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Opened 3 years ago
Closed 3 years ago
#7248 closed defect (duplicate)
Crash saving atomic session state
| Reported by: | Owned by: | Eric Pettersen | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Sessions | Version: | |
| Keywords: | Cc: | Tom Goddard | |
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: macOS-10.16-x86_64-i386-64bit
ChimeraX Version: 1.5.dev202207070159 (2022-07-07 01:59:45 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Fatal Python error: Segmentation fault
Thread 0x00000003250fc000 (most recent call first):
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 576 in _handle_results
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x00000003240f9000 (most recent call first):
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 528 in _handle_tasks
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x00000003230f6000 (most recent call first):
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/selectors.py", line 416 in select
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/connection.py", line 936 in wait
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 499 in _wait_for_updates
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 519 in _handle_workers
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x00000003220f3000 (most recent call first):
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 114 in worker
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x00000003210f0000 (most recent call first):
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 114 in worker
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x00000003200ed000 (most recent call first):
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 114 in worker
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x000000031f0ea000 (most recent call first):
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 114 in worker
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x000000031e0e7000 (most recent call first):
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 114 in worker
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x000000031d0e4000 (most recent call first):
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 114 in worker
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x000000031c0e1000 (most recent call first):
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 114 in worker
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x000000031b0de000 (most recent call first):
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 114 in worker
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x000000031a0db000 (most recent call first):
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 114 in worker
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x00000003190d8000 (most recent call first):
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 114 in worker
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Current thread 0x0000000204a63600 (most recent call first):
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/atomic/molobject.py", line 1900 in save_state
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/atomic/structure.py", line 209 in take_snapshot
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/atomic/structure.py", line 1389 in take_snapshot
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/session.py", line 285 in process
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/session.py", line 262 in discovery
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/session.py", line 625 in save
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/session.py", line 896 in save
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core_formats/__init__.py", line 84 in save
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/save_command/cmd.py", line 90 in provider_save
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/commands/cli.py", line 2897 in run
File "/private/var/folders/pv/p4r5cqd171v6y9ds5gwfnqz80000gn/T/AppTranslocation/DA07E5B5-406D-44CF-AFD3-0249988556F5/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/save_command/cmd.py", line 75 in cmd_save
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===== Log before crash start =====
UCSF ChimeraX version: 1.5.dev202207070159 (2022-07-07)
© 2016-2022 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open
> /Users/lmillervedam/Documents/Budapest_LMV/Bteam_sessions/esr1_agonist_antagonist_pdbs_H12poses.cxs
opened ChimeraX session
> save
> /Users/lmillervedam/Documents/Budapest_LMV/Bteam_sessions/esr1_pdbs_singlechains_H12poses_v3.cxs
> show #!330 models
> show #!329 models
> show #!328 models
> show #!327 models
Drag select of 590 atoms, 951 residues, 551 bonds
> select up
7887 atoms, 8021 bonds, 966 residues, 3 models selected
> select up
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> select up
9908 atoms, 10086 bonds, 1214 residues, 3 models selected
> select up
11341 atoms, 11558 bonds, 1403 residues, 3 models selected
> delete sel
Drag select of 219 atoms, 384 residues, 189 bonds
> select up
3111 atoms, 3116 bonds, 395 residues, 4 models selected
> select up
3189 atoms, 3215 bonds, 395 residues, 4 models selected
> select up
4498 atoms, 4586 bonds, 563 residues, 4 models selected
> select up
6942 atoms, 7075 bonds, 865 residues, 4 models selected
> delete sel
> select add #327/B:513
10 atoms, 10 bonds, 1 residue, 1 model selected
> select add #327/B:478
17 atoms, 16 bonds, 2 residues, 1 model selected
> select up
486 atoms, 492 bonds, 59 residues, 1 model selected
> select up
507 atoms, 514 bonds, 62 residues, 1 model selected
> delete sel
> hide #!327 models
> hide #!328 models
> hide #!329 models
> hide #!330 models
> show #!326 models
> show #!325 models
> show #!324 models
> show #!323 models
Drag select of 396 atoms, 856 residues, 359 bonds
Drag select of 3 atoms, 364 residues, 1 bonds
Drag select of 69 atoms, 382 residues, 53 bonds
> select up
12928 atoms, 13098 bonds, 1621 residues, 4 models selected
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13096 atoms, 13293 bonds, 1621 residues, 4 models selected
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> select up
24149 atoms, 24588 bonds, 3007 residues, 4 models selected
> select down
18574 atoms, 18900 bonds, 2298 residues, 4 models selected
> select clear
Drag select of 247 atoms, 353 residues, 224 bonds
Drag select of 27 atoms, 410 residues, 23 bonds
> select up
6198 atoms, 6263 bonds, 774 residues, 4 models selected
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6306 atoms, 6385 bonds, 774 residues, 4 models selected
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10658 atoms, 10833 bonds, 1315 residues, 4 models selected
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14737 atoms, 15009 bonds, 1833 residues, 4 models selected
> delete sel
Drag select of 18 residues
Drag select of 285 atoms, 195 residues, 257 bonds
> select up
1832 atoms, 1827 bonds, 229 residues, 4 models selected
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1957 atoms, 1982 bonds, 229 residues, 4 models selected
> select up
3783 atoms, 3850 bonds, 448 residues, 4 models selected
> select up
7517 atoms, 7660 bonds, 923 residues, 4 models selected
> delete sel
> select add #323/B:426
8 atoms, 7 bonds, 1 residue, 1 model selected
> select add #325/C:328
20 atoms, 19 bonds, 2 residues, 2 models selected
> select up
151 atoms, 152 bonds, 18 residues, 2 models selected
> select up
339 atoms, 343 bonds, 42 residues, 2 models selected
> delete sel
> hide #!323 models
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> hide #!325 models
> hide #!326 models
> show #!322 models
> show #!321 models
> show #!320 models
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> show #!318 models
Drag select of 345 atoms, 416 residues, 330 bonds
Drag select of 223 residues
> select up
5228 atoms, 3538 bonds, 648 residues, 4 models selected
> select up
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> select up
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14059 atoms, 14310 bonds, 1753 residues, 4 models selected
> select up
15106 atoms, 14762 bonds, 2407 residues, 4 models selected
> delete sel
Drag select of 199 atoms, 511 residues, 183 bonds
> select up
4110 atoms, 4152 bonds, 520 residues, 4 models selected
> select up
4182 atoms, 4235 bonds, 520 residues, 4 models selected
> select up
5303 atoms, 5393 bonds, 662 residues, 4 models selected
> select up
7247 atoms, 7379 bonds, 900 residues, 4 models selected
> delete sel
> hide #!318 models
> show #!317 models
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> hide #!322 models
> show #!316 models
> show #!315 models
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Drag select of 316 atoms, 462 residues, 259 bonds
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5694 atoms, 5685 bonds, 503 residues, 4 models selected
> select up
5981 atoms, 5985 bonds, 503 residues, 4 models selected
> select up
10905 atoms, 10994 bonds, 914 residues, 4 models selected
> select up
17155 atoms, 17330 bonds, 1382 residues, 4 models selected
> delete sel
> select add #313/D:524
10 atoms, 10 bonds, 1 residue, 1 model selected
> select add #313/D:472
15 atoms, 14 bonds, 2 residues, 1 model selected
> select add #313/B:543
20 atoms, 18 bonds, 3 residues, 1 model selected
> select add #313/C:538
25 atoms, 22 bonds, 4 residues, 1 model selected
> select up
612 atoms, 617 bonds, 82 residues, 1 model selected
> select up
648 atoms, 656 bonds, 87 residues, 1 model selected
> select up
762 atoms, 714 bonds, 151 residues, 1 model selected
> delete sel
> show #!312 models
> hide #!313 models
> hide #!314 models
> hide #!315 models
> hide #!316 models
> hide #!317 models
Drag select of 25 atoms, 111 residues, 19 bonds
Drag select of 52 atoms, 199 residues, 51 bonds
> select up
2458 atoms, 2467 bonds, 314 residues, 1 model selected
> select up
2492 atoms, 2509 bonds, 314 residues, 1 model selected
> select up
4071 atoms, 4136 bonds, 510 residues, 1 model selected
> select up
5671 atoms, 5784 bonds, 717 residues, 1 model selected
> delete sel
> show #!311 models
> show #!310 models
> show #!309 models
> show #!308 models
> hide #!312 models
Drag select of 220 atoms, 423 residues, 197 bonds
> select up
3364 atoms, 3408 bonds, 433 residues, 3 models selected
> select up
3394 atoms, 3441 bonds, 433 residues, 3 models selected
> select up
4057 atoms, 4121 bonds, 519 residues, 3 models selected
> select up
5396 atoms, 5487 bonds, 691 residues, 3 models selected
> delete sel
> hide #!311 models
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> show #!307 models
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> hide #!297 models
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> show #!294 models
Drag select of 168 atoms, 406 residues, 159 bonds
Drag select of 8 atoms, 110 residues, 8 bonds
> select up
4048 atoms, 4105 bonds, 518 residues, 2 models selected
> select up
4077 atoms, 4141 bonds, 518 residues, 2 models selected
> select up
6204 atoms, 6320 bonds, 789 residues, 2 models selected
> delete sel
Drag select of 86 atoms, 72 residues, 89 bonds
> select up
601 atoms, 605 bonds, 77 residues, 2 models selected
> select up
927 atoms, 937 bonds, 117 residues, 2 models selected
> select up
1083 atoms, 1095 bonds, 138 residues, 2 models selected
> delete sel
> show #!288 models
> hide #!289 models
> hide #!294 models
> hide #!295 models
> show #!287 models
> show #!286 models
> show #!285 models
> show #!284 models
Drag select of 559 residues, 176 atoms, 162 bonds
Drag select of 163 residues
Drag select of 193 residues
> select up
7289 atoms, 4536 bonds, 926 residues, 5 models selected
> select up
7291 atoms, 4542 bonds, 926 residues, 5 models selected
> select up
9429 atoms, 9578 bonds, 1204 residues, 5 models selected
> select up
12915 atoms, 13147 bonds, 1652 residues, 5 models selected
> select up
13060 atoms, 13293 bonds, 1672 residues, 5 models selected
> select up
14667 atoms, 14924 bonds, 1876 residues, 5 models selected
> select up
14673 atoms, 14929 bonds, 1877 residues, 5 models selected
> select up
15174 atoms, 15437 bonds, 1940 residues, 5 models selected
> delete sel
Drag select of 35 atoms, 36 bonds
Drag select of 72 atoms, 8 residues, 72 bonds
Drag select of 92 atoms, 93 bonds, 37 residues
> select up
561 atoms, 557 bonds, 72 residues, 5 models selected
> select up
598 atoms, 601 bonds, 72 residues, 5 models selected
> select up
658 atoms, 664 bonds, 81 residues, 5 models selected
> select up
1137 atoms, 1152 bonds, 141 residues, 5 models selected
> delete sel
> show #!283 models
> hide #!284 models
> hide #!285 models
> hide #!286 models
> hide #!287 models
> hide #!288 models
> hide #!283 models
> show #!283 models
> close #283
> show #!163 models
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> hide #!165 models
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> hide #!163 models
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> hide #!187 models
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> show #!192 models
Drag select of 343 atoms, 459 residues, 281 bonds
> select up
3569 atoms, 3589 bonds, 477 residues, 5 models selected
> select up
3591 atoms, 3612 bonds, 477 residues, 5 models selected
> select up
5391 atoms, 5460 bonds, 705 residues, 5 models selected
> select up
8863 atoms, 9002 bonds, 1144 residues, 5 models selected
> delete sel
> hide #!188 models
> show #!188 models
Drag select of 184 atoms, 196 bonds, 16 residues
> select up
294 atoms, 305 bonds, 29 residues, 5 models selected
> select up
637 atoms, 656 bonds, 70 residues, 5 models selected
> select up
649 atoms, 669 bonds, 72 residues, 5 models selected
> delete sel
> show #!187 models
> hide #!188 models
> hide #!189 models
> hide #!190 models
> show #!193 models
> hide #!192 models
> hide #!191 models
> hide #!187 models
> show #!194 models
> show #!195 models
> show #!196 models
> show #!197 models
Drag select of 1748 atoms, 346 residues, 1375 bonds
Drag select of 669 atoms, 500 residues, 537 bonds
> select up
6858 atoms, 6735 bonds, 1009 residues, 5 models selected
> select up
6992 atoms, 6887 bonds, 1009 residues, 5 models selected
> select up
9830 atoms, 9841 bonds, 1371 residues, 5 models selected
> select up
13366 atoms, 13452 bonds, 1825 residues, 5 models selected
> delete sel
Drag select of 69 atoms, 10 residues, 45 bonds
> select up
99 atoms, 84 bonds, 25 residues, 1 model selected
> select up
128 atoms, 84 bonds, 54 residues, 1 model selected
> select up
2129 atoms, 1995 bonds, 413 residues, 1 model selected
> select down
128 atoms, 84 bonds, 54 residues, 1 model selected
> select down
99 atoms, 84 bonds, 25 residues, 1 model selected
> select clear
> show #!192 models
> hide #!192 models
> show #!198 models
> hide #!197 models
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> show #!199 models
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> show #!204 models
Drag select of 549 atoms, 1141 residues, 491 bonds
> select up
8941 atoms, 9035 bonds, 1159 residues, 7 models selected
> select up
8943 atoms, 9038 bonds, 1159 residues, 7 models selected
> select up
12738 atoms, 12941 bonds, 1636 residues, 7 models selected
> select up
13219 atoms, 13440 bonds, 1709 residues, 7 models selected
> delete sel
> show #!205 models
> hide #!204 models
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> show #206 models
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> hide #206 models
> show #206 models
> close #206
> show #!207 models
> show #!208 models
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> show #!212 models
Drag select of 246 atoms, 389 residues, 197 bonds
> select up
3099 atoms, 3127 bonds, 401 residues, 6 models selected
> select up
3191 atoms, 3228 bonds, 401 residues, 6 models selected
> select up
4892 atoms, 4979 bonds, 618 residues, 6 models selected
> select up
7419 atoms, 7560 bonds, 948 residues, 6 models selected
> select up
7501 atoms, 7637 bonds, 961 residues, 6 models selected
> delete sel
Drag select of 147 atoms, 87 residues, 151 bonds
> select up
734 atoms, 740 bonds, 91 residues, 6 models selected
> select up
1787 atoms, 1815 bonds, 212 residues, 6 models selected
> select up
3222 atoms, 3268 bonds, 399 residues, 6 models selected
> delete sel
> show #!213 models
> hide #!212 models
> hide #!210 models
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Drag select of 868 atoms, 1195 residues, 744 bonds
> select up
9369 atoms, 9464 bonds, 1220 residues, 6 models selected
> select up
9370 atoms, 9465 bonds, 1220 residues, 6 models selected
> select up
11036 atoms, 11211 bonds, 1423 residues, 6 models selected
> delete sel
> show #!219 models
> hide #!218 models
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> show #!220 models
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Drag select of 904 atoms, 2063 residues, 796 bonds
> select up
16034 atoms, 16276 bonds, 2087 residues, 9 models selected
> select up
17159 atoms, 17446 bonds, 2219 residues, 9 models selected
> delete sel
> show #!228 models
> hide #!227 models
> hide #!226 models
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Drag select of 843 atoms, 1814 residues, 782 bonds
> select up
14409 atoms, 14571 bonds, 1841 residues, 10 models selected
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14444 atoms, 14611 bonds, 1841 residues, 10 models selected
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18695 atoms, 19015 bonds, 2378 residues, 10 models selected
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19366 atoms, 19714 bonds, 2468 residues, 10 models selected
> delete sel
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Drag select of 98 atoms, 497 residues, 86 bonds
Drag select of 639 atoms, 1535 residues, 571 bonds
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16155 atoms, 16246 bonds, 2069 residues, 14 models selected
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16344 atoms, 16476 bonds, 2069 residues, 14 models selected
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25728 atoms, 26168 bonds, 3254 residues, 14 models selected
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33814 atoms, 34421 bonds, 4308 residues, 14 models selected
> delete sel
> save
> /Users/lmillervedam/Documents/Budapest_LMV/Bteam_sessions/esr1_pdbs_singlechains_H12poses_v3.cxs
===== Log before crash end =====
OpenGL version: 4.1 Metal - 76.3
OpenGL renderer: Apple M1 Pro
OpenGL vendor: Apple
Python: 3.9.11
Locale: UTF-8
Qt version: PyQt6 6.3.1, Qt 6.3.1
Qt runtime version: 6.3.1
Qt platform: cocoa
Hardware:
Hardware Overview:
Model Name: MacBook Pro
Model Identifier: MacBookPro18,1
Processor Name: Unknown
Processor Speed: 2.4 GHz
Number of Processors: 1
Total Number of Cores: 10
L2 Cache: 20 MB
Memory: 32 GB
Software:
System Software Overview:
System Version: macOS 12.1 (21C52)
Kernel Version: Darwin 21.2.0
Time since boot: 1 day 5:12
Graphics/Displays:
Apple G13X:
Chipset Model: Apple G13X
Type: GPU
Bus: Built-In
Total Number of Cores: 16
Vendor: Apple (0x106b)
Metal Family: Supported, Metal GPUFamily Apple 7
Displays:
DELL U3419W:
Resolution: 3440 x 1440 (UWQHD - Ultra-Wide Quad HD)
UI Looks like: 3440 x 1440 @ 60.00Hz
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: Yes
Display Asleep: Yes
Installed Packages:
alabaster: 0.7.12
appdirs: 1.4.4
appnope: 0.1.3
asttokens: 2.0.5
Babel: 2.10.3
backcall: 0.2.0
blockdiag: 3.0.0
build: 0.7.0
certifi: 2021.10.8
cftime: 1.6.1
charset-normalizer: 2.0.12
ChimeraX-AddCharge: 1.2.3
ChimeraX-AddH: 2.1.11
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2.1
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.5.1
ChimeraX-AlphaFold: 1.0
ChimeraX-AltlocExplorer: 1.0.2
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.39.6
ChimeraX-AtomicLibrary: 7.0
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.1
ChimeraX-BasicActions: 1.1.1
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.1.1
ChimeraX-BondRot: 2.0
ChimeraX-BugReporter: 1.0
ChimeraX-BuildStructure: 2.7
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.2
ChimeraX-ButtonPanel: 1.0
ChimeraX-CageBuilder: 1.0
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.2
ChimeraX-CheckWaters: 1.0
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.2.4
ChimeraX-ColorActions: 1.0
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.2
ChimeraX-CommandLine: 1.2.3
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0
ChimeraX-Core: 1.5.dev202207070159
ChimeraX-CoreFormats: 1.1
ChimeraX-coulombic: 1.3.2
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0
ChimeraX-DataFormats: 1.2.2
ChimeraX-Dicom: 1.1
ChimeraX-DistMonitor: 1.1.6
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0
ChimeraX-FunctionKey: 1.0
ChimeraX-Geometry: 1.2
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1
ChimeraX-Hbonds: 2.2.1
ChimeraX-Help: 1.2
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ItemsInspection: 1.0
ChimeraX-Label: 1.1.1
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.5
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.1
ChimeraX-Map: 1.1
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1
ChimeraX-Markers: 1.0
ChimeraX-Mask: 1.0
ChimeraX-MatchMaker: 2.0.6
ChimeraX-MDcrds: 2.6
ChimeraX-MedicalToolbar: 1.0.1
ChimeraX-Meeting: 1.0
ChimeraX-MLP: 1.1
ChimeraX-mmCIF: 2.7
ChimeraX-MMTF: 2.1
ChimeraX-Modeller: 1.5.6
ChimeraX-ModelPanel: 1.3.4
ChimeraX-ModelSeries: 1.0
ChimeraX-Mol2: 2.0
ChimeraX-Morph: 1.0
ChimeraX-MouseModes: 1.1
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0.2
ChimeraX-OpenCommand: 1.9
ChimeraX-PDB: 2.6.6
ChimeraX-PDBBio: 1.0
ChimeraX-PDBLibrary: 1.0.2
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1
ChimeraX-PubChem: 2.1
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-RenumberResidues: 1.1
ChimeraX-ResidueFit: 1.0
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0.1
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5.1
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.7.1
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0
ChimeraX-Shortcuts: 1.1
ChimeraX-ShowAttr: 1.0
ChimeraX-ShowSequences: 1.0
ChimeraX-SideView: 1.0
ChimeraX-Smiles: 2.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.8
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.0.1
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0
ChimeraX-SwapRes: 2.1.1
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.1.1
ChimeraX-ToolshedUtils: 1.2.1
ChimeraX-Tug: 1.0
ChimeraX-UI: 1.21.1
ChimeraX-uniprot: 2.2.1
ChimeraX-UnitCell: 1.0
ChimeraX-ViewDockX: 1.1.2
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0
ChimeraX-WebServices: 1.1.0
ChimeraX-Zone: 1.0
colorama: 0.4.4
cxservices: 1.2
cycler: 0.11.0
Cython: 0.29.26
debugpy: 1.6.1
decorator: 5.1.1
docutils: 0.17.1
entrypoints: 0.4
executing: 0.8.3
filelock: 3.4.2
fonttools: 4.34.2
funcparserlib: 1.0.0
grako: 3.16.5
h5py: 3.7.0
html2text: 2020.1.16
idna: 3.3
ihm: 0.27
imagecodecs: 2022.2.22
imagesize: 1.4.1
ipykernel: 6.15.0
ipython: 8.4.0
ipython-genutils: 0.2.0
jedi: 0.18.1
Jinja2: 3.0.3
jupyter-client: 7.3.4
jupyter-core: 4.10.0
kiwisolver: 1.4.3
line-profiler: 3.4.0
lxml: 4.7.1
lz4: 3.1.10
MarkupSafe: 2.1.1
matplotlib: 3.5.1
matplotlib-inline: 0.1.3
msgpack: 1.0.3
nest-asyncio: 1.5.5
netCDF4: 1.6.0
networkx: 2.6.3
numexpr: 2.8.3
numpy: 1.22.1
openvr: 1.16.802
packaging: 21.0
ParmEd: 3.4.3
parso: 0.8.3
pep517: 0.12.0
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 9.0.1
pip: 21.3.1
pkginfo: 1.8.2
prompt-toolkit: 3.0.30
psutil: 5.9.0
ptyprocess: 0.7.0
pure-eval: 0.2.2
pycollada: 0.7.2
pydicom: 2.2.2
Pygments: 2.11.2
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 3.0.9
PyQt6-commercial: 6.3.1
PyQt6-Qt6: 6.3.1
PyQt6-sip: 13.4.0
PyQt6-WebEngine-commercial: 6.3.1
PyQt6-WebEngine-Qt6: 6.3.1
python-dateutil: 2.8.2
pytz: 2022.1
pyzmq: 23.2.0
qtconsole: 5.3.1
QtPy: 2.1.0
RandomWords: 0.3.0
requests: 2.27.1
scipy: 1.7.3
setuptools: 62.6.0
sfftk-rw: 0.7.2
six: 1.16.0
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
Sphinx: 4.3.2
sphinx-autodoc-typehints: 1.15.2
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 2.0.0
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.5
stack-data: 0.3.0
tables: 3.7.0
tifffile: 2021.11.2
tinyarray: 1.2.4
tomli: 2.0.1
tornado: 6.2
traitlets: 5.3.0
urllib3: 1.26.9
wcwidth: 0.2.5
webcolors: 1.11.1
wheel: 0.37.1
wheel-filename: 1.3.0
Change History (2)
comment:1 by , 3 years ago
| Cc: | added |
|---|---|
| Component: | Unassigned → Sessions |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → accepted |
| Summary: | ChimeraX bug report submission → Crash saving atomic session state |
comment:2 by , 3 years ago
| Resolution: | → duplicate |
|---|---|
| Status: | accepted → closed |
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Basically the same as #7247, though this time using 26.4 GB.