Crash in event loop

[chimerax-bug-report@…]

The following bug report has been submitted:
Platform:        Windows-10-10.0.22598
ChimeraX Version: 1.4.dev202112100150 (2021-12-10 01:50:56 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Windows fatal exception: code 0x8001010d

Thread 0x00007764 (most recent call first):
  File "C:\Program Files\ChimeraX\bin\lib\multiprocessing\pool.py", line 576 in _handle_results
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 910 in run
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 973 in _bootstrap_inner
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00000644 (most recent call first):
  File "C:\Program Files\ChimeraX\bin\lib\multiprocessing\pool.py", line 528 in _handle_tasks
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 910 in run
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 973 in _bootstrap_inner
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00007dc4 (most recent call first):
  File "C:\Program Files\ChimeraX\bin\lib\multiprocessing\connection.py", line 816 in _exhaustive_wait
  File "C:\Program Files\ChimeraX\bin\lib\multiprocessing\connection.py", line 884 in wait
  File "C:\Program Files\ChimeraX\bin\lib\multiprocessing\pool.py", line 499 in _wait_for_updates
  File "C:\Program Files\ChimeraX\bin\lib\multiprocessing\pool.py", line 519 in _handle_workers
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 910 in run
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 973 in _bootstrap_inner
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x000031b8 (most recent call first):
  File "C:\Program Files\ChimeraX\bin\lib\multiprocessing\pool.py", line 114 in worker
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 910 in run
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 973 in _bootstrap_inner
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00002348 (most recent call first):
  File "C:\Program Files\ChimeraX\bin\lib\multiprocessing\pool.py", line 114 in worker
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 910 in run
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 973 in _bootstrap_inner
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x0000718c (most recent call first):
  File "C:\Program Files\ChimeraX\bin\lib\multiprocessing\pool.py", line 114 in worker
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 910 in run
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 973 in _bootstrap_inner
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00007b4c (most recent call first):
  File "C:\Program Files\ChimeraX\bin\lib\multiprocessing\pool.py", line 114 in worker
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 910 in run
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 973 in _bootstrap_inner
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x000034cc (most recent call first):
  File "C:\Program Files\ChimeraX\bin\lib\multiprocessing\pool.py", line 114 in worker
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 910 in run
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 973 in _bootstrap_inner
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00002480 (most recent call first):
  File "C:\Program Files\ChimeraX\bin\lib\multiprocessing\pool.py", line 114 in worker
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 910 in run
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 973 in _bootstrap_inner
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00007094 (most recent call first):
  File "C:\Program Files\ChimeraX\bin\lib\multiprocessing\pool.py", line 114 in worker
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 910 in run
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 973 in _bootstrap_inner
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00005a24 (most recent call first):
  File "C:\Program Files\ChimeraX\bin\lib\multiprocessing\pool.py", line 114 in worker
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 910 in run
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 973 in _bootstrap_inner
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00006af0 (most recent call first):
  File "C:\Program Files\ChimeraX\bin\lib\multiprocessing\pool.py", line 114 in worker
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 910 in run
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 973 in _bootstrap_inner
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00002fc4 (most recent call first):
  File "C:\Program Files\ChimeraX\bin\lib\multiprocessing\pool.py", line 114 in worker
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 910 in run
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 973 in _bootstrap_inner
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x000014b4 (most recent call first):
  File "C:\Program Files\ChimeraX\bin\lib\multiprocessing\pool.py", line 114 in worker
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 910 in run
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 973 in _bootstrap_inner
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00004b44 (most recent call first):
  File "C:\Program Files\ChimeraX\bin\lib\multiprocessing\pool.py", line 114 in worker
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 910 in run
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 973 in _bootstrap_inner
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00002640 (most recent call first):
  File "C:\Program Files\ChimeraX\bin\lib\multiprocessing\pool.py", line 114 in worker
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 910 in run
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 973 in _bootstrap_inner
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00001014 (most recent call first):
  File "C:\Program Files\ChimeraX\bin\lib\multiprocessing\pool.py", line 114 in worker
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 910 in run
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 973 in _bootstrap_inner
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00000d68 (most recent call first):
  File "C:\Program Files\ChimeraX\bin\lib\multiprocessing\pool.py", line 114 in worker
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 910 in run
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 973 in _bootstrap_inner
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 930 in _bootstrap

Thread 0x00007f1c (most recent call first):
  File "C:\Program Files\ChimeraX\bin\lib\multiprocessing\pool.py", line 114 in worker
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 910 in run
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 973 in _bootstrap_inner
  File "C:\Program Files\ChimeraX\bin\lib\threading.py", line 930 in _bootstrap

Current thread 0x00007b58 (most recent call first):
  File "C:\Program Files\ChimeraX\bin\lib\site-packages\chimerax\ui\gui.py", line 316 in event_loop
  File "C:\Program Files\ChimeraX\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX\bin\lib\runpy.py", line 197 in _run_module_as_main
===== Log before crash start =====
You can double click a model's Name or ID in the model panel to edit those
fields  
UCSF ChimeraX version: 1.4.dev202112100150 (2021-12-10)  
© 2016-2021 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open 6gik

Summary of feedback from opening 6gik fetched from pdb  
---  
note | Fetching compressed mmCIF 6gik from
http://files.rcsb.org/download/6gik.cif  
  
6gik title:  
NMR structure of temporin B L1FK in SDS micelles [more info...]  
  
Chain information for 6gik  
---  
Chain | Description  
1.1/A 1.2/A 1.3/A 1.4/A 1.5/A 1.6/A 1.7/A 1.8/A 1.9/A 1.10/A 1.11/A 1.12/A
1.13/A 1.14/A 1.15/A 1.16/A 1.17/A 1.18/A 1.19/A 1.20/A | temporinB_L1FK  
  

> open 6giq

Summary of feedback from opening 6giq fetched from pdb  
---  
notes | Fetching compressed mmCIF 6giq from
http://files.rcsb.org/download/6giq.cif  
Fetching CCD 6PH from http://ligand-expo.rcsb.org/reports/6/6PH/6PH.cif  
Fetching CCD HEM from http://ligand-expo.rcsb.org/reports/H/HEM/HEM.cif  
Fetching CCD 8PE from http://ligand-expo.rcsb.org/reports/8/8PE/8PE.cif  
Fetching CCD CN5 from http://ligand-expo.rcsb.org/reports/C/CN5/CN5.cif  
Fetching CCD UQ6 from http://ligand-expo.rcsb.org/reports/U/UQ6/UQ6.cif  
Fetching CCD 7PH from http://ligand-expo.rcsb.org/reports/7/7PH/7PH.cif  
Fetching CCD FES from http://ligand-expo.rcsb.org/reports/F/FES/FES.cif  
Fetching CCD PCF from http://ligand-expo.rcsb.org/reports/P/PCF/PCF.cif  
Fetching CCD 9PE from http://ligand-expo.rcsb.org/reports/9/9PE/9PE.cif  
Fetching CCD CN3 from http://ligand-expo.rcsb.org/reports/C/CN3/CN3.cif  
Fetching CCD CU from http://ligand-expo.rcsb.org/reports/C/CU/CU.cif  
Fetching CCD HEA from http://ligand-expo.rcsb.org/reports/H/HEA/HEA.cif  
Fetching CCD CUA from http://ligand-expo.rcsb.org/reports/C/CUA/CUA.cif  
  
6giq title:  
Saccharomyces cerevisiae respiratory supercomplex III2IV [more info...]  
  
Chain information for 6giq #2  
---  
Chain | Description | UniProt  
A L | Cytochrome b-c1 complex subunit 1, mitochondrial | QCR1_YEAST  
B M | Cytochrome b-c1 complex subunit 2, mitochondrial | QCR2_YEAST  
C N | Cytochrome b | CYB_YEAST  
D O | Cytochrome c1, heme protein, mitochondrial | CY1_YEAST  
E P | Cytochrome b-c1 complex subunit Rieske, mitochondrial | UCRI_YEAST  
F Q | Cytochrome b-c1 complex subunit 6 | QCR6_YEAST  
G R | Cytochrome b-c1 complex subunit 7 | QCR7_YEAST  
H S | Cytochrome b-c1 complex subunit 8 | QCR8_YEAST  
I T | Cytochrome b-c1 complex subunit 9 | QCR9_YEAST  
U V | Cytochrome b-c1 complex subunit 10 | QCR10_YEAST  
a | Cytochrome c oxidase subunit 1 | COX1_YEAST  
b | Cytochrome c oxidase subunit 2 | COX2_YEAST  
c | Cytochrome c oxidase subunit 3 | COX3_YEAST  
d | Cytochrome c oxidase subunit 4, mitochondrial | COX4_YEAST  
e | Cytochrome c oxidase polypeptide 5A, mitochondrial | COX5A_YEAST  
f | Cytochrome c oxidase subunit 6, mitochondrial | COX6_YEAST  
g | Cytochrome c oxidase subunit 7 | COX7_YEAST  
h | Cytochrome c oxidase polypeptide VIII, mitochondrial | COX8_YEAST  
i | Cytochrome c oxidase subunit 7A | COX9_YEAST  
j | Cytochrome c oxidase subunit 6B | COX12_YEAST  
k | Cytochrome c oxidase subunit 6A, mitochondrial | COX13_YEAST  
m | Unknown Cox subunit |  
  
Non-standard residues in 6giq #2  
---  
6PH — (1R)-2-(phosphonooxy)-1-[(tridecanoyloxy)methyl]ethyl pentadecanoate
(phosphatidic acid)  
7PH — (1R)-2-(dodecanoyloxy)-1-[(phosphonooxy)methyl]ethyl tetradecanoate
(phosphatidic acid)  
8PE —
(2R)-3-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(tetradecanoyloxy)propyl
octadecanoate (3-Sn-phosphatidylethanolamine)  
9PE —
(1R)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(heptanoyloxy)methyl]ethyl
octadecanoate (3-Sn-phosphatidylethanolamine)  
CN3 —
(2R,5S,11R,14R)-5,8,11-trihydroxy-2-(nonanoyloxy)-5,11-dioxido-16-oxo-14-[(propanoyloxy)methyl]-4,6,10,12,15-pentaoxa-5,11-diphosphanonadec-1-yl
undecanoate (cardiolipin)  
CN5 —
(5S,11R)-5,8,11-trihydroxy-5,11-dioxido-17-oxo-4,6,10,12,16-pentaoxa-5,11-diphosphaoctadec-1-yl
pentadecanoate (cardiolipin)  
CU — copper (II) ion  
CUA — dinuclear copper ion  
FES — FE2/S2 (inorganic) cluster  
HEA — heme-A  
HEM — protoporphyrin IX containing Fe (HEME)  
PCF — 1,2-diacyl-Sn-glycero-3-phoshocholine  
UQ6 — 5-(3,7,11,15,19,23-hexamethyl-
tetracosa-2,6,10,14,18,22-hexaenyl)-2,3-dimethoxy-6-methyl-benzene-1,4-diol  
  

> close

> open 6giq format mmcif fromDatabase pdb

6giq title:  
Saccharomyces cerevisiae respiratory supercomplex III2IV [more info...]  
  
Chain information for 6giq #1  
---  
Chain | Description | UniProt  
A L | Cytochrome b-c1 complex subunit 1, mitochondrial | QCR1_YEAST  
B M | Cytochrome b-c1 complex subunit 2, mitochondrial | QCR2_YEAST  
C N | Cytochrome b | CYB_YEAST  
D O | Cytochrome c1, heme protein, mitochondrial | CY1_YEAST  
E P | Cytochrome b-c1 complex subunit Rieske, mitochondrial | UCRI_YEAST  
F Q | Cytochrome b-c1 complex subunit 6 | QCR6_YEAST  
G R | Cytochrome b-c1 complex subunit 7 | QCR7_YEAST  
H S | Cytochrome b-c1 complex subunit 8 | QCR8_YEAST  
I T | Cytochrome b-c1 complex subunit 9 | QCR9_YEAST  
U V | Cytochrome b-c1 complex subunit 10 | QCR10_YEAST  
a | Cytochrome c oxidase subunit 1 | COX1_YEAST  
b | Cytochrome c oxidase subunit 2 | COX2_YEAST  
c | Cytochrome c oxidase subunit 3 | COX3_YEAST  
d | Cytochrome c oxidase subunit 4, mitochondrial | COX4_YEAST  
e | Cytochrome c oxidase polypeptide 5A, mitochondrial | COX5A_YEAST  
f | Cytochrome c oxidase subunit 6, mitochondrial | COX6_YEAST  
g | Cytochrome c oxidase subunit 7 | COX7_YEAST  
h | Cytochrome c oxidase polypeptide VIII, mitochondrial | COX8_YEAST  
i | Cytochrome c oxidase subunit 7A | COX9_YEAST  
j | Cytochrome c oxidase subunit 6B | COX12_YEAST  
k | Cytochrome c oxidase subunit 6A, mitochondrial | COX13_YEAST  
m | Unknown Cox subunit |  
  
Non-standard residues in 6giq #1  
---  
6PH — (1R)-2-(phosphonooxy)-1-[(tridecanoyloxy)methyl]ethyl pentadecanoate
(phosphatidic acid)  
7PH — (1R)-2-(dodecanoyloxy)-1-[(phosphonooxy)methyl]ethyl tetradecanoate
(phosphatidic acid)  
8PE —
(2R)-3-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(tetradecanoyloxy)propyl
octadecanoate (3-Sn-phosphatidylethanolamine)  
9PE —
(1R)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(heptanoyloxy)methyl]ethyl
octadecanoate (3-Sn-phosphatidylethanolamine)  
CN3 —
(2R,5S,11R,14R)-5,8,11-trihydroxy-2-(nonanoyloxy)-5,11-dioxido-16-oxo-14-[(propanoyloxy)methyl]-4,6,10,12,15-pentaoxa-5,11-diphosphanonadec-1-yl
undecanoate (cardiolipin)  
CN5 —
(5S,11R)-5,8,11-trihydroxy-5,11-dioxido-17-oxo-4,6,10,12,16-pentaoxa-5,11-diphosphaoctadec-1-yl
pentadecanoate (cardiolipin)  
CU — copper (II) ion  
CUA — dinuclear copper ion  
FES — FE2/S2 (inorganic) cluster  
HEA — heme-A  
HEM — protoporphyrin IX containing Fe (HEME)  
PCF — 1,2-diacyl-Sn-glycero-3-phoshocholine  
UQ6 — 5-(3,7,11,15,19,23-hexamethyl-
tetracosa-2,6,10,14,18,22-hexaenyl)-2,3-dimethoxy-6-methyl-benzene-1,4-diol  
  

> lighting soft

> show cartoons

> hide atoms

> select :HEM

258 atoms, 276 bonds, 24 pseudobonds, 6 residues, 2 models selected  

> show sel atoms

> select :UQ6

86 atoms, 86 bonds, 2 residues, 1 model selected  


===== Log before crash end =====

Log:
UCSF ChimeraX version: 1.4.dev202112100150 (2021-12-10)  
© 2016-2021 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  




OpenGL version: 3.3.0 NVIDIA 512.15
OpenGL renderer: NVIDIA GeForce RTX 3070 Laptop GPU/PCIe/SSE2
OpenGL vendor: NVIDIA Corporation
Manufacturer: LENOVO
Model: 82JQ
OS: Microsoft Windows 11 Home (Build 22598)
Memory: 17,024,741,376
MaxProcessMemory: 137,438,953,344
CPU: 16 AMD Ryzen 7 5800H with Radeon Graphics         
OSLanguage: en-US
Locale: ('en_US', 'cp1252')
PyQt5 5.15.2, Qt 5.15.2
Installed Packages:
    alabaster: 0.7.12
    appdirs: 1.4.4
    Babel: 2.9.1
    backcall: 0.2.0
    blockdiag: 2.0.1
    certifi: 2021.10.8
    cftime: 1.5.1.1
    charset-normalizer: 2.0.9
    ChimeraX-AddCharge: 1.2.2
    ChimeraX-AddH: 2.1.11
    ChimeraX-AlignmentAlgorithms: 2.0
    ChimeraX-AlignmentHdrs: 3.2
    ChimeraX-AlignmentMatrices: 2.0
    ChimeraX-Alignments: 2.2.3
    ChimeraX-AlphaFold: 1.0
    ChimeraX-AltlocExplorer: 1.0.1
    ChimeraX-AmberInfo: 1.0
    ChimeraX-Arrays: 1.0
    ChimeraX-Atomic: 1.31.5
    ChimeraX-AtomicLibrary: 5.0
    ChimeraX-AtomSearch: 2.0
    ChimeraX-AtomSearchLibrary: 1.0
    ChimeraX-AxesPlanes: 2.1
    ChimeraX-BasicActions: 1.1
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 2.0
    ChimeraX-BondRot: 2.0
    ChimeraX-BugReporter: 1.0
    ChimeraX-BuildStructure: 2.6.1
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.1
    ChimeraX-ButtonPanel: 1.0
    ChimeraX-CageBuilder: 1.0
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.2
    ChimeraX-ChemGroup: 2.0
    ChimeraX-Clashes: 2.2.2
    ChimeraX-ColorActions: 1.0
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-ColorKey: 1.5
    ChimeraX-CommandLine: 1.1.5
    ChimeraX-ConnectStructure: 2.0
    ChimeraX-Contacts: 1.0
    ChimeraX-Core: 1.4.dev202112100150
    ChimeraX-CoreFormats: 1.1
    ChimeraX-coulombic: 1.3.2
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-CrystalContacts: 1.0
    ChimeraX-DataFormats: 1.2.2
    ChimeraX-Dicom: 1.0
    ChimeraX-DistMonitor: 1.1.5
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ExperimentalCommands: 1.0
    ChimeraX-FileHistory: 1.0
    ChimeraX-FunctionKey: 1.0
    ChimeraX-Geometry: 1.1
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.1
    ChimeraX-Hbonds: 2.1.2
    ChimeraX-Help: 1.2
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.1
    ChimeraX-ImageFormats: 1.2
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0.1
    ChimeraX-ItemsInspection: 1.0
    ChimeraX-Label: 1.1
    ChimeraX-ListInfo: 1.1.1
    ChimeraX-Log: 1.1.5
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Maestro: 1.8.1
    ChimeraX-Map: 1.1
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0
    ChimeraX-MapFilter: 2.0
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.1
    ChimeraX-Markers: 1.0
    ChimeraX-Mask: 1.0
    ChimeraX-MatchMaker: 2.0.4
    ChimeraX-MDcrds: 2.6
    ChimeraX-MedicalToolbar: 1.0.1
    ChimeraX-Meeting: 1.0
    ChimeraX-MLP: 1.1
    ChimeraX-mmCIF: 2.4
    ChimeraX-MMTF: 2.1
    ChimeraX-Modeller: 1.5.1
    ChimeraX-ModelPanel: 1.3.1
    ChimeraX-ModelSeries: 1.0
    ChimeraX-Mol2: 2.0
    ChimeraX-Morph: 1.0
    ChimeraX-MouseModes: 1.1
    ChimeraX-Movie: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nucleotides: 2.0.2
    ChimeraX-OpenCommand: 1.8
    ChimeraX-PDB: 2.6.5
    ChimeraX-PDBBio: 1.0
    ChimeraX-PDBLibrary: 1.0.2
    ChimeraX-PDBMatrices: 1.0
    ChimeraX-PickBlobs: 1.0
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.0.1
    ChimeraX-PubChem: 2.1
    ChimeraX-ReadPbonds: 1.0.1
    ChimeraX-Registration: 1.1
    ChimeraX-RemoteControl: 1.0
    ChimeraX-ResidueFit: 1.0
    ChimeraX-RestServer: 1.1
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 2.0.1
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.5
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0
    ChimeraX-SelInspector: 1.0
    ChimeraX-SeqView: 2.4.6
    ChimeraX-Shape: 1.0.1
    ChimeraX-Shell: 1.0
    ChimeraX-Shortcuts: 1.1
    ChimeraX-ShowAttr: 1.0
    ChimeraX-ShowSequences: 1.0
    ChimeraX-SideView: 1.0
    ChimeraX-Smiles: 2.1
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.6.1
    ChimeraX-STL: 1.0
    ChimeraX-Storm: 1.0
    ChimeraX-StructMeasure: 1.0.1
    ChimeraX-Struts: 1.0
    ChimeraX-Surface: 1.0
    ChimeraX-SwapAA: 2.0
    ChimeraX-SwapRes: 2.1
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.1
    ChimeraX-ToolshedUtils: 1.2
    ChimeraX-Tug: 1.0
    ChimeraX-UI: 1.15.1
    ChimeraX-uniprot: 2.2
    ChimeraX-UnitCell: 1.0
    ChimeraX-ViewDockX: 1.0.1
    ChimeraX-VIPERdb: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0
    ChimeraX-WebServices: 1.0
    ChimeraX-Zone: 1.0
    colorama: 0.4.4
    comtypes: 1.1.10
    cxservices: 1.1
    cycler: 0.11.0
    Cython: 0.29.24
    decorator: 5.1.0
    docutils: 0.17.1
    filelock: 3.0.12
    funcparserlib: 0.3.6
    grako: 3.16.5
    h5py: 3.6.0
    html2text: 2020.1.16
    idna: 3.3
    ihm: 0.21
    imagecodecs: 2021.4.28
    imagesize: 1.3.0
    ipykernel: 5.5.5
    ipython: 7.23.1
    ipython-genutils: 0.2.0
    jedi: 0.18.0
    Jinja2: 3.0.1
    jupyter-client: 6.1.12
    jupyter-core: 4.9.1
    kiwisolver: 1.3.2
    lxml: 4.6.3
    lz4: 3.1.3
    MarkupSafe: 2.0.1
    matplotlib: 3.4.3
    matplotlib-inline: 0.1.3
    msgpack: 1.0.2
    netCDF4: 1.5.7
    networkx: 2.6.3
    numexpr: 2.8.0
    numpy: 1.21.2
    openvr: 1.16.801
    packaging: 21.3
    ParmEd: 3.2.0
    parso: 0.8.3
    pickleshare: 0.7.5
    Pillow: 8.3.2
    pip: 21.2.4
    pkginfo: 1.7.1
    prompt-toolkit: 3.0.24
    psutil: 5.8.0
    pycollada: 0.7.1
    pydicom: 2.1.2
    Pygments: 2.10.0
    PyOpenGL: 3.1.5
    PyOpenGL-accelerate: 3.1.5
    pyparsing: 3.0.6
    PyQt5-commercial: 5.15.2
    PyQt5-sip: 12.8.1
    PyQtWebEngine-commercial: 5.15.2
    python-dateutil: 2.8.2
    pytz: 2021.3
    pywin32: 228
    pyzmq: 22.3.0
    qtconsole: 5.1.1
    QtPy: 1.11.3
    RandomWords: 0.3.0
    requests: 2.26.0
    scipy: 1.7.1
    setuptools: 57.5.0
    sfftk-rw: 0.7.1
    six: 1.16.0
    snowballstemmer: 2.2.0
    sortedcontainers: 2.4.0
    Sphinx: 4.2.0
    sphinx-autodoc-typehints: 1.12.0
    sphinxcontrib-applehelp: 1.0.2
    sphinxcontrib-blockdiag: 2.0.0
    sphinxcontrib-devhelp: 1.0.2
    sphinxcontrib-htmlhelp: 2.0.0
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 1.0.3
    sphinxcontrib-serializinghtml: 1.1.5
    suds-jurko: 0.6
    tables: 3.6.1
    tifffile: 2021.4.8
    tinyarray: 1.2.3
    tornado: 6.1
    traitlets: 5.1.1
    urllib3: 1.26.7
    wcwidth: 0.2.5
    webcolors: 1.11.1
    wheel: 0.37.0
    wheel-filename: 1.3.0
    WMI: 1.5.1