Opened 8 years ago

Closed 8 years ago

#781 closed defect (fixed)

hbonds error on 1bzm

Reported by: Elaine Meng Owned by: pett
Priority: major Milestone:
Component: Structure Analysis Version:
Keywords: Cc:
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description

open1 bzm
hb

Traceback (most recent call last):
File "/Users/chimera/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/chimerax/cmd_line/tool.py", line 177, in execute
cmd.run(cmd_text)
File "/Users/chimera/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/chimerax/core/commands/cli.py", line 2395, in run
result = ci.function(session, kw_args)
File "/Users/chimera/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/chimerax/hbonds/cmd.py", line 66, in cmd_hbonds
inter_submodel=inter_submodel, cache_da=cache_DA)
File "/Users/chimera/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/chimerax/hbonds/hbond.py", line 595, in find_hbonds
*tuple(arg_list + add_args)):
File "/Users/chimera/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/chimerax/hbonds/donor_geom.py", line 172, in don_upsilon_tau
sp3_N_upsilon_low, sp3NupsilonHigh, sp3_N_theta, sp3_N_tau, tau_sym)
NameError: name 'sp3NupsilonHigh' is not defined

NameError: name 'sp3NupsilonHigh' is not defined

File "/Users/chimera/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/chimerax/hbonds/donor_geom.py", line 172, in don_upsilon_tau
sp3_N_upsilon_low, sp3NupsilonHigh, sp3_N_theta, sp3_N_tau, tau_sym

Change History (1)

comment:1 by pett, 8 years ago

Resolution: → fixed
Status: assigned → closed
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