Opened 3 years ago

Closed 3 years ago

#7239 closed enhancement (fixed)

Log link to associated EMDB entry when PDB model opened

Reported by: Tom Goddard Owned by: Tom Goddard
Priority: moderate Milestone:
Component: Input/Output Version:
Keywords: Cc: phil.cruz@…, Elaine Meng
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description

Would be useful when opening a PDB model that was solved from a map in the EM Databank to log a link to that map that will open the map in ChimeraX.

Phil Cruz asked how to get the EMDB id from mmCIF files for the NIH 3D pipeline and said the id was listed in possibly 4 different mmCIF tables.

Attachments (1)

metadata.png (265.5 KB ) - added by Tom Goddard 3 years ago.
Logged metadata for mmCIF entry 6n30.

Download all attachments as: .zip

Change History (4)

by Tom Goddard, 3 years ago

Attachment: metadata.png added

Logged metadata for mmCIF entry 6n30.

comment:1 by Tom Goddard, 3 years ago

Done.

Opening an mmCIF file logs the title and a "more data..." link that shows a table of data, now including links to an EMDB entry and a link to load the map (see attached image).

comment:2 by Tom Goddard, 3 years ago

Cc: Elaine Meng added

comment:3 by Tom Goddard, 3 years ago

Resolution: fixed
Status: assignedclosed
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