The following bug report has been submitted:
Platform: macOS-10.15.7-x86_64-i386-64bit
ChimeraX Version: 1.3 (2021-12-08 23:08:33 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Fatal Python error: Segmentation fault
Thread 0x00007000144d0000 (most recent call first):
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 316 in wait
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 574 in wait
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 1284 in run
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x000070002758c000 (most recent call first):
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 576 in _handle_results
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x0000700026589000 (most recent call first):
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 528 in _handle_tasks
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x0000700025586000 (most recent call first):
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/selectors.py", line 416 in select
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/connection.py", line 936 in wait
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 499 in _wait_for_updates
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 519 in _handle_workers
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x0000700024583000 (most recent call first):
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 114 in worker
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x0000700023580000 (most recent call first):
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 114 in worker
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x000070002257d000 (most recent call first):
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 114 in worker
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x000070002157a000 (most recent call first):
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 114 in worker
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x0000700020577000 (most recent call first):
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 114 in worker
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x000070001f574000 (most recent call first):
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 114 in worker
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x000070001e571000 (most recent call first):
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 114 in worker
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x000070001d56e000 (most recent call first):
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 114 in worker
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x000070001c56b000 (most recent call first):
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 114 in worker
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x000070001b568000 (most recent call first):
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 114 in worker
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x000070001a565000 (most recent call first):
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 114 in worker
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x0000700019562000 (most recent call first):
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 114 in worker
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x000070001855f000 (most recent call first):
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 114 in worker
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x000070001755c000 (most recent call first):
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 114 in worker
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x0000700016559000 (most recent call first):
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 114 in worker
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x0000700015556000 (most recent call first):
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 114 in worker
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Current thread 0x000000011165fdc0 (most recent call first):
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/ui/gui.py", line 301 in event_loop
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/ChimeraX_main.py", line 867 in init
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/ChimeraX_main.py", line 1018 in
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 87 in _run_code
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 197 in _run_module_as_main
Process: ChimeraX [604]
Path: /Applications/ChimeraX-1.3.app/Contents/MacOS/ChimeraX
Identifier: edu.ucsf.cgl.ChimeraX
Version: 1.3.0 (1.3.0.0)
Code Type: X86-64 (Native)
Parent Process: ??? [1]
Responsible: ChimeraX [604]
User ID: 573055
Date/Time: 2022-07-28 15:04:14.834 +0200
OS Version: Mac OS X 10.15.7 (19H1615)
Report Version: 12
Bridge OS Version: 6.1 (19P647)
Anonymous UUID: BF10E68F-7EB4-A7BF-BFD0-67ED6F3CDCA0
Time Awake Since Boot: 270000 seconds
System Integrity Protection: enabled
Crashed Thread: 0 CrBrowserMain Dispatch queue: com.apple.main-thread
Exception Type: EXC_BAD_ACCESS (SIGSEGV)
Exception Codes: EXC_I386_GPFLT
Exception Note: EXC_CORPSE_NOTIFY
Thread 0 Crashed:: CrBrowserMain Dispatch queue: com.apple.main-thread
0 libsystem_kernel.dylib 0x00007fff711fc33a __pthread_kill + 10
1 libsystem_pthread.dylib 0x00007fff712b8e60 pthread_kill + 430
2 libsystem_c.dylib 0x00007fff7111393e raise + 26
3 libsystem_platform.dylib 0x00007fff712ad5fd _sigtramp + 29
4 ??? 000000000000000000 0 + 0
5 org.python.python 0x000000010be6c06d cfunction_call + 125
6 org.python.python 0x000000010be2d6cc _PyObject_Call + 140
7 QtCore.abi3.so 0x00000001111e9957 PyQtSlot::call(_object*, _object*) const + 39
8 QtCore.abi3.so 0x00000001111e9866 PyQtSlot::invoke(void**, _object*, void*, bool) const + 374
9 QtCore.abi3.so 0x00000001111ea455 PyQtSlotProxy::unislot(void**) + 85
10 QtCore.abi3.so 0x00000001111ea3ca PyQtSlotProxy::qt_metacall(QMetaObject::Call, int, void**) + 58
11 QtCore 0x00000001218bdb9f QObject::event(QEvent*) + 943
12 QtWidgets 0x0000000123e3f9ea QApplicationPrivate::notify_helper(QObject*, QEvent*) + 266
13 QtWidgets 0x0000000123e40e11 QApplication::notify(QObject*, QEvent*) + 497
14 QtWidgets.abi3.so 0x00000001239f2db9 sipQApplication::notify(QObject*, QEvent*) + 233
15 QtCore 0x0000000121892a34 QCoreApplication::notifyInternal2(QObject*, QEvent*) + 212
16 QtCore 0x0000000121893d79 QCoreApplicationPrivate::sendPostedEvents(QObject*, int, QThreadData*) + 809
17 libqcocoa.dylib 0x000000013209d259 QCocoaEventDispatcherPrivate::processPostedEvents() + 313
18 libqcocoa.dylib 0x000000013209d9c8 QCocoaEventDispatcherPrivate::postedEventsSourceCallback(void*) + 40
19 com.apple.CoreFoundation 0x00007fff37317682 __CFRUNLOOP_IS_CALLING_OUT_TO_A_SOURCE0_PERFORM_FUNCTION__ + 17
20 com.apple.CoreFoundation 0x00007fff37317621 __CFRunLoopDoSource0 + 103
21 com.apple.CoreFoundation 0x00007fff3731743b __CFRunLoopDoSources0 + 209
22 com.apple.CoreFoundation 0x00007fff3731616a __CFRunLoopRun + 927
23 com.apple.CoreFoundation 0x00007fff3731576e CFRunLoopRunSpecific + 462
24 com.apple.HIToolbox 0x00007fff35f41aad RunCurrentEventLoopInMode + 292
25 com.apple.HIToolbox 0x00007fff35f416e4 ReceiveNextEventCommon + 359
26 com.apple.HIToolbox 0x00007fff35f41569 _BlockUntilNextEventMatchingListInModeWithFilter + 64
27 com.apple.AppKit 0x00007fff3458a659 _DPSNextEvent + 883
28 com.apple.AppKit 0x00007fff34588ea0 -[NSApplication(NSEvent) _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 1352
29 com.apple.AppKit 0x00007fff3457abae -[NSApplication run] + 658
30 libqcocoa.dylib 0x000000013209c62f QCocoaEventDispatcher::processEvents(QFlags) + 2495
31 QtCore 0x000000012188eacf QEventLoop::exec(QFlags) + 431
32 QtCore 0x0000000121893042 QCoreApplication::exec() + 130
33 QtWidgets.abi3.so 0x0000000123ae4702 meth_QApplication_exec_(_object*, _object*) + 82
34 org.python.python 0x000000010be6c06d cfunction_call + 125
35 org.python.python 0x000000010be2d17d _PyObject_MakeTpCall + 365
36 org.python.python 0x000000010bf0561c call_function + 876
37 org.python.python 0x000000010bf02ab3 _PyEval_EvalFrameDefault + 25219
38 org.python.python 0x000000010be2d948 function_code_fastcall + 104
39 org.python.python 0x000000010be2f98a method_vectorcall + 202
40 org.python.python 0x000000010bf0558c call_function + 732
41 org.python.python 0x000000010bf02ab3 _PyEval_EvalFrameDefault + 25219
42 org.python.python 0x000000010bf06283 _PyEval_EvalCode + 2611
43 org.python.python 0x000000010be2d8d1 _PyFunction_Vectorcall + 289
44 org.python.python 0x000000010bf0558c call_function + 732
45 org.python.python 0x000000010bf02b4b _PyEval_EvalFrameDefault + 25371
46 org.python.python 0x000000010bf06283 _PyEval_EvalCode + 2611
47 org.python.python 0x000000010befc70b PyEval_EvalCode + 139
48 org.python.python 0x000000010bef9592 builtin_exec + 626
49 org.python.python 0x000000010be6b86a cfunction_vectorcall_FASTCALL + 218
50 org.python.python 0x000000010bf0558c call_function + 732
51 org.python.python 0x000000010bf02b4b _PyEval_EvalFrameDefault + 25371
52 org.python.python 0x000000010bf06283 _PyEval_EvalCode + 2611
53 org.python.python 0x000000010be2d8d1 _PyFunction_Vectorcall + 289
54 org.python.python 0x000000010bf0558c call_function + 732
55 org.python.python 0x000000010bf02b4b _PyEval_EvalFrameDefault + 25371
56 org.python.python 0x000000010bf06283 _PyEval_EvalCode + 2611
57 org.python.python 0x000000010be2d8d1 _PyFunction_Vectorcall + 289
58 org.python.python 0x000000010bf6be20 pymain_run_module + 208
59 org.python.python 0x000000010bf6b537 Py_RunMain + 1431
60 org.python.python 0x000000010bf6bb3f pymain_main + 223
61 org.python.python 0x000000010bf6ba4b Py_Main + 43
62 edu.ucsf.cgl.ChimeraX 0x000000010bdeadc8 main + 120
63 libdyld.dylib 0x00007fff710b4cc9 start + 1
Thread 1:: ThreadPoolServiceThread
0 libsystem_kernel.dylib 0x00007fff711feb96 kevent64 + 10
1 QtWebEngineCore 0x0000000127950e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x0000000127950cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x00000001278d962b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x000000012789d7cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x00000001278e4a94 base::internal::ServiceThread::Run(base::RunLoop*) + 20
6 QtWebEngineCore 0x00000001278f8a7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x0000000127941e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 2:: ThreadPoolBackgroundWorker
0 libsystem_kernel.dylib 0x00007fff711f5dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff711f6170 mach_msg + 60
2 QtWebEngineCore 0x0000000127946492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001278ee778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x00000001278ef150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x00000001278eec44 base::internal::WorkerThread::RunBackgroundPooledWorker() + 20
6 QtWebEngineCore 0x0000000127941e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 3:: Chrome_IOThread
0 libsystem_kernel.dylib 0x00007fff711feb96 kevent64 + 10
1 QtWebEngineCore 0x0000000127950e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x0000000127950cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x00000001278d962b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x000000012789d7cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x000000012b81df06 content::BrowserProcessSubThread::IOThreadRun(base::RunLoop*) + 102
6 QtWebEngineCore 0x00000001278f8a7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x0000000127941e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 4:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff711f5dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff711f6170 mach_msg + 60
2 QtWebEngineCore 0x0000000127946492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001279462cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000012786e1db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x00000001278d962b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x000000012789d7cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x00000001278f8a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x0000000127941e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
10 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 5:: CompositorTileWorker1
0 libsystem_kernel.dylib 0x00007fff711f8882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff712b9425 _pthread_cond_wait + 698
2 QtWebEngineCore 0x000000012793de18 base::ConditionVariable::Wait() + 104
3 QtWebEngineCore 0x0000000128bf55f8 non-virtual thunk to cc::SingleThreadTaskGraphRunner::Run() + 56
4 QtWebEngineCore 0x0000000127941e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
5 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
6 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 6:: Chrome_InProcGpuThread
0 libsystem_kernel.dylib 0x00007fff711f5dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff711f6170 mach_msg + 60
2 QtWebEngineCore 0x0000000127946492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000012786e20f base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 223
4 QtWebEngineCore 0x00000001278d962b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
5 QtWebEngineCore 0x000000012789d7cb base::RunLoop::Run() + 395
6 QtWebEngineCore 0x00000001278f8a7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x0000000127941e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 7:: Chrome_ChildIOThread
0 libsystem_kernel.dylib 0x00007fff711feb96 kevent64 + 10
1 QtWebEngineCore 0x0000000127950e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x0000000127950cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x00000001278d962b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x000000012789d7cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x00000001278f8a7d base::Thread::ThreadMain() + 413
6 QtWebEngineCore 0x0000000127941e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 8:: VizCompositorThread
0 libsystem_kernel.dylib 0x00007fff711f5dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff711f6170 mach_msg + 60
2 QtWebEngineCore 0x0000000127946492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000012786e20f base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 223
4 QtWebEngineCore 0x00000001278d962b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
5 QtWebEngineCore 0x000000012789d7cb base::RunLoop::Run() + 395
6 QtWebEngineCore 0x00000001278f8a7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x0000000127941e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 9:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff711f5dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff711f6170 mach_msg + 60
2 QtWebEngineCore 0x0000000127946492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001279462cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000012786e1db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x00000001278d962b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x000000012789d7cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x00000001278f8a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x0000000127941e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
10 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 10:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff711f5dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff711f6170 mach_msg + 60
2 QtWebEngineCore 0x0000000127946492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001279462cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000012786e1db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x00000001278d962b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x000000012789d7cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x00000001278f8a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x0000000127941e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
10 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 11:: ThreadPoolSingleThreadForegroundBlocking0
0 libsystem_kernel.dylib 0x00007fff711f5dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff711f6170 mach_msg + 60
2 QtWebEngineCore 0x0000000127946492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001279462cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001278ee76a base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 42
5 QtWebEngineCore 0x00000001278ef150 base::internal::WorkerThread::RunWorker() + 1024
6 QtWebEngineCore 0x00000001278eed34 base::internal::WorkerThread::RunDedicatedWorker() + 20
7 QtWebEngineCore 0x0000000127941e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 12:: MemoryInfra
0 libsystem_kernel.dylib 0x00007fff711f5dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff711f6170 mach_msg + 60
2 QtWebEngineCore 0x0000000127946492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001279462cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000012786e1db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x00000001278d962b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x000000012789d7cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x00000001278f8a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x0000000127941e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
10 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 13:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff711f5dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff711f6170 mach_msg + 60
2 QtWebEngineCore 0x0000000127946492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001279462cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000012786e1db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x00000001278d962b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x000000012789d7cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x00000001278f8a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x0000000127941e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
10 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 14:
0 libsystem_kernel.dylib 0x00007fff711f8882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff712b9425 _pthread_cond_wait + 698
2 org.python.python 0x000000010bf5bc76 PyThread_acquire_lock_timed + 454
3 _queue.cpython-39-darwin.so 0x000000015046957e _queue_SimpleQueue_get_impl + 526
4 _queue.cpython-39-darwin.so 0x0000000150469126 _queue_SimpleQueue_get + 198
5 org.python.python 0x000000010be6b934 cfunction_vectorcall_FASTCALL_KEYWORDS + 132
6 org.python.python 0x000000010bf0558c call_function + 732
7 org.python.python 0x000000010bf02b4b _PyEval_EvalFrameDefault + 25371
8 org.python.python 0x000000010bf06283 _PyEval_EvalCode + 2611
9 org.python.python 0x000000010be2d8d1 _PyFunction_Vectorcall + 289
10 org.python.python 0x000000010bf031c3 _PyEval_EvalFrameDefault + 27027
11 org.python.python 0x000000010be2d948 function_code_fastcall + 104
12 org.python.python 0x000000010bf0558c call_function + 732
13 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
14 org.python.python 0x000000010be2d948 function_code_fastcall + 104
15 org.python.python 0x000000010bf0558c call_function + 732
16 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
17 org.python.python 0x000000010be2d948 function_code_fastcall + 104
18 org.python.python 0x000000010be2f9d2 method_vectorcall + 274
19 org.python.python 0x000000010bfaa3c6 t_bootstrap + 70
20 org.python.python 0x000000010bf5b8c9 pythread_wrapper + 25
21 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
22 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 15:
0 libsystem_kernel.dylib 0x00007fff711f8882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff712b9425 _pthread_cond_wait + 698
2 org.python.python 0x000000010bf5bc76 PyThread_acquire_lock_timed + 454
3 _queue.cpython-39-darwin.so 0x000000015046957e _queue_SimpleQueue_get_impl + 526
4 _queue.cpython-39-darwin.so 0x0000000150469126 _queue_SimpleQueue_get + 198
5 org.python.python 0x000000010be6b934 cfunction_vectorcall_FASTCALL_KEYWORDS + 132
6 org.python.python 0x000000010bf0558c call_function + 732
7 org.python.python 0x000000010bf02b4b _PyEval_EvalFrameDefault + 25371
8 org.python.python 0x000000010bf06283 _PyEval_EvalCode + 2611
9 org.python.python 0x000000010be2d8d1 _PyFunction_Vectorcall + 289
10 org.python.python 0x000000010bf031c3 _PyEval_EvalFrameDefault + 27027
11 org.python.python 0x000000010be2d948 function_code_fastcall + 104
12 org.python.python 0x000000010bf0558c call_function + 732
13 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
14 org.python.python 0x000000010be2d948 function_code_fastcall + 104
15 org.python.python 0x000000010bf0558c call_function + 732
16 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
17 org.python.python 0x000000010be2d948 function_code_fastcall + 104
18 org.python.python 0x000000010be2f9d2 method_vectorcall + 274
19 org.python.python 0x000000010bfaa3c6 t_bootstrap + 70
20 org.python.python 0x000000010bf5b8c9 pythread_wrapper + 25
21 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
22 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 16:
0 libsystem_kernel.dylib 0x00007fff711f8882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff712b9425 _pthread_cond_wait + 698
2 org.python.python 0x000000010bf5bc76 PyThread_acquire_lock_timed + 454
3 _queue.cpython-39-darwin.so 0x000000015046957e _queue_SimpleQueue_get_impl + 526
4 _queue.cpython-39-darwin.so 0x0000000150469126 _queue_SimpleQueue_get + 198
5 org.python.python 0x000000010be6b934 cfunction_vectorcall_FASTCALL_KEYWORDS + 132
6 org.python.python 0x000000010bf0558c call_function + 732
7 org.python.python 0x000000010bf02b4b _PyEval_EvalFrameDefault + 25371
8 org.python.python 0x000000010bf06283 _PyEval_EvalCode + 2611
9 org.python.python 0x000000010be2d8d1 _PyFunction_Vectorcall + 289
10 org.python.python 0x000000010bf031c3 _PyEval_EvalFrameDefault + 27027
11 org.python.python 0x000000010be2d948 function_code_fastcall + 104
12 org.python.python 0x000000010bf0558c call_function + 732
13 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
14 org.python.python 0x000000010be2d948 function_code_fastcall + 104
15 org.python.python 0x000000010bf0558c call_function + 732
16 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
17 org.python.python 0x000000010be2d948 function_code_fastcall + 104
18 org.python.python 0x000000010be2f9d2 method_vectorcall + 274
19 org.python.python 0x000000010bfaa3c6 t_bootstrap + 70
20 org.python.python 0x000000010bf5b8c9 pythread_wrapper + 25
21 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
22 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 17:
0 libsystem_kernel.dylib 0x00007fff711f8882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff712b9425 _pthread_cond_wait + 698
2 org.python.python 0x000000010bf5bc76 PyThread_acquire_lock_timed + 454
3 _queue.cpython-39-darwin.so 0x000000015046957e _queue_SimpleQueue_get_impl + 526
4 _queue.cpython-39-darwin.so 0x0000000150469126 _queue_SimpleQueue_get + 198
5 org.python.python 0x000000010be6b934 cfunction_vectorcall_FASTCALL_KEYWORDS + 132
6 org.python.python 0x000000010bf0558c call_function + 732
7 org.python.python 0x000000010bf02b4b _PyEval_EvalFrameDefault + 25371
8 org.python.python 0x000000010bf06283 _PyEval_EvalCode + 2611
9 org.python.python 0x000000010be2d8d1 _PyFunction_Vectorcall + 289
10 org.python.python 0x000000010bf031c3 _PyEval_EvalFrameDefault + 27027
11 org.python.python 0x000000010be2d948 function_code_fastcall + 104
12 org.python.python 0x000000010bf0558c call_function + 732
13 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
14 org.python.python 0x000000010be2d948 function_code_fastcall + 104
15 org.python.python 0x000000010bf0558c call_function + 732
16 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
17 org.python.python 0x000000010be2d948 function_code_fastcall + 104
18 org.python.python 0x000000010be2f9d2 method_vectorcall + 274
19 org.python.python 0x000000010bfaa3c6 t_bootstrap + 70
20 org.python.python 0x000000010bf5b8c9 pythread_wrapper + 25
21 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
22 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 18:
0 libsystem_kernel.dylib 0x00007fff711f8882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff712b9425 _pthread_cond_wait + 698
2 org.python.python 0x000000010bf5bc76 PyThread_acquire_lock_timed + 454
3 _queue.cpython-39-darwin.so 0x000000015046957e _queue_SimpleQueue_get_impl + 526
4 _queue.cpython-39-darwin.so 0x0000000150469126 _queue_SimpleQueue_get + 198
5 org.python.python 0x000000010be6b934 cfunction_vectorcall_FASTCALL_KEYWORDS + 132
6 org.python.python 0x000000010bf0558c call_function + 732
7 org.python.python 0x000000010bf02b4b _PyEval_EvalFrameDefault + 25371
8 org.python.python 0x000000010bf06283 _PyEval_EvalCode + 2611
9 org.python.python 0x000000010be2d8d1 _PyFunction_Vectorcall + 289
10 org.python.python 0x000000010bf031c3 _PyEval_EvalFrameDefault + 27027
11 org.python.python 0x000000010be2d948 function_code_fastcall + 104
12 org.python.python 0x000000010bf0558c call_function + 732
13 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
14 org.python.python 0x000000010be2d948 function_code_fastcall + 104
15 org.python.python 0x000000010bf0558c call_function + 732
16 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
17 org.python.python 0x000000010be2d948 function_code_fastcall + 104
18 org.python.python 0x000000010be2f9d2 method_vectorcall + 274
19 org.python.python 0x000000010bfaa3c6 t_bootstrap + 70
20 org.python.python 0x000000010bf5b8c9 pythread_wrapper + 25
21 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
22 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 19:
0 libsystem_kernel.dylib 0x00007fff711f8882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff712b9425 _pthread_cond_wait + 698
2 org.python.python 0x000000010bf5bc76 PyThread_acquire_lock_timed + 454
3 _queue.cpython-39-darwin.so 0x000000015046957e _queue_SimpleQueue_get_impl + 526
4 _queue.cpython-39-darwin.so 0x0000000150469126 _queue_SimpleQueue_get + 198
5 org.python.python 0x000000010be6b934 cfunction_vectorcall_FASTCALL_KEYWORDS + 132
6 org.python.python 0x000000010bf0558c call_function + 732
7 org.python.python 0x000000010bf02b4b _PyEval_EvalFrameDefault + 25371
8 org.python.python 0x000000010bf06283 _PyEval_EvalCode + 2611
9 org.python.python 0x000000010be2d8d1 _PyFunction_Vectorcall + 289
10 org.python.python 0x000000010bf031c3 _PyEval_EvalFrameDefault + 27027
11 org.python.python 0x000000010be2d948 function_code_fastcall + 104
12 org.python.python 0x000000010bf0558c call_function + 732
13 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
14 org.python.python 0x000000010be2d948 function_code_fastcall + 104
15 org.python.python 0x000000010bf0558c call_function + 732
16 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
17 org.python.python 0x000000010be2d948 function_code_fastcall + 104
18 org.python.python 0x000000010be2f9d2 method_vectorcall + 274
19 org.python.python 0x000000010bfaa3c6 t_bootstrap + 70
20 org.python.python 0x000000010bf5b8c9 pythread_wrapper + 25
21 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
22 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 20:
0 libsystem_kernel.dylib 0x00007fff711f8882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff712b9425 _pthread_cond_wait + 698
2 org.python.python 0x000000010bf5bc76 PyThread_acquire_lock_timed + 454
3 _queue.cpython-39-darwin.so 0x000000015046957e _queue_SimpleQueue_get_impl + 526
4 _queue.cpython-39-darwin.so 0x0000000150469126 _queue_SimpleQueue_get + 198
5 org.python.python 0x000000010be6b934 cfunction_vectorcall_FASTCALL_KEYWORDS + 132
6 org.python.python 0x000000010bf0558c call_function + 732
7 org.python.python 0x000000010bf02b4b _PyEval_EvalFrameDefault + 25371
8 org.python.python 0x000000010bf06283 _PyEval_EvalCode + 2611
9 org.python.python 0x000000010be2d8d1 _PyFunction_Vectorcall + 289
10 org.python.python 0x000000010bf031c3 _PyEval_EvalFrameDefault + 27027
11 org.python.python 0x000000010be2d948 function_code_fastcall + 104
12 org.python.python 0x000000010bf0558c call_function + 732
13 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
14 org.python.python 0x000000010be2d948 function_code_fastcall + 104
15 org.python.python 0x000000010bf0558c call_function + 732
16 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
17 org.python.python 0x000000010be2d948 function_code_fastcall + 104
18 org.python.python 0x000000010be2f9d2 method_vectorcall + 274
19 org.python.python 0x000000010bfaa3c6 t_bootstrap + 70
20 org.python.python 0x000000010bf5b8c9 pythread_wrapper + 25
21 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
22 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 21:
0 libsystem_kernel.dylib 0x00007fff711f8882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff712b9425 _pthread_cond_wait + 698
2 org.python.python 0x000000010bf5bc76 PyThread_acquire_lock_timed + 454
3 _queue.cpython-39-darwin.so 0x000000015046957e _queue_SimpleQueue_get_impl + 526
4 _queue.cpython-39-darwin.so 0x0000000150469126 _queue_SimpleQueue_get + 198
5 org.python.python 0x000000010be6b934 cfunction_vectorcall_FASTCALL_KEYWORDS + 132
6 org.python.python 0x000000010bf0558c call_function + 732
7 org.python.python 0x000000010bf02b4b _PyEval_EvalFrameDefault + 25371
8 org.python.python 0x000000010bf06283 _PyEval_EvalCode + 2611
9 org.python.python 0x000000010be2d8d1 _PyFunction_Vectorcall + 289
10 org.python.python 0x000000010bf031c3 _PyEval_EvalFrameDefault + 27027
11 org.python.python 0x000000010be2d948 function_code_fastcall + 104
12 org.python.python 0x000000010bf0558c call_function + 732
13 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
14 org.python.python 0x000000010be2d948 function_code_fastcall + 104
15 org.python.python 0x000000010bf0558c call_function + 732
16 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
17 org.python.python 0x000000010be2d948 function_code_fastcall + 104
18 org.python.python 0x000000010be2f9d2 method_vectorcall + 274
19 org.python.python 0x000000010bfaa3c6 t_bootstrap + 70
20 org.python.python 0x000000010bf5b8c9 pythread_wrapper + 25
21 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
22 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 22:
0 libsystem_kernel.dylib 0x00007fff711f8882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff712b9425 _pthread_cond_wait + 698
2 org.python.python 0x000000010bf5bc76 PyThread_acquire_lock_timed + 454
3 _queue.cpython-39-darwin.so 0x000000015046957e _queue_SimpleQueue_get_impl + 526
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5 org.python.python 0x000000010be6b934 cfunction_vectorcall_FASTCALL_KEYWORDS + 132
6 org.python.python 0x000000010bf0558c call_function + 732
7 org.python.python 0x000000010bf02b4b _PyEval_EvalFrameDefault + 25371
8 org.python.python 0x000000010bf06283 _PyEval_EvalCode + 2611
9 org.python.python 0x000000010be2d8d1 _PyFunction_Vectorcall + 289
10 org.python.python 0x000000010bf031c3 _PyEval_EvalFrameDefault + 27027
11 org.python.python 0x000000010be2d948 function_code_fastcall + 104
12 org.python.python 0x000000010bf0558c call_function + 732
13 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
14 org.python.python 0x000000010be2d948 function_code_fastcall + 104
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16 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
17 org.python.python 0x000000010be2d948 function_code_fastcall + 104
18 org.python.python 0x000000010be2f9d2 method_vectorcall + 274
19 org.python.python 0x000000010bfaa3c6 t_bootstrap + 70
20 org.python.python 0x000000010bf5b8c9 pythread_wrapper + 25
21 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
22 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 23:
0 libsystem_kernel.dylib 0x00007fff711f8882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff712b9425 _pthread_cond_wait + 698
2 org.python.python 0x000000010bf5bc76 PyThread_acquire_lock_timed + 454
3 _queue.cpython-39-darwin.so 0x000000015046957e _queue_SimpleQueue_get_impl + 526
4 _queue.cpython-39-darwin.so 0x0000000150469126 _queue_SimpleQueue_get + 198
5 org.python.python 0x000000010be6b934 cfunction_vectorcall_FASTCALL_KEYWORDS + 132
6 org.python.python 0x000000010bf0558c call_function + 732
7 org.python.python 0x000000010bf02b4b _PyEval_EvalFrameDefault + 25371
8 org.python.python 0x000000010bf06283 _PyEval_EvalCode + 2611
9 org.python.python 0x000000010be2d8d1 _PyFunction_Vectorcall + 289
10 org.python.python 0x000000010bf031c3 _PyEval_EvalFrameDefault + 27027
11 org.python.python 0x000000010be2d948 function_code_fastcall + 104
12 org.python.python 0x000000010bf0558c call_function + 732
13 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
14 org.python.python 0x000000010be2d948 function_code_fastcall + 104
15 org.python.python 0x000000010bf0558c call_function + 732
16 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
17 org.python.python 0x000000010be2d948 function_code_fastcall + 104
18 org.python.python 0x000000010be2f9d2 method_vectorcall + 274
19 org.python.python 0x000000010bfaa3c6 t_bootstrap + 70
20 org.python.python 0x000000010bf5b8c9 pythread_wrapper + 25
21 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
22 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 24:
0 libsystem_kernel.dylib 0x00007fff711f8882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff712b9425 _pthread_cond_wait + 698
2 org.python.python 0x000000010bf5bc76 PyThread_acquire_lock_timed + 454
3 _queue.cpython-39-darwin.so 0x000000015046957e _queue_SimpleQueue_get_impl + 526
4 _queue.cpython-39-darwin.so 0x0000000150469126 _queue_SimpleQueue_get + 198
5 org.python.python 0x000000010be6b934 cfunction_vectorcall_FASTCALL_KEYWORDS + 132
6 org.python.python 0x000000010bf0558c call_function + 732
7 org.python.python 0x000000010bf02b4b _PyEval_EvalFrameDefault + 25371
8 org.python.python 0x000000010bf06283 _PyEval_EvalCode + 2611
9 org.python.python 0x000000010be2d8d1 _PyFunction_Vectorcall + 289
10 org.python.python 0x000000010bf031c3 _PyEval_EvalFrameDefault + 27027
11 org.python.python 0x000000010be2d948 function_code_fastcall + 104
12 org.python.python 0x000000010bf0558c call_function + 732
13 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
14 org.python.python 0x000000010be2d948 function_code_fastcall + 104
15 org.python.python 0x000000010bf0558c call_function + 732
16 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
17 org.python.python 0x000000010be2d948 function_code_fastcall + 104
18 org.python.python 0x000000010be2f9d2 method_vectorcall + 274
19 org.python.python 0x000000010bfaa3c6 t_bootstrap + 70
20 org.python.python 0x000000010bf5b8c9 pythread_wrapper + 25
21 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
22 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 25:
0 libsystem_kernel.dylib 0x00007fff711f8882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff712b9425 _pthread_cond_wait + 698
2 org.python.python 0x000000010bf5bc76 PyThread_acquire_lock_timed + 454
3 _queue.cpython-39-darwin.so 0x000000015046957e _queue_SimpleQueue_get_impl + 526
4 _queue.cpython-39-darwin.so 0x0000000150469126 _queue_SimpleQueue_get + 198
5 org.python.python 0x000000010be6b934 cfunction_vectorcall_FASTCALL_KEYWORDS + 132
6 org.python.python 0x000000010bf0558c call_function + 732
7 org.python.python 0x000000010bf02b4b _PyEval_EvalFrameDefault + 25371
8 org.python.python 0x000000010bf06283 _PyEval_EvalCode + 2611
9 org.python.python 0x000000010be2d8d1 _PyFunction_Vectorcall + 289
10 org.python.python 0x000000010bf031c3 _PyEval_EvalFrameDefault + 27027
11 org.python.python 0x000000010be2d948 function_code_fastcall + 104
12 org.python.python 0x000000010bf0558c call_function + 732
13 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
14 org.python.python 0x000000010be2d948 function_code_fastcall + 104
15 org.python.python 0x000000010bf0558c call_function + 732
16 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
17 org.python.python 0x000000010be2d948 function_code_fastcall + 104
18 org.python.python 0x000000010be2f9d2 method_vectorcall + 274
19 org.python.python 0x000000010bfaa3c6 t_bootstrap + 70
20 org.python.python 0x000000010bf5b8c9 pythread_wrapper + 25
21 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
22 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 26:
0 libsystem_kernel.dylib 0x00007fff711f8882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff712b9425 _pthread_cond_wait + 698
2 org.python.python 0x000000010bf5bc76 PyThread_acquire_lock_timed + 454
3 _queue.cpython-39-darwin.so 0x000000015046957e _queue_SimpleQueue_get_impl + 526
4 _queue.cpython-39-darwin.so 0x0000000150469126 _queue_SimpleQueue_get + 198
5 org.python.python 0x000000010be6b934 cfunction_vectorcall_FASTCALL_KEYWORDS + 132
6 org.python.python 0x000000010bf0558c call_function + 732
7 org.python.python 0x000000010bf02b4b _PyEval_EvalFrameDefault + 25371
8 org.python.python 0x000000010bf06283 _PyEval_EvalCode + 2611
9 org.python.python 0x000000010be2d8d1 _PyFunction_Vectorcall + 289
10 org.python.python 0x000000010bf031c3 _PyEval_EvalFrameDefault + 27027
11 org.python.python 0x000000010be2d948 function_code_fastcall + 104
12 org.python.python 0x000000010bf0558c call_function + 732
13 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
14 org.python.python 0x000000010be2d948 function_code_fastcall + 104
15 org.python.python 0x000000010bf0558c call_function + 732
16 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
17 org.python.python 0x000000010be2d948 function_code_fastcall + 104
18 org.python.python 0x000000010be2f9d2 method_vectorcall + 274
19 org.python.python 0x000000010bfaa3c6 t_bootstrap + 70
20 org.python.python 0x000000010bf5b8c9 pythread_wrapper + 25
21 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
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Thread 27:
0 libsystem_kernel.dylib 0x00007fff711f8882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff712b9425 _pthread_cond_wait + 698
2 org.python.python 0x000000010bf5bc76 PyThread_acquire_lock_timed + 454
3 _queue.cpython-39-darwin.so 0x000000015046957e _queue_SimpleQueue_get_impl + 526
4 _queue.cpython-39-darwin.so 0x0000000150469126 _queue_SimpleQueue_get + 198
5 org.python.python 0x000000010be6b934 cfunction_vectorcall_FASTCALL_KEYWORDS + 132
6 org.python.python 0x000000010bf0558c call_function + 732
7 org.python.python 0x000000010bf02b4b _PyEval_EvalFrameDefault + 25371
8 org.python.python 0x000000010bf06283 _PyEval_EvalCode + 2611
9 org.python.python 0x000000010be2d8d1 _PyFunction_Vectorcall + 289
10 org.python.python 0x000000010bf031c3 _PyEval_EvalFrameDefault + 27027
11 org.python.python 0x000000010be2d948 function_code_fastcall + 104
12 org.python.python 0x000000010bf0558c call_function + 732
13 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
14 org.python.python 0x000000010be2d948 function_code_fastcall + 104
15 org.python.python 0x000000010bf0558c call_function + 732
16 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
17 org.python.python 0x000000010be2d948 function_code_fastcall + 104
18 org.python.python 0x000000010be2f9d2 method_vectorcall + 274
19 org.python.python 0x000000010bfaa3c6 t_bootstrap + 70
20 org.python.python 0x000000010bf5b8c9 pythread_wrapper + 25
21 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
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Thread 28:
0 libsystem_kernel.dylib 0x00007fff711f8882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff712b9425 _pthread_cond_wait + 698
2 org.python.python 0x000000010bf5bc76 PyThread_acquire_lock_timed + 454
3 _queue.cpython-39-darwin.so 0x000000015046957e _queue_SimpleQueue_get_impl + 526
4 _queue.cpython-39-darwin.so 0x0000000150469126 _queue_SimpleQueue_get + 198
5 org.python.python 0x000000010be6b934 cfunction_vectorcall_FASTCALL_KEYWORDS + 132
6 org.python.python 0x000000010bf0558c call_function + 732
7 org.python.python 0x000000010bf02b4b _PyEval_EvalFrameDefault + 25371
8 org.python.python 0x000000010bf06283 _PyEval_EvalCode + 2611
9 org.python.python 0x000000010be2d8d1 _PyFunction_Vectorcall + 289
10 org.python.python 0x000000010bf031c3 _PyEval_EvalFrameDefault + 27027
11 org.python.python 0x000000010be2d948 function_code_fastcall + 104
12 org.python.python 0x000000010bf0558c call_function + 732
13 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
14 org.python.python 0x000000010be2d948 function_code_fastcall + 104
15 org.python.python 0x000000010bf0558c call_function + 732
16 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
17 org.python.python 0x000000010be2d948 function_code_fastcall + 104
18 org.python.python 0x000000010be2f9d2 method_vectorcall + 274
19 org.python.python 0x000000010bfaa3c6 t_bootstrap + 70
20 org.python.python 0x000000010bf5b8c9 pythread_wrapper + 25
21 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
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Thread 29:
0 libsystem_kernel.dylib 0x00007fff711f8882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff712b9425 _pthread_cond_wait + 698
2 org.python.python 0x000000010bf5bc76 PyThread_acquire_lock_timed + 454
3 _queue.cpython-39-darwin.so 0x000000015046957e _queue_SimpleQueue_get_impl + 526
4 _queue.cpython-39-darwin.so 0x0000000150469126 _queue_SimpleQueue_get + 198
5 org.python.python 0x000000010be6b934 cfunction_vectorcall_FASTCALL_KEYWORDS + 132
6 org.python.python 0x000000010bf0558c call_function + 732
7 org.python.python 0x000000010bf02b4b _PyEval_EvalFrameDefault + 25371
8 org.python.python 0x000000010bf06283 _PyEval_EvalCode + 2611
9 org.python.python 0x000000010be2d8d1 _PyFunction_Vectorcall + 289
10 org.python.python 0x000000010bf031c3 _PyEval_EvalFrameDefault + 27027
11 org.python.python 0x000000010be2d948 function_code_fastcall + 104
12 org.python.python 0x000000010bf0558c call_function + 732
13 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
14 org.python.python 0x000000010be2d948 function_code_fastcall + 104
15 org.python.python 0x000000010bf0558c call_function + 732
16 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
17 org.python.python 0x000000010be2d948 function_code_fastcall + 104
18 org.python.python 0x000000010be2f9d2 method_vectorcall + 274
19 org.python.python 0x000000010bfaa3c6 t_bootstrap + 70
20 org.python.python 0x000000010bf5b8c9 pythread_wrapper + 25
21 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
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Thread 30:
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1 select.cpython-39-darwin.so 0x0000000110857802 select_poll_poll + 482
2 org.python.python 0x000000010be3606f method_vectorcall_FASTCALL + 335
3 org.python.python 0x000000010bf0558c call_function + 732
4 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
5 org.python.python 0x000000010bf06283 _PyEval_EvalCode + 2611
6 org.python.python 0x000000010be2d8d1 _PyFunction_Vectorcall + 289
7 org.python.python 0x000000010bf0558c call_function + 732
8 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
9 org.python.python 0x000000010bf06283 _PyEval_EvalCode + 2611
10 org.python.python 0x000000010be2d8d1 _PyFunction_Vectorcall + 289
11 org.python.python 0x000000010bf0558c call_function + 732
12 org.python.python 0x000000010bf02be1 _PyEval_EvalFrameDefault + 25521
13 org.python.python 0x000000010bf06283 _PyEval_EvalCode + 2611
14 org.python.python 0x000000010be2d8d1 _PyFunction_Vectorcall + 289
15 org.python.python 0x000000010bf0558c call_function + 732
16 org.python.python 0x000000010bf02ab3 _PyEval_EvalFrameDefault + 25219
17 org.python.python 0x000000010be2d948 function_code_fastcall + 104
18 org.python.python 0x000000010be2fa79 method_vectorcall + 441
19 org.python.python 0x000000010bf031c3 _PyEval_EvalFrameDefault + 27027
20 org.python.python 0x000000010be2d948 function_code_fastcall + 104
21 org.python.python 0x000000010bf0558c call_function + 732
22 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
23 org.python.python 0x000000010be2d948 function_code_fastcall + 104
24 org.python.python 0x000000010bf0558c call_function + 732
25 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
26 org.python.python 0x000000010be2d948 function_code_fastcall + 104
27 org.python.python 0x000000010be2f9d2 method_vectorcall + 274
28 org.python.python 0x000000010bfaa3c6 t_bootstrap + 70
29 org.python.python 0x000000010bf5b8c9 pythread_wrapper + 25
30 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
31 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 31:
0 libsystem_kernel.dylib 0x00007fff711f8882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff712b9425 _pthread_cond_wait + 698
2 org.python.python 0x000000010bf5bc76 PyThread_acquire_lock_timed + 454
3 _queue.cpython-39-darwin.so 0x000000015046957e _queue_SimpleQueue_get_impl + 526
4 _queue.cpython-39-darwin.so 0x0000000150469126 _queue_SimpleQueue_get + 198
5 org.python.python 0x000000010be6b934 cfunction_vectorcall_FASTCALL_KEYWORDS + 132
6 org.python.python 0x000000010be49bba calliter_iternext + 74
7 org.python.python 0x000000010bf023fb _PyEval_EvalFrameDefault + 23499
8 org.python.python 0x000000010be2d948 function_code_fastcall + 104
9 org.python.python 0x000000010bf031c3 _PyEval_EvalFrameDefault + 27027
10 org.python.python 0x000000010be2d948 function_code_fastcall + 104
11 org.python.python 0x000000010bf0558c call_function + 732
12 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
13 org.python.python 0x000000010be2d948 function_code_fastcall + 104
14 org.python.python 0x000000010bf0558c call_function + 732
15 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
16 org.python.python 0x000000010be2d948 function_code_fastcall + 104
17 org.python.python 0x000000010be2f9d2 method_vectorcall + 274
18 org.python.python 0x000000010bfaa3c6 t_bootstrap + 70
19 org.python.python 0x000000010bf5b8c9 pythread_wrapper + 25
20 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
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Thread 32:
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1 libsystem_pthread.dylib 0x00007fff712b9425 _pthread_cond_wait + 698
2 org.python.python 0x000000010bf5bc76 PyThread_acquire_lock_timed + 454
3 _queue.cpython-39-darwin.so 0x000000015046957e _queue_SimpleQueue_get_impl + 526
4 _queue.cpython-39-darwin.so 0x0000000150469126 _queue_SimpleQueue_get + 198
5 org.python.python 0x000000010be6b934 cfunction_vectorcall_FASTCALL_KEYWORDS + 132
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7 org.python.python 0x000000010bf02b4b _PyEval_EvalFrameDefault + 25371
8 org.python.python 0x000000010be2d948 function_code_fastcall + 104
9 org.python.python 0x000000010bf031c3 _PyEval_EvalFrameDefault + 27027
10 org.python.python 0x000000010be2d948 function_code_fastcall + 104
11 org.python.python 0x000000010bf0558c call_function + 732
12 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
13 org.python.python 0x000000010be2d948 function_code_fastcall + 104
14 org.python.python 0x000000010bf0558c call_function + 732
15 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
16 org.python.python 0x000000010be2d948 function_code_fastcall + 104
17 org.python.python 0x000000010be2f9d2 method_vectorcall + 274
18 org.python.python 0x000000010bfaa3c6 t_bootstrap + 70
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20 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
21 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 33:
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1 libsystem_pthread.dylib 0x00007fff712b9425 _pthread_cond_wait + 698
2 libopenblas.0.dylib 0x0000000152cc42eb blas_thread_server + 619
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Thread 34:
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1 libsystem_pthread.dylib 0x00007fff712b9425 _pthread_cond_wait + 698
2 libopenblas.0.dylib 0x0000000152cc42eb blas_thread_server + 619
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Thread 35:
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1 libsystem_pthread.dylib 0x00007fff712b9425 _pthread_cond_wait + 698
2 libopenblas.0.dylib 0x0000000152cc42eb blas_thread_server + 619
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Thread 36:
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1 libsystem_pthread.dylib 0x00007fff712b9425 _pthread_cond_wait + 698
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Thread 37:
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1 libsystem_pthread.dylib 0x00007fff712b9425 _pthread_cond_wait + 698
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Thread 38:
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1 libsystem_pthread.dylib 0x00007fff712b9425 _pthread_cond_wait + 698
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Thread 39:
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1 libsystem_pthread.dylib 0x00007fff712b9425 _pthread_cond_wait + 698
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Thread 40:: com.apple.NSEventThread
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Thread 41:: ThreadPoolSingleThreadSharedBackgroundBlocking1
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2 QtWebEngineCore 0x0000000127946492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001279462cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001278ee76a base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 42
5 QtWebEngineCore 0x00000001278eee3d base::internal::WorkerThread::RunWorker() + 237
6 QtWebEngineCore 0x00000001278eec74 base::internal::WorkerThread::RunBackgroundSharedWorker() + 20
7 QtWebEngineCore 0x0000000127941e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 42:
0 libsystem_kernel.dylib 0x00007fff711f8882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff712b9425 _pthread_cond_wait + 698
2 libopenblas.0.dylib 0x000000010cacea9f blas_thread_server + 207
3 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 43:
0 libsystem_kernel.dylib 0x00007fff711f8882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff712b9425 _pthread_cond_wait + 698
2 libopenblas.0.dylib 0x000000010cacea9f blas_thread_server + 207
3 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 44:
0 libsystem_kernel.dylib 0x00007fff711f8882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff712b9425 _pthread_cond_wait + 698
2 libopenblas.0.dylib 0x000000010cacea9f blas_thread_server + 207
3 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 45:
0 libsystem_kernel.dylib 0x00007fff711f8882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff712b9425 _pthread_cond_wait + 698
2 libopenblas.0.dylib 0x000000010cacea9f blas_thread_server + 207
3 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 46:
0 libsystem_kernel.dylib 0x00007fff711f8882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff712b9425 _pthread_cond_wait + 698
2 libopenblas.0.dylib 0x000000010cacea9f blas_thread_server + 207
3 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 47:
0 libsystem_kernel.dylib 0x00007fff711f8882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff712b9425 _pthread_cond_wait + 698
2 libopenblas.0.dylib 0x000000010cacea9f blas_thread_server + 207
3 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 48:
0 libsystem_kernel.dylib 0x00007fff711f8882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff712b9425 _pthread_cond_wait + 698
2 libopenblas.0.dylib 0x000000010cacea9f blas_thread_server + 207
3 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 49:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff711f5dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff711f6170 mach_msg + 60
2 QtWebEngineCore 0x0000000127946492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001278ee778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x00000001278ef150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x00000001278eecd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x0000000127941e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 50:
0 libsystem_pthread.dylib 0x00007fff712b4b68 start_wqthread + 0
Thread 51:
0 libsystem_pthread.dylib 0x00007fff712b4b68 start_wqthread + 0
Thread 52:
0 libsystem_pthread.dylib 0x00007fff712b4b68 start_wqthread + 0
Thread 53:
0 libsystem_pthread.dylib 0x00007fff712b4b68 start_wqthread + 0
Thread 54:
0 libsystem_pthread.dylib 0x00007fff712b4b68 start_wqthread + 0
Thread 55:
0 libsystem_pthread.dylib 0x00007fff712b4b68 start_wqthread + 0
Thread 56:
0 libsystem_pthread.dylib 0x00007fff712b4b68 start_wqthread + 0
Thread 57:
0 libsystem_pthread.dylib 0x00007fff712b4b68 start_wqthread + 0
Thread 58:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff711f5dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff711f6170 mach_msg + 60
2 QtWebEngineCore 0x0000000127946492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001278ee778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x00000001278eee3d base::internal::WorkerThread::RunWorker() + 237
5 QtWebEngineCore 0x00000001278eecd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x0000000127941e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 59:
0 libsystem_kernel.dylib 0x00007fff711f8882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff712b9425 _pthread_cond_wait + 698
2 org.python.python 0x000000010bf5bd6c PyThread_acquire_lock_timed + 700
3 org.python.python 0x000000010bfaaa1f acquire_timed + 111
4 org.python.python 0x000000010bfaab30 lock_PyThread_acquire_lock + 48
5 org.python.python 0x000000010be35e54 method_vectorcall_VARARGS_KEYWORDS + 388
6 org.python.python 0x000000010bf0558c call_function + 732
7 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
8 org.python.python 0x000000010bf06283 _PyEval_EvalCode + 2611
9 org.python.python 0x000000010be2d8d1 _PyFunction_Vectorcall + 289
10 org.python.python 0x000000010bf0558c call_function + 732
11 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
12 org.python.python 0x000000010bf06283 _PyEval_EvalCode + 2611
13 org.python.python 0x000000010be2d8d1 _PyFunction_Vectorcall + 289
14 org.python.python 0x000000010bf0558c call_function + 732
15 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
16 org.python.python 0x000000010be2d948 function_code_fastcall + 104
17 org.python.python 0x000000010bf0558c call_function + 732
18 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
19 org.python.python 0x000000010be2d948 function_code_fastcall + 104
20 org.python.python 0x000000010bf0558c call_function + 732
21 org.python.python 0x000000010bf02a92 _PyEval_EvalFrameDefault + 25186
22 org.python.python 0x000000010be2d948 function_code_fastcall + 104
23 org.python.python 0x000000010be2f9d2 method_vectorcall + 274
24 org.python.python 0x000000010bfaa3c6 t_bootstrap + 70
25 org.python.python 0x000000010bf5b8c9 pythread_wrapper + 25
26 libsystem_pthread.dylib 0x00007fff712b9109 _pthread_start + 148
27 libsystem_pthread.dylib 0x00007fff712b4b8b thread_start + 15
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x000000011165fdc0 rcx: 0x00007fe418047a58 rdx: 0x0000000000000000
rdi: 0x0000000000000307 rsi: 0x000000000000000b rbp: 0x00007fe418047a80 rsp: 0x00007fe418047a58
r8: 0x00007fe418047f48 r9: 0x8a2f902ab8232aec r10: 0x000000011165fdc0 r11: 0x0000000000000246
r12: 0x0000000000000307 r13: 0x0000600002513540 r14: 0x000000000000000b r15: 0x0000000000000016
rip: 0x00007fff711fc33a rfl: 0x0000000000000246 cr2: 0x00007fe418046f00
Logical CPU: 0
Error Code: 0x02000148
Trap Number: 133
Binary Images:
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0x10c796000 - 0x1103486ef +libopenblas.0.dylib (0) /Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/numpy/.dylibs/libopenblas.0.dylib
0x1105e6000 - 0x1106fdff7 +libgfortran.3.dylib (0) /Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/numpy/.dylibs/libgfortran.3.dylib
0x11076b000 - 0x1107a1fff +libquadmath.0.dylib (0) /Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/numpy/.dylibs/libquadmath.0.dylib
0x1107b5000 - 0x1107caff7 +libgcc_s.1.dylib (0) /Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/numpy/.dylibs/libgcc_s.1.dylib
0x1107da000 - 0x1107e9fff +_datetime.cpython-39-darwin.so (0) /Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/lib-dynload/_datetime.cpython-39-darwin.so
0x1107fa000 - 0x110811fff +_pickle.cpython-39-darwin.so (0) /Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/lib-dynload/_pickle.cpython-39-darwin.so
0x110822000 - 0x110831ff3 +_multiarray_tests.cpython-39-darwin.so (0) /Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/numpy/core/_multiarray_tests.cpython-39-darwin.so
0x11084a000 - 0x11084cfff +_posixsubprocess.cpython-39-darwin.so (0) /Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/lib-dynload/_posixsubprocess.cpython-39-darwin.so
0x110855000 - 0x110859ff7 +select.cpython-39-darwin.so (0) /Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/lib-dynload/select.cpython-39-darwin.so
0x110863000 - 0x110874ff7 +_ctypes.cpython-39-darwin.so (0) /Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/lib-dynload/_ctypes.cpython-39-darwin.so
0x11088b000 - 0x11088effb +lapack_lite.cpython-39-darwin.so (0) /Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/numpy/linalg/lapack_lite.cpython-39-darwin.so
0x11089b000 - 0x1108b6ff3 +_umath_linalg.cpython-39-darwin.so (0) /Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/numpy/linalg/_umath_linalg.cpython-39-darwin.so
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0x1109c4000 - 0x1109e3fff +bit_generator.cpython-39-darwin.so (0) /Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/numpy/random/bit_generator.cpython-39-darwin.so
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0x110a6b000 - 0x110ac3fff +libssl.1.1.dylib (0) /Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/libssl.1.1.dylib
0x110af2000 - 0x110d08f4f +libcrypto.1.1.dylib (0) /Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/libcrypto.1.1.dylib
0x110da6000 - 0x110dacff7 +_blake2.cpython-39-darwin.so (0) /Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/lib-dynload/_blake2.cpython-39-darwin.so
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0x110e5b000 - 0x110e6aff7 +_philox.cpython-39-darwin.so (0) /Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/numpy/random/_philox.cpython-39-darwin.so
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0x110eb7000 - 0x110f42fff +_generator.cpython-39-darwin.so (0) /Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/numpy/random/_generator.cpython-39-darwin.so
0x110fad000 - 0x110fadfff +_opcode.cpython-39-darwin.so (0) /Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/lib-dynload/_opcode.cpython-39-darwin.so
0x110fb5000 - 0x110fb5fff +_arrays.cpython-39-darwin.so (0) /Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/arrays/_arrays.cpython-39-darwin.so
0x110fbc000 - 0x11105dff7 +libarrays.dylib (0) /Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/arrays/lib/libarrays.dylib
0x111081000 - 0x11109fff3 +_geometry.cpython-39-darwin.so (0) /Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/geometry/_geometry.cpython-39-darwin.so
0x1110b4000 - 0x111213ff7 +QtCore.abi3.so (0) /Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/PyQt5/QtCore.abi3.so
0x1113f1000 - 0x111408ff7 +sip.cpython-39-darwin.so (0) /Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/PyQt5/sip.cpython-39-darwin.so
0x11141f000 - 0x111440fff +QtWebEngineWidgets.abi3.so (0) /Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/PyQt5/QtWebEngineWidgets.abi3.so
0x111472000 - 0x111495ff7 +QtWebEngineWidgets (0) /Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/PyQt5/Qt/lib/QtWebEngineWidgets.framework/Versions/5/QtWebEngineWidgets
0x1114cd000 - 0x1114f8ff7 +QtPrintSupport (0) /Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/PyQt5/Qt/lib/QtPrintSupport.framework/Versions/5/QtPrintSupport
0x111526000 - 0x11153fff3 +QtWebChannel (0) /Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/PyQt5/Qt/lib/QtWebChannel.framework/Versions/5/QtWebChannel
0x111556000 - 0x111562ffb +QtQuickWidgets (0) /Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/PyQt5/Qt/lib/QtQuickWidgets.framework/Versions/5/QtQuickWidgets
0x111575000 - 0x11157aff7 +QtWebChannel.abi3.so (0) /Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/PyQt5/QtWebChannel.abi3.so
0x111594000 - 0x111626267 dyld (750.7) /usr/lib/dyld
0x12169a000 - 0x121c0a7df +QtCore (0) /Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/PyQt5/Qt/lib/QtCore.framework/Versions/5/QtCore
0x1238a8000 - 0x123b38ff7 +QtWidgets.abi3.so (0) /Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/PyQt5/QtWidgets.abi3.so
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0x7fff6ed20000 - 0x7fff6ed85ff7 libcurl.4.dylib (118.120.6) /usr/lib/libcurl.4.dylib
0x7fff6ee28000 - 0x7fff6ee28fff libenergytrace.dylib (21) /usr/lib/libenergytrace.dylib
0x7fff6ee29000 - 0x7fff6ee43ff7 libexpat.1.dylib (19.60.3) /usr/lib/libexpat.1.dylib
0x7fff6ee44000 - 0x7fff6ee50ffb libexslt.0.dylib (16.12) /usr/lib/libexslt.0.dylib
0x7fff6ee51000 - 0x7fff6ee53fff libfakelink.dylib (149.1) /usr/lib/libfakelink.dylib
0x7fff6ee54000 - 0x7fff6ee59f57 libffi.dylib (26) /usr/lib/libffi.dylib
0x7fff6ee62000 - 0x7fff6ee67fff libgermantok.dylib (24) /usr/lib/libgermantok.dylib
0x7fff6ee68000 - 0x7fff6ee71ff7 libheimdal-asn1.dylib (564.140.7) /usr/lib/libheimdal-asn1.dylib
0x7fff6ee72000 - 0x7fff6ef62fff libiconv.2.dylib (59) /usr/lib/libiconv.2.dylib
0x7fff6ef63000 - 0x7fff6f1bafff libicucore.A.dylib (64260.0.1) /usr/lib/libicucore.A.dylib
0x7fff6f1d4000 - 0x7fff6f1d5fff liblangid.dylib (133) /usr/lib/liblangid.dylib
0x7fff6f1d6000 - 0x7fff6f1eeff3 liblzma.5.dylib (16) /usr/lib/liblzma.5.dylib
0x7fff6f206000 - 0x7fff6f2adff7 libmecab.dylib (883.11) /usr/lib/libmecab.dylib
0x7fff6f2ae000 - 0x7fff6f510ff1 libmecabra.dylib (883.11) /usr/lib/libmecabra.dylib
0x7fff6f87d000 - 0x7fff6f8acfff libncurses.5.4.dylib (57) /usr/lib/libncurses.5.4.dylib
0x7fff6f9dc000 - 0x7fff6fe58ff5 libnetwork.dylib (1880.120.4) /usr/lib/libnetwork.dylib
0x7fff6fe59000 - 0x7fff6fe70fff libnetworkextension.dylib (1095.140.2) /usr/lib/libnetworkextension.dylib
0x7fff6fef9000 - 0x7fff6ff2cfde libobjc.A.dylib (787.1) /usr/lib/libobjc.A.dylib
0x7fff6ff2d000 - 0x7fff6ff2eff7 libodfde.dylib (26) /usr/lib/libodfde.dylib
0x7fff6ff3f000 - 0x7fff6ff43fff libpam.2.dylib (25.100.1) /usr/lib/libpam.2.dylib
0x7fff6ff46000 - 0x7fff6ff7cfff libpcap.A.dylib (89.120.2) /usr/lib/libpcap.A.dylib
0x7fff6ffbc000 - 0x7fff6ffcaff9 libperfcheck.dylib (37.100.2) /usr/lib/libperfcheck.dylib
0x7fff6ffcb000 - 0x7fff6ffceff3 libpmenergy.dylib (214.120.2) /usr/lib/libpmenergy.dylib
0x7fff6ffcf000 - 0x7fff6ffd1fff libpmsample.dylib (214.120.2) /usr/lib/libpmsample.dylib
0x7fff70000000 - 0x7fff70018fff libresolv.9.dylib (67.40.1) /usr/lib/libresolv.9.dylib
0x7fff7001a000 - 0x7fff7005eff7 libsandbox.1.dylib (1217.141.7) /usr/lib/libsandbox.1.dylib
0x7fff7005f000 - 0x7fff70071ff7 libsasl2.2.dylib (213.120.1) /usr/lib/libsasl2.2.dylib
0x7fff70072000 - 0x7fff70073ff7 libspindump.dylib (281.3) /usr/lib/libspindump.dylib
0x7fff70074000 - 0x7fff7025eff7 libsqlite3.dylib (308.6) /usr/lib/libsqlite3.dylib
0x7fff70352000 - 0x7fff7037fffb libssl.46.dylib (47.140.2) /usr/lib/libssl.46.dylib
0x7fff70454000 - 0x7fff704aeff8 libusrtcp.dylib (1880.120.4) /usr/lib/libusrtcp.dylib
0x7fff704af000 - 0x7fff704b2ffb libutil.dylib (57) /usr/lib/libutil.dylib
0x7fff704b3000 - 0x7fff704c0ff7 libxar.1.dylib (425.5) /usr/lib/libxar.1.dylib
0x7fff704c6000 - 0x7fff705a8fff libxml2.2.dylib (33.9) /usr/lib/libxml2.2.dylib
0x7fff705ac000 - 0x7fff705d4fff libxslt.1.dylib (16.12) /usr/lib/libxslt.1.dylib
0x7fff705d5000 - 0x7fff705e7ff3 libz.1.dylib (76) /usr/lib/libz.1.dylib
0x7fff70e96000 - 0x7fff70e9bff3 libcache.dylib (83) /usr/lib/system/libcache.dylib
0x7fff70e9c000 - 0x7fff70ea7fff libcommonCrypto.dylib (60165.120.1) /usr/lib/system/libcommonCrypto.dylib
0x7fff70ea8000 - 0x7fff70eaffff libcompiler_rt.dylib (101.2) /usr/lib/system/libcompiler_rt.dylib
0x7fff70eb0000 - 0x7fff70eb9ff7 libcopyfile.dylib (166.40.1) /usr/lib/system/libcopyfile.dylib
0x7fff70eba000 - 0x7fff70f4cfdb libcorecrypto.dylib (866.140.2) /usr/lib/system/libcorecrypto.dylib
0x7fff71059000 - 0x7fff71099ff0 libdispatch.dylib (1173.100.2) /usr/lib/system/libdispatch.dylib
0x7fff7109a000 - 0x7fff710d0fff libdyld.dylib (750.7) /usr/lib/system/libdyld.dylib
0x7fff710d1000 - 0x7fff710d1ffb libkeymgr.dylib (30) /usr/lib/system/libkeymgr.dylib
0x7fff710d2000 - 0x7fff710deff3 libkxld.dylib (6153.141.50) /usr/lib/system/libkxld.dylib
0x7fff710df000 - 0x7fff710dfff7 liblaunch.dylib (1738.140.3) /usr/lib/system/liblaunch.dylib
0x7fff710e0000 - 0x7fff710e5ff7 libmacho.dylib (959.0.1) /usr/lib/system/libmacho.dylib
0x7fff710e6000 - 0x7fff710e8ff3 libquarantine.dylib (110.40.5) /usr/lib/system/libquarantine.dylib
0x7fff710e9000 - 0x7fff710eaff7 libremovefile.dylib (48) /usr/lib/system/libremovefile.dylib
0x7fff710eb000 - 0x7fff71102ff3 libsystem_asl.dylib (377.60.3) /usr/lib/system/libsystem_asl.dylib
0x7fff71103000 - 0x7fff71103ff7 libsystem_blocks.dylib (74) /usr/lib/system/libsystem_blocks.dylib
0x7fff71104000 - 0x7fff7118bfff libsystem_c.dylib (1353.100.4) /usr/lib/system/libsystem_c.dylib
0x7fff7118c000 - 0x7fff7118fffb libsystem_configuration.dylib (1061.141.2) /usr/lib/system/libsystem_configuration.dylib
0x7fff71190000 - 0x7fff71193fff libsystem_coreservices.dylib (114.1) /usr/lib/system/libsystem_coreservices.dylib
0x7fff71194000 - 0x7fff7119cfff libsystem_darwin.dylib (1353.100.4) /usr/lib/system/libsystem_darwin.dylib
0x7fff7119d000 - 0x7fff711a4fff libsystem_dnssd.dylib (1096.100.3) /usr/lib/system/libsystem_dnssd.dylib
0x7fff711a5000 - 0x7fff711a6ffb libsystem_featureflags.dylib (17) /usr/lib/system/libsystem_featureflags.dylib
0x7fff711a7000 - 0x7fff711f4ff7 libsystem_info.dylib (538) /usr/lib/system/libsystem_info.dylib
0x7fff711f5000 - 0x7fff71221ff7 libsystem_kernel.dylib (6153.141.50) /usr/lib/system/libsystem_kernel.dylib
0x7fff71222000 - 0x7fff71269fff libsystem_m.dylib (3178) /usr/lib/system/libsystem_m.dylib
0x7fff7126a000 - 0x7fff71291fff libsystem_malloc.dylib (283.100.6) /usr/lib/system/libsystem_malloc.dylib
0x7fff71292000 - 0x7fff7129fffb libsystem_networkextension.dylib (1095.140.2) /usr/lib/system/libsystem_networkextension.dylib
0x7fff712a0000 - 0x7fff712a9ff7 libsystem_notify.dylib (241.100.2) /usr/lib/system/libsystem_notify.dylib
0x7fff712aa000 - 0x7fff712b2fef libsystem_platform.dylib (220.100.1) /usr/lib/system/libsystem_platform.dylib
0x7fff712b3000 - 0x7fff712bdfff libsystem_pthread.dylib (416.100.3) /usr/lib/system/libsystem_pthread.dylib
0x7fff712be000 - 0x7fff712c2ff3 libsystem_sandbox.dylib (1217.141.7) /usr/lib/system/libsystem_sandbox.dylib
0x7fff712c3000 - 0x7fff712c5fff libsystem_secinit.dylib (62.100.2) /usr/lib/system/libsystem_secinit.dylib
0x7fff712c6000 - 0x7fff712cdffb libsystem_symptoms.dylib (1238.120.2) /usr/lib/system/libsystem_symptoms.dylib
0x7fff712ce000 - 0x7fff712e4ff2 libsystem_trace.dylib (1147.120.1) /usr/lib/system/libsystem_trace.dylib
0x7fff712e6000 - 0x7fff712ebff7 libunwind.dylib (35.4) /usr/lib/system/libunwind.dylib
0x7fff712ec000 - 0x7fff71321ffe libxpc.dylib (1738.140.3) /usr/lib/system/libxpc.dylib
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 55823
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 24668467
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=1.1G resident=0K(0%) swapped_out_or_unallocated=1.1G(100%)
Writable regions: Total=13.3G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=13.3G(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 768K 6
Activity Tracing 256K 1
CG backing stores 2096K 4
CG image 572K 42
CoreAnimation 4724K 84
CoreGraphics 8K 1
CoreImage 48K 6
CoreUI image data 4140K 36
Foundation 28K 2
Kernel Alloc Once 8K 1
MALLOC 10.8G 686
MALLOC guard page 48K 10
MALLOC_MEDIUM (reserved) 1.3G 16 reserved VM address space (unallocated)
MALLOC_NANO (reserved) 256.0M 1 reserved VM address space (unallocated)
Mach message 24K 4
OpenGL GLSL 384K 5
STACK GUARD 236K 59
Stack 468.0M 60
Stack Guard 56.0M 1
VM_ALLOCATE 207.8M 288
VM_ALLOCATE (reserved) 352.0M 2 reserved VM address space (unallocated)
__DATA 66.4M 651
__DATA_CONST 136K 7
__FONT_DATA 4K 1
__GLSLBUILTINS 5176K 1
__LINKEDIT 494.8M 218
__OBJC_RO 32.3M 1
__OBJC_RW 1908K 2
__TEXT 643.5M 591
__UNICODE 564K 1
mapped file 425.5M 95
shared memory 2992K 34
=========== ======= =======
TOTAL 15.0G 2917
TOTAL, minus reserved VM space 13.1G 2917
===== Log before crash start =====
> isolde shorthand
Initialising ISOLDE-specific command aliases:
Alias Equivalent full command
-------------------------------------------------
st isolde step {arguments}
aw isolde add water {arguments}
awsf isolde add water {arguments} sim false
al isolde add ligand {arguments}
aa isolde add aa $1 sel {arguments}
ht isolde mod his sel {arguments}
so setattr sel atoms occupancy {arguments}
ab isolde adjust bfactors {arguments}
ss isolde sim start sel
rt isolde release torsions sel {arguments}
rd isolde release distances sel {arguments}
ra rd; rt
pf isolde pepflip sel
cf isolde cisflip sel
cbb color bfactor {arguments}
cbo color byattr occupancy {arguments}
cbc color {arguments} bychain; color {arguments} byhet
cs clipper set contourSensitivity {arguments}
UCSF ChimeraX version: 1.3 (2021-12-08)
© 2016-2021 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open /Volumes/EM11600_2/DATA/jabrilg/20220405_33_hPIC-
> AdML18W_1_Fr16/processing/Frankenmaps/PIC-NCP-
> CAK_comp/composite/composite_half1.mrc
Opened composite_half1.mrc as #1, grid size 400,400,400, pixel 1.05, shown at
level 0.00929, step 2, values float32
> volume #1 step 1
> volume #1 level 0.006359
> volume #1 level 0.005137
> volume #1 level 0.01247
> volume #1 level 0.01076
> volume #1 level 0.00868
> open /Volumes/EM11600_2/DATA/jabrilg/20220405_33_hPIC-
> AdML18W_1_Fr16/processing/Relion/MaskCreate/job349/mask.mrc
Opened mask.mrc as #2, grid size 400,400,400, pixel 1.05, shown at level 1,
step 2, values float32
> volume #2 step 1
> volume #2 level 1
> volume #2 level 0.9533
> volume #2 level 1
> volume #2 level 0.2513
> open /Volumes/EM11600_2/DATA/jabrilg/20220405_33_hPIC-
> AdML18W_1_Fr16/processing/Relion/LocalRes/job641/relion_locres_filtered.mrc
Opened relion_locres_filtered.mrc as #3, grid size 400,400,400, pixel 1.05,
shown at level 0.0181, step 2, values float32
> hide #!2 models
> hide #!1 models
> volume #3 step 1
> volume #3 level 0.01452
> volume #3 level 0.02931
> volume #3 level 0.01715
> hide #!3 models
> open "/Users/jabrilg/Desktop/Lab meetings/Lab meeting
> 6/Images/Scripting/PIC-NCP_plusRPB6-plusCAK_REFINED.pdb"
Chain information for PIC-NCP_plusRPB6-plusCAK_REFINED.pdb #4
---
Chain | Description
0 | No description available
1 | No description available
2 | No description available
3 | No description available
4 | No description available
5 | No description available
6 | No description available
7 | No description available
8 | No description available
9 | No description available
A | No description available
B | No description available
C | No description available
D | No description available
E | No description available
F | No description available
G | No description available
H | No description available
I | No description available
J | No description available
K | No description available
L | No description available
M | No description available
N | No description available
O | No description available
Q | No description available
R | No description available
T | No description available
U | No description available
V | No description available
W | No description available
X | No description available
a | No description available
b f | No description available
c | No description available
d | No description available
e | No description available
g | No description available
h | No description available
> show cartoons
> hide atoms
> dssp
> close #4
> open /Users/jabrilg/Desktop/10W_processing/Ref/j29/run_ct22_class001.mrc
Opened run_ct22_class001.mrc as #4, grid size 400,400,400, pixel 1.05, shown
at level 0.0167, step 2, values float32
> volume #4 step 1
> volume #4 level 0.008012
> volume #4 level 0.00496
> volume #4 level 0.003193
> volume #4 level 0.007369
> volume #4 level 0.003996
> open /Users/jabrilg/Desktop/10W_processing/CAK_gauss_mask-j29.mrc
Opened CAK_gauss_mask-j29.mrc as #5, grid size 400,400,400, pixel 1.05, shown
at level 1, step 2, values float32
> volume #5 level 0.9982
> volume #5 color #ffb2ff69
> volume #5 color #ffb2ff68
> close #4-5
> open /Users/jabrilg/Desktop/18W_processing/Ref/j364/PIC-NCP-
> CAK_comp/composite/PIC-NCP-CAK_lres_comp_sharpened_map.ccp4
Opened PIC-NCP-CAK_lres_comp_sharpened_map.ccp4 as #4, grid size 400,400,400,
pixel 1.05, shown at level 4.29, step 2, values float32
> volume #4 step 1
> volume #4 level 6.471
> volume #4 level 3.258
> volume #4 level 3.643
> open /Volumes/EM11600/DATA/jabrilg/maps_Julio_PIC-NCP_18W/Modelling/PIC-NCP-
> CAK/PIC-NCP-CAK_lres_comp_sharpened_map.ccp4
Opened PIC-NCP-CAK_lres_comp_sharpened_map.ccp4 as #5, grid size 400,400,400,
pixel 1.05, shown at level 4.29, step 2, values float32
> hide #!4 models
> volume #5 step 1
> volume #5 level 3.386
> volume #5 level 5.443
> volume #5 level 4.286
> volume #5 level 3.9
> close #5
> show #!4 models
> open /Users/jabrilg/Desktop/18W_processing/Ref/j364/PIC-NCP-
> CAK_comp/composite/composite_half1.mrc
Opened composite_half1.mrc as #5, grid size 400,400,400, pixel 1.05, shown at
level 0.00929, step 2, values float32
> volume #5 step 1
> volume #5 level 0.008285
> volume #5 level 0.008033
> volume #4 level 2.487
> volume #5 level 0.007027
> close #1-5
> open /Volumes/EM11600/DATA/jabrilg/maps_Julio_PIC-NCP_18W/Modelling/PIC-NCP-
> CAK/PIC-NCP-CAK_lres_comp_sharpened_map.ccp4
Opened PIC-NCP-CAK_lres_comp_sharpened_map.ccp4 as #1, grid size 400,400,400,
pixel 1.05, shown at level 4.29, step 2, values float32
> open /Volumes/EM11600/DATA/jabrilg/maps_Julio_PIC-NCP_18W/Modelling/PIC-NCP-
> CAK/j364_PIC-NCP-CAK_lres-sharpened_map.ccp4
Opened j364_PIC-NCP-CAK_lres-sharpened_map.ccp4 as #2, grid size 400,400,400,
pixel 1.05, shown at level 4.44, step 2, values float32
> open /Volumes/EM11600/DATA/jabrilg/maps_Julio_PIC-NCP_18W/Refinements/PIC-
> NCP-CAK_ref/6cycles/PIC-NCP18W_refined-final.pdb
Chain information for PIC-NCP18W_refined-final.pdb #3
---
Chain | Description
0 | No description available
1 | No description available
2 | No description available
3 | No description available
4 | No description available
5 | No description available
6 | No description available
7 | No description available
8 | No description available
9 | No description available
A | No description available
B | No description available
C | No description available
D | No description available
E | No description available
F | No description available
G | No description available
H | No description available
I | No description available
J | No description available
K | No description available
L | No description available
M | No description available
N | No description available
O | No description available
Q | No description available
R | No description available
T | No description available
U | No description available
V | No description available
W | No description available
X | No description available
Y | No description available
Z | No description available
a | No description available
b | No description available
c | No description available
d | No description available
e | No description available
f | No description available
g | No description available
h | No description available
> show cartoons
> hide atoms
> dssp
> volume #1 step 1
> volume #1 level 3.287
> volume #2 step 1
> volume #2 level 1.931
> volume #1 level 3.162
> volume #2 level 1.248
> volume #2 level 1.59
> volume #2 level 1.704
> volume #2 level 1.248
> volume #2 level 1.59
> volume #2 level 2.045
> open /Volumes/EM11600/DATA/jabrilg/20210727_27_hPIC-
> AdML10W_2/processing/Relion/LocalRes/job906/relion_locres_filtered.mrc
Opened relion_locres_filtered.mrc as #4, grid size 200,200,200, pixel 1.05,
shown at level 0.0262, step 1, values float32
> open /Volumes/EM11600/DATA/jabrilg/20210727_27_hPIC-
> AdML10W_2/processing/Relion/LocalRes/job907/relion_locres_filtered.mrc
Opened relion_locres_filtered.mrc as #5, grid size 200,200,200, pixel 1.05,
shown at level 0.0307, step 1, values float32
> hide #!4 models
> hide #!3 models
> hide #!2 models
> show #!4 models
> hide #!5 models
> volume #4 level 0.01807
> show #!5 models
> hide #!4 models
> volume #5 level 0.01959
> open "/Users/jabrilg/Desktop/PhD projects/Papers/hPIC-NCP/Images for
> figures/chimera_lres.cxs"
Opened run_class001.mrc as #10, grid size 400,400,400, pixel 1.05, shown at
level 0.00637, step 1, values float32
Opened run_class001.mrc as #12, grid size 400,400,400, pixel 1.05, shown at
level 0.00654, step 1, values float32
Opened Gauss_Mask.mrc as #11, grid size 400,400,400, pixel 1.05, shown at
level 0.791, step 1, values float32
Opened run_it060_class001.mrc copy as #7, grid size 400,400,400, pixel 1.05,
shown at level 0.0095, step 1, values float32
Opened run_it060_class002.mrc copy as #13, grid size 400,400,400, pixel 1.05,
shown at level 0.0095, step 1, values float32
Opened run_it060_class003.mrc copy as #14, grid size 400,400,400, pixel 1.05,
shown at level 0.0095, step 1, values float32
Opened run_it060_class004.mrc copy as #15, grid size 400,400,400, pixel 1.05,
shown at level 0.0095, step 1, values float32
Opened run_it060_class001.mrc copy as #19, grid size 400,400,400, pixel 1.05,
shown at level 0.0095, step 1, values float32
Opened run_it060_class002.mrc copy as #20, grid size 400,400,400, pixel 1.05,
shown at level 0.0095, step 1, values float32
Opened run_it060_class003.mrc copy as #21, grid size 400,400,400, pixel 1.05,
shown at level 0.0095, step 1, values float32
Opened run_it060_class001.mrc as #2, grid size 400,400,400, pixel 1.05, shown
at level 0.01, step 1, values float32
Opened run_it060_class003.mrc as #4, grid size 400,400,400, pixel 1.05, shown
at level 0.01, step 1, values float32
Opened run_it060_class001.mrc as #3, grid size 400,400,400, pixel 1.05, shown
at level 0.008, step 1, values float32
Opened run_it060_class002.mrc as #5, grid size 400,400,400, pixel 1.05, shown
at level 0.008, step 1, values float32
Opened run_it060_class003.mrc as #16, grid size 400,400,400, pixel 1.05, shown
at level 0.008, step 1, values float32
Opened run_it060_class004.mrc as #17, grid size 400,400,400, pixel 1.05, shown
at level 0.008, step 1, values float32
Opened run_it060_class001.mrc as #18, grid size 400,400,400, pixel 1.05, shown
at level 0.012, step 1, values float32
Opened run_it060_class002.mrc as #22, grid size 400,400,400, pixel 1.05, shown
at level 0.012, step 1, values float32
Opened run_it060_class003.mrc as #23, grid size 400,400,400, pixel 1.05, shown
at level 0.012, step 1, values float32
Opened run_it060_class004.mrc as #24, grid size 400,400,400, pixel 1.05, shown
at level 0.012, step 1, values float32
Opened postprocess.mrc as #25, grid size 250,250,250, pixel 1.05, shown at
level 0.015, step 1, values float32
Opened run_class001.mrc as #26, grid size 400,400,400, pixel 1.05, shown at
level 0.0083, step 1, values float32
Opened j662_cPIC_rec_lres_sharpened_map.ccp4 copy as #28, grid size
300,300,300, pixel 1.05, shown at level 3.5, step 1, values float32
Opened postprocess_masked.mrc as #27, grid size 200,200,200, pixel 1.05, shown
at level 0.021, step 1, values float32
Opened NCP_postprocess.mrc as #29, grid size 200,200,200, pixel 1.05, shown at
level 0.025, step 1, values float32
Opened j665_cPIC-high_rec_lres_sharpened_map.ccp4 copy as #31, grid size
300,300,300, pixel 1.05, shown at level 2.8, step 1, values float32
Opened j803_cPIC-NCP_lres_sharpened.ccp4 as #30, grid size 400,400,400, pixel
1.05, shown at level 4.13, step 1, values float32
Opened postprocess.mrc as #32, grid size 300,300,300, pixel 1.05, shown at
level 0.016, step 1, values float32
Opened postprocess.mrc as #33, grid size 300,300,300, pixel 1.05, shown at
level 0.01, step 1, values float32
Opened run_half1_class001_unfil.mrc as #34, grid size 300,300,300, pixel 1.05,
shown at level 0.0145, step 1, values float32
Opened upstr_post.mrc as #35, grid size 300,300,300, pixel 1.05, shown at
level 0.018, step 2, values float32
Opened run_class001.mrc as #36, grid size 400,400,400, pixel 1.05, shown at
level 0.0203, step 1, values float32
Opened relion_locres_filtered.mrc as #6, grid size 300,300,300, pixel 1.05,
shown at level 0.0181, step 1, values float32
Opened relion_locres.mrc as #37, grid size 300,300,300, pixel 1.05, shown at
level 23.5, step 2, values float32
Opened relion_locres_filtered.mrc as #39, grid size 400,400,400, pixel 1.05,
shown at level 0.0135, step 1, values float32
Opened relion_locres.mrc as #40, grid size 400,400,400, pixel 1.05, shown at
level 24.7, step 2, values float32
Opened relion_locres_filtered.mrc as #41, grid size 300,300,300, pixel 1.05,
shown at level 0.0184, step 1, values float32
Opened relion_locres.mrc as #42, grid size 300,300,300, pixel 1.05, shown at
level 24.2, step 2, values float32
Opened relion_locres_filtered.mrc copy as #44, grid size 300,300,300, pixel
1.05, shown at level 0.0184, step 1, values float32
Opened relion_locres_filtered.mrc as #43, grid size 200,200,200, pixel 1.05,
shown at level 0.0213, step 1, values float32
Opened relion_locres.mrc as #45, grid size 200,200,200, pixel 1.05, shown at
level 34.5, step 1, values float32
Opened relion_locres_filtered.mrc as #46, grid size 250,250,250, pixel 1.05,
shown at level 0.0263, step 1, values float32
Opened relion_locres.mrc as #47, grid size 250,250,250, pixel 1.05, shown at
level 43.8, step 1, values float32
Opened relion_locres_filtered.mrc as #48, grid size 400,400,400, pixel 1.05,
shown at level 0.0152, step 1, values float32
Opened relion_locres.mrc as #49, grid size 400,400,400, pixel 1.05, shown at
level 24.7, step 2, values float32
Opened relion_locres_filtered.mrc as #50, grid size 200,200,200, pixel 1.05,
shown at level 0.0196, step 1, values float32
Opened relion_locres.mrc as #51, grid size 200,200,200, pixel 1.05, shown at
level 22, step 1, values float32
opened ChimeraX session
> hide #!50 models
> hide #38 models
> show #38 models
> open "/Users/jabrilg/Desktop/10W_processing/fRef/w:
> sub/j897/relion_locres_filtered.mrc"
Opened relion_locres_filtered.mrc as #52, grid size 200,200,200, pixel 1.05,
shown at level 0.0307, step 1, values float32
> open "/Users/jabrilg/Desktop/10W_processing/fRef/w:
> sub/j897/relion_locres.mrc"
Opened relion_locres.mrc as #53, grid size 200,200,200, pixel 1.05, shown at
level 26.3, step 1, values float32
> hide #!53 models
> open /Volumes/EM11600/DATA/jabrilg/maps_Julio_PIC-
> NCP_18W/Modelling/cPIC/10W_PIC-NCP_plusRPB6-plusCAK_REFINED.pdb
Chain information for 10W_PIC-NCP_plusRPB6-plusCAK_REFINED.pdb #54
---
Chain | Description
0 | No description available
1 | No description available
2 | No description available
3 | No description available
4 | No description available
5 | No description available
6 | No description available
7 | No description available
8 | No description available
9 | No description available
A | No description available
B | No description available
C | No description available
D | No description available
E | No description available
F | No description available
G | No description available
H | No description available
I | No description available
J | No description available
K | No description available
L | No description available
M | No description available
N | No description available
O | No description available
Q | No description available
R | No description available
T | No description available
U | No description available
V | No description available
W | No description available
X | No description available
a | No description available
b f | No description available
c | No description available
d | No description available
e | No description available
g | No description available
h | No description available
> select #54
168354 atoms, 170769 bonds, 35 pseudobonds, 10265 residues, 3 models selected
> ui mousemode right "translate selected models"
> view matrix models #54,1,0,0,-63.658,0,1,0,-21.787,0,0,1,-73.258
> view matrix models #54,1,0,0,-79.579,0,1,0,-55.978,0,0,1,-56.834
> view matrix models #54,1,0,0,-91.706,0,1,0,-59.399,0,0,1,-51.755
> fitmap #54 inMap #52
Fit molecule 10W_PIC-NCP_plusRPB6-plusCAK_REFINED.pdb (#54) to map
relion_locres_filtered.mrc (#52) using 168354 atoms
average map value = 0.01215, steps = 808
shifted from previous position = 11.8
rotated from previous position = 6.27 degrees
atoms outside contour = 153634, contour level = 0.030652
Position of 10W_PIC-NCP_plusRPB6-plusCAK_REFINED.pdb (#54) relative to
relion_locres_filtered.mrc (#52) coordinates:
Matrix rotation and translation
0.99791878 -0.02670145 -0.05869537 -79.84595055
0.03177997 0.99566917 0.08736673 -74.47510020
0.05610835 -0.08905024 0.99444553 -47.48358220
Axis -0.80756385 -0.52552388 0.26770373
Axis point 0.00000000 -823.02788813 264.82139190
Rotation angle (degrees) 6.27080825
Shift along axis 90.90761461
> ~select #54
Nothing selected
> hide #!54 models
> view matrix camera
> -0.73766,0.50707,-0.44578,-179.57,0.60783,0.21133,-0.76543,-448.78,-0.29392,-0.8356,-0.46411,-196.55
> surface dust #52 size 10.5
> volume #52 level 0.02143
> ui tool show "Surface Color"
> key red:0.00 white:0.25 blue:0.50 grey:0.75 grey:1.00 showTool true
> ui mousemode right "color key"
> ui mousemode right "translate selected models"
> hide #38 models
> show #38 models
> key rainbow :0.00 :0.25 :0.50 :0.75 :1.00 showTool true
> ui mousemode right "color key"
> ui mousemode right "translate selected models"
> color sample #52.1 map #53 palette #0000ff:#00ffff:#00ff00:#ffff00:#ff0000
Map values for surface "surface": minimum 3.333, mean 4.059, maximum 7.756
> key rainbow :3.33 :4.44 :5.54 :6.65 :7.76 showTool true
> ui mousemode right "color key"
> ui mousemode right "translate selected models"
> save "/Users/jabrilg/Desktop/PhD projects/Papers/hPIC-NCP/Images for
> figures/Ex.Fig2/CAK_lres_color.png" width 1984 height 1134 supersample 3
> transparentBackground true
> key rainbow :3.33 :4.44 :5.54 :6.65 :7.76 showTool true
> ui mousemode right "color key"
> ui mousemode right "translate selected models"
> hide #!52 models
> open "/Users/jabrilg/Desktop/10W_processing/fRef/w: sub/j897/Validation/CAK-
> fitted_real_space_refined_000.cif"
Summary of feedback from opening /Users/jabrilg/Desktop/10W_processing/fRef/w:
sub/j897/Validation/CAK-fitted_real_space_refined_000.cif
---
warnings | Skipping chem_comp category: Missing column 'type' near line 132
Missing entity information. Treating each chain as a separate entity.
Invalid residue range for struct_conf "1": invalid chain "0", near line 93
Invalid residue range for struct_conf "2": invalid chain "0", near line 94
Invalid residue range for struct_conf "3": invalid chain "0", near line 95
Invalid residue range for struct_conf "4": invalid chain "8", near line 96
Invalid residue range for struct_conf "5": invalid chain "8", near line 97
33 messages similar to the above omitted
Missing or incomplete entity_poly_seq table. Inferred polymer connectivity.
Chain information for CAK-fitted_real_space_refined_000.cif #55
---
Chain | Description
0 | No description available
8 | No description available
9 | No description available
> open "/Users/jabrilg/Desktop/10W_processing/fRef/w:
> sub/j897/j897_CAK_lres_sharp.ccp4"
Opened j897_CAK_lres_sharp.ccp4 as #56, grid size 200,200,200, pixel 1.05,
shown at level 4.56, step 1, values float32
> close #56
> open "/Users/jabrilg/Desktop/10W_processing/fRef/w: sub/j897/CAK.mrc"
Opened CAK.mrc as #56, grid size 200,200,200, pixel 1.05, shown at level 1.54,
step 1, values float32
> volume #53 level 27.91
> volume #53 level 27.64
> volume #56 level 3.516
> close #56
> open "/Users/jabrilg/Desktop/Lab meetings/Lab meeting 6/Images/PIC-
> NCP18W_toHaibo_colored_withdensities3.cxs"
Opened run_it025_class003.mrc as #3, grid size 400,400,400, pixel 1.05, shown
at level 0.00472, step 1, values float32
Opened postprocess.mrc as #61, grid size 200,200,200, pixel 1.05, shown at
level 0.0109, step 1, values float32
Opened postprocess.mrc as #64, grid size 250,250,250, pixel 1.05, shown at
level 0.0226, step 1, values float32
Opened postprocess.mrc as #65, grid size 250,250,250, pixel 1.05, shown at
level 0.011, step 1, values float32
opened ChimeraX session
===== Log before crash end =====
Log:
> isolde shorthand
Initialising ISOLDE-specific command aliases:
Alias Equivalent full command
-------------------------------------------------
st isolde step {arguments}
aw isolde add water {arguments}
awsf isolde add water {arguments} sim false
al isolde add ligand {arguments}
aa isolde add aa $1 sel {arguments}
ht isolde mod his sel {arguments}
so setattr sel atoms occupancy {arguments}
ab isolde adjust bfactors {arguments}
ss isolde sim start sel
rt isolde release torsions sel {arguments}
rd isolde release distances sel {arguments}
ra rd; rt
pf isolde pepflip sel
cf isolde cisflip sel
cbb color bfactor {arguments}
cbo color byattr occupancy {arguments}
cbc color {arguments} bychain; color {arguments} byhet
cs clipper set contourSensitivity {arguments}
UCSF ChimeraX version: 1.3 (2021-12-08)
© 2016-2021 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 ATI-3.10.23
OpenGL renderer: AMD Radeon Pro 5700 OpenGL Engine
OpenGL vendor: ATI Technologies Inc.Hardware:
Hardware Overview:
Model Name: iMac
Model Identifier: iMac20,2
Processor Name: 8-Core Intel Core i7
Processor Speed: 3,8 GHz
Number of Processors: 1
Total Number of Cores: 8
L2 Cache (per Core): 256 KB
L3 Cache: 16 MB
Hyper-Threading Technology: Enabled
Memory: 32 GB
Boot ROM Version: 1715.60.5.0.0 (iBridge: 19.16.10647.0.0,0)
Software:
System Software Overview:
System Version: macOS 10.15.7 (19H1615)
Kernel Version: Darwin 19.6.0
Time since boot: 3 days 4:48
Graphics/Displays:
AMD Radeon Pro 5700:
Chipset Model: AMD Radeon Pro 5700
Type: GPU
Bus: PCIe
PCIe Lane Width: x16
VRAM (Total): 8 GB
Vendor: AMD (0x1002)
Device ID: 0x731b
Revision ID: 0x0040
ROM Revision: 113-D1820Q-231
VBIOS Version: 113-D182A2XG-013
Option ROM Version: 113-D182A2XG-013
EFI Driver Version: 01.01.231
Metal: Supported, feature set macOS GPUFamily2 v1
Displays:
iMac:
Display Type: LCD
Resolution: 5120 x 2880 (5K/UHD+ - Ultra High Definition Plus)
UI Looks like: 2560 x 1440
Framebuffer Depth: 30-Bit Color (ARGB2101010)
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: No
Connection Type: Internal
DELL U2412M:
Resolution: 1920 x 1200 (WUXGA - Widescreen Ultra eXtended Graphics Array)
UI Looks like: 1920 x 1200
Framebuffer Depth: 30-Bit Color (ARGB2101010)
Display Serial Number: 0FFXD46G3GLS
Mirror: Off
Online: Yes
Rotation: Supported
Automatically Adjust Brightness: No
Connection Type: Thunderbolt/DisplayPort
Locale: (None, 'UTF-8')
PyQt5 5.15.2, Qt 5.15.2
Installed Packages:
alabaster: 0.7.12
appdirs: 1.4.4
appnope: 0.1.2
Babel: 2.9.1
backcall: 0.2.0
blockdiag: 2.0.1
certifi: 2021.5.30
cftime: 1.5.1.1
charset-normalizer: 2.0.9
ChimeraX-AddCharge: 1.2.2
ChimeraX-AddH: 2.1.11
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.2.3
ChimeraX-AlphaFold: 1.0
ChimeraX-AltlocExplorer: 1.0.1
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.31
ChimeraX-AtomicLibrary: 4.2
ChimeraX-AtomSearch: 2.0
ChimeraX-AtomSearchLibrary: 1.0
ChimeraX-AxesPlanes: 2.0
ChimeraX-BasicActions: 1.1
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.0
ChimeraX-BondRot: 2.0
ChimeraX-BugReporter: 1.0
ChimeraX-BuildStructure: 2.6.1
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.1
ChimeraX-ButtonPanel: 1.0
ChimeraX-CageBuilder: 1.0
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.2
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.2.2
ChimeraX-Clipper: 0.17.0
ChimeraX-ColorActions: 1.0
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5
ChimeraX-CommandLine: 1.1.5
ChimeraX-ConnectStructure: 2.0
ChimeraX-Contacts: 1.0
ChimeraX-Core: 1.3
ChimeraX-CoreFormats: 1.1
ChimeraX-coulombic: 1.3.2
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0
ChimeraX-DataFormats: 1.2.2
ChimeraX-Dicom: 1.0
ChimeraX-DistMonitor: 1.1.5
ChimeraX-DistUI: 1.0
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0
ChimeraX-FunctionKey: 1.0
ChimeraX-Geometry: 1.1
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1
ChimeraX-Hbonds: 2.1.2
ChimeraX-Help: 1.2
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ISOLDE: 1.3
ChimeraX-ItemsInspection: 1.0
ChimeraX-Label: 1.1
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.4
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.1
ChimeraX-Map: 1.1
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1
ChimeraX-Markers: 1.0
ChimeraX-Mask: 1.0
ChimeraX-MatchMaker: 2.0.4
ChimeraX-MDcrds: 2.6
ChimeraX-MedicalToolbar: 1.0.1
ChimeraX-Meeting: 1.0
ChimeraX-MLP: 1.1
ChimeraX-mmCIF: 2.4
ChimeraX-MMTF: 2.1
ChimeraX-Modeller: 1.2.6
ChimeraX-ModelPanel: 1.2.1
ChimeraX-ModelSeries: 1.0
ChimeraX-Mol2: 2.0
ChimeraX-Morph: 1.0
ChimeraX-MouseModes: 1.1
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0.2
ChimeraX-OpenCommand: 1.7
ChimeraX-PDB: 2.6.5
ChimeraX-PDBBio: 1.0
ChimeraX-PDBLibrary: 1.0.2
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.0.1
ChimeraX-PubChem: 2.1
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-ResidueFit: 1.0
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0.1
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.4.6
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0
ChimeraX-Shortcuts: 1.1
ChimeraX-ShowAttr: 1.0
ChimeraX-ShowSequences: 1.0
ChimeraX-SideView: 1.0
ChimeraX-Smiles: 2.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.6.1
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-Struts: 1.0
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0
ChimeraX-SwapRes: 2.1
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.1
ChimeraX-ToolshedUtils: 1.2
ChimeraX-Tug: 1.0
ChimeraX-UI: 1.13.7
ChimeraX-uniprot: 2.2
ChimeraX-UnitCell: 1.0
ChimeraX-ViewDockX: 1.0.1
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0
ChimeraX-WebServices: 1.0
ChimeraX-Zone: 1.0
colorama: 0.4.4
cxservices: 1.1
cycler: 0.11.0
Cython: 0.29.24
decorator: 5.1.0
docutils: 0.17.1
filelock: 3.0.12
funcparserlib: 0.3.6
grako: 3.16.5
h5py: 3.6.0
html2text: 2020.1.16
idna: 3.3
ihm: 0.21
imagecodecs: 2021.4.28
imagesize: 1.3.0
ipykernel: 5.5.5
ipython: 7.23.1
ipython-genutils: 0.2.0
jedi: 0.18.0
Jinja2: 3.0.1
jupyter-client: 6.1.12
jupyter-core: 4.9.1
kiwisolver: 1.3.2
lxml: 4.6.3
lz4: 3.1.3
MarkupSafe: 2.0.1
matplotlib: 3.4.3
matplotlib-inline: 0.1.3
msgpack: 1.0.2
netCDF4: 1.5.7
networkx: 2.6.3
numexpr: 2.8.0
numpy: 1.21.2
openvr: 1.16.801
packaging: 21.0
ParmEd: 3.2.0
parso: 0.8.3
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 8.3.2
pip: 21.2.4
pkginfo: 1.7.1
prompt-toolkit: 3.0.23
psutil: 5.8.0
ptyprocess: 0.7.0
pycollada: 0.7.1
pydicom: 2.1.2
Pygments: 2.10.0
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 3.0.6
PyQt5-commercial: 5.15.2
PyQt5-sip: 12.8.1
PyQtWebEngine-commercial: 5.15.2
python-dateutil: 2.8.2
pytz: 2021.3
pyzmq: 22.3.0
qtconsole: 5.1.1
QtPy: 1.11.3
RandomWords: 0.3.0
requests: 2.26.0
scipy: 1.7.1
setuptools: 57.5.0
sfftk-rw: 0.7.1
six: 1.16.0
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
Sphinx: 4.2.0
sphinx-autodoc-typehints: 1.12.0
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 2.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 2.0.0
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.5
suds-jurko: 0.6
tifffile: 2021.4.8
tinyarray: 1.2.3
tornado: 6.1
traitlets: 5.1.1
urllib3: 1.26.7
wcwidth: 0.2.5
webcolors: 1.11.1
wheel: 0.37.0
wheel-filename: 1.3.0
![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Had just opened a session; was using 15GB at the time.