Opened 3 years ago

Closed 3 years ago

#7062 closed defect (can't reproduce)

Crash dragging/dropping on color panel

Reported by: chimerax-bug-report@… Owned by: Eric Pettersen
Priority: normal Milestone:
Component: Window Toolkit Version:
Keywords: Cc: Tom Goddard
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description

The following bug report has been submitted:
Platform:        macOS-10.16-x86_64-i386-64bit
ChimeraX Version: 1.3 (2021-12-08 23:08:33 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Fatal Python error: Aborted

Current thread 0x000000011b3d7600 (most recent call first):
  File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/ui/gui.py", line 301 in event_loop
  File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/ChimeraX_main.py", line 867 in init
  File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/ChimeraX_main.py", line 1018 in 
  File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 87 in _run_code
  File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 197 in _run_module_as_main


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{
  "uptime" : 1100000,
  "procLaunch" : "2022-06-09 17:18:17.8751 +0200",
  "procRole" : "Foreground",
  "version" : 2,
  "userID" : 503,
  "deployVersion" : 210,
  "modelCode" : "MacBookPro14,1",
  "procStartAbsTime" : 1176291497205058,
  "coalitionID" : 41415,
  "osVersion" : {
    "train" : "macOS 12.2",
    "build" : "21D49",
    "releaseType" : "User"
  },
  "captureTime" : "2022-06-09 21:38:12.8652 +0200",
  "incident" : "749E5FE4-B588-4815-AF2A-FFFB8DAEAB13",
  "bug_type" : "309",
  "pid" : 45135,
  "procExitAbsTime" : 1188872163251517,
  "cpuType" : "X86-64",
  "procName" : "ChimeraX",
  "procPath" : "\/Applications\/ChimeraX-1.3.app\/Contents\/MacOS\/ChimeraX",
  "bundleInfo" : {"CFBundleShortVersionString":"1.3.0","CFBundleVersion":"1.3.0.0","CFBundleIdentifier":"edu.ucsf.cgl.ChimeraX"},
  "storeInfo" : {"deviceIdentifierForVendor":"3EFF0F36-242D-538F-BB46-15E783C93268","thirdParty":true},
  "parentProc" : "launchd",
  "parentPid" : 1,
  "coalitionName" : "edu.ucsf.cgl.ChimeraX",
  "crashReporterKey" : "7703BCE9-0D0F-4F00-244C-E210C216168A",
  "wakeTime" : 11915,
  "sleepWakeUUID" : "F2E5102F-72D3-4CE4-BB48-2F8D576E488A",
  "sip" : "enabled",
  "isCorpse" : 1,
  "exception" : {"codes":"0x0000000000000000, 0x0000000000000000","rawCodes":[0,0],"type":"EXC_CRASH","signal":"SIGABRT"},
  "asi" : {"libsystem_c.dylib":["Assertion failed: (backingScaleFactor > 0.f), function drawnFocusRingBitmapForTime, file NSAutomaticFocusRing.m, line 346."]},
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  "faultingThread" : 0,
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===== Log before crash start =====
UCSF ChimeraX version: 1.3 (2021-12-08)  
© 2016-2021 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open /Users/lalitha.veleti/Downloads/TFIP11_processing/TFIP11_5A.mrc format
> mrc

Opened TFIP11_5A.mrc as #1, grid size 256,256,256, pixel 2.21, shown at level
1.56, step 1, values float32  

> open "/Volumes/plaschka/lalitha.veleti/Structures /human ILS after
> Prp43.cif" format mmcif

human ILS after Prp43.cif title:  
Cryo-EM structure of a human intron lariat spliceosome after Prp43 loaded
(ILS2 complex) at 2.9 angstrom resolution [more info...]  
  
Chain information for human ILS after Prp43.cif #2  
---  
Chain | Description | UniProt  
A | Pre-mRNA-processing-splicing factor 8 | PRP8_HUMAN  
B | U5snRNA |  
C | 116 kDa U5 small nuclear ribonucleoprotein component | U5S1_HUMAN  
E | U5 small nuclear ribonucleoprotein 40 kDa protein | SNR40_HUMAN  
F | U6snRNA |  
G | pre-mRNA |  
H | U2snRNA |  
I | Pre-mRNA-splicing factor SYF1 | SYF1_HUMAN  
J | Crooked neck-like protein 1 | CRNL1_HUMAN  
K | Pre-mRNA-splicing factor SPF27 | SPF27_HUMAN  
L | Cell division cycle 5-like protein | CDC5L_HUMAN  
M | Pre-mRNA-splicing factor SYF2 | SYF2_HUMAN  
N | Protein BUD31 homolog | BUD31_HUMAN  
O | Pre-mRNA-splicing factor RBM22 | RBM22_HUMAN  
P | Spliceosome-associated protein CWC15 homolog | CWC15_HUMAN  
Q | RNA helicase aquarius | AQR_HUMAN  
R | SNW domain-containing protein 1 | SNW1_HUMAN  
S | Peptidyl-prolyl cis-trans isomerase-like 1 | PPIL1_HUMAN  
T | Pleiotropic regulator 1 | PLRG1_HUMAN  
U | CWF19-like protein 2 | C19L2_HUMAN  
V | Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 | DHX15_HUMAN  
W | Pre-mRNA-processing factor 17 | PRP17_HUMAN  
a h | Small nuclear ribonucleoprotein Sm D3 | SMD3_HUMAN  
b i | Small nuclear ribonucleoprotein-associated protein | Q66K91_HUMAN  
c j | Small nuclear ribonucleoprotein Sm D1 | SMD1_HUMAN  
d k | Small nuclear ribonucleoprotein Sm D2 | SMD2_HUMAN  
e l | Small nuclear ribonucleoprotein E | RUXE_HUMAN  
f m | Small nuclear ribonucleoprotein F | RUXF_HUMAN  
g n | Small nuclear ribonucleoprotein G | RUXG_HUMAN  
o | U2 small nuclear ribonucleoprotein A' | RU2A_HUMAN  
p | U2 small nuclear ribonucleoprotein B'' | RU2B_HUMAN  
q r s t | Pre-mRNA-processing factor 19 | PRP19_HUMAN  
y | Peptidyl-prolyl cis-trans isomerase E | PPIE_HUMAN  
  
Non-standard residues in human ILS after Prp43.cif #2  
---  
GTP — guanosine-5'-triphosphate  
IHP — inositol hexakisphosphate (myo-inositol hexakisphosphate; inositol
1,2,3,4,5,6-hexakisphosphate)  
MG — magnesium ion  
ZN — zinc ion  
  

> show cartoons

> hide atoms

> fitmap #2 inMap #1

Fit molecule human ILS after Prp43.cif (#2) to map TFIP11_5A.mrc (#1) using
79882 atoms  
average map value = 1.314, steps = 380  
shifted from previous position = 27.1  
rotated from previous position = 54.3 degrees  
atoms outside contour = 51630, contour level = 1.5628  
  
Position of human ILS after Prp43.cif (#2) relative to TFIP11_5A.mrc (#1)
coordinates:  
Matrix rotation and translation  
0.77742705 0.39558016 -0.48900258 111.12272291  
-0.61412929 0.64531687 -0.45432516 381.25908430  
0.13583959 0.65351548 0.74462415 -143.82919598  
Axis 0.68218394 -0.38476409 -0.62175692  
Axis point 0.00000000 411.09735888 533.94047189  
Rotation angle (degrees) 54.28992278  
Shift along axis 18.53813001  
  

> fitmap #2 inMap #1

Fit molecule human ILS after Prp43.cif (#2) to map TFIP11_5A.mrc (#1) using
79882 atoms  
average map value = 1.314, steps = 44  
shifted from previous position = 0.00201  
rotated from previous position = 0.00838 degrees  
atoms outside contour = 51630, contour level = 1.5628  
  
Position of human ILS after Prp43.cif (#2) relative to TFIP11_5A.mrc (#1)
coordinates:  
Matrix rotation and translation  
0.77739563 0.39568992 -0.48896372 111.09015084  
-0.61419689 0.64523402 -0.45435146 381.30594875  
0.13571374 0.65353084 0.74463362 -143.80287054  
Axis 0.68217795 -0.38464482 -0.62183728  
Axis point 0.00000000 411.04926491 533.97022142  
Rotation angle (degrees) 54.29362014  
Shift along axis 18.53787762  
  

> select #2

79882 atoms, 81847 bonds, 319 pseudobonds, 11135 residues, 4 models selected  

> ui mousemode right "rotate selected models"

> view matrix models
> #2,0.066878,0.116,0.99099,-20.13,0.84948,0.51436,-0.11754,-72.953,-0.52337,0.84969,-0.064143,201.38

> view matrix models
> #2,0.38295,0.11183,0.91698,-85.233,0.8753,0.27338,-0.39888,52.588,-0.29529,0.95538,0.0068047,95.289

> ui mousemode right "translate selected models"

> view matrix models
> #2,0.38295,0.11183,0.91698,-94.894,0.8753,0.27338,-0.39888,40.73,-0.29529,0.95538,0.0068047,141.47

> view matrix models
> #2,0.38295,0.11183,0.91698,-93.085,0.8753,0.27338,-0.39888,47.438,-0.29529,0.95538,0.0068047,147.02

> ui mousemode right "rotate selected models"

> view matrix models
> #2,0.14753,0.15915,0.97617,-56.336,0.92429,0.3291,-0.19334,-33.634,-0.35202,0.93079,-0.098548,196.19

> fitmap #2 inMap #1

Fit molecule human ILS after Prp43.cif (#2) to map TFIP11_5A.mrc (#1) using
79882 atoms  
average map value = 1.317, steps = 176  
shifted from previous position = 51.5  
rotated from previous position = 14.3 degrees  
atoms outside contour = 54199, contour level = 1.5628  
  
Position of human ILS after Prp43.cif (#2) relative to TFIP11_5A.mrc (#1)
coordinates:  
Matrix rotation and translation  
0.00620939 0.29314563 0.95604764 -36.56933877  
0.86334505 0.48084556 -0.15304532 -32.93618289  
-0.50457583 0.82634931 -0.25010007 267.92271931  
Axis 0.52976932 0.79007325 0.30842946  
Axis point 101.34174586 0.00000000 164.22863349  
Rotation angle (degrees) 112.42802563  
Shift along axis 37.23994912  
  

> fitmap #2 inMap #1

Fit molecule human ILS after Prp43.cif (#2) to map TFIP11_5A.mrc (#1) using
79882 atoms  
average map value = 1.317, steps = 48  
shifted from previous position = 0.0423  
rotated from previous position = 0.0141 degrees  
atoms outside contour = 54199, contour level = 1.5628  
  
Position of human ILS after Prp43.cif (#2) relative to TFIP11_5A.mrc (#1)
coordinates:  
Matrix rotation and translation  
0.00631304 0.29335660 0.95598225 -36.63023264  
0.86332615 0.48081553 -0.15324617 -32.90815258  
-0.50460688 0.82629192 -0.25022701 267.96168944  
Axis 0.52985323 0.79006408 0.30830879  
Axis point 101.32438661 0.00000000 164.25939990  
Rotation angle (degrees) 112.42967808  
Shift along axis 37.20674840  
  

> fitmap #2 inMap #1

Fit molecule human ILS after Prp43.cif (#2) to map TFIP11_5A.mrc (#1) using
79882 atoms  
average map value = 1.317, steps = 28  
shifted from previous position = 0.0352  
rotated from previous position = 0.0126 degrees  
atoms outside contour = 54200, contour level = 1.5628  
  
Position of human ILS after Prp43.cif (#2) relative to TFIP11_5A.mrc (#1)
coordinates:  
Matrix rotation and translation  
0.00623673 0.29316066 0.95604285 -36.57664899  
0.86333228 0.48085690 -0.15308174 -32.93201142  
-0.50459734 0.82633738 -0.25009609 267.92647446  
Axis 0.52977752 0.79007477 0.30841148  
Axis point 101.34181612 0.00000000 164.23205516  
Rotation angle (degrees) 112.42670327  
Shift along axis 37.23536386  
  

> view matrix models
> #2,0.5411,-0.13922,0.82936,-43.734,0.77788,0.4576,-0.4307,69.249,-0.31955,0.87819,0.35591,45.015

> ui mousemode right "translate selected models"

> view matrix models
> #2,0.5411,-0.13922,0.82936,-85.339,0.77788,0.4576,-0.4307,37.4,-0.31955,0.87819,0.35591,81.364

> ui mousemode right "rotate selected models"

> view matrix models
> #2,-0.89492,0.20913,-0.39418,543.4,-0.074674,0.80073,0.59436,-85.32,0.43993,0.56134,-0.70097,231.39

> fitmap #2 inMap #1

Fit molecule human ILS after Prp43.cif (#2) to map TFIP11_5A.mrc (#1) using
79882 atoms  
average map value = 1.285, steps = 320  
shifted from previous position = 56.1  
rotated from previous position = 39 degrees  
atoms outside contour = 54788, contour level = 1.5628  
  
Position of human ILS after Prp43.cif (#2) relative to TFIP11_5A.mrc (#1)
coordinates:  
Matrix rotation and translation  
-0.50938809 0.53660839 -0.67273711 474.63467490  
-0.31891401 0.60837986 0.72675154 19.08493675  
0.79926068 0.58474387 -0.13876952 -43.22364971  
Axis -0.08311990 -0.86158942 -0.50075418  
Axis point 256.08875626 0.00000000 126.72179755  
Rotation angle (degrees) 121.32479763  
Shift along axis -34.25054438  
  

> view matrix models
> #2,0.3334,-0.091569,0.93833,-28.237,0.93204,0.18182,-0.31342,57.935,-0.14191,0.97906,0.14597,41.475

> view matrix models
> #2,0.57456,-0.36648,0.73182,27.328,0.81846,0.25748,-0.51364,123.41,-0.00019011,0.89409,0.44789,-56.272

> view matrix models
> #2,0.52474,0.4377,0.73011,-152.77,0.61026,0.40454,-0.68112,188.65,-0.59349,0.80297,-0.054828,259.47

> ui mousemode right "translate selected models"

> view matrix models
> #2,0.52474,0.4377,0.73011,-179.27,0.61026,0.40454,-0.68112,130.99,-0.59349,0.80297,-0.054828,270.95

> ui mousemode right "rotate selected models"

> view matrix models
> #2,0.2247,0.77138,0.59539,-142.83,0.86047,0.12965,-0.49273,79.678,-0.45727,0.62303,-0.63461,430.75

> ui mousemode right "translate selected models"

> ui mousemode right "rotate selected models"

> view matrix models
> #2,-0.21234,-0.11406,0.97052,90.12,0.76499,0.59856,0.23772,-200.73,-0.60803,0.79292,-0.039838,273.35

> ui mousemode right "translate selected models"

> view matrix models
> #2,-0.21234,-0.11406,0.97052,84.617,0.76499,0.59856,0.23772,-142.04,-0.60803,0.79292,-0.039838,299.93

> fitmap #2 inMap #1

Fit molecule human ILS after Prp43.cif (#2) to map TFIP11_5A.mrc (#1) using
79882 atoms  
average map value = 1.317, steps = 216  
shifted from previous position = 47.3  
rotated from previous position = 8.97 degrees  
atoms outside contour = 54455, contour level = 1.5628  
  
Position of human ILS after Prp43.cif (#2) relative to TFIP11_5A.mrc (#1)
coordinates:  
Matrix rotation and translation  
-0.19947407 -0.16215914 0.96639252 115.19291891  
0.84381790 0.47296005 0.25353527 -111.18371617  
-0.49817812 0.86603303 0.04248952 194.22548535  
Axis 0.32590225 0.77927938 0.53526757  
Axis point 154.91224400 0.00000000 91.57732661  
Rotation angle (degrees) 109.99951871  
Shift along axis 54.86105834  
  

> ui mousemode right "rotate selected models"

> ui mousemode right "translate selected models"

> view matrix models
> #2,-0.19947,-0.16216,0.96639,110.75,0.84382,0.47296,0.25354,-113.88,-0.49818,0.86603,0.04249,195.77

> view matrix models
> #2,-0.19947,-0.16216,0.96639,106.95,0.84382,0.47296,0.25354,-131.33,-0.49818,0.86603,0.04249,211.98

> fitmap #2 inMap #1

Fit molecule human ILS after Prp43.cif (#2) to map TFIP11_5A.mrc (#1) using
79882 atoms  
average map value = 1.324, steps = 136  
shifted from previous position = 29.9  
rotated from previous position = 5.62 degrees  
atoms outside contour = 54828, contour level = 1.5628  
  
Position of human ILS after Prp43.cif (#2) relative to TFIP11_5A.mrc (#1)
coordinates:  
Matrix rotation and translation  
-0.23962239 -0.09997002 0.96570550 113.98354409  
0.87202882 0.41509501 0.25934893 -107.08340352  
-0.42678666 0.90426883 -0.01228932 177.58577151  
Axis 0.35503083 0.76657215 0.53508901  
Axis point 144.02478648 0.00000000 86.47887427  
Rotation angle (degrees) 114.73414037  
Shift along axis 53.40471104  
  

> ~select #2

Nothing selected  

> volume #1 color #b2b2b24e

> volume #1 color #b2b2b277

> lighting soft

> select #1

2 models selected  

> view matrix models #1,1,0,0,-8.7605,0,1,0,73.52,0,0,1,-106.51

> undo

> select #2

79882 atoms, 81847 bonds, 319 pseudobonds, 11135 residues, 4 models selected  

> view matrix models
> #2,-0.23962,-0.09997,0.96571,112.5,0.87203,0.4151,0.25935,-91.855,-0.42679,0.90427,-0.012289,156.5

> view matrix models
> #2,-0.23962,-0.09997,0.96571,108.45,0.87203,0.4151,0.25935,6.3365,-0.42679,0.90427,-0.012289,36.619

> undo

> ui mousemode right "rotate selected models"

> view matrix models
> #2,0.81247,0.50233,-0.2959,15.542,-0.52073,0.8535,0.019146,243.42,0.26217,0.13853,0.95503,-101.26

> view matrix models
> #2,0.034956,0.77476,0.63128,-84.585,-0.49688,0.56154,-0.66165,487.42,-0.86712,-0.29054,0.40459,453.95

> view matrix models
> #2,0.73663,0.38133,-0.55853,134.74,-0.072194,0.86549,0.49569,-7.0658,0.67243,-0.32482,0.66508,-24.003

> view matrix models
> #2,-0.54259,0.56895,-0.61798,451.96,-0.25091,0.59232,0.76563,35.924,0.80165,0.57048,-0.17863,-51.986

> fitmap #2 inMap #1

Fit molecule human ILS after Prp43.cif (#2) to map TFIP11_5A.mrc (#1) using
79882 atoms  
average map value = 1.363, steps = 288  
shifted from previous position = 57.1  
rotated from previous position = 35.6 degrees  
atoms outside contour = 52229, contour level = 1.5628  
  
Position of human ILS after Prp43.cif (#2) relative to TFIP11_5A.mrc (#1)
coordinates:  
Matrix rotation and translation  
-0.05443271 0.52217921 -0.85109694 408.72560722  
-0.61105780 0.65669897 0.44198972 143.97149416  
0.78971229 0.54412811 0.28333580 -159.62669324  
Axis 0.05115294 -0.82174997 -0.56754768  
Axis point 302.78383144 0.00000000 105.52094751  
Rotation angle (degrees) 93.27904903  
Shift along axis -6.80529455  
  

> view matrix models
> #2,-0.032969,0.51345,0.85749,-46.759,-0.97764,0.16172,-0.13442,515.2,-0.20769,-0.84274,0.49664,389.01

> view matrix models
> #2,0.083651,0.91221,0.40109,-53.918,-0.98898,0.12534,-0.0788,512.34,-0.12215,-0.39007,0.91265,146.6

> view matrix models
> #2,-0.040929,0.79139,0.60994,-46.214,-0.85139,-0.34711,0.39325,464.24,0.52293,-0.5032,0.68799,58.424

> view matrix models
> #2,-0.035285,0.6303,0.77555,-52.662,-0.9973,-0.072265,0.013357,537.91,0.064465,-0.77298,0.63115,262.84

> fitmap #2 inMap #1

Fit molecule human ILS after Prp43.cif (#2) to map TFIP11_5A.mrc (#1) using
79882 atoms  
average map value = 2.349, steps = 232  
shifted from previous position = 46.9  
rotated from previous position = 24.3 degrees  
atoms outside contour = 21719, contour level = 1.5628  
  
Position of human ILS after Prp43.cif (#2) relative to TFIP11_5A.mrc (#1)
coordinates:  
Matrix rotation and translation  
0.09586291 0.75056250 0.65380909 -111.68879727  
-0.90245336 -0.21160273 0.37523628 481.41945469  
0.41998607 -0.62600340 0.65706276 151.49861418  
Axis -0.51432837 0.12011291 -0.84914028  
Axis point 123.46798981 306.70264936 0.00000000  
Rotation angle (degrees) 103.25813108  
Shift along axis -13.37416596  
  

> ~select #2

Nothing selected  

> open /Users/lalitha.veleti/Downloads/TFIP11_processing/C.elegans_1mil_3A.mrc

Opened C.elegans_1mil_3A.mrc as #3, grid size 550,550,550, pixel 1.2, shown at
level 0.403, step 4, values float32  

> select #3

2 models selected  

> ui mousemode right "translate selected models"

> view matrix models #3,1,0,0,-476.19,0,1,0,-126.79,0,0,1,-403.6

> view matrix models #3,1,0,0,-662.53,0,1,0,-104.85,0,0,1,-711.56

> volume #3 color #e6ffe1

> volume #3 color #ffdeed

> volume #3 color #f9ffe9

> volume #3 color #ecffed

> volume #3 color #ff8acd

> volume #3 color #f7fff5

> volume #3 color #bdc3bb

> lighting soft

> graphics silhouettes true

> volume #3 step 2

> volume #3 step 1

> volume #3 level 1.258

> ui mousemode right translate

> volume #3 level 1.711

> volume #3 level 1.46

> volume #3

> volume sel style surface

> ~select #3

Nothing selected  

> volume #3 level 1.812

> volume #3 step 2

> volume #3 level 1.359

> volume #3 step 1

> volume #3 level 1

> volume #3 level 2

> volume #3 level 1.5

> volume #3 level 1.2

> volume #3 level 1.02

> lighting soft

> set bgColor white

> hide #!3 models

> color #1 #b2b2b278 models

> volume #1 color #bf95be78

> volume #1 color #7da9bf78

> volume #1 color #7baabf78

> volume #1 color #7db1bf78

> lighting soft

> lighting full

> volume #1 color #7db1bf78


===== Log before crash end =====

Log:
UCSF ChimeraX version: 1.3 (2021-12-08)  
© 2016-2021 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  




OpenGL version: 4.1 INTEL-18.4.6
OpenGL renderer: Intel(R) Iris(TM) Plus Graphics 640
OpenGL vendor: Intel Inc.Hardware:

    Hardware Overview:

      Model Name: MacBook Pro
      Model Identifier: MacBookPro14,1
      Processor Name: Dual-Core Intel Core i5
      Processor Speed: 2,3 GHz
      Number of Processors: 1
      Total Number of Cores: 2
      L2 Cache (per Core): 256 KB
      L3 Cache: 4 MB
      Hyper-Threading Technology: Enabled
      Memory: 16 GB
      System Firmware Version: 447.80.3.0.0
      OS Loader Version: 540.80.2~11
      SMC Version (system): 2.43f11

Software:

    System Software Overview:

      System Version: macOS 12.2 (21D49)
      Kernel Version: Darwin 21.3.0
      Time since boot: 59 days 12:25

Graphics/Displays:

    Intel Iris Plus Graphics 640:

      Chipset Model: Intel Iris Plus Graphics 640
      Type: GPU
      Bus: Built-In
      VRAM (Dynamic, Max): 1536 MB
      Vendor: Intel
      Device ID: 0x5926
      Revision ID: 0x0006
      Metal Family: Supported, Metal GPUFamily macOS 2
      Displays:
        Color LCD:
          Display Type: Built-In Retina LCD
          Resolution: 2560 x 1600 Retina
          Framebuffer Depth: 30-Bit Color (ARGB2101010)
          Main Display: Yes
          Mirror: Off
          Online: Yes
          Automatically Adjust Brightness: Yes
          Connection Type: Internal
        HP ZR2440w:
          Resolution: 1920 x 1200 (WUXGA - Widescreen Ultra eXtended Graphics Array)
          UI Looks like: 1920 x 1200 @ 60.00Hz
          Framebuffer Depth: 30-Bit Color (ARGB2101010)
          Display Serial Number: CNT20302WB  
          Mirror: Off
          Online: Yes
          Rotation: Supported
          Automatically Adjust Brightness: Yes
          Connection Type: DVI or HDMI
          Adapter Firmware Version: 5,05

Locale: (None, 'UTF-8')
PyQt5 5.15.2, Qt 5.15.2
Installed Packages:
    alabaster: 0.7.12
    appdirs: 1.4.4
    appnope: 0.1.2
    Babel: 2.9.1
    backcall: 0.2.0
    blockdiag: 2.0.1
    certifi: 2021.5.30
    cftime: 1.5.1.1
    charset-normalizer: 2.0.9
    ChimeraX-AddCharge: 1.2.2
    ChimeraX-AddH: 2.1.11
    ChimeraX-AlignmentAlgorithms: 2.0
    ChimeraX-AlignmentHdrs: 3.2
    ChimeraX-AlignmentMatrices: 2.0
    ChimeraX-Alignments: 2.2.3
    ChimeraX-AlphaFold: 1.0
    ChimeraX-AltlocExplorer: 1.0.1
    ChimeraX-AmberInfo: 1.0
    ChimeraX-Arrays: 1.0
    ChimeraX-Atomic: 1.31
    ChimeraX-AtomicLibrary: 4.2
    ChimeraX-AtomSearch: 2.0
    ChimeraX-AtomSearchLibrary: 1.0
    ChimeraX-AxesPlanes: 2.0
    ChimeraX-BasicActions: 1.1
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 2.0
    ChimeraX-BondRot: 2.0
    ChimeraX-BugReporter: 1.0
    ChimeraX-BuildStructure: 2.6.1
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.1
    ChimeraX-ButtonPanel: 1.0
    ChimeraX-CageBuilder: 1.0
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.2
    ChimeraX-ChemGroup: 2.0
    ChimeraX-Clashes: 2.2.2
    ChimeraX-Clipper: 0.17.0
    ChimeraX-ColorActions: 1.0
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-ColorKey: 1.5
    ChimeraX-CommandLine: 1.1.5
    ChimeraX-ConnectStructure: 2.0
    ChimeraX-Contacts: 1.0
    ChimeraX-Core: 1.3
    ChimeraX-CoreFormats: 1.1
    ChimeraX-coulombic: 1.3.2
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-CrystalContacts: 1.0
    ChimeraX-DataFormats: 1.2.2
    ChimeraX-Dicom: 1.0
    ChimeraX-DistMonitor: 1.1.5
    ChimeraX-DistUI: 1.0
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ExperimentalCommands: 1.0
    ChimeraX-FileHistory: 1.0
    ChimeraX-FunctionKey: 1.0
    ChimeraX-Geometry: 1.1
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.1
    ChimeraX-Hbonds: 2.1.2
    ChimeraX-Help: 1.2
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.1
    ChimeraX-ImageFormats: 1.2
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0.1
    ChimeraX-ISOLDE: 1.3
    ChimeraX-ItemsInspection: 1.0
    ChimeraX-Label: 1.1
    ChimeraX-ListInfo: 1.1.1
    ChimeraX-Log: 1.1.4
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Maestro: 1.8.1
    ChimeraX-Map: 1.1
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0
    ChimeraX-MapFilter: 2.0
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.1
    ChimeraX-Markers: 1.0
    ChimeraX-Mask: 1.0
    ChimeraX-MatchMaker: 2.0.4
    ChimeraX-MDcrds: 2.6
    ChimeraX-MedicalToolbar: 1.0.1
    ChimeraX-Meeting: 1.0
    ChimeraX-MLP: 1.1
    ChimeraX-mmCIF: 2.4
    ChimeraX-MMTF: 2.1
    ChimeraX-Modeller: 1.2.6
    ChimeraX-ModelPanel: 1.2.1
    ChimeraX-ModelSeries: 1.0
    ChimeraX-Mol2: 2.0
    ChimeraX-Morph: 1.0
    ChimeraX-MouseModes: 1.1
    ChimeraX-Movie: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nucleotides: 2.0.2
    ChimeraX-OpenCommand: 1.7
    ChimeraX-PDB: 2.6.5
    ChimeraX-PDBBio: 1.0
    ChimeraX-PDBLibrary: 1.0.2
    ChimeraX-PDBMatrices: 1.0
    ChimeraX-PickBlobs: 1.0
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.0.1
    ChimeraX-PubChem: 2.1
    ChimeraX-ReadPbonds: 1.0.1
    ChimeraX-Registration: 1.1
    ChimeraX-RemoteControl: 1.0
    ChimeraX-ResidueFit: 1.0
    ChimeraX-RestServer: 1.1
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 2.0.1
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.5
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0
    ChimeraX-SelInspector: 1.0
    ChimeraX-SeqView: 2.4.6
    ChimeraX-Shape: 1.0.1
    ChimeraX-Shell: 1.0
    ChimeraX-Shortcuts: 1.1
    ChimeraX-ShowAttr: 1.0
    ChimeraX-ShowSequences: 1.0
    ChimeraX-SideView: 1.0
    ChimeraX-Smiles: 2.1
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.6.1
    ChimeraX-STL: 1.0
    ChimeraX-Storm: 1.0
    ChimeraX-Struts: 1.0
    ChimeraX-Surface: 1.0
    ChimeraX-SwapAA: 2.0
    ChimeraX-SwapRes: 2.1
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.1
    ChimeraX-ToolshedUtils: 1.2
    ChimeraX-Tug: 1.0
    ChimeraX-UI: 1.13.7
    ChimeraX-uniprot: 2.2
    ChimeraX-UnitCell: 1.0
    ChimeraX-ViewDockX: 1.0.1
    ChimeraX-VIPERdb: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0
    ChimeraX-WebServices: 1.0
    ChimeraX-Zone: 1.0
    colorama: 0.4.4
    cxservices: 1.1
    cycler: 0.11.0
    Cython: 0.29.24
    decorator: 5.1.0
    docutils: 0.17.1
    filelock: 3.0.12
    funcparserlib: 0.3.6
    grako: 3.16.5
    h5py: 3.6.0
    html2text: 2020.1.16
    idna: 3.3
    ihm: 0.21
    imagecodecs: 2021.4.28
    imagesize: 1.3.0
    ipykernel: 5.5.5
    ipython: 7.23.1
    ipython-genutils: 0.2.0
    jedi: 0.18.0
    Jinja2: 3.0.1
    jupyter-client: 6.1.12
    jupyter-core: 4.9.1
    kiwisolver: 1.3.2
    lxml: 4.6.3
    lz4: 3.1.3
    MarkupSafe: 2.0.1
    matplotlib: 3.4.3
    matplotlib-inline: 0.1.3
    msgpack: 1.0.2
    netCDF4: 1.5.7
    networkx: 2.6.3
    numexpr: 2.8.0
    numpy: 1.21.2
    openvr: 1.16.801
    packaging: 21.0
    ParmEd: 3.2.0
    parso: 0.8.3
    pexpect: 4.8.0
    pickleshare: 0.7.5
    Pillow: 8.3.2
    pip: 21.2.4
    pkginfo: 1.7.1
    prompt-toolkit: 3.0.23
    psutil: 5.8.0
    ptyprocess: 0.7.0
    pycollada: 0.7.1
    pydicom: 2.1.2
    Pygments: 2.10.0
    PyOpenGL: 3.1.5
    PyOpenGL-accelerate: 3.1.5
    pyparsing: 3.0.6
    PyQt5-commercial: 5.15.2
    PyQt5-sip: 12.8.1
    PyQtWebEngine-commercial: 5.15.2
    python-dateutil: 2.8.2
    pytz: 2021.3
    pyzmq: 22.3.0
    qtconsole: 5.1.1
    QtPy: 1.11.3
    RandomWords: 0.3.0
    requests: 2.26.0
    scipy: 1.7.1
    setuptools: 57.5.0
    sfftk-rw: 0.7.1
    six: 1.16.0
    snowballstemmer: 2.2.0
    sortedcontainers: 2.4.0
    Sphinx: 4.2.0
    sphinx-autodoc-typehints: 1.12.0
    sphinxcontrib-applehelp: 1.0.2
    sphinxcontrib-blockdiag: 2.0.0
    sphinxcontrib-devhelp: 1.0.2
    sphinxcontrib-htmlhelp: 2.0.0
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 1.0.3
    sphinxcontrib-serializinghtml: 1.1.5
    suds-jurko: 0.6
    tifffile: 2021.4.8
    tinyarray: 1.2.3
    tornado: 6.1
    traitlets: 5.1.1
    urllib3: 1.26.7
    wcwidth: 0.2.5
    webcolors: 1.11.1
    wheel: 0.37.0
    wheel-filename: 1.3.0

Change History (2)

comment:1 by Eric Pettersen, 3 years ago

Cc: Tom Goddard added
Component: UnassignedWindow Toolkit
Owner: set to Eric Pettersen
Platform: all
Project: ChimeraX
Status: newaccepted
Summary: ChimeraX bug report submissionCrash dragging/dropping on color panel

comment:2 by Eric Pettersen, 3 years ago

Resolution: can't reproduce
Status: acceptedclosed
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