor: 1.1.5
   ChimeraX-Dssp: 2.0
   ChimeraX-EMDB-SFF: 1.0
   ChimeraX-ExperimentalCommands: 1.0
   ChimeraX-FileHistory: 1.0
   ChimeraX-FunctionKey: 1.0
   ChimeraX-Geometry: 1.1
   ChimeraX-gltf: 1.0
   ChimeraX-Graphics: 1.1
   ChimeraX-Hbonds: 2.1.2
   ChimeraX-Help: 1.2
   ChimeraX-HKCage: 1.3
   ChimeraX-IHM: 1.1
   ChimeraX-ImageFormats: 1.2
   ChimeraX-IMOD: 1.0
   ChimeraX-IO: 1.0.1
   ChimeraX-ItemsInspection: 1.0
   ChimeraX-Label: 1.1
   ChimeraX-ListInfo: 1.1.1
   ChimeraX-Log: 1.1.5
   ChimeraX-LookingGlass: 1.1
   ChimeraX-Maestro: 1.8.1
   ChimeraX-Map: 1.1
   ChimeraX-MapData: 2.0
   ChimeraX-MapEraser: 1.0
   ChimeraX-MapFilter: 2.0
   ChimeraX-MapFit: 2.0
   ChimeraX-MapSeries: 2.1
   ChimeraX-Markers: 1.0
   ChimeraX-Mask: 1.0
   ChimeraX-MatchMaker: 2.0.6
   ChimeraX-MDcrds: 2.6
   ChimeraX-MedicalToolbar: 1.0.1
   ChimeraX-Meeting: 1.0
   ChimeraX-MLP: 1.1
   ChimeraX-mmCIF: 2.7
   ChimeraX-MMTF: 2.1
   ChimeraX-Modeller: 1.5.5
   ChimeraX-ModelPanel: 1.3.2
   ChimeraX-ModelSeries: 1.0
   ChimeraX-Mol2: 2.0
   ChimeraX-Morph: 1.0
   ChimeraX-MouseModes: 1.1
   ChimeraX-Movie: 1.0
   ChimeraX-Neuron: 1.0
   ChimeraX-Nucleotides: 2.0.2
   ChimeraX-OpenCommand: 1.8
   ChimeraX-PDB: 2.6.6
   ChimeraX-PDBBio: 1.0
   ChimeraX-PDBLibrary: 1.0.2
   ChimeraX-PDBMatrices: 1.0
   ChimeraX-PickBlobs: 1.0
   ChimeraX-Positions: 1.0
   ChimeraX-PresetMgr: 1.1
   ChimeraX-PubChem: 2.1
   ChimeraX-ReadPbonds: 1.0.1
   ChimeraX-Registration: 1.1
   ChimeraX-RemoteControl: 1.0
   ChimeraX-ResidueFit: 1.0
   ChimeraX-RestServer: 1.1
   ChimeraX-RNALayout: 1.0
   ChimeraX-RotamerLibMgr: 2.0.1
   ChimeraX-RotamerLibsDunbrack: 2.0
   ChimeraX-RotamerLibsDynameomics: 2.0
   ChimeraX-RotamerLibsRichardson: 2.0
   ChimeraX-SaveCommand: 1.5
   ChimeraX-SchemeMgr: 1.0
   ChimeraX-SDF: 2.0
   ChimeraX-Segger: 1.0
   ChimeraX-Segment: 1.0
   ChimeraX-SelInspector: 1.0
   ChimeraX-SeqView: 2.5
   ChimeraX-Shape: 1.0.1
   ChimeraX-Shell: 1.0
   ChimeraX-Shortcuts: 1.1
   ChimeraX-ShowAttr: 1.0
   ChimeraX-ShowSequences: 1.0
   ChimeraX-SideView: 1.0
   ChimeraX-Smiles: 2.1
   ChimeraX-SmoothLines: 1.0
   ChimeraX-SpaceNavigator: 1.0
   ChimeraX-StdCommands: 1.8
   ChimeraX-STL: 1.0
   ChimeraX-Storm: 1.0
   ChimeraX-StructMeasure: 1.0.1
   ChimeraX-Struts: 1.0.1
   ChimeraX-Surface: 1.0
   ChimeraX-SwapAA: 2.0
   ChimeraX-SwapRes: 2.1.1
   ChimeraX-TapeMeasure: 1.0
   ChimeraX-Test: 1.0
   ChimeraX-Toolbar: 1.1
   ChimeraX-ToolshedUtils: 1.2.1
   ChimeraX-Tug: 1.0
   ChimeraX-UI: 1.16.3
   ChimeraX-uniprot: 2.2
   ChimeraX-UnitCell: 1.0
   ChimeraX-ViewDockX: 1.1.2
   ChimeraX-VIPERdb: 1.0
   ChimeraX-Vive: 1.1
   ChimeraX-VolumeMenu: 1.0
   ChimeraX-VTK: 1.0
   ChimeraX-WavefrontOBJ: 1.0
   ChimeraX-WebCam: 1.0
   ChimeraX-WebServices: 1.0
   ChimeraX-Zone: 1.0
   colorama: 0.4.4
   comtypes: 1.1.10
   cxservices: 1.1
   cycler: 0.11.0
   Cython: 0.29.26
   debugpy: 1.5.1
   decorator: 5.1.1
   docutils: 0.17.1
   entrypoints: 0.4
   filelock: 3.4.2
   fonttools: 4.31.1
   funcparserlib: 1.0.0a0
   grako: 3.16.5
   h5py: 3.6.0
   html2text: 2020.1.16
   idna: 3.3
   ihm: 0.27
   imagecodecs: 2021.11.20
   imagesize: 1.3.0
   ipykernel: 6.6.1
   ipython: 7.31.1
   ipython-genutils: 0.2.0
   jedi: 0.18.1
   Jinja2: 3.0.3
   jupyter-client: 7.1.0
   jupyter-core: 4.9.2
   kiwisolver: 1.4.0
   line-profiler: 3.4.0
   lxml: 4.7.1
   lz4: 3.1.10
   MarkupSafe: 2.1.1
   matplotlib: 3.5.1
   matplotlib-inline: 0.1.3
   msgpack: 1.0.3
   nest-asyncio: 1.5.4
   netCDF4: 1.5.8
   networkx: 2.6.3
   numexpr: 2.8.1
   numpy: 1.22.1
   openvr: 1.16.802
   packaging: 21.3
   ParmEd: 3.4.3
   parso: 0.8.3
   pickleshare: 0.7.5
   Pillow: 9.0.1
   pip: 21.3.1
   pkginfo: 1.8.2
   prompt-toolkit: 3.0.28
   psutil: 5.9.0
   pycollada: 0.7.2
   pydicom: 2.2.2
   Pygments: 2.11.2
   PyOpenGL: 3.1.5
   PyOpenGL-accelerate: 3.1.5
   pyparsing: 3.0.7
   PyQt6-commercial: 6.2.3
   PyQt6-sip: 13.2.0
   PyQt6-WebEngine-commercial: 6.2.1
   python-dateutil: 2.8.2
   pytz: 2022.1
   pywin32: 303
   pyzmq: 22.3.0
   qtconsole: 5.2.2
   QtPy: 2.0.1
   RandomWords: 0.3.0
   requests: 2.27.1
   scipy: 1.7.3
   setuptools: 59.8.0
   sfftk-rw: 0.7.1
   six: 1.16.0
   snowballstemmer: 2.2.0
   sortedcontainers: 2.4.0
   Sphinx: 4.3.2
   sphinx-autodoc-typehints: 1.15.2
   sphinxcontrib-applehelp: 1.0.2
   sphinxcontrib-blockdiag: 3.0.0
   sphinxcontrib-devhelp: 1.0.2
   sphinxcontrib-htmlhelp: 2.0.0
   sphinxcontrib-jsmath: 1.0.1
   sphinxcontrib-qthelp: 1.0.3
   sphinxcontrib-serializinghtml: 1.1.5
   suds-community: 1.0.0
   tables: 3.7.0
   tifffile: 2021.11.2
   tinyarray: 1.2.4
   tornado: 6.1
   traitlets: 5.1.1
   urllib3: 1.26.9
   wcwidth: 0.2.5
   webcolors: 1.11.1
   wheel: 0.37.1
   wheel-filename: 1.3.0
   WMI: 1.5.1

Change History (2)

comment:1 by pett, 3 years ago

Cc: Tom Goddard added
Component: Unassigned → Platform
Owner: set to pett
Platform: → all
Project: → ChimeraX
Status: new → accepted
Summary: ChimeraX bug report submission → Crash using File→Open on Windows and/or in return statement

comment:2 by pett, 3 years ago

Resolution: → can't reproduce
Status: accepted → closed

1.4, before Python upgrade

Note: See TracTickets for help on using tickets.