Opened 8 years ago

Closed 8 years ago

#673 closed defect (fixed)

slanted tube helix 1www /w:5-9

Reported by: Elaine Meng Owned by: Conrad Huang
Priority: major Milestone:
Component: Depiction Version:
Keywords: Cc:
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description

By "slanted" I mean the tube end faces are not normal to the long axis... image attached.

open 1www
car s modeh tube
view /w:5-9

Attachments (1)

slanted-tube.png (82.7 KB ) - added by Elaine Meng 8 years ago.

Download all attachments as: .zip

Change History (2)

by Elaine Meng, 8 years ago

Attachment: slanted-tube.png added

comment:1 by Conrad Huang, 8 years ago

Resolution: fixed
Status: assignedclosed

Fixed in d12e9ba. The projection of the atom coordinates along the cylinder axis is out of order for the offending helix. Unfortunately, the normal calculation assumes that the order of the projected cylinder centers match the atomic coordinates order. The slant was the result of using the mismatched center/atom coordinates.

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