Opened 3 years ago
Closed 3 years ago
#7635 closed defect (can't reproduce)
Crash using File→Open on Windows and/or in return statement
Reported by: | Owned by: | Eric Pettersen | |
---|---|---|---|
Priority: | normal | Milestone: | |
Component: | Platform | Version: | |
Keywords: | Cc: | Tom Goddard | |
Blocked By: | Blocking: | ||
Notify when closed: | Platform: | all | |
Project: | ChimeraX |
Description (last modified by )
The following bug report has been submitted: Platform: Windows-10-10.0.19043 ChimeraX Version: 1.3rc202111060828 (2021-11-06 08:28:15 UTC) Description Last time you used ChimeraX it crashed. Please describe steps that led to the crash here. Windows fatal exception: code 0x8001010e Thread 0x000052f8 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 576 in _handle_results File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line Windows fatal exception: code 0x8001010e 973 in _bootstrap_innerWindows fatal exception: code 0x8001010e File "C:\Windows fatal exception: code 0x8001010e ProWindows fatal exception: code 0x8001010e Windows fatal exception: code 0x8001010eWindows fatal exception: code 0x8001010e Windows fatal exception: gr Windows fatal exception: code 0x8001010e code 0xWindows fatal exception: 8001010ecode 0xam 8001010eWindows fatal exception: code 0xWindows fatal exception: Fcode 0x8001010e iWindows fatal exception: 8001010ecode 0xle 8001010eWindows fatal exception: sWindows fatal exception: code 0x8001010e\Ccode 0x8001010e hWindows fatal exception: im code 0xWindows fatal exception: eraX 1code 0x8001010e8001010e Windows fatal exception: Windows fatal exception: .3code 0x8001010ecode 0x rc8001010e2 0Windows fatal exception: code 0x28001010e 11Windows fatal exception: code 0x18001010e 06Windows fatal exception: code 0x08001010e 82Windows fatal exception: code 0x8001010e8\ bin\lib\threading.py", line 930 in _bootstrap Thread 0x000052f4 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 528 in _handle_tasks File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000052f0Windows fatal exception: code 0x (most recent call first): 8001010e File "Windows fatal exception: code 0xC:8001010e \Windows fatal exception: code 0xPr8001010e oWindows fatal exception: code 0xgr8001010e aWindows fatal exception: code 0xm 8001010e FWindows fatal exception: code 0xil8001010e eWindows fatal exception: code 0xs8001010e \CWindows fatal exception: code 0xh8001010e imWindows fatal exception: code 0xe8001010e rWindows fatal exception: code 0xa8001010e XWindows fatal exception: code 0x 8001010e 1.3rc202111060828\bin\lib\multiprocessing\connection.py", line 816 in _exhaustive_wait File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\connection.py", line 884 in wait File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 499 in _wait_for_updates File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 519 in _handle_workers File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py"Windows fatal exception: code 0x, line 9108001010e in rWindows fatal exception: code 0xun8001010e Windows fatal exception: code 0x File "8001010e CWindows fatal exception: code 0x:\8001010e PWindows fatal exception: code 0xro8001010e gWindows fatal exception: code 0xra8001010e mWindows fatal exception: code 0x F8001010e iWindows fatal exception: code 0xle8001010e sWindows fatal exception: code 0x\C8001010e hWindows fatal exception: code 0xim8001010e eWindows fatal exception: code 0xra8001010e X 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000052d8 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimWindows fatal exception: code 0xe8001010er aXWindows fatal exception: code 0x18001010e. 3rWindows fatal exception: ccode 0x28001010e 0Windows fatal exception: 2code 0x18001010e1 1Windows fatal exception: 0code 0x68001010e0 8Windows fatal exception: 2code 0x88001010e\ bWindows fatal exception: icode 0xn8001010e\ lWindows fatal exception: icode 0xb8001010e\ tWindows fatal exception: hcode 0xr8001010ee aWindows fatal exception: dcode 0xi8001010en gWindows fatal exception: .pcode 0x8001010ey" , line 930 in _bootstrap Thread 0x000052dc (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000052a4 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.pyWindows fatal exception: code 0x", line 114 in worker8001010e Windows fatal exception: code 0x File "8001010e CWindows fatal exception: :\code 0x8001010ePr oWindows fatal exception: grcode 0x8001010eam Windows fatal exception: Ficode 0xle8001010es\ CWindows fatal exception: hcode 0xim8001010eer aWindows fatal exception: X code 0x1.8001010e3r cWindows fatal exception: 20code 0x218001010e11 0Windows fatal exception: 6code 0x08001010e8 2Windows fatal exception: 8\code 0x8001010ebi nWindows fatal exception: \lcode 0x8001010eib \threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000016a8 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910Windows fatal exception: code 0x in 8001010e runWindows fatal exception: code 0x File 8001010e" C:Windows fatal exception: \code 0xP8001010er ogWindows fatal exception: rcode 0xa8001010em FWindows fatal exception: icode 0xl8001010ee s\Windows fatal exception: code 0xC8001010eh imWindows fatal exception: code 0x8001010e eraXWindows fatal exception: code 0x8001010e 1.3rWindows fatal exception: code 0xc8001010e2 02Windows fatal exception: 1code 0x18001010e1 06Windows fatal exception: 0code 0x88001010e2 8\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x00003420 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChiWindows fatal exception: code 0xme8001010e raWindows fatal exception: code 0xX 8001010e 1.Windows fatal exception: code 0x3r8001010e c2Windows fatal exception: 0code 0x28001010e1 11Windows fatal exception: 0code 0x68001010e0 8Windows fatal exception: 2code 0x88001010e\ bWindows fatal exception: icode 0xn8001010e\ lWindows fatal exception: icode 0xb8001010e\ tWindows fatal exception: hrecode 0x8001010e adWindows fatal exception: incode 0xg.8001010epy ", line Windows fatal exception: 930 in code 0x_b8001010eoo tstrap Thread 0x0000096c (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000048c8 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\binWindows fatal exception: code 0x\l8001010e ib\Windows fatal exception: code 0xmu8001010e ltWindows fatal exception: code 0xip8001010e roWindows fatal exception: code 0xce8001010e ssWindows fatal exception: code 0xin8001010e g\pWindows fatal exception: code 0xoo8001010e l.Windows fatal exception: code 0xp8001010e y"Windows fatal exception: code 0x, line 1148001010e in wWindows fatal exception: code 0xo8001010e rkWindows fatal exception: code 0xe8001010e r Windows fatal exception: code 0x File 8001010e "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x00001c70 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program FileWindows fatal exception: code 0xs8001010e\ ChiWindows fatal exception: mcode 0xe8001010er aXWindows fatal exception: code 0x18001010e. 3rWindows fatal exception: ccode 0x28001010e0 2Windows fatal exception: 1code 0x18001010e1 0Windows fatal exception: 6code 0x08001010e8 2Windows fatal exception: 8code 0x\8001010eb iWindows fatal exception: ncode 0x\8001010el iWindows fatal exception: bcode 0x\8001010et hWindows fatal exception: rcode 0xe8001010ea dWindows fatal exception: icode 0xn8001010eg .py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000038e8 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 867 in initWindows fatal exception: code 0x File 8001010e "C:Windows fatal exception: code 0x\P8001010e roWindows fatal exception: code 0xgr8001010e amWindows fatal exception: code 0x F8001010e ileWindows fatal exception: code 0xs\8001010e CWindows fatal exception: hicode 0xme8001010era XWindows fatal exception: 1code 0x.38001010erc Windows fatal exception: code 0x8001010e Windows fatal exception: code 0x8001010e20 2Windows fatal exception: code 0x1118001010e 06Windows fatal exception: 08code 0x8001010e28 \bin\lib\site-packages\ChimeraX_main.py", line 1018 in File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 87 in _run_code File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 197 in _run_module_as_main Windows fatal exception: code 0x8001010e Thread 0x000052f8 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 576 in _handle_results File "C:\Windows fatal exception: code 0xPr8001010e ogWindows fatal exception: code 0xra8001010e m Windows fatal exception: code 0xFi8001010e lWindows fatal exception: code 0xes8001010e \Windows fatal exception: code 0xCh8001010e Windows fatal exception: code 0x8001010e iWindows fatal exception: code 0xm8001010e erWindows fatal exception: code 0xaX 1.38001010e rcWindows fatal exception: 20code 0x8001010e Windows fatal exception: 21code 0x8001010e11 0Windows fatal exception: 60code 0x8001010e82 8\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000052f4 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 528 in _handle_taskWindows fatal exception: code 0xs 8001010e File "Windows fatal exception: code 0xC:8001010e \Windows fatal exception: code 0xPr8001010e ogWindows fatal exception: code 0xra8001010e mWindows fatal exception: code 0x F8001010e iWindows fatal exception: code 0xle8001010e sWindows fatal exception: code 0x\C8001010e hiWindows fatal exception: code 0xme8001010e raWindows fatal exception: code 0x8001010e X Windows fatal exception: code 0x1.8001010e 3Windows fatal exception: code 0xrc8001010e 202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000052f0 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\connection.py", line 816 in _exhaustive_wait File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\connection.py", line 884 in wait File "C:\Program Files\ChimeraX 1.3rc202111060828\biWindows fatal exception: code 0xn\8001010e liWindows fatal exception: code 0xb\8001010e muWindows fatal exception: code 0xlt8001010e ipWindows fatal exception: rcode 0xo8001010ec esWindows fatal exception: scode 0xi8001010en g\Windows fatal exception: pcode 0xo8001010eo lWindows fatal exception: .code 0xp8001010ey "Windows fatal exception: , line code 0x4998001010e in _Windows fatal exception: wcode 0xa8001010ei tWindows fatal exception: _code 0xf8001010eo r_Windows fatal exception: ucode 0xp8001010edate s File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 519 in _handle_workers File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000052d8 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rcWindows fatal exception: code 0x208001010e 211Windows fatal exception: code 0x108001010e 6Windows fatal exception: code 0x088001010e 2Windows fatal exception: code 0x8\8001010e bWindows fatal exception: code 0xin8001010e \Windows fatal exception: code 0xli8001010e bWindows fatal exception: code 0x\th8001010e rWindows fatal exception: code 0xea8001010e dWindows fatal exception: code 0xin8001010e gWindows fatal exception: code 0x.p8001010e y"Windows fatal exception: code 0x, line 910 in 8001010e run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000052dc (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc2021110Windows fatal exception: code 0x608001010e 82Windows fatal exception: code 0x8\8001010e biWindows fatal exception: code 0xn\8001010e lWindows fatal exception: code 0xib8001010e \Windows fatal exception: code 0xthr8001010e eWindows fatal exception: code 0xad8001010e iWindows fatal exception: code 0xng8001010e .Windows fatal exception: code 0xpy8001010e "Windows fatal exception: code 0x, line 9738001010e in Windows fatal exception: code 0x_b8001010e oWindows fatal exception: code 0xot8001010e strap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000052a4 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000016a8 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x00003420 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line Windows fatal exception: code 0x8001010e 114Windows fatal exception: in code 0xw8001010eo rWindows fatal exception: kcode 0xe8001010er Windows fatal exception: File code 0x"8001010eC :Windows fatal exception: \code 0xP8001010er oWindows fatal exception: gcode 0xr8001010ea mWindows fatal exception: code 0xF8001010ei lWindows fatal exception: ecode 0xs8001010e\ CWindows fatal exception: hcode 0xi8001010em eWindows fatal exception: rcode 0xa8001010eX Windows fatal exception: 1code 0x.8001010e3 rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x0000096c (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threadiWindows fatal exception: code 0x8001010e nWindows fatal exception: code 0xg.8001010e pyWindows fatal exception: code 0x", line 8001010e 910Windows fatal exception: in rcode 0xun8001010e File "Windows fatal exception: C:code 0x\P8001010ero gWindows fatal exception: racode 0xm 8001010eFi lWindows fatal exception: escode 0x\C8001010ehiWindows fatal exception: code 0x8001010e mWindows fatal exception: er code 0x8001010eaXWindows fatal exception: code 0x 8001010e Windows fatal exception: 1 .Windows fatal exception: 3code 0xrcode 0xc8001010e28001010e0 2 Windows fatal exception: Windows fatal exception: code 0xcode 0x8001010e8001010e Windows fatal exception: Windows fatal exception: code 0xcode 0x8001010e8001010e 11Windows fatal exception: code 0x108001010e 6Windows fatal exception: code 0x088001010e 2Windows fatal exception: 8\code 0x8001010ebi n\Windows fatal exception: code 0xli8001010e bWindows fatal exception: \tcode 0x8001010ehr eWindows fatal exception: adcode 0x8001010ein g.py", line 973 in _bootWindows fatal exception: code 0xs8001010et raWindows fatal exception: pcode 0x_8001010ei nnWindows fatal exception: ecode 0xr8001010e File "Windows fatal exception: Ccode 0x:8001010e\ PWindows fatal exception: rcode 0xo8001010eg rWindows fatal exception: acode 0xm8001010e FWindows fatal exception: icode 0xl8001010ee sWindows fatal exception: \code 0xC8001010ehWindows fatal exception: code 0x 8001010eim Windows fatal exception: code 0xe8001010er aXWindows fatal exception: code 0xWindows fatal exception: code 0x 18001010e 8001010e .Windows fatal exception: 3code 0xr8001010ec 20Windows fatal exception: code 0x218001010e 11Windows fatal exception: code 0x06Windows fatal exception: code 0x8001010e088001010e Windows fatal exception: Windows fatal exception: code 0x8001010e 28\Windows fatal exception: code 0x8001010ebicode 0x8001010e n\liWindows fatal exception: code 0x8001010e bWindows fatal exception: code 0x8001010e \Windows fatal exception: code 0x8001010e tWindows fatal exception: code 0xhr 8001010eWindows fatal exception: code 0x ea8001010e dWindows fatal exception: iWindows fatal exception: code 0xngcode 0x8001010e8001010e .pyWindows fatal exception: code 0x ", line Windows fatal exception: code 0x8001010e 930 in Windows fatal exception: code 0x8001010e_b8001010e Windows fatal exception: oocode 0x8001010ets tWindows fatal exception: code 0xra8001010e pWindows fatal exception: code 0x 8001010e Thread 0xWindows fatal exception: code 0x000048c8 (most recent call first): 8001010e File "C:\Program Files\ChimeraX 1.3rc20211106082Windows fatal exception: code 0x8\8001010ebi n\Windows fatal exception: licode 0xb\8001010emul tiWindows fatal exception: pcode 0xr8001010eWindows fatal exception: code 0x8001010e oWindows fatal exception: ce code 0xWindows fatal exception: 8001010e ssWindows fatal exception: code 0xcode 0x8001010eing\pool8001010e Windows fatal exception: .Windows fatal exception: code 0xcode 0x8001010e8001010e pWindows fatal exception: ycode 0x"8001010e, line Windows fatal exception: Windows fatal exception: 114code 0x in 8001010ew code 0xWindows fatal exception: code 0x8001010e8001010eo Windows fatal exception: rkcode 0xWindows fatal exception: ecode 0xr8001010e File 8001010e "CWindows fatal exception: code 0xWindows fatal exception: 8001010ecode 0x:\ 8001010eWindows fatal exception: Pr ocode 0xWindows fatal exception: gr8001010ea mWindows fatal exception: code 0xFcode 0x8001010e8001010e iWindows fatal exception: leWindows fatal exception: scode 0x\8001010eC hcode 0x8001010eim eraX 1.3rWindows fatal exception: code 0xc28001010e 02Windows fatal exception: code 0x18001010e 11Windows fatal exception: code 0x08001010e 60Windows fatal exception: code 0x88001010e 28Windows fatal exception: code 0x\8001010e biWindows fatal exception: code 0xn8001010e \lWindows fatal exception: code 0xib8001010e \tWindows fatal exception: code 0xhWindows fatal exception: code 0x8001010e reWindows fatal exception: acode 0xd8001010e 8001010e Windows fatal exception: ingcode 0x.Windows fatal exception: pcode 0xy8001010e" , line Windows fatal exception: 9108001010e in rWindows fatal exception: ucode 0xn8001010e code 0x File 8001010e" C :Windows fatal exception: \code 0xP8001010ero gWindows fatal exception: Windows fatal exception: code 0xr8001010ea mWindows fatal exception: code 0x8001010e code 0x8001010eF ilWindows fatal exception: code 0xWindows fatal exception: 8001010ecode 0x 8001010eWindows fatal exception: code 0xes8001010e\Windows fatal exception: Ccode 0x 8001010ehi mWindows fatal exception: ecode 0xrWindows fatal exception: a8001010eXcode 0x 18001010e. 3Windows fatal exception: rWindows fatal exception: ccode 0x2code 0x08001010e2 18001010e1 1Windows fatal exception: 0Windows fatal exception: 6code 0x08001010e8code 0x2 88001010e\ bWindows fatal exception: iWindows fatal exception: ncode 0x\8001010el icode 0x8001010eb \tWindows fatal exception: code 0xhWindows fatal exception: 8001010e recode 0x8001010eWindows fatal exception: code 0xWindows fatal exception: ad8001010e code 0xWindows fatal exception: 8001010ecode 0x 8001010eiWindows fatal exception: ncode 0x 8001010eg .pWindows fatal exception: ycode 0x"8001010e, line 973 in Windows fatal exception: code 0xWindows fatal exception: 8001010ecode 0x 8001010eWindows fatal exception: code 0x_Windows fatal exception: bcode 0x8001010e8001010e Windows fatal exception: Windows fatal exception: code 0xcode 0xo8001010eo tWindows fatal exception: scode 0xt8001010er 8001010eWindows fatal exception: acode 0xp8001010e_ iWindows fatal exception: ncode 0xn8001010ee Windows fatal exception: Windows fatal exception: code 0xcode 0x8001010er File 8001010e "Windows fatal exception: C:code 0x\P8001010erWindows fatal exception: code 0xo8001010eg rWindows fatal exception: acode 0xWindows fatal exception: code 0xm8001010e8001010e Windows fatal exception: code 0xFWindows fatal exception: code 0x8001010e8001010e Windows fatal exception: Windows fatal exception: icode 0xl8001010ecode 0x 8001010eWindows fatal exception: code 0xe8001010eWindows fatal exception: code 0xWindows fatal exception: 8001010ecode 0xs8001010e\ CWindows fatal exception: hWindows fatal exception: icode 0xcode 0x8001010e me8001010e rWindows fatal exception: code 0x8001010eaX 1Windows fatal exception: code 0x.38001010e rcWindows fatal exception: code 0x28001010e 02Windows fatal exception: code 0x18001010e1 10Windows fatal exception: code 0x68001010e 0828\bin\lib\threadinWindows fatal exception: code 0xg8001010e Windows fatal exception: Windows fatal exception: .code 0xcode 0x8001010ep y"8001010e Windows fatal exception: code 0xWindows fatal exception: 8001010ecode 0x 8001010eWindows fatal exception: , line 930 in Windows fatal exception: _code 0xbcode 0xo8001010eo8001010et sWindows fatal exception: tcode 0xr a8001010ep Windows fatal exception: Windows fatal exception: code 0xThread 0x8001010e00001c70code 0x (most recent call first): 8001010e File "Windows fatal exception: C :Windows fatal exception: \code 0xP8001010ercode 0x8001010e oWindows fatal exception: Windows fatal exception: code 0xgrcode 0xa8001010em8001010e F iWindows fatal exception: lcode 0xeWindows fatal exception: s8001010e\ CWindows fatal exception: hcode 0xicode 0xm8001010ee8001010e Windows fatal exception: Windows fatal exception: code 0xracode 0xX8001010e 8001010e Windows fatal exception: 1.Windows fatal exception: 3code 0x8001010ecode 0x rc8001010e2Windows fatal exception: 0 2code 0x18001010e1 1060828\bin\lib\mulWindows fatal exception: tcode 0xi8001010ep roWindows fatal exception: ccode 0xe8001010es sWindows fatal exception: icode 0xn8001010eg \Windows fatal exception: pcode 0xo8001010eo lWindows fatal exception: .code 0xp8001010ey Windows fatal exception: Windows fatal exception: "code 0xcode 0x8001010e, line 114 in 8001010e Windows fatal exception: code 0xWindows fatal exception: code 0xw8001010e8001010e oWindows fatal exception: Windows fatal exception: rkcode 0xecode 0x8001010e8001010e rWindows fatal exception: code 0x File 8001010e" CWindows fatal exception: :code 0xWindows fatal exception: code 0x8001010e\P8001010er Windows fatal exception: Windows fatal exception: code 0xcode 0x8001010eog8001010e Windows fatal exception: racode 0x8001010eWindows fatal exception: code 0xm 8001010eWindows fatal exception: Fi code 0x8001010el esWindows fatal exception: \code 0xC8001010eh iWindows fatal exception: code 0xmeWindows fatal exception: code 0x8001010e8001010e rWindows fatal exception: Windows fatal exception: code 0xcode 0xaX8001010e 18001010e .Windows fatal exception: code 0x3r8001010eWindows fatal exception: c2Windows fatal exception: code 0xcode 0x8001010e8001010e 0Windows fatal exception: 2Windows fatal exception: 11code 0x18001010e0code 0x8001010e 60Windows fatal exception: code 0x 8001010e8Windows fatal exception: 2code 0x88001010e \bWindows fatal exception: i code 0x8001010eWindows fatal exception: code 0xn8001010e \Windows fatal exception: lcode 0x Windows fatal exception: code 0x8001010e ib8001010e\ tWindows fatal exception: hcode 0xr8001010ee aWindows fatal exception: dWindows fatal exception: code 0xcode 0x8001010e8001010e Windows fatal exception: Windows fatal exception: code 0xincode 0xg8001010e. py8001010e ", line Windows fatal exception: code 0x910 in 8001010e Windows fatal exception: code 0xWindows fatal exception: code 0x8001010e8001010eru n Windows fatal exception: code 0xWindows fatal exception: 8001010ecode 0x 8001010e [lots of this deleted] Thread 0x00001c70 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000038e8 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 867 in init File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 1018 in File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 87 in _run_code File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 197 in _run_module_as_main Windows fatal exception: code 0x8001010e Thread 0x000052f8 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 576 in _handle_results File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000052f4 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 528 in _handle_tasks File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000052f0 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\connection.py", line 816 in _exhaustive_wait File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\connection.py", line 884 in wait File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 499 in _wait_for_updates File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 519 in _handle_workers File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000052d8 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000052dc (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000052a4 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000016a8 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x00003420 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x0000096c (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000048c8 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x00001c70 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000038e8 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 867 in init File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 1018 in File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 87 in _run_code File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 197 in _run_module_as_main Windows fatal exception: code 0x8001010e Thread 0x000052f8 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 576 in _handle_results File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000052f4 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 528 in _handle_tasks File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000052f0 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\connection.py", line 816 in _exhaustive_wait File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\connection.py", line 884 in wait File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 499 in _wait_for_updates File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 519 in _handle_workers File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000052d8 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000052dc (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000052a4 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000016a8 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x00003420 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x0000096c (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000048c8 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x00001c70 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000038e8 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 867 in init File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 1018 in File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 87 in _run_code File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 197 in _run_module_as_main Windows fatal exception: code 0x8001010e Thread 0x000052f8 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 576 in _handle_results File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000052f4 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 528 in _handle_tasks File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000052f0 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\connection.py", line 816 in _exhaustive_wait File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\connection.py", line 884 in wait File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 499 in _wait_for_updates File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 519 in _handle_workers File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000052d8 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000052dc (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000052a4 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000016a8 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x00003420 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x0000096c (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000048c8 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x00001c70 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000038e8 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 867 in init File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 1018 in File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 87 in _run_code File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 197 in _run_module_as_main Windows fatal exception: code 0x8001010e Thread 0x000052f8 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 576 in _handle_results File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000052f4 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 528 in _handle_tasks File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000052f0 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\connection.py", line 816 in _exhaustive_wait File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\connection.py", line 884 in wait File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 499 in _wait_for_updates File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 519 in _handle_workers File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000052d8 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000052dc (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000052a4 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000016a8 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x00003420 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x0000096c (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000048c8 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x00001c70 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000038e8 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 867 in init File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\ChimeraX_main.py", line 1018 in File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 87 in _run_code File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\runpy.py", line 197 in _run_module_as_main Windows fatal exception: code 0x8001010e Thread 0x000052f8 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 576 in _handle_results File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000052f4 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 528 in _handle_tasks File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000052f0 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\connection.py", line 816 in _exhaustive_wait File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\connection.py", line 884 in wait File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 499 in _wait_for_updates File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 519 in _handle_workers File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000052d8 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000052dc (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000052a4 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000016a8 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x00003420 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x0000096c (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000048c8 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x00001c70 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\multiprocessing\pool.py", line 114 in worker File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 910 in run File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 973 in _bootstrap_inner File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\threading.py", line 930 in _bootstrap Thread 0x000038e8 (most recent call first): File "C:\Program Files\ChimeraX 1.3rc202111060828\bin\lib\site-packages\chimerax\core\triggerset.py", line 187 in activate Windows fatal exception: access violation ===== Log before crash start ===== > open D:\Lab_Roh\Dicer\cryosparc_P6_J39_005_volume_map.mrc format mrc Opened cryosparc_P6_J39_005_volume_map.mrc as #1, grid size 256,256,256, pixel 0.87, shown at level 0.0467, step 1, values float32 > close session > open D:\Lab_Roh\Dicer\maps\cryosparc_P1_J1383_004_volume_map.mrc format mrc Opened cryosparc_P1_J1383_004_volume_map.mrc as #1, grid size 256,256,256, pixel 1.08, shown at level 0.0759, step 1, values float32 > close session > open D:\Lab_Roh\Dicer\maps\20220908_Dicer_maps.cxs format session Opened cryosparc_P63_J215_005_volume_map_sharp.mrc as #1, grid size 300,300,300, pixel 1.1, shown at level 0.12, step 1, values float32 Opened cryosparc_P1_J805_007_volume_map.mrc as #3, grid size 300,300,300, pixel 1.1, shown at step 1, values float32 Opened cryosparc_P1_J770_004_volume_map_sharp.mrc as #4, grid size 280,280,280, pixel 0.849, shown at level 0.158, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 0 as #6.1, grid size 300,300,300, pixel 1.1, shown at level 0.103, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 1 as #6.2, grid size 300,300,300, pixel 1.1, shown at level 0.0887, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 2 as #6.3, grid size 300,300,300, pixel 1.1, shown at level 0.0823, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 3 as #6.4, grid size 300,300,300, pixel 1.1, shown at level 0.0815, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 4 as #6.5, grid size 300,300,300, pixel 1.1, shown at level 0.103, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 5 as #6.6, grid size 300,300,300, pixel 1.1, shown at level 0.0967, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 6 as #6.7, grid size 300,300,300, pixel 1.1, shown at level 0.127, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 7 as #6.8, grid size 300,300,300, pixel 1.1, shown at level 0.103, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 8 as #6.9, grid size 300,300,300, pixel 1.1, shown at level 0.145, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 9 as #6.10, grid size 300,300,300, pixel 1.1, shown at level 0.0841, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 10 as #6.11, grid size 300,300,300, pixel 1.1, shown at level 0.144, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 11 as #6.12, grid size 300,300,300, pixel 1.1, shown at level 0.132, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 12 as #6.13, grid size 300,300,300, pixel 1.1, shown at level 0.109, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 13 as #6.14, grid size 300,300,300, pixel 1.1, shown at level 0.19, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 14 as #6.15, grid size 300,300,300, pixel 1.1, shown at level 0.0799, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc as #7, grid size 300,300,300, pixel 1.1, shown at level 0.0923, step 1, values float32 Opened cryosparc_P1_J1251_003_volume_map_sharp.mrc as #8, grid size 256,256,256, pixel 1.08, shown at level 0.101, step 1, values float32 Opened cryosparc_P1_J1251_003_volume_map_sharp.mrc z flip as #9, grid size 256,256,256, pixel 1.08, shown at level 0.112, step 1, values float32 Opened cryosparc_P1_J1261_002_volume_map.mrc as #10, grid size 256,256,256, pixel 1.08, shown at level 0.0102, step 1, values float32 Opened cryosparc_P1_J1261_002_volume_map_sharp.mrc as #11, grid size 256,256,256, pixel 1.08, shown at level 0.0546, step 1, values float32 Opened cryosparc_P1_J1265_002_volume_map.mrc as #12, grid size 256,256,256, pixel 1.08, shown at level 0.0884, step 1, values float32 Opened cryosparc_P1_J1299_004_volume_map.mrc as #14, grid size 256,256,256, pixel 1.08, shown at level 0.0659, step 1, values float32 Opened cryosparc_P1_J805_007_volume_map_sharp.mrc as #15, grid size 300,300,300, pixel 1.1, shown at level 0.107, step 1, values float32 Opened cryosparc_P1_J1321_005_volume_map.mrc as #16, grid size 256,256,256, pixel 1.08, shown at level 0.0596, step 1, values float32 Opened cryosparc_P1_J1325_006_volume_map.mrc as #17, grid size 256,256,256, pixel 1.08, shown at level 0.0563, step 1, values float32 Opened cryosparc_P1_J1325_006_volume_map.mrc z flip as #18, grid size 256,256,256, pixel 1.08, shown at level 0.051, step 1, values float32 Opened cryosparc_P1_J1342_004_volume_map.mrc as #19, grid size 256,256,256, pixel 1.08, shown at level 0.0675, step 1, values float32 Opened cryosparc_P1_J1370_004_volume_map.mrc as #20, grid size 256,256,256, pixel 1.08, shown at level 0.0426, step 1, values float32 Opened cryosparc_P1_J1370_004_volume_map.mrc z flip as #21, grid size 256,256,256, pixel 1.08, shown at level 0.109, step 1, values float32 Opened cryosparc_P1_J1355_003_volume_map.mrc as #22, grid size 256,256,256, pixel 1.08, shown at level 0.0603, step 1, values float32 Opened cryosparc_P1_J1383_004_volume_map.mrc as #23, grid size 256,256,256, pixel 1.08, shown at level 0.0488, step 1, values float32 Opened cryosparc_P1_J1390_004_volume_map.mrc as #24, grid size 256,256,256, pixel 1.08, shown at level 0.0682, step 1, values float32 opened ChimeraX session > close session > open D:\Lab_Roh\Dicer\maps\20220914_Dicer_maps.cxs format session Opened cryosparc_P63_J215_005_volume_map_sharp.mrc as #1, grid size 300,300,300, pixel 1.1, shown at level 0.12, step 1, values float32 Opened cryosparc_P1_J805_007_volume_map.mrc as #3, grid size 300,300,300, pixel 1.1, shown at step 1, values float32 Opened cryosparc_P1_J770_004_volume_map_sharp.mrc as #4, grid size 280,280,280, pixel 0.849, shown at level 0.158, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 0 as #6.1, grid size 300,300,300, pixel 1.1, shown at level 0.103, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 1 as #6.2, grid size 300,300,300, pixel 1.1, shown at level 0.0887, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 2 as #6.3, grid size 300,300,300, pixel 1.1, shown at level 0.0823, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 3 as #6.4, grid size 300,300,300, pixel 1.1, shown at level 0.0815, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 4 as #6.5, grid size 300,300,300, pixel 1.1, shown at level 0.103, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 5 as #6.6, grid size 300,300,300, pixel 1.1, shown at level 0.0967, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 6 as #6.7, grid size 300,300,300, pixel 1.1, shown at level 0.127, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 7 as #6.8, grid size 300,300,300, pixel 1.1, shown at level 0.103, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 8 as #6.9, grid size 300,300,300, pixel 1.1, shown at level 0.145, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 9 as #6.10, grid size 300,300,300, pixel 1.1, shown at level 0.0841, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 10 as #6.11, grid size 300,300,300, pixel 1.1, shown at level 0.144, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 11 as #6.12, grid size 300,300,300, pixel 1.1, shown at level 0.132, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 12 as #6.13, grid size 300,300,300, pixel 1.1, shown at level 0.109, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 13 as #6.14, grid size 300,300,300, pixel 1.1, shown at level 0.19, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 14 as #6.15, grid size 300,300,300, pixel 1.1, shown at level 0.0799, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc as #7, grid size 300,300,300, pixel 1.1, shown at level 0.0923, step 1, values float32 Opened cryosparc_P1_J1251_003_volume_map_sharp.mrc as #8, grid size 256,256,256, pixel 1.08, shown at level 0.101, step 1, values float32 Opened cryosparc_P1_J1251_003_volume_map_sharp.mrc z flip as #9, grid size 256,256,256, pixel 1.08, shown at level 0.112, step 1, values float32 Opened cryosparc_P1_J1261_002_volume_map.mrc as #10, grid size 256,256,256, pixel 1.08, shown at level 0.0102, step 1, values float32 Opened cryosparc_P1_J1261_002_volume_map_sharp.mrc as #11, grid size 256,256,256, pixel 1.08, shown at level 0.0546, step 1, values float32 Opened cryosparc_P1_J1265_002_volume_map.mrc as #12, grid size 256,256,256, pixel 1.08, shown at level 0.0884, step 1, values float32 Opened cryosparc_P1_J805_007_volume_map_sharp.mrc as #15, grid size 300,300,300, pixel 1.1, shown at level 0.107, step 1, values float32 Opened cryosparc_P1_J1370_004_volume_map.mrc as #20, grid size 256,256,256, pixel 1.08, shown at level 0.0914, step 1, values float32 Opened cryosparc_P1_J1383_004_volume_map.mrc as #23, grid size 256,256,256, pixel 1.08, shown at level 0.0664, step 1, values float32 Opened cryosparc_P1_J1390_004_volume_map.mrc as #24, grid size 256,256,256, pixel 1.08, shown at level 0.0553, step 1, values float32 Opened cryosparc_P1_J1370_004_volume_map.mrc z flip as #14, grid size 256,256,256, pixel 1.08, shown at level 0.0369, step 1, values float32 Opened cryosparc_P1_J1388_006_volume_map.mrc as #16, grid size 256,256,256, pixel 1.08, shown at level 0.0636, step 1, values float32 Opened emd_6905(5zal).map as #17, grid size 180,180,180, pixel 1.37, shown at level 0.0277, step 1, values float32 opened ChimeraX session > close session > open D:\Lab_Roh\Dicer\maps\cryosparc_P1_J1383_004_volume_map.mrc format mrc Opened cryosparc_P1_J1383_004_volume_map.mrc as #1, grid size 256,256,256, pixel 1.08, shown at level 0.0759, step 1, values float32 > open D:/Lab_Roh/Dicer/maps/emd_6905.map/emd_6905(5zal).map Opened emd_6905(5zal).map as #2, grid size 180,180,180, pixel 1.37, shown at level 0.0347, step 1, values float32 > select #2 2 models selected > ui mousemode right "translate selected models" > view matrix models #2,1,0,0,-20.279,0,1,0,-62.494,0,0,1,-3.8524 > ui mousemode right "rotate selected models" > view matrix models > #2,-0.8195,-0.54338,-0.18209,289.82,0.52074,-0.83872,0.15929,71.996,-0.23928,0.035718,0.97029,24.93 > view matrix models > #2,-0.83565,-0.41301,-0.36209,297.83,0.54443,-0.71013,-0.44645,126.04,-0.072743,-0.57021,0.81827,94.244 > view matrix models > #2,0.34853,-0.92244,-0.16622,188.93,0.83492,0.38613,-0.39218,-45.941,0.42595,-0.0020975,0.90474,-44.714 > view matrix models > #2,0.44782,-0.89407,0.0098593,152.36,0.88022,0.44276,0.17082,-125.31,-0.15709,-0.067818,0.98525,25.278 > view matrix models > #2,-0.23658,-0.87614,-0.42001,285.76,0.8915,-0.36763,0.26472,-41.982,-0.38634,-0.31181,0.86805,96.355 > view matrix models > #2,-0.26342,-0.79736,-0.54298,294.39,0.96412,-0.23673,-0.12011,-20.562,-0.032767,-0.55514,0.83111,86.008 > view matrix models > #2,-0.77315,-0.62438,-0.11128,285.26,0.62816,-0.72967,-0.27017,97.036,0.08749,-0.27879,0.95636,23.566 > ui mousemode right "translate selected models" > view matrix models > #2,-0.77315,-0.62438,-0.11128,313.62,0.62816,-0.72967,-0.27017,189.91,0.08749,-0.27879,0.95636,41.636 > ui tool show "Fit in Map" Fit map emd_6905(5zal).map in map cryosparc_P1_J1383_004_volume_map.mrc using 58265 points correlation = 0.9265, correlation about mean = 0.5204, overlap = 414.8 steps = 132, shift = 11.3, angle = 9.04 degrees Position of emd_6905(5zal).map (#2) relative to cryosparc_P1_J1383_004_volume_map.mrc (#1) coordinates: Matrix rotation and translation -0.67316591 -0.73528989 -0.07871770 321.20553127 0.73111062 -0.64577447 -0.22011957 156.97429129 0.11101781 -0.20572833 0.97229158 26.19016095 Axis 0.00973239 -0.12831286 0.99168598 Axis point 125.24846638 151.71825762 0.00000000 Rotation angle (degrees) 132.32416423 Shift along axis 8.95669368 > open D:/Lab_Roh/Dicer/maps/5zal.cif 5zal.cif title: Cryo-EM structure of human Dicer and its complexes with a pre-miRNA substrate [more info...] Chain information for 5zal.cif #3 --- Chain | Description | UniProt A | Endoribonuclease Dicer | DICER_HUMAN B | RISC-loading complex subunit TARBP2 | TRBP2_HUMAN C | RNA (73-mer) | Fit molecule 5zal.cif (#3) to map emd_6905(5zal).map (#2) using 12346 atoms average map value = 0.02464, steps = 252 shifted from previous position = 23.5 rotated from previous position = 48.9 degrees atoms outside contour = 8455, contour level = 0.03469 Position of 5zal.cif (#3) relative to emd_6905(5zal).map (#2) coordinates: Matrix rotation and translation -0.93539423 -0.00961598 0.35347579 187.01661013 -0.09726300 -0.95407477 -0.28333940 290.12675420 0.33996693 -0.29941416 0.89150077 8.56684642 Axis -0.17835666 0.14988686 -0.97248282 Axis point 96.08231239 143.55222800 0.00000000 Rotation angle (degrees) 177.41717524 Shift along axis 1.79941883 > ~select #2 Nothing selected > select #3 12346 atoms, 12712 bonds, 69 pseudobonds, 1447 residues, 3 models selected > view matrix models > #3,0.67443,0.73156,-0.099788,-29.929,-0.6959,0.67499,0.24517,21.133,0.24671,-0.095905,0.96433,-3.1257 > ui mousemode right "rotate selected models" > view matrix models > #3,-0.72666,-0.66924,-0.15517,316.27,0.64742,-0.59155,-0.48053,87.037,0.2298,-0.44964,0.86314,52.402 > ui mousemode right "translate selected models" > view matrix models > #3,-0.72666,-0.66924,-0.15517,331.68,0.64742,-0.59155,-0.48053,199.27,0.2298,-0.44964,0.86314,62.094 > ui mousemode right "rotate selected models" > view matrix models > #3,-0.77079,-0.59846,-0.21847,336.51,0.61922,-0.62309,-0.47784,206.17,0.14985,-0.5036,0.85085,79.906 > view matrix models > #3,-0.035566,-0.92959,-0.36687,300.59,0.95618,0.075096,-0.28297,59.032,0.2906,-0.36086,0.88619,41.337 > view matrix models > #3,-0.3445,-0.93194,-0.11314,309.37,0.87398,-0.27438,-0.40109,124.28,0.34275,-0.23706,0.90902,17.599 > view matrix models > #3,-0.34232,-0.93459,-0.096736,307.44,0.90856,-0.30301,-0.28759,109.73,0.23947,-0.18634,0.95286,19.411 > ui mousemode right "translate selected models" > view matrix models > #3,-0.34232,-0.93459,-0.096736,305.58,0.90856,-0.30301,-0.28759,97.384,0.23947,-0.18634,0.95286,11.588 > ui mousemode right "rotate selected models" > view matrix models > #3,-0.77609,-0.62053,-0.11236,325.23,0.61208,-0.69832,-0.37109,190.76,0.1518,-0.35677,0.92178,46.217 > view matrix models > #3,-0.77621,-0.62431,-0.087937,322.77,0.62772,-0.75228,-0.20011,174.69,0.058779,-0.21053,0.97582,34.364 Fit molecule 5zal.cif (#3) to map emd_6905(5zal).map (#2) using 12346 atoms average map value = 0.04952, steps = 80 shifted from previous position = 5.63 rotated from previous position = 8.9 degrees atoms outside contour = 3117, contour level = 0.03469 Position of 5zal.cif (#3) relative to emd_6905(5zal).map (#2) coordinates: Matrix rotation and translation 0.99999960 -0.00026366 -0.00082285 0.17014790 0.00026352 0.99999992 -0.00017103 -0.02026694 0.00082289 0.00017081 0.99999962 -0.14760788 Axis 0.19404752 -0.93423188 0.29925969 Axis point 182.29409834 0.00000000 204.86343246 Rotation angle (degrees) 0.05046582 Shift along axis 0.00777771 > ~select #3 Nothing selected > select /C 1234 atoms, 1379 bonds, 61 pseudobonds, 58 residues, 3 models selected > ui mousemode right "map eraser" > select #3 12346 atoms, 12712 bonds, 69 pseudobonds, 1447 residues, 3 models selected > select #4 1 model selected > hide #!1 models > hide #!3 models > volume erase #2 center 142.21,102.18,123.94 radius 40.566 outside true Opened emd_6905(5zal).map copy as #5, grid size 180,180,180, pixel 1.37, shown at step 1, values float32 > volume erase #5 center 140.76,161.3,134 radius 40.566 > volume erase #5 center 148.32,152.15,175.38 radius 40.566 > volume erase #5 center 147.14,168.7,111.92 radius 40.566 > volume erase #5 center 158.28,55.901,118.28 radius 40.566 > volume erase #5 center 187.98,154.17,107.44 radius 40.566 > volume #5 step 2 > volume #5 level 0.008213 > show #!1 models > volume #5 level 0.002749 > hide #!5 models > show #!5 models > hide #!1 models > show #4 models > volume erase #5 center 98.998,163.79,109.34 radius 40.442 > volume erase #5 center 96.449,159.11,109.45 radius 40.442 > volume erase #5 center 156.45,137.17,142.8 radius 16.276 > volume erase #5 center 124.91,123.84,135.62 radius 3.9456 > volume erase #5 center 131.54,135,100.8 radius 3.9456 > volume erase #5 center 151.91,87.244,165.48 radius 3.9456 > volume erase #5 center 150.05,81.79,161.32 radius 3.9456 > volume erase #5 center 163.07,115.54,156.42 radius 3.9456 > volume erase #5 center 162.01,116.64,156.31 radius 3.9456 > save D:/Lab_Roh/Dicer/maps/20220915_J1383_mask_making.cxs No map chosen to save > save D:/Lab_Roh/Dicer/maps/20220915_J1383_mask_RNA.mrc models #5 > close session > open D:/Lab_Roh/Dicer/maps/20220915_J1383_mask_RNA.mrc Opened 20220915_J1383_mask_RNA.mrc as #1, grid size 180,180,180, pixel 1.37, shown at level 1.74e-06, step 1, values float32 > close session > open D:\Lab_Roh\Dicer\maps\20220915_J1383_mask_making.cxs format session Opened cryosparc_P1_J1383_004_volume_map.mrc as #1, grid size 256,256,256, pixel 1.08, shown at level 0.0759, step 1, values float32 Opened emd_6905(5zal).map as #2, grid size 180,180,180, pixel 1.37, shown at level 0.0347, step 1, values float32 Opened emd_6905(5zal).map copy as #5, grid size 180,180,180, pixel 1.37, shown at level 0.00275, step 2, values float32 opened ChimeraX session > show #!1 models > close session > open D:\Lab_Roh\Dicer\maps\20220914_Dicer_maps.cxs format session Opened cryosparc_P63_J215_005_volume_map_sharp.mrc as #1, grid size 300,300,300, pixel 1.1, shown at level 0.12, step 1, values float32 Opened cryosparc_P1_J805_007_volume_map.mrc as #3, grid size 300,300,300, pixel 1.1, shown at step 1, values float32 Opened cryosparc_P1_J770_004_volume_map_sharp.mrc as #4, grid size 280,280,280, pixel 0.849, shown at level 0.158, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 0 as #6.1, grid size 300,300,300, pixel 1.1, shown at level 0.103, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 1 as #6.2, grid size 300,300,300, pixel 1.1, shown at level 0.0887, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 2 as #6.3, grid size 300,300,300, pixel 1.1, shown at level 0.0823, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 3 as #6.4, grid size 300,300,300, pixel 1.1, shown at level 0.0815, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 4 as #6.5, grid size 300,300,300, pixel 1.1, shown at level 0.103, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 5 as #6.6, grid size 300,300,300, pixel 1.1, shown at level 0.0967, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 6 as #6.7, grid size 300,300,300, pixel 1.1, shown at level 0.127, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 7 as #6.8, grid size 300,300,300, pixel 1.1, shown at level 0.103, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 8 as #6.9, grid size 300,300,300, pixel 1.1, shown at level 0.145, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 9 as #6.10, grid size 300,300,300, pixel 1.1, shown at level 0.0841, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 10 as #6.11, grid size 300,300,300, pixel 1.1, shown at level 0.144, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 11 as #6.12, grid size 300,300,300, pixel 1.1, shown at level 0.132, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 12 as #6.13, grid size 300,300,300, pixel 1.1, shown at level 0.109, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 13 as #6.14, grid size 300,300,300, pixel 1.1, shown at level 0.19, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc 14 as #6.15, grid size 300,300,300, pixel 1.1, shown at level 0.0799, step 1, values float32 Opened cryosparc_P63_J215_005_volume_map_sharp.mrc as #7, grid size 300,300,300, pixel 1.1, shown at level 0.0923, step 1, values float32 Opened cryosparc_P1_J1251_003_volume_map_sharp.mrc as #8, grid size 256,256,256, pixel 1.08, shown at level 0.101, step 1, values float32 Opened cryosparc_P1_J1251_003_volume_map_sharp.mrc z flip as #9, grid size 256,256,256, pixel 1.08, shown at level 0.112, step 1, values float32 Opened cryosparc_P1_J1261_002_volume_map.mrc as #10, grid size 256,256,256, pixel 1.08, shown at level 0.0102, step 1, values float32 Opened cryosparc_P1_J1261_002_volume_map_sharp.mrc as #11, grid size 256,256,256, pixel 1.08, shown at level 0.0546, step 1, values float32 Opened cryosparc_P1_J1265_002_volume_map.mrc as #12, grid size 256,256,256, pixel 1.08, shown at level 0.0884, step 1, values float32 Opened cryosparc_P1_J805_007_volume_map_sharp.mrc as #15, grid size 300,300,300, pixel 1.1, shown at level 0.107, step 1, values float32 Opened cryosparc_P1_J1370_004_volume_map.mrc as #20, grid size 256,256,256, pixel 1.08, shown at level 0.0914, step 1, values float32 Opened cryosparc_P1_J1383_004_volume_map.mrc as #23, grid size 256,256,256, pixel 1.08, shown at level 0.0664, step 1, values float32 Opened cryosparc_P1_J1390_004_volume_map.mrc as #24, grid size 256,256,256, pixel 1.08, shown at level 0.0553, step 1, values float32 Opened cryosparc_P1_J1370_004_volume_map.mrc z flip as #14, grid size 256,256,256, pixel 1.08, shown at level 0.0369, step 1, values float32 Opened cryosparc_P1_J1388_006_volume_map.mrc as #16, grid size 256,256,256, pixel 1.08, shown at level 0.0636, step 1, values float32 Opened emd_6905(5zal).map as #17, grid size 180,180,180, pixel 1.37, shown at level 0.0277, step 1, values float32 opened ChimeraX session > close session > open D:/Lab_Roh/Dicer/maps/cryosparc_P1_J1370_004_volume_map.mrc Opened cryosparc_P1_J1370_004_volume_map.mrc as #1, grid size 256,256,256, pixel 1.08, shown at level 0.0576, step 1, values float32 > open > D:/Lab_Roh/Dicer/maps/D_9100067514/20220502let7aGCm_IBS_J770_real_space_refined.cif Summary of feedback from opening D:/Lab_Roh/Dicer/maps/D_9100067514/20220502let7aGCm_IBS_J770_real_space_refined.cif --- warnings | Skipping chem_comp category: Missing column 'type' near line 424 Missing entity information. Treating each chain as a separate entity. Missing first residue in struct_conn "C00001" Missing first residue in struct_conn "C00002" Missing first residue in struct_conn "C00003" Missing first residue in struct_conn "C00004" Missing first residue in struct_conn "C00005" 204 messages similar to the above omitted Bad residue range for struct_conf "1" near line 96 Bad residue range for struct_conf "2" near line 97 Bad residue range for struct_conf "3" near line 98 Bad residue range for struct_conf "4" near line 99 Bad residue range for struct_conf "5" near line 100 22 messages similar to the above omitted Invalid sheet range for struct_sheet_range "A 1" near line 391 Invalid sheet range for struct_sheet_range "A 2" near line 392 Invalid sheet range for struct_sheet_range "B 1" near line 393 Invalid sheet range for struct_sheet_range "B 2" near line 394 Invalid sheet range for struct_sheet_range "C 1" near line 395 6 messages similar to the above omitted Missing or incomplete entity_poly_seq table. Inferred polymer connectivity. Skipping chem_comp category: Missing column 'type' near line 7574 Skipping chem_comp category: Missing column 'type' near line 7826 Skipping chem_comp category: Missing column 'type' near line 8111 Skipping chem_comp category: Missing column 'type' near line 8390 Skipping chem_comp category: Missing column 'type' near line 8651 Chain information for 20220502let7aGCm_IBS_J770_real_space_refined.cif #2 --- Chain | Description A | No description available C | No description available > open D:/Lab_Roh/Dicer/maps/D_9100067514/cryosparc_P1_J770_004_volume_map.mrc Opened cryosparc_P1_J770_004_volume_map.mrc as #3, grid size 280,280,280, pixel 0.849, shown at level 0.047, step 2, values float32 > open D:/Lab_Roh/Dicer/maps/D_9100068025/cryosparc_P1_J805_007_volume_map.mrc Opened cryosparc_P1_J805_007_volume_map.mrc as #4, grid size 300,300,300, pixel 1.1, shown at level 0.0362, step 2, values float32 > hide #!2 models > hide #!3 models > ui mousemode right "translate selected models" > select #4 2 models selected > view matrix models #4,1,0,0,41.877,0,1,0,48.126,0,0,1,-14.228 > ui mousemode right "rotate selected models" > view matrix models > #4,0.11087,-0.9935,-0.025606,342.11,-0.98318,-0.11341,0.14313,356.08,-0.14511,0.0093061,-0.98937,313.16 > view matrix models > #4,-0.91746,0.38809,-0.087466,306.78,0.39468,0.91553,-0.07773,8.9952,0.049912,-0.10584,-0.99313,299.75 > view matrix models > #4,-0.90802,0.2648,0.32463,260.89,0.38959,0.81863,0.42197,-52.027,-0.15402,0.50963,-0.8465,216.07 > view matrix models > #4,-0.30854,0.76404,0.56661,50.101,0.92784,0.37296,0.0023402,-6.659,-0.20953,0.52645,-0.82398,219.04 > view matrix models > #4,-0.78876,0.55049,-0.27353,289.59,0.33477,0.011488,-0.94223,289.81,-0.51555,-0.83476,-0.19335,380.33 > view matrix models > #4,-0.37001,0.86621,0.33582,79.839,0.84014,0.46628,-0.27704,36.146,-0.39656,0.17963,-0.90026,314.18 > view matrix models > #4,-0.73794,-0.30641,0.60129,278.32,-0.17579,0.9475,0.26709,43.68,-0.65156,0.0914,-0.75307,346.45 > view matrix models > #4,-0.91932,-0.30684,0.24636,362.27,-0.35254,0.92036,-0.16926,143.46,-0.1748,-0.24246,-0.95428,351.15 > view matrix models > #4,-0.73816,-0.62014,0.26559,377.92,-0.65695,0.7503,-0.073952,204.23,-0.15341,-0.22907,-0.96125,346.7 > view matrix models > #4,-0.75204,-0.6466,0.12783,405.36,-0.65621,0.71632,-0.23722,234.37,0.061823,-0.26228,-0.96301,317.16 > ui mousemode right "translate selected models" > view matrix models > #4,-0.75204,-0.6466,0.12783,371.91,-0.65621,0.71632,-0.23722,163.31,0.061823,-0.26228,-0.96301,338.8 > view matrix models > #4,-0.75204,-0.6466,0.12783,352.64,-0.65621,0.71632,-0.23722,157.84,0.061823,-0.26228,-0.96301,316.17 > view matrix models > #4,-0.75204,-0.6466,0.12783,350.98,-0.65621,0.71632,-0.23722,165.23,0.061823,-0.26228,-0.96301,315.88 > view matrix models > #4,-0.75204,-0.6466,0.12783,351.67,-0.65621,0.71632,-0.23722,160.44,0.061823,-0.26228,-0.96301,320.16 > hide #!4 models > show #!3 models > view matrix models > #4,-0.75204,-0.6466,0.12783,365.79,-0.65621,0.71632,-0.23722,259.54,0.061823,-0.26228,-0.96301,325 > show #!4 models > view matrix models > #4,-0.75204,-0.6466,0.12783,352,-0.65621,0.71632,-0.23722,160.76,0.061823,-0.26228,-0.96301,318.37 > ~select #4 Nothing selected > hide #!4 models > select #3 2 models selected > view matrix models #3,1,0,0,11.498,0,1,0,86.239,0,0,1,9.2543 > ui mousemode right "rotate selected models" > view matrix models > #3,0.21334,0.13549,0.96754,-27.742,-0.80009,-0.54411,0.25261,331.76,0.56067,-0.828,-0.0076709,161.35 > view matrix models > #3,0.5009,-0.35794,-0.78802,204.83,0.46362,-0.65787,0.59351,158.47,-0.73086,-0.66264,-0.16358,309.88 > view matrix models > #3,0.35682,-0.73248,-0.57979,241.22,-0.73881,-0.60109,0.30471,325.24,-0.5717,0.31963,-0.75564,245.23 > view matrix models > #3,0.92269,-0.24639,0.29653,14.551,-0.14749,-0.93621,-0.319,370.09,0.35621,0.2506,-0.90017,162.95 > view matrix models > #3,-0.93073,-0.36568,-0.0053412,279.13,-0.36549,0.92955,0.048564,131.19,-0.012794,0.047152,-0.99881,241.44 > ui mousemode right "translate selected models" > view matrix models > #3,-0.93073,-0.36568,-0.0053412,274.24,-0.36549,0.92955,0.048564,66.152,-0.012794,0.047152,-0.99881,264.73 > view matrix models > #3,-0.93073,-0.36568,-0.0053412,283.36,-0.36549,0.92955,0.048564,67.273,-0.012794,0.047152,-0.99881,265.19 > ui tool show "Fit in Map" Fit map cryosparc_P1_J770_004_volume_map.mrc in map cryosparc_P1_J1370_004_volume_map.mrc using 27425 points correlation = 0.8901, correlation about mean = 0.5536, overlap = 440.2 steps = 104, shift = 9.32, angle = 11.6 degrees Position of cryosparc_P1_J770_004_volume_map.mrc (#3) relative to cryosparc_P1_J1370_004_volume_map.mrc (#1) coordinates: Matrix rotation and translation -0.96995001 -0.21363702 0.11643121 262.74724804 -0.21422188 0.97675535 0.00761470 45.95040252 -0.11535159 -0.01755623 -0.99316957 287.86924295 Axis -0.10796198 0.99415186 -0.00250855 Axis point 142.33756004 0.00000000 136.21119244 Rotation angle (degrees) 173.30563071 Shift along axis 16.59282924 > hide #!1 models > show #!1 models > hide #!3 models > show #!3 models > hide #!3 models > show #!3 models > hide #!3 models > hide #!1 models > show #!3 models > ui mousemode right "map eraser" > ~select #3 Nothing selected > select #5 1 model selected > volume erase #3 center 145.52,157.51,177.23 radius 21.026 Opened cryosparc_P1_J770_004_volume_map.mrc copy as #6, grid size 280,280,280, pixel 0.849, shown at step 1, values float32 > hide #5 models > show #5 models > volume erase #6 center 145.6,157.08,154.08 radius 20.919 > volume erase #6 center 142.41,159.69,126.73 radius 20.919 > volume erase #6 center 142.03,152.51,99.669 radius 20.919 > volume erase #6 center 117.11,157.78,107.45 radius 20.919 > volume erase #6 center 178.89,147.12,111.38 radius 20.919 > volume erase #6 center 131.08,98.246,124.95 radius 20.919 > volume erase #6 center 101.12,112.16,123.03 radius 20.919 > volume erase #6 center 105.37,123.05,123.6 radius 20.919 > volume erase #6 center 106.39,135.8,129.56 radius 20.919 > volume erase #6 center 112.31,147.94,127.99 radius 20.919 > volume erase #6 center 120.8,142.82,131.84 radius 20.919 > volume erase #6 center 112.11,145.38,152.61 radius 20.919 > volume erase #6 center 109.5,163.65,159.3 radius 20.919 > volume erase #6 center 117.7,163.92,157.85 radius 20.919 > volume erase #6 center 113.43,164.15,180.47 radius 20.919 > volume erase #6 center 120.21,176.62,183.58 radius 20.919 > volume erase #6 center 172.3,156.09,176.99 radius 20.919 > volume erase #6 center 170.16,146.37,162.77 radius 20.919 > volume erase #6 center 173.27,150.15,142.56 radius 20.919 > volume erase #6 center 176.07,144.38,122.64 radius 20.919 > volume erase #6 center 172.12,146.5,114.11 radius 20.919 > volume erase #6 center 114,120.8,114.25 radius 20.919 > volume erase #6 center 121.42,127.6,106.92 radius 20.919 > volume erase #6 center 141.1,125.61,85.772 radius 20.919 > volume erase #6 center 155.57,121.88,90.605 radius 20.919 > volume erase #6 center 166.94,118.73,97.03 radius 20.919 > volume erase #6 center 143.53,99.892,100.42 radius 20.919 > volume erase #6 center 142.63,143.64,86.275 radius 20.919 > volume erase #6 center 162.86,138.95,88.396 radius 20.919 > volume erase #6 center 186.31,126.97,119.1 radius 20.919 > volume erase #6 center 111.4,118.62,130.59 radius 20.919 > volume erase #6 center 101.5,124.98,163.15 radius 20.919 > volume erase #6 center 95.838,130.52,173.49 radius 20.919 > volume erase #6 center 130.22,171.57,208.36 radius 20.919 > volume erase #6 center 125.35,159.14,206.53 radius 20.919 > volume erase #6 center 134.99,156.43,208.73 radius 20.919 > volume erase #6 center 125.22,144.96,229.08 radius 20.919 > volume erase #6 center 125.06,144.02,225.56 radius 20.919 > volume erase #6 center 115.37,161.53,197.75 radius 20.919 > volume erase #6 center 148.97,157.74,213.04 radius 20.919 > volume erase #6 center 151.12,153.76,200.71 radius 20.919 > volume erase #6 center 156.84,153.14,186.74 radius 20.919 > volume erase #6 center 152.6,134.2,96.628 radius 20.919 > volume erase #6 center 113.89,154.67,174.83 radius 20.919 > volume erase #6 center 114.25,152.85,178.41 radius 20.919 > volume erase #6 center 115.48,152.14,173.26 radius 20.919 > volume erase #6 center 106.64,125.68,151.18 radius 20.919 > volume erase #6 center 105.53,124.52,164.37 radius 20.919 > volume erase #6 center 100.08,123.28,179.19 radius 20.919 > volume erase #6 center 101.92,119.2,203.46 radius 20.919 > volume erase #6 center 121,134.55,98.465 radius 20.919 > volume erase #6 center 130.46,134.31,97.281 radius 20.919 > volume erase #6 center 138.34,114.7,105.17 radius 10.697 > volume #6 step 2 > volume #6 step 4 > volume #6 level 0.01249 > volume erase #6 center 134.86,173.8,108.73 radius 10.697 > volume erase #6 center 165.76,168.76,132.96 radius 10.697 > show #!1 models > hide #!1 models > show #!1 models > save D:/Lab_Roh/Dicer/maps/20220915_J1370_mask_RNA.mrc models #6 > hide #!6 models > show #!2 models > hide #!2 models > show #!3 models > hide #!3 models > show #!4 models > hide #!1 models > volume erase #4 center 127.78,135.51,158.43 radius 59.343 Opened cryosparc_P1_J805_007_volume_map.mrc copy as #7, grid size 300,300,300, pixel 1.1, shown at step 1, values float32 > volume #4 step 4 > volume #6 step 2 > show #!6 models > volume #6 step 4 > hide #!6 models > volume #7 step 2 > volume #7 step 4 > volume erase #7 center 200.43,159.63,66.36 radius 25.787 > volume erase #7 center 198.95,159.12,67.956 radius 25.787 > show #!1 models > volume #7 level 0.018 > volume #7 level 0.01145 > hide #!1 models > volume erase #7 center 184.6,108.23,211.36 radius 25.79 > volume erase #7 center 163.44,143.41,196.29 radius 25.79 > volume erase #7 center 150.85,132.74,210.76 radius 25.79 > volume erase #7 center 182.19,151.37,153.79 radius 25.79 > volume erase #7 center 184.51,176.09,141.53 radius 25.79 > volume erase #7 center 203.33,159.87,137.02 radius 25.79 > volume erase #7 center 127.12,191.59,119.85 radius 25.79 > volume erase #7 center 120,182.01,119.48 radius 25.79 > volume erase #7 center 116.3,187.02,92.966 radius 25.79 > volume erase #7 center 111.39,194.08,133.36 radius 25.79 > volume erase #7 center 149.79,191.65,77.503 radius 25.79 > volume erase #7 center 105.37,81.926,137.99 radius 25.79 > volume erase #7 center 98.085,84.663,128.7 radius 25.79 > volume erase #7 center 102.71,83.594,132.38 radius 25.79 > volume erase #7 center 154.17,194.4,98.788 radius 25.79 > volume erase #7 center 145.82,175.17,130.4 radius 25.79 > volume erase #7 center 169.02,90.874,164.3 radius 25.79 > volume erase #7 center 116.99,78.944,143.05 radius 25.79 > volume erase #7 center 159.77,179.82,128.93 radius 25.79 > volume erase #7 center 183.57,167.93,137 radius 25.79 > volume erase #7 center 184.3,167.04,133.43 radius 25.79 > save D:/Lab_Roh/Dicer/maps/20220915_J1370_mask_Helicase.mrc models #7 > save D:/Lab_Roh/Dicer/maps/20220915_J1370_mask_making.cxs > hide #!7 models > show #!1 models > show #!2 models > show #!3 models > hide #!3 models > show #!4 models > show #!6 models > hide #5 models > hide #!4 models > hide #!2 models > hide #!1 models > show #!1 models > show #!3 models > hide #!3 models > vop subtract #1 #6 minrms True Opened volume difference as #8, grid size 256,256,256, pixel 1.08, shown at step 1, values float32 Minimum RMS scale factor for "20220915_J1370_mask_RNA.mrc #6" above level 0.01249 is 1.3834 > show #!1 models > vop subtract #1 #8 minrms True Opened volume difference as #9, grid size 256,256,256, pixel 1.08, shown at step 1, values float32 Minimum RMS scale factor for "volume difference #8" above level 0.05758 is 1.058 > show #!6 models > hide #!6 models > show #!6 models > hide #!6 models > volume #9 level 0.01118 > volume #9 level 0.02305 > show #5 models > volume erase #9 center 138.17,189.71,166.29 radius 25.574 > volume erase #9 center 108.83,179.57,132.31 radius 25.574 > save D:/Lab_Roh/Dicer/maps/20220919_J1370_mask_making.cxs No map chosen to save > save D:/Lab_Roh/Dicer/maps/20220919_J1370_mask_RNA.mrc models #9 > volume #1 level 0.02989 > hide #5 models > vop subtract #1 #3 minrms True Opened volume difference as #10, grid size 256,256,256, pixel 1.08, shown at step 1, values float32 Minimum RMS scale factor for "cryosparc_P1_J770_004_volume_map.mrc #3" above level 0.047007 is 1.1816 > hide #!10 models > show #!10 models > show #!3 models > hide #!3 models > show #!3 models > hide #!10 models > show #!10 models > hide #!3 models > show #!8 models > hide #!8 models > show #5 models > hide #5 models > close #10 > show #!1 models > show #!3 models > volume #3 level 0.01181 > volume #3 level 0.01696 > vop subtract #1 #3 minrms True Opened volume difference as #10, grid size 256,256,256, pixel 1.08, shown at step 1, values float32 Minimum RMS scale factor for "cryosparc_P1_J770_004_volume_map.mrc #3" above level 0.016963 is 1.2054 > show #!8 models > hide #!8 models > show #5 models > volume erase #10 center 135.58,134.65,165.73 radius 64.696 > volume erase #10 center 161.06,79.331,143.87 radius 64.696 > volume erase #10 center 194.11,163.13,178.72 radius 64.696 > volume erase #10 center 175.91,142.39,129.74 radius 20.183 > volume erase #10 center 120.02,162.27,122.25 radius 20.183 > volume erase #10 center 108.98,146.77,124.06 radius 20.183 > volume #4 level 0.03261 > volume #10 level 0.01924 > volume erase #10 center 121.79,121.38,228.6 radius 20.183 > volume erase #10 center 116.73,101.95,227.59 radius 20.183 > volume erase #10 center 76.613,102.03,147.65 radius 20.183 > volume erase #10 center 144.35,87.356,74.779 radius 20.183 > volume erase #10 center 167.45,97.281,77.585 radius 20.183 > volume erase #10 center 178.45,108.73,80.882 radius 20.183 > volume erase #10 center 194.99,116.47,103.26 radius 20.183 > volume erase #10 center 209.55,131.36,114.93 radius 20.183 > volume erase #10 center 197.05,148.1,120.88 radius 20.183 > volume erase #10 center 197.11,147.12,117.73 radius 20.183 > volume erase #10 center 210.34,122.97,71.524 radius 20.183 > volume erase #10 center 166.61,216.72,132.48 radius 20.183 > volume erase #10 center 164.12,227.67,98.326 radius 20.183 > volume erase #10 center 135.32,226.85,96.618 radius 20.183 > volume erase #10 center 197.97,170.34,116.62 radius 20.183 > volume erase #10 center 121.02,193.26,134.3 radius 20.183 > volume erase #10 center 122.05,197.88,119.55 radius 20.183 > volume erase #10 center 118.21,208.05,106.25 radius 20.183 > volume erase #10 center 146.05,211.32,68.465 radius 20.183 > volume erase #10 center 153.39,202.12,65.533 radius 20.183 > volume erase #10 center 126.99,90.413,94.915 radius 20.183 > volume erase #10 center 137.63,86.955,88.523 radius 20.183 > volume erase #10 center 137.52,90.248,85.314 radius 15.898 > volume erase #10 center 103.73,90.915,76.452 radius 15.898 > volume erase #10 center 101.91,97.923,80.915 radius 15.898 > volume erase #10 center 172.25,115.45,69.818 radius 15.898 > volume erase #10 center 167.46,121.84,72.277 radius 6.6355 > volume erase #10 center 165.38,128.63,65.349 radius 6.6355 > volume erase #10 center 168.09,129.72,64.606 radius 6.6355 > volume erase #10 center 167.17,132.22,63.208 radius 6.6355 > volume erase #10 center 156.34,177.84,122.85 radius 6.6355 > volume erase #10 center 154.87,188.96,121.59 radius 6.6355 > volume erase #10 center 153.64,207.17,123.24 radius 6.6355 > volume erase #10 center 156.66,207.56,118.21 radius 6.6355 > volume erase #10 center 161,207.74,104.08 radius 6.6355 > volume erase #10 center 155.41,208.67,105.27 radius 6.6355 > volume erase #10 center 183.98,176.21,87.798 radius 6.6355 > volume erase #10 center 149.59,174.98,125.12 radius 6.6355 > volume erase #10 center 152.2,183.7,120.66 radius 6.6355 > volume erase #10 center 140.91,190.26,122.23 radius 6.6355 > volume erase #10 center 123.28,170.14,101.82 radius 6.6355 > volume erase #10 center 130.62,161.18,105.45 radius 6.6355 > volume erase #10 center 127.02,179.19,99.696 radius 6.6355 > volume erase #10 center 165.44,178.86,118.95 radius 6.6355 > volume erase #10 center 166.02,184.54,116.96 radius 6.6355 > volume erase #10 center 140.63,185.19,119.43 radius 6.6355 > volume erase #10 center 111.55,150,106.41 radius 6.6355 > volume erase #10 center 129.69,188.05,112.27 radius 6.6355 > volume erase #10 center 150.1,180.91,121.04 radius 6.6355 > volume erase #10 center 167.48,170.2,121.96 radius 6.6355 > volume erase #10 center 185.22,177.71,92.633 radius 6.6355 > volume erase #10 center 170,179.34,70.511 radius 6.6355 > volume erase #10 center 176.8,160.19,120.04 radius 6.6355 > volume erase #10 center 134.99,193.49,76.338 radius 6.6355 > volume erase #10 center 161.58,119.52,70.314 radius 6.6355 > hide #5 models > save D:/Lab_Roh/Dicer/maps/20220919_J1370_mask_Helicase.mrc models #10 > save D:/Lab_Roh/Dicer/maps/20220919_J1370_mask_making.cxs > close session > open D:\Lab_Roh\Dicer\maps\20220915_J1383_mask_making.cxs format session Opened cryosparc_P1_J1383_004_volume_map.mrc as #1, grid size 256,256,256, pixel 1.08, shown at level 0.0759, step 1, values float32 Opened emd_6905(5zal).map as #2, grid size 180,180,180, pixel 1.37, shown at level 0.0347, step 1, values float32 Opened emd_6905(5zal).map copy as #5, grid size 180,180,180, pixel 1.37, shown at level 0.00275, step 2, values float32 opened ChimeraX session > hide #!5 models > show #!1 models > show #!2 models > hide #!2 models > volume #1 level 0.04027 > show #!2 models > vop subtract #1 #2 minrms True Opened volume difference as #4, grid size 256,256,256, pixel 1.08, shown at step 1, values float32 Minimum RMS scale factor for "emd_6905(5zal).map #2" above level 0.03469 is 2.3221 > hide #!4 models > show #!4 models > show #!1 models > vop subtract #1 #4 minrms True Opened volume difference as #6, grid size 256,256,256, pixel 1.08, shown at step 1, values float32 Minimum RMS scale factor for "volume difference #4" above level 0.040272 is 1.5201 > show #!1 models > hide #!1 models > show #!2 models > hide #!2 models > show #!2 models > hide #!6 models > show #!6 models > hide #!6 models > hide #!2 models > show #!2 models > show #!3 models > hide #!2 models > select ::name="A"::name="C"::name="G"::name="U" 1234 atoms, 1379 bonds, 61 pseudobonds, 58 residues, 3 models selected > color (#!3 & sel) red > show #!6 models > ui tool show "Color Zone" > color zone #6 near sel distance 6.48 > color zone #6 near sel distance 7.63 > volume splitbyzone #6 Opened volume difference 0 as #7.1, grid size 256,256,256, pixel 1.08, shown at level 0.0403, step 1, values float32 Opened volume difference 1 as #7.2, grid size 256,256,256, pixel 1.08, shown at level 0.0403, step 1, values float32 > hide #!7 models > hide #!7.1 models > hide #!7.2 models > hide #!3 models > show #!7.2 models > volume #7.2 level 0.005421 > save D:/Lab_Roh/Dicer/maps/20220919_J1383_mask_making.cxs > save D:/Lab_Roh/Dicer/maps/20220919_J1383_mask_RNA.mrc models #7.2 > close session > open D:\Lab_Roh\Dicer\maps\20220915_J1370_mask_making.cxs format session Opened cryosparc_P1_J1370_004_volume_map.mrc as #1, grid size 256,256,256, pixel 1.08, shown at level 0.0576, step 1, values float32 Opened cryosparc_P1_J770_004_volume_map.mrc as #3, grid size 280,280,280, pixel 0.849, shown at level 0.047, step 2, values float32 Opened cryosparc_P1_J805_007_volume_map.mrc as #4, grid size 300,300,300, pixel 1.1, shown at level 0.0362, step 4, values float32 Opened 20220915_J1370_mask_RNA.mrc as #6, grid size 280,280,280, pixel 0.849, shown at level 0.0125, step 4, values float32 Opened 20220915_J1370_mask_Helicase.mrc as #7, grid size 300,300,300, pixel 1.1, shown at level 0.0114, step 4, values float32 opened ChimeraX session > hide #!7 models > show #!6 models > show #!1 models > hide #!1 models > close session > open D:\Lab_Roh\Dicer\maps\20220919_J1370_mask_making.cxs format session Opened cryosparc_P1_J1370_004_volume_map.mrc as #1, grid size 256,256,256, pixel 1.08, shown at level 0.0299, step 1, values float32 Opened cryosparc_P1_J770_004_volume_map.mrc as #3, grid size 280,280,280, pixel 0.849, shown at level 0.017, step 2, values float32 Opened cryosparc_P1_J805_007_volume_map.mrc as #4, grid size 300,300,300, pixel 1.1, shown at level 0.0326, step 4, values float32 Opened 20220915_J1370_mask_RNA.mrc as #6, grid size 280,280,280, pixel 0.849, shown at level 0.0125, step 4, values float32 Opened 20220915_J1370_mask_Helicase.mrc as #7, grid size 300,300,300, pixel 1.1, shown at level 0.0114, step 4, values float32 Opened volume difference as #8, grid size 256,256,256, pixel 1.08, shown at level 0.0576, step 1, values float32 Opened 20220919_J1370_mask_RNA.mrc as #9, grid size 256,256,256, pixel 1.08, shown at level 0.023, step 1, values float32 Opened 20220919_J1370_mask_Helicase.mrc as #10, grid size 256,256,256, pixel 1.08, shown at level 0.0192, step 1, values float32 opened ChimeraX session > hide #!10 models > show #!9 models > close session > open D:/Lab_Roh/Dicer/maps/cryosparc_P1_J1447_class_00_00102_volume.mrc Opened cryosparc_P1_J1447_class_00_00102_volume.mrc as #1, grid size 128,128,128, pixel 2.16, shown at level 0.193, step 1, values float32 > open D:/Lab_Roh/Dicer/maps/cryosparc_P1_J1447_class_01_00102_volume.mrc Opened cryosparc_P1_J1447_class_01_00102_volume.mrc as #2, grid size 128,128,128, pixel 2.16, shown at level 0.183, step 1, values float32 > open D:/Lab_Roh/Dicer/maps/cryosparc_P1_J1447_class_02_00102_volume.mrc Opened cryosparc_P1_J1447_class_02_00102_volume.mrc as #3, grid size 128,128,128, pixel 2.16, shown at level 0.165, step 1, values float32 > open D:/Lab_Roh/Dicer/maps/cryosparc_P1_J1447_class_03_00102_volume.mrc Opened cryosparc_P1_J1447_class_03_00102_volume.mrc as #4, grid size 128,128,128, pixel 2.16, shown at level 0.162, step 1, values float32 > hide #!2 models > hide #!3 models > hide #!4 models > show #!2 models > hide #!1 models > hide #!2 models > show #!3 models > show #!1 models > hide #!1 models > hide #!3 models > show #!4 models > hide #!4 models > show #!3 models > show #!1 models > hide #!3 models > show #!3 models > hide #!1 models > hide #!3 models > show #!1 models > show #!2 models > hide #!2 models > show #!3 models > hide #!3 models > show #!4 models > hide #!4 models > save D:/Lab_Roh/Dicer/maps/20220919_J1447.cxs > close session > ui tool show "Volume Viewer" > open > D:/Lab_Roh/Dicer/maps/20220920/cryosparc_P1_J1461_component_000/cryosparc_P1_J1461_component_000/frame_000.mrc Opened frame_000.mrc as #1, grid size 256,256,256, pixel 1.08, shown at level 0.0809, step 1, values float32 > open > D:/Lab_Roh/Dicer/maps/20220920/cryosparc_P1_J1461_component_000/cryosparc_P1_J1461_component_000/frame_001.mrc Opened frame_001.mrc as #2, grid size 256,256,256, pixel 1.08, shown at level 0.0802, step 1, values float32 > open > D:/Lab_Roh/Dicer/maps/20220920/cryosparc_P1_J1461_component_000/cryosparc_P1_J1461_component_000/frame_002.mrc Opened frame_002.mrc as #3, grid size 256,256,256, pixel 1.08, shown at level 0.0794, step 1, values float32 > open > D:/Lab_Roh/Dicer/maps/20220920/cryosparc_P1_J1461_component_000/cryosparc_P1_J1461_component_000/frame_003.mrc Opened frame_003.mrc as #4, grid size 256,256,256, pixel 1.08, shown at level 0.0784, step 1, values float32 > open > D:/Lab_Roh/Dicer/maps/20220920/cryosparc_P1_J1461_component_000/cryosparc_P1_J1461_component_000/frame_004.mrc Opened frame_004.mrc as #5, grid size 256,256,256, pixel 1.08, shown at level 0.0775, step 1, values float32 > open > D:/Lab_Roh/Dicer/maps/20220920/cryosparc_P1_J1461_component_000/cryosparc_P1_J1461_component_000/frame_005.mrc Opened frame_005.mrc as #6, grid size 256,256,256, pixel 1.08, shown at level 0.0777, step 1, values float32 > open > D:/Lab_Roh/Dicer/maps/20220920/cryosparc_P1_J1461_component_000/cryosparc_P1_J1461_component_000/frame_006.mrc Opened frame_006.mrc as #7, grid size 256,256,256, pixel 1.08, shown at level 0.0782, step 1, values float32 > open > D:/Lab_Roh/Dicer/maps/20220920/cryosparc_P1_J1461_component_000/cryosparc_P1_J1461_component_000/frame_007.mrc Opened frame_007.mrc as #8, grid size 256,256,256, pixel 1.08, shown at level 0.0789, step 1, values float32 > open > D:/Lab_Roh/Dicer/maps/20220920/cryosparc_P1_J1461_component_000/cryosparc_P1_J1461_component_000/frame_008.mrc Opened frame_008.mrc as #9, grid size 256,256,256, pixel 1.08, shown at level 0.0796, step 1, values float32 > open > D:/Lab_Roh/Dicer/maps/20220920/cryosparc_P1_J1461_component_000/cryosparc_P1_J1461_component_000/frame_009.mrc Opened frame_009.mrc as #10, grid size 256,256,256, pixel 1.08, shown at level 0.08, step 1, values float32 > hide #!2 models > show #!2 models > hide #!2 models > hide #!3 models > show #!3 models > show #!2 models > hide #!1-10 target m > show #!1 models > show #!2 models > hide #!1 models > show #!3 models > hide #!2 models > show #!4 models > hide #!3 models > show #!5 models > hide #!4 models > show #!6 models > hide #!5 models > show #!7 models > hide #!6 models > show #!8 models > hide #!7 models > show #!9 models > hide #!8 models > show #!10 models > hide #!9 models > hide #!10 models > show #!2 models > show #!3 models > hide #!2 models > show #!5 models > hide #!3 models > show #!6 models > hide #!5 models > show #!10 models > hide #!6 models > close session > open > D:\Lab_Roh\Dicer\maps\20220920\cryosparc_P1_J1461_component_000\cryosparc_P1_J1461_component_000\frame_009.mrc > format mrc Opened frame_009.mrc as #1, grid size 256,256,256, pixel 1.08, shown at level 0.08, step 1, values float32 > close session > open > D:\Lab_Roh\Dicer\maps\20220920\cryosparc_P1_J1461_component_000\cryosparc_P1_J1461_component_000\frame_009.mrc > format mrc Opened frame_009.mrc as #1, grid size 256,256,256, pixel 1.08, shown at level 0.08, step 1, values float32 > close session > open > D:\Lab_Roh\Dicer\maps\20220920\cryosparc_P1_J1461_component_000\cryosparc_P1_J1461_component_000\frame_000.mrc > format mrc Opened frame_000.mrc as #1, grid size 256,256,256, pixel 1.08, shown at level 0.0809, step 1, values float32 > close session ===== Log before crash end ===== Log: UCSF ChimeraX version: 1.3rc202111060828 (2021-11-06) © 2016-2021 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX OpenGL version: 3.3.0 NVIDIA 451.67 OpenGL renderer: GeForce GTX 1650 with Max-Q Design/PCIe/SSE2 OpenGL vendor: NVIDIA Corporation Manufacturer: SAMSUNG ELECTRONICS CO., LTD. Model: 760XBE OS: Microsoft Windows 10 Pro (Build 19043) Memory: 17,065,771,008 MaxProcessMemory: 137,438,953,344 CPU: 8 Intel(R) Core(TM) i7-8565U CPU @ 1.80GHz OSLanguage: ko-KR Locale: ('ko_KR', 'cp949') PyQt5 5.15.2, Qt 5.15.2 Installed Packages: alabaster: 0.7.12 appdirs: 1.4.4 Babel: 2.9.1 backcall: 0.2.0 blockdiag: 2.0.1 certifi: 2021.10.8 cftime: 1.5.1.1 charset-normalizer: 2.0.7 ChimeraX-AddCharge: 1.1.5 ChimeraX-AddH: 2.1.10 ChimeraX-AlignmentAlgorithms: 2.0 ChimeraX-AlignmentHdrs: 3.2 ChimeraX-AlignmentMatrices: 2.0 ChimeraX-Alignments: 2.2.3 ChimeraX-AlphaFold: 1.0 ChimeraX-AltlocExplorer: 1.0.1 ChimeraX-AmberInfo: 1.0 ChimeraX-Arrays: 1.0 ChimeraX-Atomic: 1.30.2 ChimeraX-AtomicLibrary: 4.1.5 ChimeraX-AtomSearch: 2.0 ChimeraX-AtomSearchLibrary: 1.0 ChimeraX-AxesPlanes: 2.0 ChimeraX-BasicActions: 1.1 ChimeraX-BILD: 1.0 ChimeraX-BlastProtein: 2.0 ChimeraX-BondRot: 2.0 ChimeraX-BugReporter: 1.0 ChimeraX-BuildStructure: 2.6 ChimeraX-Bumps: 1.0 ChimeraX-BundleBuilder: 1.1 ChimeraX-ButtonPanel: 1.0 ChimeraX-CageBuilder: 1.0 ChimeraX-CellPack: 1.0 ChimeraX-Centroids: 1.2 ChimeraX-ChemGroup: 2.0 ChimeraX-Clashes: 2.2.2 ChimeraX-ColorActions: 1.0 ChimeraX-ColorGlobe: 1.0 ChimeraX-ColorKey: 1.5 ChimeraX-CommandLine: 1.1.5 ChimeraX-ConnectStructure: 2.0 ChimeraX-Contacts: 1.0 ChimeraX-Core: 1.3rc202111060828 ChimeraX-CoreFormats: 1.1 ChimeraX-coulombic: 1.3.1 ChimeraX-Crosslinks: 1.0 ChimeraX-Crystal: 1.0 ChimeraX-CrystalContacts: 1.0 ChimeraX-DataFormats: 1.2.2 ChimeraX-Dicom: 1.0 ChimeraX-DistMonitor: 1.1.5 ChimeraX-DistUI: 1.0 ChimeraX-Dssp: 2.0 ChimeraX-EMDB-SFF: 1.0 ChimeraX-ExperimentalCommands: 1.0 ChimeraX-FileHistory: 1.0 ChimeraX-FunctionKey: 1.0 ChimeraX-Geometry: 1.1 ChimeraX-gltf: 1.0 ChimeraX-Graphics: 1.1 ChimeraX-Hbonds: 2.1.2 ChimeraX-Help: 1.2 ChimeraX-HKCage: 1.3 ChimeraX-IHM: 1.1 ChimeraX-ImageFormats: 1.2 ChimeraX-IMOD: 1.0 ChimeraX-IO: 1.0.1 ChimeraX-ItemsInspection: 1.0 ChimeraX-Label: 1.1 ChimeraX-ListInfo: 1.1.1 ChimeraX-Log: 1.1.4 ChimeraX-LookingGlass: 1.1 ChimeraX-Maestro: 1.8.1 ChimeraX-Map: 1.1 ChimeraX-MapData: 2.0 ChimeraX-MapEraser: 1.0 ChimeraX-MapFilter: 2.0 ChimeraX-MapFit: 2.0 ChimeraX-MapSeries: 2.1 ChimeraX-Markers: 1.0 ChimeraX-Mask: 1.0 ChimeraX-MatchMaker: 2.0.2 ChimeraX-MDcrds: 2.6 ChimeraX-MedicalToolbar: 1.0.1 ChimeraX-Meeting: 1.0 ChimeraX-MLP: 1.1 ChimeraX-mmCIF: 2.4 ChimeraX-MMTF: 2.1 ChimeraX-Modeller: 1.2.6 ChimeraX-ModelPanel: 1.2.1 ChimeraX-ModelSeries: 1.0 ChimeraX-Mol2: 2.0 ChimeraX-Morph: 1.0 ChimeraX-MouseModes: 1.1 ChimeraX-Movie: 1.0 ChimeraX-Neuron: 1.0 ChimeraX-Nucleotides: 2.0.2 ChimeraX-OpenCommand: 1.7 ChimeraX-PDB: 2.6.5 ChimeraX-PDBBio: 1.0 ChimeraX-PDBLibrary: 1.0.2 ChimeraX-PDBMatrices: 1.0 ChimeraX-PickBlobs: 1.0 ChimeraX-Positions: 1.0 ChimeraX-PresetMgr: 1.0.1 ChimeraX-PubChem: 2.1 ChimeraX-ReadPbonds: 1.0 ChimeraX-Registration: 1.1 ChimeraX-RemoteControl: 1.0 ChimeraX-ResidueFit: 1.0 ChimeraX-RestServer: 1.1 ChimeraX-RNALayout: 1.0 ChimeraX-RotamerLibMgr: 2.0 ChimeraX-RotamerLibsDunbrack: 2.0 ChimeraX-RotamerLibsDynameomics: 2.0 ChimeraX-RotamerLibsRichardson: 2.0 ChimeraX-SaveCommand: 1.5 ChimeraX-SchemeMgr: 1.0 ChimeraX-SDF: 2.0 ChimeraX-Segger: 1.0 ChimeraX-Segment: 1.0 ChimeraX-SelInspector: 1.0 ChimeraX-SeqView: 2.4.6 ChimeraX-Shape: 1.0.1 ChimeraX-Shell: 1.0 ChimeraX-Shortcuts: 1.1 ChimeraX-ShowAttr: 1.0 ChimeraX-ShowSequences: 1.0 ChimeraX-SideView: 1.0 ChimeraX-Smiles: 2.1 ChimeraX-SmoothLines: 1.0 ChimeraX-SpaceNavigator: 1.0 ChimeraX-StdCommands: 1.6 ChimeraX-STL: 1.0 ChimeraX-Storm: 1.0 ChimeraX-Struts: 1.0 ChimeraX-Surface: 1.0 ChimeraX-SwapAA: 2.0 ChimeraX-SwapRes: 2.1 ChimeraX-TapeMeasure: 1.0 ChimeraX-Test: 1.0 ChimeraX-Toolbar: 1.1 ChimeraX-ToolshedUtils: 1.2 ChimeraX-Tug: 1.0 ChimeraX-UI: 1.13.7 ChimeraX-uniprot: 2.2 ChimeraX-UnitCell: 1.0 ChimeraX-ViewDockX: 1.0.1 ChimeraX-VIPERdb: 1.0 ChimeraX-Vive: 1.1 ChimeraX-VolumeMenu: 1.0 ChimeraX-VTK: 1.0 ChimeraX-WavefrontOBJ: 1.0 ChimeraX-WebCam: 1.0 ChimeraX-WebServices: 1.0 ChimeraX-Zone: 1.0 colorama: 0.4.4 comtypes: 1.1.10 cxservices: 1.1 cycler: 0.11.0 Cython: 0.29.24 decorator: 5.1.0 docutils: 0.17.1 filelock: 3.0.12 funcparserlib: 0.3.6 grako: 3.16.5 h5py: 3.5.0 html2text: 2020.1.16 idna: 3.3 ihm: 0.21 imagecodecs: 2021.4.28 imagesize: 1.2.0 ipykernel: 5.5.5 ipython: 7.23.1 ipython-genutils: 0.2.0 jedi: 0.18.0 Jinja2: 3.0.1 jupyter-client: 6.1.12 jupyter-core: 4.9.1 kiwisolver: 1.3.2 lxml: 4.6.3 lz4: 3.1.3 MarkupSafe: 2.0.1 matplotlib: 3.4.3 matplotlib-inline: 0.1.3 msgpack: 1.0.2 netCDF4: 1.5.7 networkx: 2.6.3 numexpr: 2.7.3 numpy: 1.21.2 openvr: 1.16.801 packaging: 21.2 ParmEd: 3.2.0 parso: 0.8.2 pickleshare: 0.7.5 Pillow: 8.3.2 pip: 21.2.4 pkginfo: 1.7.1 prompt-toolkit: 3.0.22 psutil: 5.8.0 pycollada: 0.7.1 pydicom: 2.1.2 Pygments: 2.10.0 PyOpenGL: 3.1.5 PyOpenGL-accelerate: 3.1.5 pyparsing: 2.4.7 PyQt5-commercial: 5.15.2 PyQt5-sip: 12.8.1 PyQtWebEngine-commercial: 5.15.2 python-dateutil: 2.8.2 pytz: 2021.3 pywin32: 228 pyzmq: 22.3.0 qtconsole: 5.1.1 QtPy: 1.11.2 RandomWords: 0.3.0 requests: 2.26.0 scipy: 1.7.1 setuptools: 57.5.0 sfftk-rw: 0.7.1 six: 1.16.0 snowballstemmer: 2.1.0 sortedcontainers: 2.4.0 Sphinx: 4.2.0 sphinx-autodoc-typehints: 1.12.0 sphinxcontrib-applehelp: 1.0.2 sphinxcontrib-blockdiag: 2.0.0 sphinxcontrib-devhelp: 1.0.2 sphinxcontrib-htmlhelp: 2.0.0 sphinxcontrib-jsmath: 1.0.1 sphinxcontrib-qthelp: 1.0.3 sphinxcontrib-serializinghtml: 1.1.5 suds-jurko: 0.6 tables: 3.6.1 tifffile: 2021.4.8 tinyarray: 1.2.3 tornado: 6.1 traitlets: 5.1.1 urllib3: 1.26.7 wcwidth: 0.2.5 webcolors: 1.11.1 wheel: 0.37.0 wheel-filename: 1.3.0 WMI: 1.5.1
Change History (2)
comment:1 by , 3 years ago
Cc: | added |
---|---|
Component: | Unassigned → Platform |
Description: | modified (diff) |
Owner: | set to |
Platform: | → all |
Project: | → ChimeraX |
Status: | new → accepted |
Summary: | ChimeraX bug report submission → Crash using File→Open on Windows and/or in return statement |
comment:2 by , 3 years ago
Resolution: | → can't reproduce |
---|---|
Status: | accepted → closed |
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