Opened 3 years ago

Closed 3 years ago

#7619 closed defect (can't reproduce)

Crash in color button callback

Reported by: chimerax-bug-report@… Owned by: pett
Priority: normal Milestone:
Component: UI Version:
Keywords: Cc:
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description 

The following bug report has been submitted:
Platform:        macOS-10.16-x86_64-i386-64bit
ChimeraX Version: 1.4 (2022-06-03 23:39:42 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Fatal Python error: Bus error

Current thread 0x0000000201157600 (most recent call first):
  File "/Applications/ChimeraX-1.4.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/ui/widgets/color_button.py", line 147 in 
  File "/Applications/ChimeraX-1.4.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/ui/gui.py", line 318 in event_loop
  File "/Applications/ChimeraX-1.4.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/ChimeraX_main.py", line 870 in init
  File "/Applications/ChimeraX-1.4.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/ChimeraX_main.py", line 1021 in 
  File "/Applications/ChimeraX-1.4.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 87 in _run_code
  File "/Applications/ChimeraX-1.4.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 197 in _run_module_as_main


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{
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  "procLaunch" : "2022-09-18 15:48:35.0497 +0900",
  "procRole" : "Foreground",
  "version" : 2,
  "userID" : 501,
  "deployVersion" : 210,
  "modelCode" : "MacBookPro18,2",
  "procStartAbsTime" : 2608538233462,
  "coalitionID" : 7420,
  "osVersion" : {
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    "releaseType" : "User"
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  "captureTime" : "2022-09-18 20:14:18.8255 +0900",
  "incident" : "12E6CE4A-5D0E-4637-BB4B-60735C2FDCD2",
  "bug_type" : "309",
  "pid" : 8409,
  "procExitAbsTime" : 2991192336515,
  "translated" : true,
  "cpuType" : "X86-64",
  "procName" : "ChimeraX",
  "procPath" : "\/Applications\/ChimeraX-1.4.app\/Contents\/MacOS\/ChimeraX",
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  "coalitionName" : "edu.ucsf.cgl.ChimeraX",
  "crashReporterKey" : "C4BB8746-53D8-26A2-D8AC-068CC50BF383",
  "wakeTime" : 17793,
  "sleepWakeUUID" : "45B40E2C-8FF7-4185-A55C-470D05120381",
  "sip" : "enabled",
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  "isCorpse" : 1,
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===== Log before crash start =====
UCSF ChimeraX version: 1.4 (2022-06-03)  
© 2016-2022 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open
> /Users/sjws_rmbp/Downloads/cryosparc_P97_J100_class_01_00181_volume_sharp.mrc

Opened cryosparc_P97_J100_class_01_00181_volume_sharp.mrc as #1, grid size
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> volume #1 level 1.136

> open
> /Users/sjws_rmbp/Dropbox/Mac/Documents/CryoSparc_Map_hGPR156/hGPR156_1-344_AlphaFold_Prediction_exclude_after_H8_dimer_align_7EB2_GABAb_merge_7EB2_Gproteins.pdb

Chain information for
hGPR156_1-344_AlphaFold_Prediction_exclude_after_H8_dimer_align_7EB2_GABAb_merge_7EB2_Gproteins.pdb
#2  
---  
Chain | Description  
A D | No description available  
B | No description available  
C | No description available  
N | No description available  
Y | No description available  
  

> show cartoons

> hide cartoons

> hide atoms

> show cartoons

> volume #1 level 0.994

> ui mousemode right select

Drag select of 1513 residues, 1 pseudobonds  

> ui mousemode right "translate selected models"

> view matrix models #2,1,0,0,123.68,0,1,0,151.32,0,0,1,-10.572

> view matrix models #2,1,0,0,176.17,0,1,0,147.5,0,0,1,135.85

> view matrix models #2,1,0,0,184.13,0,1,0,152.17,0,0,1,137.72

> view matrix models #2,1,0,0,188.03,0,1,0,165.68,0,0,1,139.58

> volume flip #1

Opened cryosparc_P97_J100_class_01_00181_volume_sharp.mrc z flip as #3, grid
size 128,128,128, pixel 2.45, shown at step 1, values float32  

> ui mousemode right "rotate selected models"

> view matrix models
> #2,0.010837,-0.72809,-0.6854,166.68,-0.95424,0.19732,-0.2247,139.57,0.29885,0.65647,-0.69263,169.99

> view matrix models
> #2,0.56797,-0.77467,-0.27804,174.25,-0.75576,-0.3571,-0.54891,142.2,0.32594,0.52189,-0.78828,170.34

> view matrix models
> #2,0.59788,-0.74203,-0.3032,175.47,-0.74992,-0.38419,-0.53853,141.97,0.28312,0.54935,-0.78616,169.63

> view matrix models
> #2,0.99044,-0.0042807,-0.1379,189.23,-0.065707,-0.89352,-0.4442,151.33,-0.12131,0.44901,-0.88525,160.83

> view matrix models
> #2,0.87763,-0.47833,-0.030893,181.23,-0.39315,-0.68148,-0.61726,147.9,0.27421,0.55388,-0.78615,169.48

> ui tool show "Fit in Map"

> fitmap #2 inMap #1

Fit molecule
hGPR156_1-344_AlphaFold_Prediction_exclude_after_H8_dimer_align_7EB2_GABAb_merge_7EB2_Gproteins.pdb
(#2) to map cryosparc_P97_J100_class_01_00181_volume_sharp.mrc (#1) using
12996 atoms  
average map value = 0.8631, steps = 176  
shifted from previous position = 6.28  
rotated from previous position = 36.2 degrees  
atoms outside contour = 8207, contour level = 0.99398  
  
Position of
hGPR156_1-344_AlphaFold_Prediction_exclude_after_H8_dimer_align_7EB2_GABAb_merge_7EB2_Gproteins.pdb
(#2) relative to cryosparc_P97_J100_class_01_00181_volume_sharp.mrc (#1)
coordinates:  
Matrix rotation and translation  
0.90718418 -0.18887442 0.37595653 177.12162196  
0.19767879 -0.59745842 -0.77715283 163.56059525  
0.37140269 0.77933939 -0.50466837 164.11880194  
Axis 0.97051444 0.00283944 0.24102624  
Axis point 0.00000000 52.28750568 102.20865138  
Rotation angle (degrees) 126.68900700  
Shift along axis 211.92045153  
  

> view matrix models
> #2,0.89557,-0.36666,0.252,176.52,-0.12251,-0.74775,-0.65258,153.81,0.42771,0.55356,-0.71458,165.47

> view matrix models
> #2,0.89642,-0.36326,0.25391,176.55,-0.11659,-0.74601,-0.65565,153.99,0.42759,0.55814,-0.71109,165.47

> ui mousemode right "translate selected models"

> view matrix models
> #2,0.89642,-0.36326,0.25391,169.14,-0.11659,-0.74601,-0.65565,152.18,0.42759,0.55814,-0.71109,185.38

> view matrix models
> #2,0.89642,-0.36326,0.25391,174.65,-0.11659,-0.74601,-0.65565,160.26,0.42759,0.55814,-0.71109,181.68

> view matrix models
> #2,0.89642,-0.36326,0.25391,175.2,-0.11659,-0.74601,-0.65565,159.29,0.42759,0.55814,-0.71109,186.2

> view matrix models
> #2,0.89642,-0.36326,0.25391,172.15,-0.11659,-0.74601,-0.65565,156.33,0.42759,0.55814,-0.71109,184.08

> fitmap #2 inMap #1

Fit molecule
hGPR156_1-344_AlphaFold_Prediction_exclude_after_H8_dimer_align_7EB2_GABAb_merge_7EB2_Gproteins.pdb
(#2) to map cryosparc_P97_J100_class_01_00181_volume_sharp.mrc (#1) using
12996 atoms  
average map value = 0.8631, steps = 156  
shifted from previous position = 18.5  
rotated from previous position = 21.4 degrees  
atoms outside contour = 8208, contour level = 0.99398  
  
Position of
hGPR156_1-344_AlphaFold_Prediction_exclude_after_H8_dimer_align_7EB2_GABAb_merge_7EB2_Gproteins.pdb
(#2) relative to cryosparc_P97_J100_class_01_00181_volume_sharp.mrc (#1)
coordinates:  
Matrix rotation and translation  
0.90730859 -0.18901870 0.37558363 177.12585771  
0.19739811 -0.59720898 -0.77741586 163.56094310  
0.37124805 0.77949559 -0.50454090 164.12592882  
Axis 0.97054987 0.00270272 0.24088511  
Axis point 0.00000000 52.27816725 102.24786743  
Rotation angle (degrees) 126.67109911  
Shift along axis 211.88703096  
  

> view matrix models
> #2,0.90731,-0.18902,0.37558,173.09,0.1974,-0.59721,-0.77742,161.61,0.37125,0.7795,-0.50454,177.31

> view matrix models
> #2,0.90731,-0.18902,0.37558,172.78,0.1974,-0.59721,-0.77742,161.79,0.37125,0.7795,-0.50454,176.72

> ui mousemode right "rotate selected models"

> view matrix models
> #2,0.96211,-0.21086,0.17284,175.91,-0.08021,-0.82478,-0.55973,151.28,0.26059,0.52466,-0.81045,175.12

> view matrix models
> #2,0.95843,-0.21722,0.18499,175.65,-0.072072,-0.81166,-0.57966,151.79,0.27607,0.54223,-0.79358,175.45

> ui mousemode right "translate selected models"

> view matrix models
> #2,0.95843,-0.21722,0.18499,179.11,-0.072072,-0.81166,-0.57966,146.19,0.27607,0.54223,-0.79358,181.01

> volume #1 level 0.8841

> close #1

> fitmap #2 inMap #3

Fit molecule
hGPR156_1-344_AlphaFold_Prediction_exclude_after_H8_dimer_align_7EB2_GABAb_merge_7EB2_Gproteins.pdb
(#2) to map cryosparc_P97_J100_class_01_00181_volume_sharp.mrc z flip (#3)
using 12996 atoms  
average map value = 1.167, steps = 176  
shifted from previous position = 7.88  
rotated from previous position = 20.5 degrees  
atoms outside contour = 6334, contour level = 0.99398  
  
Position of
hGPR156_1-344_AlphaFold_Prediction_exclude_after_H8_dimer_align_7EB2_GABAb_merge_7EB2_Gproteins.pdb
(#2) relative to cryosparc_P97_J100_class_01_00181_volume_sharp.mrc z flip
(#3) coordinates:  
Matrix rotation and translation  
0.93503640 -0.33525038 -0.11538680 183.15384761  
-0.31561268 -0.63875390 -0.70169944 150.91903738  
0.16154123 0.69253205 -0.70306741 179.85059217  
Axis 0.98074575 -0.19479979 0.01381377  
Axis point 0.00000000 55.83643610 127.07046870  
Rotation angle (degrees) 134.69981882  
Shift along axis 152.71277627  
  

> view matrix models
> #2,0.93504,-0.33525,-0.11539,180.46,-0.31561,-0.63875,-0.7017,147.52,0.16154,0.69253,-0.70307,172.99

> view matrix models
> #2,0.93504,-0.33525,-0.11539,183.41,-0.31561,-0.63875,-0.7017,151.22,0.16154,0.69253,-0.70307,180

> fitmap #2 inMap #3

Fit molecule
hGPR156_1-344_AlphaFold_Prediction_exclude_after_H8_dimer_align_7EB2_GABAb_merge_7EB2_Gproteins.pdb
(#2) to map cryosparc_P97_J100_class_01_00181_volume_sharp.mrc z flip (#3)
using 12996 atoms  
average map value = 1.167, steps = 84  
shifted from previous position = 0.428  
rotated from previous position = 0.00126 degrees  
atoms outside contour = 6334, contour level = 0.99398  
  
Position of
hGPR156_1-344_AlphaFold_Prediction_exclude_after_H8_dimer_align_7EB2_GABAb_merge_7EB2_Gproteins.pdb
(#2) relative to cryosparc_P97_J100_class_01_00181_volume_sharp.mrc z flip
(#3) coordinates:  
Matrix rotation and translation  
0.93503562 -0.33525490 -0.11538000 183.15318361  
-0.31560783 -0.63874026 -0.70171403 150.91919086  
0.16155522 0.69254244 -0.70305397 179.85304451  
Axis 0.98074536 -0.19480127 0.01382011  
Axis point 0.00000000 55.83527807 127.07221203  
Rotation angle (degrees) 134.69875880  
Shift along axis 152.71297430  
  

> ui mousemode right select

> select clear

Drag select of 2 residues, 3
cryosparc_P97_J100_class_01_00181_volume_sharp.mrc z flip  

> select clear

> volume #3 color #b2b2b280

> hide #!2 models

> show #!2 models

> hide #!2 models

> volume #3 level 1.022

> open
> /Users/sjws_rmbp/Downloads/cryosparc_P97_J101_class_00_00161_volume_sharp.mrc

Opened cryosparc_P97_J101_class_00_00161_volume_sharp.mrc as #1, grid size
128,128,128, pixel 2.45, shown at level 0.899, step 1, values float32  

> volume #1 level 1.158

> close #1

> open
> /Users/sjws_rmbp/Downloads/cryosparc_P97_J100_class_01_00182_volume_sharp.mrc

Opened cryosparc_P97_J100_class_01_00182_volume_sharp.mrc as #1, grid size
128,128,128, pixel 2.45, shown at level 0.934, step 1, values float32  

> volume #1 level 1.176

> volume #1 level 1.41

> open
> "/Users/sjws_rmbp/Downloads/cryosparc_P97_J100_class_01_00182_volume_sharp
> (1).mrc"

Opened cryosparc_P97_J100_class_01_00182_volume_sharp (1).mrc as #4, grid size
128,128,128, pixel 2.45, shown at level 0.934, step 1, values float32  

> close #1

> volume #4 level 1.176

Drag select of 4 cryosparc_P97_J100_class_01_00182_volume_sharp (1).mrc  

> select clear

> volume flip #4

Opened cryosparc_P97_J100_class_01_00182_volume_sharp (1).mrc z flip as #1,
grid size 128,128,128, pixel 2.45, shown at step 1, values float32  

> show #!2 models

> volume #1 color #ffb2ff80

> volume #1 level 0.8495

> volume #1 level 0.9015

> hide #!2 models

> volume #1 level 1.057

> show #!2 models

> hide #!2 models

> volume #1 level 0.9682

> show #!2 models

> open /Users/sjws_rmbp/Downloads/cryosparc_P97_J123_003_volume_map_sharp.mrc

Opened cryosparc_P97_J123_003_volume_map_sharp.mrc as #5, grid size
360,360,360, pixel 0.87, shown at level 0.198, step 2, values float32  

> volume #5 level 0.2621

> volume #5 level 0.231

> volume #5 step 1

> volume #5 level 0.2772

> volume #5 level 0.3423

> volume #5 level 0.3129

> volume #5 level 0.3549

> close #5

> open
> /Users/sjws_rmbp/Downloads/cryosparc_P97_J101_class_00_00162_volume_sharp.mrc

Opened cryosparc_P97_J101_class_00_00162_volume_sharp.mrc as #5, grid size
128,128,128, pixel 2.45, shown at level 0.908, step 1, values float32  

> volume #5 level 0.9594

> volume #5 level 1.164

> open
> /Users/sjws_rmbp/Downloads/cryosparc_P97_J102_class_03_00180_volume_sharp.mrc

Opened cryosparc_P97_J102_class_03_00180_volume_sharp.mrc as #6, grid size
128,128,128, pixel 2.45, shown at level 0.891, step 1, values float32  

> volume #6 level 0.8229

> volume #6 level 0.8043

> close #6

> open /Users/sjws_rmbp/Downloads/cryosparc_P97_J123_004_volume_map_sharp.mrc

Opened cryosparc_P97_J123_004_volume_map_sharp.mrc as #6, grid size
360,360,360, pixel 0.87, shown at level 0.203, step 2, values float32  

> volume #6 step 1

> volume #6 level 0.3567

> hide #!2 models

Mismatch between Cocoa '\x0' and Carbon '\xd' for virtual key 36 with
QFlags(NoModifier)  

Mismatch between Cocoa '\x0' and Carbon '\xd' for virtual key 36 with
QFlags(ShiftModifier)  

Mismatch between Cocoa '\x0' and Carbon '\xd' for virtual key 36 with
QFlags(ControlModifier)  

Mismatch between Cocoa '\x0' and Carbon '\xd' for virtual key 36 with
QFlags(ShiftModifier|ControlModifier)  

Mismatch between Cocoa '\x0' and Carbon '\xd' for virtual key 36 with
QFlags(AltModifier)  

Mismatch between Cocoa '\x0' and Carbon '\xd' for virtual key 36 with
QFlags(ShiftModifier|AltModifier)  

Mismatch between Cocoa '\x0' and Carbon '\xd' for virtual key 36 with
QFlags(ControlModifier|AltModifier)  

Mismatch between Cocoa '\x0' and Carbon '\xd' for virtual key 36 with
QFlags(ShiftModifier|ControlModifier|AltModifier)  

Mismatch between Cocoa '\x0' and Carbon '\xd' for virtual key 36 with
QFlags(MetaModifier)  

Mismatch between Cocoa '\x0' and Carbon '\xd' for virtual key 36 with
QFlags(ShiftModifier|MetaModifier)  

Mismatch between Cocoa '\x0' and Carbon '\xd' for virtual key 36 with
QFlags(ControlModifier|MetaModifier)  

Mismatch between Cocoa '\x0' and Carbon '\xd' for virtual key 36 with
QFlags(ShiftModifier|ControlModifier|MetaModifier)  

Mismatch between Cocoa '\x0' and Carbon '\xd' for virtual key 36 with
QFlags(AltModifier|MetaModifier)  

Mismatch between Cocoa '\x0' and Carbon '\xd' for virtual key 36 with
QFlags(ShiftModifier|AltModifier|MetaModifier)  

Mismatch between Cocoa '\x0' and Carbon '\xd' for virtual key 36 with
QFlags(ControlModifier|AltModifier|MetaModifier)  

Mismatch between Cocoa '\x0' and Carbon '\xd' for virtual key 36 with
QFlags(ShiftModifier|ControlModifier|AltModifier|MetaModifier)  

> volume flip #6

Opened cryosparc_P97_J123_004_volume_map_sharp.mrc z flip as #7, grid size
360,360,360, pixel 0.87, shown at step 1, values float32  

> show #!2 models

> volume #6 color #cccc9940

> close #6


===== Log before crash end =====

Log:
UCSF ChimeraX version: 1.4 (2022-06-03)  
© 2016-2022 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open "/Users/sjws_rmbp/Downloads/cryosparc_P97_J123_004_volume_map_sharp
> (1).mrc"

Opened cryosparc_P97_J123_004_volume_map_sharp (1).mrc as #1, grid size
360,360,360, pixel 0.87, shown at level 0.203, step 2, values float32  




OpenGL version: 4.1 Metal - 76.3
OpenGL renderer: Apple M1 Max
OpenGL vendor: Apple

Python: 3.9.11
Locale: UTF-8
Qt version: PyQt6 6.3.0, Qt 6.3.0
Qt runtime version: 6.3.0
Qt platform: cocoa
Hardware:

    Hardware Overview:

      Model Name: MacBook Pro
      Model Identifier: MacBookPro18,2
      Processor Name: Unknown
      Processor Speed: 2.4 GHz
      Number of Processors: 1
      Total Number of Cores: 10
      L2 Cache: 20 MB
      Memory: 32 GB

Software:

    System Software Overview:

      System Version: macOS 12.6 (21G115)
      Kernel Version: Darwin 21.6.0
      Time since boot: 2 days 6:26

Graphics/Displays:

    Apple M1 Max:

      Chipset Model: Apple M1 Max
      Type: GPU
      Bus: Built-In
      Total Number of Cores: 32
      Vendor: Apple (0x106b)
      Metal Family: Supported, Metal GPUFamily Apple 7
      Displays:
        LG HDR 5K:
          Resolution: 5120 x 2160 (Ultra-wide 5K)
          UI Looks like: 2560 x 1080 @ 60.00Hz
          Main Display: Yes
          Mirror: Off
          Online: Yes


Installed Packages:
    alabaster: 0.7.12
    appdirs: 1.4.4
    appnope: 0.1.3
    Babel: 2.10.1
    backcall: 0.2.0
    blockdiag: 3.0.0
    certifi: 2021.10.8
    cftime: 1.6.0
    charset-normalizer: 2.0.12
    ChimeraX-AddCharge: 1.2.3
    ChimeraX-AddH: 2.1.11
    ChimeraX-AlignmentAlgorithms: 2.0
    ChimeraX-AlignmentHdrs: 3.2.1
    ChimeraX-AlignmentMatrices: 2.0
    ChimeraX-Alignments: 2.4.3
    ChimeraX-AlphaFold: 1.0
    ChimeraX-AltlocExplorer: 1.0.2
    ChimeraX-AmberInfo: 1.0
    ChimeraX-Arrays: 1.0
    ChimeraX-Atomic: 1.39.1
    ChimeraX-AtomicLibrary: 7.0
    ChimeraX-AtomSearch: 2.0.1
    ChimeraX-AxesPlanes: 2.1
    ChimeraX-BasicActions: 1.1
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 2.1.1
    ChimeraX-BondRot: 2.0
    ChimeraX-BugReporter: 1.0
    ChimeraX-BuildStructure: 2.7
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.1
    ChimeraX-ButtonPanel: 1.0
    ChimeraX-CageBuilder: 1.0
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.2
    ChimeraX-ChemGroup: 2.0
    ChimeraX-Clashes: 2.2.4
    ChimeraX-ColorActions: 1.0
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-ColorKey: 1.5.1
    ChimeraX-CommandLine: 1.2.3
    ChimeraX-ConnectStructure: 2.0.1
    ChimeraX-Contacts: 1.0
    ChimeraX-Core: 1.4
    ChimeraX-CoreFormats: 1.1
    ChimeraX-coulombic: 1.3.2
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-CrystalContacts: 1.0
    ChimeraX-DataFormats: 1.2.2
    ChimeraX-Dicom: 1.1
    ChimeraX-DistMonitor: 1.1.5
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ExperimentalCommands: 1.0
    ChimeraX-FileHistory: 1.0
    ChimeraX-FunctionKey: 1.0
    ChimeraX-Geometry: 1.2
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.1
    ChimeraX-Hbonds: 2.1.2
    ChimeraX-Help: 1.2
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.1
    ChimeraX-ImageFormats: 1.2
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0.1
    ChimeraX-ItemsInspection: 1.0
    ChimeraX-Label: 1.1.1
    ChimeraX-ListInfo: 1.1.1
    ChimeraX-Log: 1.1.5
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Maestro: 1.8.1
    ChimeraX-Map: 1.1
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0
    ChimeraX-MapFilter: 2.0
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.1
    ChimeraX-Markers: 1.0
    ChimeraX-Mask: 1.0
    ChimeraX-MatchMaker: 2.0.6
    ChimeraX-MDcrds: 2.6
    ChimeraX-MedicalToolbar: 1.0.1
    ChimeraX-Meeting: 1.0
    ChimeraX-MLP: 1.1
    ChimeraX-mmCIF: 2.7
    ChimeraX-MMTF: 2.1
    ChimeraX-Modeller: 1.5.5
    ChimeraX-ModelPanel: 1.3.2
    ChimeraX-ModelSeries: 1.0
    ChimeraX-Mol2: 2.0
    ChimeraX-Morph: 1.0
    ChimeraX-MouseModes: 1.1
    ChimeraX-Movie: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nucleotides: 2.0.2
    ChimeraX-OpenCommand: 1.9
    ChimeraX-PDB: 2.6.6
    ChimeraX-PDBBio: 1.0
    ChimeraX-PDBLibrary: 1.0.2
    ChimeraX-PDBMatrices: 1.0
    ChimeraX-PickBlobs: 1.0
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.1
    ChimeraX-PubChem: 2.1
    ChimeraX-ReadPbonds: 1.0.1
    ChimeraX-Registration: 1.1
    ChimeraX-RemoteControl: 1.0
    ChimeraX-ResidueFit: 1.0
    ChimeraX-RestServer: 1.1
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 2.0.1
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.5.1
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0
    ChimeraX-SelInspector: 1.0
    ChimeraX-SeqView: 2.6
    ChimeraX-Shape: 1.0.1
    ChimeraX-Shell: 1.0
    ChimeraX-Shortcuts: 1.1
    ChimeraX-ShowAttr: 1.0
    ChimeraX-ShowSequences: 1.0
    ChimeraX-SideView: 1.0
    ChimeraX-Smiles: 2.1
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.8
    ChimeraX-STL: 1.0
    ChimeraX-Storm: 1.0
    ChimeraX-StructMeasure: 1.0.1
    ChimeraX-Struts: 1.0.1
    ChimeraX-Surface: 1.0
    ChimeraX-SwapAA: 2.0
    ChimeraX-SwapRes: 2.1.1
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.1.1
    ChimeraX-ToolshedUtils: 1.2.1
    ChimeraX-Tug: 1.0
    ChimeraX-UI: 1.18.3
    ChimeraX-uniprot: 2.2
    ChimeraX-UnitCell: 1.0
    ChimeraX-ViewDockX: 1.1.2
    ChimeraX-VIPERdb: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0
    ChimeraX-WebServices: 1.1.0
    ChimeraX-Zone: 1.0
    colorama: 0.4.4
    cxservices: 1.2
    cycler: 0.11.0
    Cython: 0.29.26
    debugpy: 1.6.0
    decorator: 5.1.1
    docutils: 0.17.1
    entrypoints: 0.4
    filelock: 3.4.2
    fonttools: 4.33.3
    funcparserlib: 1.0.0
    grako: 3.16.5
    h5py: 3.7.0
    html2text: 2020.1.16
    idna: 3.3
    ihm: 0.27
    imagecodecs: 2021.11.20
    imagesize: 1.3.0
    ipykernel: 6.6.1
    ipython: 7.31.1
    ipython-genutils: 0.2.0
    jedi: 0.18.1
    Jinja2: 3.0.3
    jupyter-client: 7.1.0
    jupyter-core: 4.10.0
    kiwisolver: 1.4.2
    line-profiler: 3.4.0
    lxml: 4.7.1
    lz4: 3.1.10
    MarkupSafe: 2.1.1
    matplotlib: 3.5.1
    matplotlib-inline: 0.1.3
    msgpack: 1.0.3
    nest-asyncio: 1.5.5
    netCDF4: 1.5.8
    networkx: 2.6.3
    numexpr: 2.8.1
    numpy: 1.22.1
    openvr: 1.16.802
    packaging: 21.0
    ParmEd: 3.4.3
    parso: 0.8.3
    pexpect: 4.8.0
    pickleshare: 0.7.5
    Pillow: 9.0.1
    pip: 21.3.1
    pkginfo: 1.8.2
    prompt-toolkit: 3.0.29
    psutil: 5.9.0
    ptyprocess: 0.7.0
    pycollada: 0.7.2
    pydicom: 2.2.2
    Pygments: 2.11.2
    PyOpenGL: 3.1.5
    PyOpenGL-accelerate: 3.1.5
    pyparsing: 3.0.9
    PyQt6-commercial: 6.3.0
    PyQt6-Qt6: 6.3.0
    PyQt6-sip: 13.3.1
    PyQt6-WebEngine-commercial: 6.3.0
    PyQt6-WebEngine-Qt6: 6.3.0
    python-dateutil: 2.8.2
    pytz: 2022.1
    pyzmq: 23.1.0
    qtconsole: 5.3.0
    QtPy: 2.1.0
    RandomWords: 0.3.0
    requests: 2.27.1
    scipy: 1.7.3
    setuptools: 59.8.0
    sfftk-rw: 0.7.2
    six: 1.16.0
    snowballstemmer: 2.2.0
    sortedcontainers: 2.4.0
    Sphinx: 4.3.2
    sphinx-autodoc-typehints: 1.15.2
    sphinxcontrib-applehelp: 1.0.2
    sphinxcontrib-blockdiag: 3.0.0
    sphinxcontrib-devhelp: 1.0.2
    sphinxcontrib-htmlhelp: 2.0.0
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 1.0.3
    sphinxcontrib-serializinghtml: 1.1.5
    suds-community: 1.0.0
    tables: 3.7.0
    tifffile: 2021.11.2
    tinyarray: 1.2.4
    tornado: 6.1
    traitlets: 5.1.1
    urllib3: 1.26.9
    wcwidth: 0.2.5
    webcolors: 1.11.1
    wheel: 0.37.1
    wheel-filename: 1.3.0

Change History (2)

comment:1 by pett, 3 years ago

Component: Unassigned → UI
Owner: set to pett
Platform: → all
Project: → ChimeraX
Status: new → accepted
Summary: ChimeraX bug report submission → Crash in color button callback

comment:2 by pett, 3 years ago

Resolution: → can't reproduce
Status: accepted → closed

Possibly fixed by commit d7389d14caf539e5563c46b5391cd30eef16a210

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