Opened 3 years ago
Closed 3 years ago
#7287 closed defect (fixed)
KeyError deleting 2D arrow
| Reported by: | Owned by: | Eric Pettersen | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Depiction | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description (last modified by )
The following bug report has been submitted:
Platform: macOS-10.16-x86_64-i386-64bit
ChimeraX Version: 1.4 (2022-06-03 23:39:42 UTC)
Description
(Describe the actions that caused this problem to occur here)
Log:
UCSF ChimeraX version: 1.4 (2022-06-03)
© 2016-2022 Regents of the University of California. All rights reserved.
> open
> /Users/jaletts/Documents/Drosophila/complexI/3DVA/Conformational_states_3DVA_PDaligned_boxed_split.cxs
Opened Closed_Refine_71_box.ccp4 1 as #2.2, grid size 149,217,338, pixel 0.88,
shown at level 0.55, step 1, values float32
Opened Closed_Refine_71_box.ccp4 2 as #2.3, grid size 149,217,338, pixel 0.88,
shown at level 0.55, step 1, values float32
Opened Closed_Refine_71_box.ccp4 3 as #2.4, grid size 149,217,338, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Closed_Refine_71_box.ccp4 4 as #2.5, grid size 149,217,338, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Closed_Refine_71_box.ccp4 5 as #2.6, grid size 149,217,338, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Closed_Refine_71_box.ccp4 6 as #2.7, grid size 149,217,338, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Closed_Refine_71_box.ccp4 7 as #2.8, grid size 149,217,338, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Closed_Refine_71_box.ccp4 8 as #2.9, grid size 149,217,338, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Closed_Refine_71_box.ccp4 9 as #2.10, grid size 149,217,338, pixel
0.88, shown at level 0.5, step 1, values float32
Opened Closed_Refine_71_box.ccp4 10 as #2.11, grid size 149,217,338, pixel
0.88, shown at level 0.5, step 1, values float32
Opened Closed_Refine_71_box.ccp4 11 as #2.12, grid size 149,217,338, pixel
0.88, shown at level 0.5, step 1, values float32
Opened Closed_Refine_71_box.ccp4 12 as #2.13, grid size 149,217,338, pixel
0.88, shown at level 0.5, step 1, values float32
Opened Closed_Refine_71_box.ccp4 13 as #2.14, grid size 149,217,338, pixel
0.88, shown at level 0.5, step 1, values float32
Opened Closed_Refine_71_box.ccp4 14 as #2.15, grid size 149,217,338, pixel
0.88, shown at level 0.5, step 1, values float32
Opened Closed_Refine_71_box.ccp4 15 as #2.16, grid size 149,217,338, pixel
0.88, shown at level 0.5, step 1, values float32
Opened Closed_Refine_71_box.ccp4 16 as #2.17, grid size 149,217,338, pixel
0.88, shown at level 0.5, step 1, values float32
Opened Closed_Refine_71_box.ccp4 17 as #2.18, grid size 149,217,338, pixel
0.88, shown at level 0.5, step 1, values float32
Opened Closed_Refine_71_box.ccp4 18 as #2.19, grid size 149,217,338, pixel
0.88, shown at level 0.5, step 1, values float32
Opened Closed_Refine_71_box.ccp4 19 as #2.20, grid size 149,217,338, pixel
0.88, shown at level 0.5, step 1, values float32
Opened Closed_Refine_71_box.ccp4 20 as #2.21, grid size 149,217,338, pixel
0.88, shown at level 0.5, step 1, values float32
Opened Closed_Refine_71_box.ccp4 21 as #2.22, grid size 149,217,338, pixel
0.88, shown at level 0.5, step 1, values float32
Opened Closed_Refine_71_box.ccp4 22 as #2.23, grid size 149,217,338, pixel
0.88, shown at level 0.5, step 1, values float32
Opened Closed_Refine_71_box.ccp4 23 as #2.24, grid size 149,217,338, pixel
0.88, shown at level 0.5, step 1, values float32
Opened Closed_Refine_71_box.ccp4 24 as #2.25, grid size 149,217,338, pixel
0.88, shown at level 0.5, step 1, values float32
Opened Closed_Refine_71_box.ccp4 25 as #2.26, grid size 149,217,338, pixel
0.88, shown at level 0.5, step 1, values float32
Opened Closed_Refine_71_box.ccp4 26 as #2.27, grid size 149,217,338, pixel
0.88, shown at level 0.5, step 1, values float32
Opened Closed_Refine_71_box.ccp4 27 as #2.28, grid size 149,217,338, pixel
0.88, shown at level 0.5, step 1, values float32
Opened Closed_Refine_71_box.ccp4 28 as #2.29, grid size 149,217,338, pixel
0.88, shown at level 0.5, step 1, values float32
Opened Closed_Refine_71_box.ccp4 29 as #2.30, grid size 149,217,338, pixel
0.88, shown at level 0.5, step 1, values float32
Opened Closed_Refine_71_box.ccp4 30 as #2.31, grid size 149,217,338, pixel
0.88, shown at level 0.5, step 1, values float32
Opened Closed_Refine_71_box.ccp4 31 as #2.32, grid size 149,217,338, pixel
0.88, shown at level 0.5, step 1, values float32
Opened Closed_Refine_71_box.ccp4 32 as #2.33, grid size 149,217,338, pixel
0.88, shown at level 0.5, step 1, values float32
Opened Closed_Refine_71_box.ccp4 33 as #2.34, grid size 149,217,338, pixel
0.88, shown at level 0.5, step 1, values float32
Opened Closed_Refine_71_box.ccp4 34 as #2.35, grid size 149,217,338, pixel
0.88, shown at level 0.5, step 1, values float32
Opened Closed_Refine_71_box.ccp4 35 as #2.36, grid size 149,217,338, pixel
0.88, shown at level 0.5, step 1, values float32
Opened Closed_Refine_71_box.ccp4 36 as #2.37, grid size 149,217,338, pixel
0.88, shown at level 0.5, step 1, values float32
Opened Closed_Refine_71_box.ccp4 37 as #2.38, grid size 149,217,338, pixel
0.88, shown at level 0.5, step 1, values float32
Opened Closed_Refine_71_box.ccp4 38 as #2.39, grid size 149,217,338, pixel
0.88, shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 1 as #1.2, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 2 as #1.3, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 3 as #1.4, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 4 as #1.5, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 5 as #1.6, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 6 as #1.7, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 7 as #1.8, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 8 as #1.9, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 9 as #1.10, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 10 as #1.11, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 11 as #1.12, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 12 as #1.13, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 13 as #1.14, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 14 as #1.15, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 15 as #1.16, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 16 as #1.17, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 17 as #1.18, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 18 as #1.19, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 19 as #1.20, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 20 as #1.21, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 21 as #1.22, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 22 as #1.23, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 23 as #1.24, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 24 as #1.25, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 25 as #1.26, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 26 as #1.27, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 27 as #1.28, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 28 as #1.29, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 29 as #1.30, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 30 as #1.31, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 31 as #1.32, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 32 as #1.33, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 33 as #1.34, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 34 as #1.35, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 35 as #1.36, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 36 as #1.37, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 37 as #1.38, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened Open_Refine73_box.ccp4 38 as #1.39, grid size 147,212,341, pixel 0.88,
shown at level 0.5, step 1, values float32
Opened frame_000_box.ccp4 1 as #5.2, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 2 as #5.3, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 3 as #5.4, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 4 as #5.5, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 5 as #5.6, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 6 as #5.7, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 7 as #5.8, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 8 as #5.9, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 9 as #5.10, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 10 as #5.11, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 11 as #5.12, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 12 as #5.13, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 13 as #5.14, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 14 as #5.15, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 15 as #5.16, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 16 as #5.17, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 17 as #5.18, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 18 as #5.19, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 19 as #5.20, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 20 as #5.21, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 21 as #5.22, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 22 as #5.23, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 23 as #5.24, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 24 as #5.25, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 25 as #5.26, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 26 as #5.27, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 27 as #5.28, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 28 as #5.29, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 29 as #5.30, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 30 as #5.31, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 31 as #5.32, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 32 as #5.33, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 33 as #5.34, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 34 as #5.35, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 35 as #5.36, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 36 as #5.37, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 37 as #5.38, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_000_box.ccp4 38 as #5.39, grid size 75,107,172, pixel 1.76, shown
at level 1.76, step 1, values float32
Opened frame_001_box.ccp4 1 as #6.2, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 2 as #6.3, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 3 as #6.4, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 4 as #6.5, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 5 as #6.6, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 6 as #6.7, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 7 as #6.8, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 8 as #6.9, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 9 as #6.10, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 10 as #6.11, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 11 as #6.12, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 12 as #6.13, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 13 as #6.14, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 14 as #6.15, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 15 as #6.16, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 16 as #6.17, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 17 as #6.18, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 18 as #6.19, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 19 as #6.20, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 20 as #6.21, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 21 as #6.22, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 22 as #6.23, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 23 as #6.24, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 24 as #6.25, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 25 as #6.26, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 26 as #6.27, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 27 as #6.28, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 28 as #6.29, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 29 as #6.30, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 30 as #6.31, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 31 as #6.32, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 32 as #6.33, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 33 as #6.34, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 34 as #6.35, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 35 as #6.36, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 36 as #6.37, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 37 as #6.38, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_001_box.ccp4 38 as #6.39, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 1 as #7.2, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 2 as #7.3, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 3 as #7.4, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 4 as #7.5, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 5 as #7.6, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 6 as #7.7, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 7 as #7.8, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 8 as #7.9, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 9 as #7.10, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 10 as #7.11, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 11 as #7.12, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 12 as #7.13, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 13 as #7.14, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 14 as #7.15, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 15 as #7.16, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 16 as #7.17, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 17 as #7.18, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 18 as #7.19, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 19 as #7.20, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 20 as #7.21, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 21 as #7.22, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 22 as #7.23, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 23 as #7.24, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 24 as #7.25, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 25 as #7.26, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 26 as #7.27, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 27 as #7.28, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 28 as #7.29, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 29 as #7.30, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 30 as #7.31, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 31 as #7.32, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 32 as #7.33, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 33 as #7.34, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 34 as #7.35, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 35 as #7.36, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 36 as #7.37, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 37 as #7.38, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_002_box.ccp4 38 as #7.39, grid size 75,107,172, pixel 1.76, shown
at level 1.75, step 1, values float32
Opened frame_003_box.ccp4 1 as #8.2, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 2 as #8.3, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 3 as #8.4, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 4 as #8.5, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 5 as #8.6, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 6 as #8.7, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 7 as #8.8, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 8 as #8.9, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 9 as #8.10, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 10 as #8.11, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 11 as #8.12, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 12 as #8.13, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 13 as #8.14, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 14 as #8.15, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 15 as #8.16, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 16 as #8.17, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 17 as #8.18, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 18 as #8.19, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 19 as #8.20, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 20 as #8.21, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 21 as #8.22, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 22 as #8.23, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 23 as #8.24, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 24 as #8.25, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 25 as #8.26, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 26 as #8.27, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 27 as #8.28, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 28 as #8.29, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 29 as #8.30, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 30 as #8.31, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 31 as #8.32, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 32 as #8.33, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 33 as #8.34, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 34 as #8.35, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 35 as #8.36, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 36 as #8.37, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 37 as #8.38, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_003_box.ccp4 38 as #8.39, grid size 75,107,172, pixel 1.76, shown
at level 1.74, step 1, values float32
Opened frame_004_box.ccp4 1 as #9.2, grid size 75,107,172, pixel 1.76, shown
at level 1.73, step 1, values float32
Opened frame_004_box.ccp4 2 as #9.3, grid size 75,107,172, pixel 1.76, shown
at level 1.73, step 1, values float32
Opened frame_004_box.ccp4 3 as #9.4, grid size 75,107,172, pixel 1.76, shown
at level 1.73, step 1, values float32
Opened frame_004_box.ccp4 4 as #9.5, grid size 75,107,172, pixel 1.76, shown
at level 1.73, step 1, values float32
Opened frame_004_box.ccp4 5 as #9.6, grid size 75,107,172, pixel 1.76, shown
at level 1.73, step 1, values float32
Opened frame_004_box.ccp4 6 as #9.7, grid size 75,107,172, pixel 1.76, shown
at level 1.73, step 1, values float32
Opened frame_004_box.ccp4 7 as #9.8, grid size 75,107,172, pixel 1.76, shown
at level 1.73, step 1, values float32
Opened frame_004_box.ccp4 8 as #9.9, grid size 75,107,172, pixel 1.76, shown
at level 1.73, step 1, values float32
Opened frame_004_box.ccp4 9 as #9.10, grid size 75,107,172, pixel 1.76, shown
at level 1.73, step 1, values float32
Opened frame_004_box.ccp4 10 as #9.11, grid size 75,107,172, pixel 1.76, shown
at level 1.73, step 1, values float32
Opened frame_004_box.ccp4 11 as #9.12, grid size 75,107,172, pixel 1.76, shown
at level 1.73, step 1, values float32
Opened frame_004_box.ccp4 12 as #9.13, grid size 75,107,172, pixel 1.76, shown
at level 1.73, step 1, values float32
Opened frame_004_box.ccp4 13 as #9.14, grid size 75,107,172, pixel 1.76, shown
at level 1.73, step 1, values float32
Opened frame_004_box.ccp4 14 as #9.15, grid size 75,107,172, pixel 1.76, shown
at level 1.73, step 1, values float32
Opened frame_004_box.ccp4 15 as #9.16, grid size 75,107,172, pixel 1.76, shown
at level 1.73, step 1, values float32
Opened frame_004_box.ccp4 16 as #9.17, grid size 75,107,172, pixel 1.76, shown
at level 1.73, step 1, values float32
Opened frame_004_box.ccp4 17 as #9.18, grid size 75,107,172, pixel 1.76, shown
at level 1.73, step 1, values float32
Opened frame_004_box.ccp4 18 as #9.19, grid size 75,107,172, pixel 1.76, shown
at level 1.73, step 1, values float32
Opened frame_004_box.ccp4 19 as #9.20, grid size 75,107,172, pixel 1.76, shown
at level 1.73, step 1, values float32
Opened frame_004_box.ccp4 20 as #9.21, grid size 75,107,172, pixel 1.76, shown
at level 1.73, step 1, values float32
Opened frame_004_box.ccp4 21 as #9.22, grid size 75,107,172, pixel 1.76, shown
at level 1.73, step 1, values float32
Opened frame_004_box.ccp4 22 as #9.23, grid size 75,107,172, pixel 1.76, shown
at level 1.73, step 1, values float32
Opened frame_004_box.ccp4 23 as #9.24, grid size 75,107,172, pixel 1.76, shown
at level 1.73, step 1, values float32
Opened frame_004_box.ccp4 24 as #9.25, grid size 75,107,172, pixel 1.76, shown
at level 1.73, step 1, values float32
Opened frame_004_box.ccp4 25 as #9.26, grid size 75,107,172, pixel 1.76, shown
at level 1.73, step 1, values float32
Opened frame_004_box.ccp4 26 as #9.27, grid size 75,107,172, pixel 1.76, shown
at level 1.73, step 1, values float32
Opened frame_004_box.ccp4 27 as #9.28, grid size 75,107,172, pixel 1.76, shown
at level 1.73, step 1, values float32
Opened frame_004_box.ccp4 28 as #9.29, grid size 75,107,172, pixel 1.76, shown
at level 1.73, step 1, values float32
Opened frame_004_box.ccp4 29 as #9.30, grid size 75,107,172, pixel 1.76, shown
at level 1.73, step 1, values float32
Opened frame_004_box.ccp4 30 as #9.31, grid size 75,107,172, pixel 1.76, shown
at level 1.73, step 1, values float32
[lots of non-2dlabel commands deleted]
> hide #16
> show #17
> wait 1
> hide #17
> show #18
> wait 1
> hide #18
> show #19
> wait 1
> hide #19
> show #20
> wait 1
> hide #20
> show #21
> wait 1
> hide #21
> show #22
> wait 1
> hide #22
> show #23
> wait 1
> hide #23
> show #24
> wait 1
> hide #24
> show #25
> wait 1
> hide #25
> show #26
> wait 1
> hide #26
> show #27
> wait 1
> hide #27
> show #28
> wait 1
> hide #28
> show #29
> wait 1
> hide #29
> show #30
> wait 1
> hide #30
> show #31
> wait 1
> hide #31
> show #32
> wait 1
> hide #32
> show #33
> wait 1
> hide #33
> show #34
> wait 1
> hide #34
> show #35
> wait 1
> hide #35
> show #36
> wait 1
> hide #36
> show #37
> wait 1
> hide #37
> show #38
> wait 1
> hide #38
> show #39
> wait 1
> hide #39
> show #40
> wait 1
> hide #40
> show #41
> wait 1
> hide #41
> show #42
> wait 1
> hide #42
> show #43
> wait 1
> hide #43
> show #44
> wait 1
> hide #44
> show #45
> wait 1
> hide #45
> show #46
> wait 1
> hide #46
> show #47
> wait 1
> hide #47
> show #48
> wait 1
> hide #48
> show #49
> wait 1
> hide #49
> show #50
> wait 1
> hide #50
> show #51
> wait 1
> hide #51
> show #52
> wait 1
> hide #52
> show #53
> wait 1
> hide #53
> show #54
> wait 1
> 2dlabels text "Closed State" color #003399 size 42 xpos .60 ypos .900 font
> arial
> wait 20
> 2dlabels delete
> hide #54
> show #53
> wait 1
> hide #53
> show #52
> wait 1
> hide #52
> show #51
> wait 1
> hide #51
> show #50
> wait 1
> hide #50
> show #49
> wait 1
> hide #49
> show #48
> wait 1
> hide #48
> show #47
> wait 1
> hide #47
> show #46
> wait 1
> hide #46
> show #45
> wait 1
> hide #45
> show #44
> wait 1
> hide #44
> show #43
> wait 1
> hide #43
> show #42
> wait 1
> hide #42
> show #41
> wait 1
> hide #41
> show #40
> wait 1
> hide #40
> show #39
> wait 1
> hide #39
> show #38
> wait 1
> hide #38
> show #37
> wait 1
> hide #37
> show #36
> wait 1
> hide #36
> show #35
> wait 1
> hide #35
> show #34
> wait 1
> hide #34
> show #33
> wait 1
> hide #33
> show #32
> wait 1
> hide #32
> show #31
> wait 1
> hide #31
> show #30
> wait 1
> hide #30
> show #29
> wait 1
> hide #29
> show #28
> wait 1
> hide #28
> show #27
> wait 1
> hide #27
> show #26
> wait 1
> hide #26
> show #25
> wait 1
> hide #25
> show #24
> wait 1
> hide #24
> show #23
> wait 1
> hide #23
> show #22
> wait 1
> hide #22
> show #21
> wait 1
> hide #21
> show #20
> wait 1
> hide #20
> show #19
> wait 1
> hide #19
> show #18
> wait 1
> hide #18
> show #17
> wait 1
> hide #17
> show #16
> wait 1
> hide #16
> show #15
> wait 1
> hide #15
> show #14
> wait 1
> hide #14
> show #13
> wait 1
> hide #13
> show #12
> wait 1
> hide #12
> show #11
> wait 1
> hide #11
> show #10
> wait 1
> hide #10
> show #9
> wait 1
> hide #9
> show #8
> wait 1
> hide #8
> show #7
> wait 1
> hide #7
> show #6
> wait 1
> hide #6
> show #5
> wait 1
> 2dlabels text "Obstructed Open State" color #003399 size 42 xpos .60 ypos
> .900 font arial
> wait 20
> 2dlabels delete
> hide #5
> show #6
> wait 1
> hide #6
> show #7
> wait 1
> hide #7
> show #8
> wait 1
> hide #8
> show #9
> wait 1
> hide #9
> show #10
> wait 1
> hide #10
> show #11
> wait 1
> hide #11
> show #12
> wait 1
> hide #12
> show #13
> wait 1
> hide #13
> show #14
> wait 1
> hide #14
> show #15
> wait 1
> hide #15
> show #16
> wait 1
> hide #16
> show #17
> wait 1
> hide #17
> show #18
> wait 1
> hide #18
> show #19
> wait 1
> hide #19
> show #20
> wait 1
> hide #20
> show #21
> wait 1
> hide #21
> show #22
> wait 1
> hide #22
> show #23
> wait 1
> hide #23
> show #24
> wait 1
> hide #24
> show #25
> wait 1
> hide #25
> show #26
> wait 1
> hide #26
> show #27
> wait 1
> hide #27
> show #28
> wait 1
> hide #28
> show #29
> wait 1
> hide #29
> show #30
> wait 1
> hide #30
> show #31
> wait 1
> hide #31
> show #32
> wait 1
> hide #32
> show #33
> wait 1
> hide #33
> show #34
> wait 1
> hide #34
> show #35
> wait 1
> hide #35
> show #36
> wait 1
> hide #36
> show #37
> wait 1
> hide #37
> show #38
> wait 1
> hide #38
> show #39
> wait 1
> hide #39
> show #40
> wait 1
> hide #40
> show #41
> wait 1
> hide #41
> show #42
> wait 1
> hide #42
> show #43
> wait 1
> hide #43
> show #44
> wait 1
> hide #44
> show #45
> wait 1
> hide #45
> show #46
> wait 1
> hide #46
> show #47
> wait 1
> hide #47
> show #48
> wait 1
> hide #48
> show #49
> wait 1
> hide #49
> show #50
> wait 1
> hide #50
> show #51
> wait 1
> hide #51
> show #52
> wait 1
> hide #52
> show #53
> wait 1
> hide #53
> show #54
> 2dlabels text "Closed State" color #003399 size 42 xpos .60 ypos .900 font
> arial
> wait 20
> 2dlabels delete
> wait 1
> hide #54
> show #53
> wait 1
> hide #53
> show #52
> wait 1
> hide #52
> show #51
> wait 1
> hide #51
> show #50
> wait 1
> hide #50
> show #49
> wait 1
> hide #49
> show #48
> wait 1
> hide #48
> show #47
> wait 1
> hide #47
> show #46
> wait 1
> hide #46
> show #45
> wait 1
> hide #45
> show #44
> wait 1
> hide #44
> show #43
> wait 1
> hide #43
> show #42
> wait 1
> hide #42
> show #41
> wait 1
> hide #41
> show #40
> wait 1
> hide #40
> show #39
> wait 1
> hide #39
> show #38
> wait 1
> hide #38
> show #37
> wait 1
> hide #37
> show #36
> wait 1
> hide #36
> show #35
> wait 1
> hide #35
> show #34
> wait 1
> hide #34
> show #33
> wait 1
> hide #33
> show #32
> wait 1
> hide #32
> show #31
> wait 1
> hide #31
> show #30
> wait 1
> hide #30
> show #29
> wait 1
> hide #29
> show #28
> wait 1
> hide #28
> show #27
> wait 1
> hide #27
> show #26
> wait 1
> hide #26
> show #25
> wait 1
> hide #25
> show #24
> wait 1
> hide #24
> show #23
> wait 1
> hide #23
> show #22
> wait 1
> hide #22
> show #21
> wait 1
> hide #21
> show #20
> wait 1
> hide #20
> show #19
> wait 1
> hide #19
> show #18
> wait 1
> hide #18
> show #17
> wait 1
> hide #17
> show #16
> wait 1
> hide #16
> show #15
> wait 1
> hide #15
> show #14
> wait 1
> hide #14
> show #13
> wait 1
> hide #13
> show #12
> wait 1
> hide #12
> show #11
> wait 1
> hide #11
> show #10
> wait 1
> hide #10
> show #9
> wait 1
> hide #9
> show #8
> wait 1
> hide #8
> show #7
> wait 1
> hide #7
> show #6
> wait 1
> hide #6
> show #5
> wait 1
> 2dlabels text "Obstructed Open State" color #003399 size 42 xpos .60 ypos
> .900 font arial
> wait 2
> fly 50 p1 p2
> wait 50
> clip near -140 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -138 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -136 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -134 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -132 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -130 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -128 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -126 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -124 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -122 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -120 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -118 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -116 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -114 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -112 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -110 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -108 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -106 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -104 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -102 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -100 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -98 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -96 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -94 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -92 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -90 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -88 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -86 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -84 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -82 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -80 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -78 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -76 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -74 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -72 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -70 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -68 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -66 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -64 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -62 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -60 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -58 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -56 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -54 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -52 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -50 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -48 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -46 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -44 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -42 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -40 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -38 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -36 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -34 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -32 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -30 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -28 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -26 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 1
> clip near -24 position 221.6,235.9,225.9 axis 0.005,0.873,-0.487
> wait 5
> 2dlabels text NDUFS7 color #CAE0AB size 32 xpos .215 ypos .69 font arial
> 2dlabels text NDUFS2 color #F6C141 size 32 xpos .209 ypos .38 font arial
> 2dlabels text NDUFA9 color #6F4C9B size 32 xpos .4 ypos .89 font arial
> 2dlabels text NDUFA12 color #D1B541 size 32 xpos .147 ypos .55 font arial
> 2dlabels text "ND3 TMH1-2 loop" color black size 24 xpos .50 ypos .750 font
> arial
> 2dlabels arrow start .51,.74 end .43,.6 color black weight 0.25 headStyle
> solid
> 2dlabels text "NDUFA9 "latched"" color black size 24 xpos .52 ypos .70 font
> arial
> 2dlabels arrow start .53,.69 end .495,.635 color black weight 0.25 headStyle
> solid
> 2dlabels text Q-site color black size 24 xpos .20 ypos .48 font arial
> 2dlabels arrow start .24,.49 end .345,.51 color black weight 0.25 headStyle
> solid
> 2dlabels text ⭕ size 64 xpos .35 ypos .476 font arial
> 2dlabels delete
Traceback (most recent call last):
File
"/opt/sbgrid/i386-mac/chimerax/1.4/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/open_command/dialog.py", line 162, in _qt_safe
run(session, "open " + " ".join([FileNameArg.unparse(p) for p in paths]) + (""
File
"/opt/sbgrid/i386-mac/chimerax/1.4/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/core/commands/run.py", line 38, in run
results = command.run(text, log=log, return_json=return_json)
File
"/opt/sbgrid/i386-mac/chimerax/1.4/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/core/commands/cli.py", line 2897, in run
result = ci.function(session, **kw_args)
File
"/opt/sbgrid/i386-mac/chimerax/1.4/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/open_command/cmd.py", line 118, in cmd_open
models = Command(session, registry=registry).run(provider_cmd_text,
log=log)[0]
File
"/opt/sbgrid/i386-mac/chimerax/1.4/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/core/commands/cli.py", line 2897, in run
result = ci.function(session, **kw_args)
File
"/opt/sbgrid/i386-mac/chimerax/1.4/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/open_command/cmd.py", line 193, in provider_open
models, status = collated_open(session, None, [data], data_format,
_add_models,
File
"/opt/sbgrid/i386-mac/chimerax/1.4/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/open_command/cmd.py", line 440, in collated_open
return remember_data_format()
File
"/opt/sbgrid/i386-mac/chimerax/1.4/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/open_command/cmd.py", line 428, in remember_data_format
models, status = func(*func_args, **func_kw)
File
"/opt/sbgrid/i386-mac/chimerax/1.4/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/core_formats/__init__.py", line 37, in open
return open_command_script(session, data, file_name, **kw)
File
"/opt/sbgrid/i386-mac/chimerax/1.4/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/core/scripting.py", line 160, in open_command_script
_run_commands(session, commands, directory = dirname(path), log = log)
File
"/opt/sbgrid/i386-mac/chimerax/1.4/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/core/scripting.py", line 173, in _run_commands
run(session, cmd, log=log)
File
"/opt/sbgrid/i386-mac/chimerax/1.4/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/core/commands/run.py", line 38, in run
results = command.run(text, log=log, return_json=return_json)
File
"/opt/sbgrid/i386-mac/chimerax/1.4/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/core/commands/cli.py", line 2897, in run
result = ci.function(session, **kw_args)
File
"/opt/sbgrid/i386-mac/chimerax/1.4/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/label/label2d.py", line 280, in label_delete
l.delete()
File
"/opt/sbgrid/i386-mac/chimerax/1.4/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/label/arrows.py", line 414, in delete
lm.delete_arrow(self)
File
"/opt/sbgrid/i386-mac/chimerax/1.4/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/label/arrows.py", line 312, in delete_arrow
del self._named_arrows[arrow.name]
KeyError: 'arrow 1'
Populating font family aliases took 401 ms. Replace uses of missing font
family ".AppleSystemUIFont" with one that exists to avoid this cost.
KeyError: 'arrow 1'
File
"/opt/sbgrid/i386-mac/chimerax/1.4/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-
packages/chimerax/label/arrows.py", line 312, in delete_arrow
del self._named_arrows[arrow.name]
See log for complete Python traceback.
OpenGL version: 4.1 ATI-4.8.54
OpenGL renderer: AMD Radeon Pro 560X OpenGL Engine
OpenGL vendor: ATI Technologies Inc.
Python: 3.9.11
Locale: UTF-8
Qt version: PyQt6 6.3.0, Qt 6.3.0
Qt runtime version: 6.3.0
Qt platform: cocoa
Hardware:
Hardware Overview:
Model Name: MacBook Pro
Model Identifier: MacBookPro15,1
Processor Name: 6-Core Intel Core i9
Processor Speed: 2.9 GHz
Number of Processors: 1
Total Number of Cores: 6
L2 Cache (per Core): 256 KB
L3 Cache: 12 MB
Hyper-Threading Technology: Enabled
Memory: 32 GB
System Firmware Version: 1731.120.10.0.0 (iBridge: 19.16.15071.0.0,0)
OS Loader Version: 540.120.3~6
Software:
System Software Overview:
System Version: macOS 12.4 (21F79)
Kernel Version: Darwin 21.5.0
Time since boot: 34 days 20:30
Graphics/Displays:
Intel UHD Graphics 630:
Chipset Model: Intel UHD Graphics 630
Type: GPU
Bus: Built-In
VRAM (Dynamic, Max): 1536 MB
Vendor: Intel
Device ID: 0x3e9b
Revision ID: 0x0000
Automatic Graphics Switching: Supported
gMux Version: 5.0.0
Metal Family: Supported, Metal GPUFamily macOS 2
Radeon Pro 560X:
Chipset Model: Radeon Pro 560X
Type: GPU
Bus: PCIe
PCIe Lane Width: x8
VRAM (Total): 4 GB
Vendor: AMD (0x1002)
Device ID: 0x67ef
Revision ID: 0x00c2
ROM Revision: 113-C980AL-075
VBIOS Version: 113-C97501U-005
EFI Driver Version: 01.A1.075
Automatic Graphics Switching: Supported
gMux Version: 5.0.0
Metal Family: Supported, Metal GPUFamily macOS 2
Displays:
Color LCD:
Display Type: Built-In Retina LCD
Resolution: 2880 x 1800 Retina
Framebuffer Depth: 24-Bit Color (ARGB8888)
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: Yes
Connection Type: Internal
HP VH240a:
Resolution: 1920 x 1080 (1080p FHD - Full High Definition)
UI Looks like: 1920 x 1080 @ 60.00Hz
Framebuffer Depth: 30-Bit Color (ARGB2101010)
Display Serial Number: 6CM94409F7
Mirror: Off
Online: Yes
Rotation: Supported
Connection Type: DVI or HDMI
Adapter Firmware Version: 7.55
LG UltraFine:
Resolution: 5120 x 2880 (5K/UHD+ - Ultra High Definition Plus)
UI Looks like: 2560 x 1440
Framebuffer Depth: 30-Bit Color (ARGB2101010)
Display Serial Number: 807NTJJDU436
Mirror: Off
Online: Yes
Rotation: Supported
Automatically Adjust Brightness: Yes
Connection Type: Thunderbolt/DisplayPort
Installed Packages:
alabaster: 0.7.12
appdirs: 1.4.4
appnope: 0.1.3
Babel: 2.10.1
backcall: 0.2.0
blockdiag: 3.0.0
certifi: 2021.10.8
cftime: 1.6.0
charset-normalizer: 2.0.12
ChimeraX-AddCharge: 1.2.3
ChimeraX-AddH: 2.1.11
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2.1
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.4.3
ChimeraX-AlphaFold: 1.0
ChimeraX-AltlocExplorer: 1.0.2
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.39.1
ChimeraX-AtomicLibrary: 7.0
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.1
ChimeraX-BasicActions: 1.1
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.1.1
ChimeraX-BondRot: 2.0
ChimeraX-BugReporter: 1.0
ChimeraX-BuildStructure: 2.7
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.1
ChimeraX-ButtonPanel: 1.0
ChimeraX-CageBuilder: 1.0
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.2
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.2.4
ChimeraX-ColorActions: 1.0
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.1
ChimeraX-CommandLine: 1.2.3
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0
ChimeraX-Core: 1.4
ChimeraX-CoreFormats: 1.1
ChimeraX-coulombic: 1.3.2
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0
ChimeraX-DataFormats: 1.2.2
ChimeraX-Dicom: 1.1
ChimeraX-DistMonitor: 1.1.5
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0
ChimeraX-FunctionKey: 1.0
ChimeraX-Geometry: 1.2
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1
ChimeraX-Hbonds: 2.1.2
ChimeraX-Help: 1.2
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ItemsInspection: 1.0
ChimeraX-Label: 1.1.1
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.5
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.1
ChimeraX-Map: 1.1
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1
ChimeraX-Markers: 1.0
ChimeraX-Mask: 1.0
ChimeraX-MatchMaker: 2.0.6
ChimeraX-MDcrds: 2.6
ChimeraX-MedicalToolbar: 1.0.1
ChimeraX-Meeting: 1.0
ChimeraX-MLP: 1.1
ChimeraX-mmCIF: 2.7
ChimeraX-MMTF: 2.1
ChimeraX-Modeller: 1.5.5
ChimeraX-ModelPanel: 1.3.2
ChimeraX-ModelSeries: 1.0
ChimeraX-Mol2: 2.0
ChimeraX-Morph: 1.0
ChimeraX-MouseModes: 1.1
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0.2
ChimeraX-OpenCommand: 1.9
ChimeraX-PDB: 2.6.6
ChimeraX-PDBBio: 1.0
ChimeraX-PDBLibrary: 1.0.2
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1
ChimeraX-PubChem: 2.1
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-ResidueFit: 1.0
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0.1
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5.1
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.6
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0
ChimeraX-Shortcuts: 1.1
ChimeraX-ShowAttr: 1.0
ChimeraX-ShowSequences: 1.0
ChimeraX-SideView: 1.0
ChimeraX-Smiles: 2.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.8
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.0.1
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0
ChimeraX-SwapRes: 2.1.1
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.1.1
ChimeraX-ToolshedUtils: 1.2.1
ChimeraX-Tug: 1.0
ChimeraX-UI: 1.18.3
ChimeraX-uniprot: 2.2
ChimeraX-UnitCell: 1.0
ChimeraX-ViewDockX: 1.1.2
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0
ChimeraX-WebServices: 1.1.0
ChimeraX-Zone: 1.0
colorama: 0.4.4
cxservices: 1.2
cycler: 0.11.0
Cython: 0.29.26
debugpy: 1.6.0
decorator: 5.1.1
docutils: 0.17.1
entrypoints: 0.4
filelock: 3.4.2
fonttools: 4.33.3
funcparserlib: 1.0.0
grako: 3.16.5
h5py: 3.7.0
html2text: 2020.1.16
idna: 3.3
ihm: 0.27
imagecodecs: 2021.11.20
imagesize: 1.3.0
ipykernel: 6.6.1
ipython: 7.31.1
ipython-genutils: 0.2.0
jedi: 0.18.1
Jinja2: 3.0.3
jupyter-client: 7.1.0
jupyter-core: 4.10.0
kiwisolver: 1.4.2
line-profiler: 3.4.0
lxml: 4.7.1
lz4: 3.1.10
MarkupSafe: 2.1.1
matplotlib: 3.5.1
matplotlib-inline: 0.1.3
msgpack: 1.0.3
nest-asyncio: 1.5.5
netCDF4: 1.5.8
networkx: 2.6.3
numexpr: 2.8.1
numpy: 1.22.1
openvr: 1.16.802
packaging: 21.0
ParmEd: 3.4.3
parso: 0.8.3
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 9.0.1
pip: 21.3.1
pkginfo: 1.8.2
prompt-toolkit: 3.0.29
psutil: 5.9.0
ptyprocess: 0.7.0
pycollada: 0.7.2
pydicom: 2.2.2
Pygments: 2.11.2
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 3.0.9
PyQt6-commercial: 6.3.0
PyQt6-Qt6: 6.3.0
PyQt6-sip: 13.3.1
PyQt6-WebEngine-commercial: 6.3.0
PyQt6-WebEngine-Qt6: 6.3.0
python-dateutil: 2.8.2
pytz: 2022.1
pyzmq: 23.1.0
qtconsole: 5.3.0
QtPy: 2.1.0
RandomWords: 0.3.0
requests: 2.27.1
scipy: 1.7.3
setuptools: 59.8.0
sfftk-rw: 0.7.2
six: 1.16.0
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
Sphinx: 4.3.2
sphinx-autodoc-typehints: 1.15.2
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 2.0.0
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.5
suds-community: 1.0.0
tables: 3.7.0
tifffile: 2021.11.2
tinyarray: 1.2.4
tornado: 6.1
traitlets: 5.1.1
urllib3: 1.26.9
wcwidth: 0.2.5
webcolors: 1.11.1
wheel: 0.37.1
wheel-filename: 1.3.0
Change History (2)
comment:1 by , 3 years ago
| Component: | Unassigned → Depiction |
|---|---|
| Description: | modified (diff) |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → accepted |
| Summary: | ChimeraX bug report submission → KeyError deleting 2D arrow |
comment:2 by , 3 years ago
| Resolution: | → fixed |
|---|---|
| Status: | accepted → closed |
Note:
See TracTickets
for help on using tickets.
Fix: https://github.com/RBVI/ChimeraX/commit/99c36da31090615ae47445b7d2c5198fbcc33d68