Opened 3 years ago

Closed 3 years ago

#7772 closed defect (fixed)

"close session" with multiple models rotating: Cannot multiply Place times "None"

Reported by: rkrishnan@… Owned by: Tom Goddard
Priority: normal Milestone:
Component: Sessions Version:
Keywords: Cc:
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description 

The following bug report has been submitted:
Platform:        Windows-10-10.0.22000
ChimeraX Version: 1.4 (2022-06-03 23:39:42 UTC)
Description
saving a sesion file with tile and ongoing rotations.

Log:
You can double click a model's Name or ID in the model panel to edit those
fields  
UCSF ChimeraX version: 1.4 (2022-06-03)  
© 2016-2022 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open
> L:\Graphics\BCRX001\GraphicsBackup\C5a-complement\sai2022\C5-Xtals_superposed.mae
> format "schrodinger maestro"

Chain information for C5-Xtals_superposed.mae  
---  
Chain | Description  
1.1/A | No description available  
1.2/A | No description available  
1.3/A | No description available  
1.6/A | No description available  
1.7/A | No description available  
1.8/A | No description available  
1.9/A | No description available  
1.10/A | No description available  
1.11/A | No description available  
1.4/B | No description available  
1.6/B 1.7/B | No description available  
1.8/B | No description available  
1.9/B | No description available  
1.10/B | No description available  
1.5/C | No description available  
1.6/C | No description available  
1.7/C | No description available  
1.8/C | No description available  
1.9/C | No description available  
1.10/C | No description available  
1.5/D | No description available  
1.6/D | No description available  
1.2/X | No description available  
1.3/X | No description available  
1.2/Y | No description available  
1.4/Y | No description available  
  
Opened C5-Xtals_superposed.mae containing 11 structures (163394 atoms, 166607
bonds)  

> split #1

Did not split C5-Xtals_superposed.mae, has only one piece  
Split C5-Xtals_superposed.mae (#1.2) into 3 models  
Split C5-Xtals_superposed.mae (#1.3) into 2 models  
Split C5-Xtals_superposed.mae (#1.4) into 2 models  
Split C5-Xtals_superposed.mae (#1.5) into 2 models  
Split C5-Xtals_superposed.mae (#1.6) into 4 models  
Split C5-Xtals_superposed.mae (#1.7) into 3 models  
Split C5-Xtals_superposed.mae (#1.8) into 3 models  
Split C5-Xtals_superposed.mae (#1.9) into 3 models  
Split C5-Xtals_superposed.mae (#1.10) into 3 models  
Did not split C5-Xtals_superposed.mae, has only one piece  
Chain information for C5-Xtals_superposed.mae A #1.2.1  
---  
Chain | Description  
A | No description available  
  
Chain information for C5-Xtals_superposed.mae X #1.2.2  
---  
Chain | Description  
X | No description available  
  
Chain information for C5-Xtals_superposed.mae Y #1.2.3  
---  
Chain | Description  
Y | No description available  
  
Chain information for C5-Xtals_superposed.mae A #1.3.1  
---  
Chain | Description  
A | No description available  
  
Chain information for C5-Xtals_superposed.mae X #1.3.2  
---  
Chain | Description  
X | No description available  
  
Chain information for C5-Xtals_superposed.mae B #1.4.1  
---  
Chain | Description  
B | No description available  
  
Chain information for C5-Xtals_superposed.mae Y #1.4.2  
---  
Chain | Description  
Y | No description available  
  
Chain information for C5-Xtals_superposed.mae C #1.5.1  
---  
Chain | Description  
C | No description available  
  
Chain information for C5-Xtals_superposed.mae D #1.5.2  
---  
Chain | Description  
D | No description available  
  
Chain information for C5-Xtals_superposed.mae A #1.6.1  
---  
Chain | Description  
A | No description available  
  
Chain information for C5-Xtals_superposed.mae B #1.6.2  
---  
Chain | Description  
B | No description available  
  
Chain information for C5-Xtals_superposed.mae C #1.6.3  
---  
Chain | Description  
C | No description available  
  
Chain information for C5-Xtals_superposed.mae D #1.6.4  
---  
Chain | Description  
D | No description available  
  
Chain information for C5-Xtals_superposed.mae A #1.7.1  
---  
Chain | Description  
A | No description available  
  
Chain information for C5-Xtals_superposed.mae B #1.7.2  
---  
Chain | Description  
B | No description available  
  
Chain information for C5-Xtals_superposed.mae C #1.7.3  
---  
Chain | Description  
C | No description available  
  
Chain information for C5-Xtals_superposed.mae A #1.8.1  
---  
Chain | Description  
A | No description available  
  
Chain information for C5-Xtals_superposed.mae B #1.8.2  
---  
Chain | Description  
B | No description available  
  
Chain information for C5-Xtals_superposed.mae C #1.8.3  
---  
Chain | Description  
C | No description available  
  
Chain information for C5-Xtals_superposed.mae A #1.9.1  
---  
Chain | Description  
A | No description available  
  
Chain information for C5-Xtals_superposed.mae B #1.9.2  
---  
Chain | Description  
B | No description available  
  
Chain information for C5-Xtals_superposed.mae C #1.9.3  
---  
Chain | Description  
C | No description available  
  
Chain information for C5-Xtals_superposed.mae A #1.10.1  
---  
Chain | Description  
A | No description available  
  
Chain information for C5-Xtals_superposed.mae B #1.10.2  
---  
Chain | Description  
B | No description available  
  
Chain information for C5-Xtals_superposed.mae C #1.10.3  
---  
Chain | Description  
C | No description available  
  

> color bychain

> tile

11 models tiled  

> help help:user

> turn y 1 #1.1 center #1.1;

Expected 'forever' or an integer >= 1 or a keyword  

> roll y 1 #1.1 center #1.1;

Expected 'forever' or an integer >= 1 or a keyword  

> roll y 1 #1.1 center #1.1;

Expected 'forever' or an integer >= 1 or a keyword  

> roll y 1 models #1.1 center #1.1

> roll y 1 models #1.2 center #1.2

> roll y 2 models #1.3 center #1.3

> roll y 2 models #1.4 center #1.4

> roll y 4 models #1.45center #1.5;

Invalid "models" argument: only initial part "#1" of atom specifier valid  

> roll y 4 models #1.5 center #1.5

> roll y 3 models #1.2 center #1.2

> roll z 3 models #1.11 center #1.11

> roll z 3 models #1.10 center #1.10

> roll x 3 models #1.9 center #1.9

> roll x 3 models #1.7 center #1.7

> wobble y 3 models #1.6 center #1.6

> wobble y 8 models #1.6 center #1.6

> wobble y 10 models #1.6 center #1.6

> wobble y 40 models #1.6 center #1.6

> wobble z 40 models #1.9 center #1.9

> wobble z 40 models #1.8 center #1.8

QMainWindowLayout::tabPosition called with out-of-bounds value '0'  

> save C:/Users/RKrishnan/Desktop/c5-complexes.cxs

> close session

Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\core\triggerset.py", line 134, in invoke  
return self._func(self._name, data)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\core\commands\motion.py", line 38, in __call__  
self.func(self.session, f)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\std_commands\turn.py", line 132, in turn_step  
self._move(r, invert=undo)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\std_commands\turn.py", line 120, in _move  
m.positions = r * m.positions  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\geometry\place.py", line 125, in __mul__  
raise TypeError('Cannot multiply Place times "%s"' % str(p))  
TypeError: Cannot multiply Place times "None"  
  
Error processing trigger "new frame":  
TypeError: Cannot multiply Place times "None"  
  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\geometry\place.py", line 125, in __mul__  
raise TypeError('Cannot multiply Place times "%s"' % str(p))  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\core\triggerset.py", line 134, in invoke  
return self._func(self._name, data)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\core\commands\motion.py", line 38, in __call__  
self.func(self.session, f)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\std_commands\turn.py", line 132, in turn_step  
self._move(r, invert=undo)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\std_commands\turn.py", line 120, in _move  
m.positions = r * m.positions  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\geometry\place.py", line 125, in __mul__  
raise TypeError('Cannot multiply Place times "%s"' % str(p))  
TypeError: Cannot multiply Place times "None"  
  
Error processing trigger "new frame":  
TypeError: Cannot multiply Place times "None"  
  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\geometry\place.py", line 125, in __mul__  
raise TypeError('Cannot multiply Place times "%s"' % str(p))  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\core\triggerset.py", line 134, in invoke  
return self._func(self._name, data)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\core\commands\motion.py", line 38, in __call__  
self.func(self.session, f)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\std_commands\turn.py", line 132, in turn_step  
self._move(r, invert=undo)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\std_commands\turn.py", line 120, in _move  
m.positions = r * m.positions  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\geometry\place.py", line 125, in __mul__  
raise TypeError('Cannot multiply Place times "%s"' % str(p))  
TypeError: Cannot multiply Place times "None"  
  
Error processing trigger "new frame":  
TypeError: Cannot multiply Place times "None"  
  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\geometry\place.py", line 125, in __mul__  
raise TypeError('Cannot multiply Place times "%s"' % str(p))  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\core\triggerset.py", line 134, in invoke  
return self._func(self._name, data)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\core\commands\motion.py", line 38, in __call__  
self.func(self.session, f)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\std_commands\turn.py", line 132, in turn_step  
self._move(r, invert=undo)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\std_commands\turn.py", line 120, in _move  
m.positions = r * m.positions  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\geometry\place.py", line 125, in __mul__  
raise TypeError('Cannot multiply Place times "%s"' % str(p))  
TypeError: Cannot multiply Place times "None"  
  
Error processing trigger "new frame":  
TypeError: Cannot multiply Place times "None"  
  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\geometry\place.py", line 125, in __mul__  
raise TypeError('Cannot multiply Place times "%s"' % str(p))  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\core\triggerset.py", line 134, in invoke  
return self._func(self._name, data)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\core\commands\motion.py", line 38, in __call__  
self.func(self.session, f)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\std_commands\turn.py", line 132, in turn_step  
self._move(r, invert=undo)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\std_commands\turn.py", line 120, in _move  
m.positions = r * m.positions  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\geometry\place.py", line 125, in __mul__  
raise TypeError('Cannot multiply Place times "%s"' % str(p))  
TypeError: Cannot multiply Place times "None"  
  
Error processing trigger "new frame":  
TypeError: Cannot multiply Place times "None"  
  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\geometry\place.py", line 125, in __mul__  
raise TypeError('Cannot multiply Place times "%s"' % str(p))  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\core\triggerset.py", line 134, in invoke  
return self._func(self._name, data)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\core\commands\motion.py", line 38, in __call__  
self.func(self.session, f)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\std_commands\turn.py", line 132, in turn_step  
self._move(r, invert=undo)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\std_commands\turn.py", line 120, in _move  
m.positions = r * m.positions  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\geometry\place.py", line 125, in __mul__  
raise TypeError('Cannot multiply Place times "%s"' % str(p))  
TypeError: Cannot multiply Place times "None"  
  
Error processing trigger "new frame":  
TypeError: Cannot multiply Place times "None"  
  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\geometry\place.py", line 125, in __mul__  
raise TypeError('Cannot multiply Place times "%s"' % str(p))  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\core\triggerset.py", line 134, in invoke  
return self._func(self._name, data)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\core\commands\motion.py", line 38, in __call__  
self.func(self.session, f)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\std_commands\turn.py", line 132, in turn_step  
self._move(r, invert=undo)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\std_commands\turn.py", line 120, in _move  
m.positions = r * m.positions  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\geometry\place.py", line 125, in __mul__  
raise TypeError('Cannot multiply Place times "%s"' % str(p))  
TypeError: Cannot multiply Place times "None"  
  
Error processing trigger "new frame":  
TypeError: Cannot multiply Place times "None"  
  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\geometry\place.py", line 125, in __mul__  
raise TypeError('Cannot multiply Place times "%s"' % str(p))  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\core\triggerset.py", line 134, in invoke  
return self._func(self._name, data)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\core\commands\motion.py", line 38, in __call__  
self.func(self.session, f)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\std_commands\turn.py", line 132, in turn_step  
self._move(r, invert=undo)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\std_commands\turn.py", line 120, in _move  
m.positions = r * m.positions  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\geometry\place.py", line 125, in __mul__  
raise TypeError('Cannot multiply Place times "%s"' % str(p))  
TypeError: Cannot multiply Place times "None"  
  
Error processing trigger "new frame":  
TypeError: Cannot multiply Place times "None"  
  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\geometry\place.py", line 125, in __mul__  
raise TypeError('Cannot multiply Place times "%s"' % str(p))  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\core\triggerset.py", line 134, in invoke  
return self._func(self._name, data)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\core\commands\motion.py", line 38, in __call__  
self.func(self.session, f)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\std_commands\turn.py", line 132, in turn_step  
self._move(r, invert=undo)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\std_commands\turn.py", line 120, in _move  
m.positions = r * m.positions  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\geometry\place.py", line 125, in __mul__  
raise TypeError('Cannot multiply Place times "%s"' % str(p))  
TypeError: Cannot multiply Place times "None"  
  
Error processing trigger "new frame":  
TypeError: Cannot multiply Place times "None"  
  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\geometry\place.py", line 125, in __mul__  
raise TypeError('Cannot multiply Place times "%s"' % str(p))  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\core\triggerset.py", line 134, in invoke  
return self._func(self._name, data)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\core\commands\motion.py", line 38, in __call__  
self.func(self.session, f)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\std_commands\turn.py", line 132, in turn_step  
self._move(r, invert=undo)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\std_commands\turn.py", line 120, in _move  
m.positions = r * m.positions  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\geometry\place.py", line 125, in __mul__  
raise TypeError('Cannot multiply Place times "%s"' % str(p))  
TypeError: Cannot multiply Place times "None"  
  
Error processing trigger "new frame":  
TypeError: Cannot multiply Place times "None"  
  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\geometry\place.py", line 125, in __mul__  
raise TypeError('Cannot multiply Place times "%s"' % str(p))  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\core\triggerset.py", line 134, in invoke  
return self._func(self._name, data)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\core\commands\motion.py", line 38, in __call__  
self.func(self.session, f)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\std_commands\turn.py", line 132, in turn_step  
self._move(r, invert=undo)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\std_commands\turn.py", line 120, in _move  
m.positions = r * m.positions  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\geometry\place.py", line 125, in __mul__  
raise TypeError('Cannot multiply Place times "%s"' % str(p))  
TypeError: Cannot multiply Place times "None"  
  
Error processing trigger "new frame":  
TypeError: Cannot multiply Place times "None"  
  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\geometry\place.py", line 125, in __mul__  
raise TypeError('Cannot multiply Place times "%s"' % str(p))  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\core\triggerset.py", line 134, in invoke  
return self._func(self._name, data)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\core\commands\motion.py", line 38, in __call__  
self.func(self.session, f)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\std_commands\turn.py", line 132, in turn_step  
self._move(r, invert=undo)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\std_commands\turn.py", line 120, in _move  
m.positions = r * m.positions  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\geometry\place.py", line 125, in __mul__  
raise TypeError('Cannot multiply Place times "%s"' % str(p))  
TypeError: Cannot multiply Place times "None"  
  
Error processing trigger "new frame":  
TypeError: Cannot multiply Place times "None"  
  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\geometry\place.py", line 125, in __mul__  
raise TypeError('Cannot multiply Place times "%s"' % str(p))  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\core\triggerset.py", line 134, in invoke  
return self._func(self._name, data)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\core\commands\motion.py", line 38, in __call__  
self.func(self.session, f)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\std_commands\turn.py", line 132, in turn_step  
self._move(r, invert=undo)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\std_commands\turn.py", line 120, in _move  
m.positions = r * m.positions  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\geometry\place.py", line 125, in __mul__  
raise TypeError('Cannot multiply Place times "%s"' % str(p))  
TypeError: Cannot multiply Place times "None"  
  
Error processing trigger "new frame":  
TypeError: Cannot multiply Place times "None"  
  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\geometry\place.py", line 125, in __mul__  
raise TypeError('Cannot multiply Place times "%s"' % str(p))  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\core\triggerset.py", line 134, in invoke  
return self._func(self._name, data)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\core\commands\motion.py", line 38, in __call__  
self.func(self.session, f)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\std_commands\turn.py", line 132, in turn_step  
self._move(r, invert=undo)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\std_commands\turn.py", line 120, in _move  
m.positions = r * m.positions  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\geometry\place.py", line 125, in __mul__  
raise TypeError('Cannot multiply Place times "%s"' % str(p))  
TypeError: Cannot multiply Place times "None"  
  
Error processing trigger "new frame":  
TypeError: Cannot multiply Place times "None"  
  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\geometry\place.py", line 125, in __mul__  
raise TypeError('Cannot multiply Place times "%s"' % str(p))  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\core\triggerset.py", line 134, in invoke  
return self._func(self._name, data)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\core\commands\motion.py", line 38, in __call__  
self.func(self.session, f)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\std_commands\turn.py", line 132, in turn_step  
self._move(r, invert=undo)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\std_commands\turn.py", line 120, in _move  
m.positions = r * m.positions  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\geometry\place.py", line 125, in __mul__  
raise TypeError('Cannot multiply Place times "%s"' % str(p))  
TypeError: Cannot multiply Place times "None"  
  
Error processing trigger "new frame":  
TypeError: Cannot multiply Place times "None"  
  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\geometry\place.py", line 125, in __mul__  
raise TypeError('Cannot multiply Place times "%s"' % str(p))  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\core\triggerset.py", line 134, in invoke  
return self._func(self._name, data)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\core\commands\motion.py", line 38, in __call__  
self.func(self.session, f)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\std_commands\turn.py", line 132, in turn_step  
self._move(r, invert=undo)  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\std_commands\turn.py", line 120, in _move  
m.positions = r * m.positions  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\geometry\place.py", line 125, in __mul__  
raise TypeError('Cannot multiply Place times "%s"' % str(p))  
TypeError: Cannot multiply Place times "None"  
  
Error processing trigger "new frame":  
TypeError: Cannot multiply Place times "None"  
  
File "C:\Program Files\ChimeraX 1.4\bin\lib\site-
packages\chimerax\geometry\place.py", line 125, in __mul__  
raise TypeError('Cannot multiply Place times "%s"' % str(p))  
  
See log for complete Python traceback.  
  




OpenGL version: 3.3.0 NVIDIA 516.94
OpenGL renderer: Quadro P5000/PCIe/SSE2
OpenGL vendor: NVIDIA Corporation

Python: 3.9.11
Locale: en_US.cp1252
Qt version: PyQt6 6.3.0, Qt 6.3.0
Qt runtime version: 6.3.0
Qt platform: windows

Manufacturer: To Be Filled By O.E.M.
Model: B550M-C
OS: Microsoft Windows 11 Enterprise (Build 22000)
Memory: 17,047,228,416
MaxProcessMemory: 137,438,953,344
CPU: 16 AMD Ryzen 7 5700                               
OSLanguage: en-US

Installed Packages:
    alabaster: 0.7.12
    appdirs: 1.4.4
    Babel: 2.10.1
    backcall: 0.2.0
    blockdiag: 3.0.0
    certifi: 2022.5.18.1
    cftime: 1.6.0
    charset-normalizer: 2.0.12
    ChimeraX-AddCharge: 1.2.3
    ChimeraX-AddH: 2.1.11
    ChimeraX-AlignmentAlgorithms: 2.0
    ChimeraX-AlignmentHdrs: 3.2.1
    ChimeraX-AlignmentMatrices: 2.0
    ChimeraX-Alignments: 2.4.3
    ChimeraX-AlphaFold: 1.0
    ChimeraX-AltlocExplorer: 1.0.2
    ChimeraX-AmberInfo: 1.0
    ChimeraX-Arrays: 1.0
    ChimeraX-Atomic: 1.39.1
    ChimeraX-AtomicLibrary: 7.0
    ChimeraX-AtomSearch: 2.0.1
    ChimeraX-AxesPlanes: 2.1
    ChimeraX-BasicActions: 1.1
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 2.1.1
    ChimeraX-BondRot: 2.0
    ChimeraX-BugReporter: 1.0
    ChimeraX-BuildStructure: 2.7
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.1
    ChimeraX-ButtonPanel: 1.0
    ChimeraX-CageBuilder: 1.0
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.2
    ChimeraX-ChemGroup: 2.0
    ChimeraX-Clashes: 2.2.4
    ChimeraX-ColorActions: 1.0
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-ColorKey: 1.5.1
    ChimeraX-CommandLine: 1.2.3
    ChimeraX-ConnectStructure: 2.0.1
    ChimeraX-Contacts: 1.0
    ChimeraX-Core: 1.4
    ChimeraX-CoreFormats: 1.1
    ChimeraX-coulombic: 1.3.2
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-CrystalContacts: 1.0
    ChimeraX-DataFormats: 1.2.2
    ChimeraX-Dicom: 1.1
    ChimeraX-DistMonitor: 1.1.5
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ExperimentalCommands: 1.0
    ChimeraX-FileHistory: 1.0
    ChimeraX-FunctionKey: 1.0
    ChimeraX-Geometry: 1.2
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.1
    ChimeraX-Hbonds: 2.1.2
    ChimeraX-Help: 1.2
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.1
    ChimeraX-ImageFormats: 1.2
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0.1
    ChimeraX-ItemsInspection: 1.0
    ChimeraX-Label: 1.1.1
    ChimeraX-ListInfo: 1.1.1
    ChimeraX-Log: 1.1.5
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Maestro: 1.8.1
    ChimeraX-Map: 1.1
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0
    ChimeraX-MapFilter: 2.0
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.1
    ChimeraX-Markers: 1.0
    ChimeraX-Mask: 1.0
    ChimeraX-MatchMaker: 2.0.6
    ChimeraX-MDcrds: 2.6
    ChimeraX-MedicalToolbar: 1.0.1
    ChimeraX-Meeting: 1.0
    ChimeraX-MLP: 1.1
    ChimeraX-mmCIF: 2.7
    ChimeraX-MMTF: 2.1
    ChimeraX-Modeller: 1.5.5
    ChimeraX-ModelPanel: 1.3.2
    ChimeraX-ModelSeries: 1.0
    ChimeraX-Mol2: 2.0
    ChimeraX-Morph: 1.0
    ChimeraX-MouseModes: 1.1
    ChimeraX-Movie: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nucleotides: 2.0.2
    ChimeraX-OpenCommand: 1.9
    ChimeraX-PDB: 2.6.6
    ChimeraX-PDBBio: 1.0
    ChimeraX-PDBLibrary: 1.0.2
    ChimeraX-PDBMatrices: 1.0
    ChimeraX-PickBlobs: 1.0
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.1
    ChimeraX-PubChem: 2.1
    ChimeraX-ReadPbonds: 1.0.1
    ChimeraX-Registration: 1.1
    ChimeraX-RemoteControl: 1.0
    ChimeraX-ResidueFit: 1.0
    ChimeraX-RestServer: 1.1
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 2.0.1
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.5.1
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0
    ChimeraX-SelInspector: 1.0
    ChimeraX-SeqView: 2.6
    ChimeraX-Shape: 1.0.1
    ChimeraX-Shell: 1.0
    ChimeraX-Shortcuts: 1.1
    ChimeraX-ShowAttr: 1.0
    ChimeraX-ShowSequences: 1.0
    ChimeraX-SideView: 1.0
    ChimeraX-Smiles: 2.1
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.8
    ChimeraX-STL: 1.0
    ChimeraX-Storm: 1.0
    ChimeraX-StructMeasure: 1.0.1
    ChimeraX-Struts: 1.0.1
    ChimeraX-Surface: 1.0
    ChimeraX-SwapAA: 2.0
    ChimeraX-SwapRes: 2.1.1
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.1.1
    ChimeraX-ToolshedUtils: 1.2.1
    ChimeraX-Tug: 1.0
    ChimeraX-UI: 1.18.3
    ChimeraX-uniprot: 2.2
    ChimeraX-UnitCell: 1.0
    ChimeraX-ViewDockX: 1.1.2
    ChimeraX-VIPERdb: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0
    ChimeraX-WebServices: 1.1.0
    ChimeraX-Zone: 1.0
    colorama: 0.4.4
    comtypes: 1.1.10
    cxservices: 1.2
    cycler: 0.11.0
    Cython: 0.29.26
    debugpy: 1.6.0
    decorator: 5.1.1
    docutils: 0.17.1
    entrypoints: 0.4
    filelock: 3.4.2
    fonttools: 4.33.3
    funcparserlib: 1.0.0
    grako: 3.16.5
    h5py: 3.7.0
    html2text: 2020.1.16
    idna: 3.3
    ihm: 0.27
    imagecodecs: 2021.11.20
    imagesize: 1.3.0
    ipykernel: 6.6.1
    ipython: 7.31.1
    ipython-genutils: 0.2.0
    jedi: 0.18.1
    Jinja2: 3.0.3
    jupyter-client: 7.1.0
    jupyter-core: 4.10.0
    kiwisolver: 1.4.2
    line-profiler: 3.4.0
    lxml: 4.7.1
    lz4: 3.1.10
    MarkupSafe: 2.1.1
    matplotlib: 3.5.1
    matplotlib-inline: 0.1.3
    msgpack: 1.0.3
    nest-asyncio: 1.5.5
    netCDF4: 1.5.8
    networkx: 2.6.3
    numexpr: 2.8.1
    numpy: 1.22.1
    openvr: 1.16.802
    packaging: 21.3
    ParmEd: 3.4.3
    parso: 0.8.3
    pickleshare: 0.7.5
    Pillow: 9.0.1
    pip: 21.3.1
    pkginfo: 1.8.2
    prompt-toolkit: 3.0.29
    psutil: 5.9.0
    pycollada: 0.7.2
    pydicom: 2.2.2
    Pygments: 2.11.2
    PyOpenGL: 3.1.5
    PyOpenGL-accelerate: 3.1.5
    pyparsing: 3.0.9
    PyQt6-commercial: 6.3.0
    PyQt6-Qt6: 6.3.0
    PyQt6-sip: 13.3.1
    PyQt6-WebEngine-commercial: 6.3.0
    PyQt6-WebEngine-Qt6: 6.3.0
    python-dateutil: 2.8.2
    pytz: 2022.1
    pywin32: 303
    pyzmq: 23.1.0
    qtconsole: 5.3.0
    QtPy: 2.1.0
    RandomWords: 0.3.0
    requests: 2.27.1
    scipy: 1.7.3
    setuptools: 59.8.0
    sfftk-rw: 0.7.2
    six: 1.16.0
    snowballstemmer: 2.2.0
    sortedcontainers: 2.4.0
    Sphinx: 4.3.2
    sphinx-autodoc-typehints: 1.15.2
    sphinxcontrib-applehelp: 1.0.2
    sphinxcontrib-blockdiag: 3.0.0
    sphinxcontrib-devhelp: 1.0.2
    sphinxcontrib-htmlhelp: 2.0.0
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 1.0.3
    sphinxcontrib-serializinghtml: 1.1.5
    suds-community: 1.0.0
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    tifffile: 2021.11.2
    tinyarray: 1.2.4
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    wcwidth: 0.2.5
    webcolors: 1.11.1
    wheel: 0.37.1
    wheel-filename: 1.3.0
    WMI: 1.5.1

Change History (2)

comment:1 by Eric Pettersen, 3 years ago

Component: Unassigned → Sessions
Owner: set to Tom Goddard
Platform: → all
Project: → ChimeraX
Status: new → assigned
Summary: ChimeraX bug report submission → "close session" with multiple models rotating: Cannot multiply Place times "None"

comment:2 by Tom Goddard, 3 years ago

Resolution: → fixed
Status: assigned → closed

Fixed.

Closing a model when that model was being rotated with a command like "roll model #1" caused an error when it tried to change the position of the deleted model. Made rotation code ignore the deleted model.

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