![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 4 years ago
Closed 4 years ago
#6663 closed defect (can't reproduce)
Crash processing drop event
| Reported by: | Owned by: | Eric Pettersen | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Window Toolkit | Version: | |
| Keywords: | Cc: | Tom Goddard | |
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: macOS-10.16-x86_64-i386-64bit
ChimeraX Version: 1.3 (2021-12-08 23:08:33 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Fatal Python error: Segmentation fault
Thread 0x000070000bfa1000 (most recent call first):
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 316 in wait
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 574 in wait
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 1284 in run
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x0000700019163000 (most recent call first):
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 576 in _handle_results
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x0000700018160000 (most recent call first):
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 528 in _handle_tasks
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x000070001715d000 (most recent call first):
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/selectors.py", line 416 in select
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/connection.py", line 936 in wait
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 499 in _wait_for_updates
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 519 in _handle_workers
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x000070001615a000 (most recent call first):
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 114 in worker
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x0000700015157000 (most recent call first):
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 114 in worker
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x0000700014154000 (most recent call first):
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 114 in worker
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Thread 0x0000700013151000 (most recent call first):
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 114 in worker
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
Current thread 0x00000001168a1e00 (most recent call first):
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/ui/gui.py", line 301 in event_loop
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/ChimeraX_main.py", line 867 in init
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/ChimeraX_main.py", line 1018 in
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 87 in _run_code
File "/private/var/folders/4k/6x1lt7z12bndc7bf5_y4j2z40000gn/T/AppTranslocation/2014CA98-947C-4817-A96E-B5DB0BA40A88/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 197 in _run_module_as_main
Process: ChimeraX [5671]
Path: /Volumes/VOLUME/*/ChimeraX-1.3.app/Contents/MacOS/ChimeraX
Identifier: edu.ucsf.cgl.ChimeraX
Version: 1.3.0 (1.3.0.0)
Code Type: X86-64 (Native)
Parent Process: ??? [1]
Responsible: ChimeraX [5671]
User ID: 501
Date/Time: 2022-04-21 06:43:18.442 +0900
OS Version: macOS 11.2.3 (20D91)
Report Version: 12
Anonymous UUID: 560C6C2D-5C72-CAFE-E755-53E50D7B67EC
Sleep/Wake UUID: 9481BA01-C18A-407D-9B53-832D139102EC
Time Awake Since Boot: 40000 seconds
Time Since Wake: 18000 seconds
System Integrity Protection: enabled
Notes: Translocated Process
Crashed Thread: 0 CrBrowserMain Dispatch queue: com.apple.main-thread
Exception Type: EXC_BAD_ACCESS (SIGSEGV)
Exception Codes: KERN_INVALID_ADDRESS at 0x0000053e0ad68d90
Exception Note: EXC_CORPSE_NOTIFY
VM Regions Near 0x53e0ad68d90:
VM_ALLOCATE 162623000-162c98000 [ 6612K] rw-/rwx SM=PRV
-->
MALLOC_NANO 600000000000-600008000000 [128.0M] rw-/rwx SM=PRV
Thread 0 Crashed:: CrBrowserMain Dispatch queue: com.apple.main-thread
0 libsystem_kernel.dylib 0x00007fff203b7462 __pthread_kill + 10
1 libsystem_pthread.dylib 0x00007fff203e5610 pthread_kill + 263
2 libsystem_c.dylib 0x00007fff202c7ba3 raise + 26
3 libsystem_platform.dylib 0x00007fff20429d7d _sigtramp + 29
4 ??? 000000000000000000 0 + 0
5 org.python.python 0x000000010c32a06d cfunction_call + 125
6 org.python.python 0x000000010c2eb6cc _PyObject_Call + 140
7 QtCore.abi3.so 0x000000011568e957 PyQtSlot::call(_object*, _object*) const + 39
8 QtCore.abi3.so 0x000000011568e866 PyQtSlot::invoke(void**, _object*, void*, bool) const + 374
9 QtCore.abi3.so 0x000000011568f455 PyQtSlotProxy::unislot(void**) + 85
10 QtCore.abi3.so 0x000000011568f3ca PyQtSlotProxy::qt_metacall(QMetaObject::Call, int, void**) + 58
11 QtCore 0x0000000115a6ab9f QObject::event(QEvent*) + 943
12 QtWidgets 0x000000011c4cf9ea QApplicationPrivate::notify_helper(QObject*, QEvent*) + 266
13 QtWidgets 0x000000011c4d0e11 QApplication::notify(QObject*, QEvent*) + 497
14 QtWidgets.abi3.so 0x00000001160d2db9 sipQApplication::notify(QObject*, QEvent*) + 233
15 QtCore 0x0000000115a3fa34 QCoreApplication::notifyInternal2(QObject*, QEvent*) + 212
16 QtCore 0x0000000115a40d79 QCoreApplicationPrivate::sendPostedEvents(QObject*, int, QThreadData*) + 809
17 libqcocoa.dylib 0x000000012a5fc259 QCocoaEventDispatcherPrivate::processPostedEvents() + 313
18 libqcocoa.dylib 0x000000012a5fc9c8 QCocoaEventDispatcherPrivate::postedEventsSourceCallback(void*) + 40
19 com.apple.CoreFoundation 0x00007fff204dda0c __CFRUNLOOP_IS_CALLING_OUT_TO_A_SOURCE0_PERFORM_FUNCTION__ + 17
20 com.apple.CoreFoundation 0x00007fff204dd974 __CFRunLoopDoSource0 + 180
21 com.apple.CoreFoundation 0x00007fff204dd6ef __CFRunLoopDoSources0 + 248
22 com.apple.CoreFoundation 0x00007fff204dc121 __CFRunLoopRun + 890
23 com.apple.CoreFoundation 0x00007fff204db6ce CFRunLoopRunSpecific + 563
24 com.apple.Foundation 0x00007fff21268fa1 -[NSRunLoop(NSRunLoop) runMode:beforeDate:] + 212
25 com.apple.Foundation 0x00007fff212f27c4 -[NSRunLoop(NSRunLoop) runUntilDate:] + 103
26 com.apple.AppKit 0x00007fff23047046 NSCoreDragReceiveMessageProc + 2174
27 com.apple.HIServices 0x00007fff257668b9 CallReceiveMessageCollectionWithMessage + 103
28 com.apple.HIServices 0x00007fff25760b75 DoMultipartDropMessage + 113
29 com.apple.HIServices 0x00007fff25760963 DoDropMessage + 42
30 com.apple.HIServices 0x00007fff25764533 CoreDragMessageHandler + 842
31 com.apple.CoreFoundation 0x00007fff205828eb __CFMessagePortPerform + 634
32 com.apple.CoreFoundation 0x00007fff204de188 __CFRUNLOOP_IS_CALLING_OUT_TO_A_SOURCE1_PERFORM_FUNCTION__ + 41
33 com.apple.CoreFoundation 0x00007fff204de065 __CFRunLoopDoSource1 + 595
34 com.apple.CoreFoundation 0x00007fff204dc709 __CFRunLoopRun + 2402
35 com.apple.CoreFoundation 0x00007fff204db6ce CFRunLoopRunSpecific + 563
36 com.apple.HIToolbox 0x00007fff28763630 RunCurrentEventLoopInMode + 292
37 com.apple.HIToolbox 0x00007fff2876342c ReceiveNextEventCommon + 709
38 com.apple.HIToolbox 0x00007fff2876314f _BlockUntilNextEventMatchingListInModeWithFilter + 64
39 com.apple.AppKit 0x00007fff22cfb9b1 _DPSNextEvent + 883
40 com.apple.AppKit 0x00007fff22cfa177 -[NSApplication(NSEvent) _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 1366
41 com.apple.AppKit 0x00007fff22cec68a -[NSApplication run] + 586
42 libqcocoa.dylib 0x000000012a5fb62f QCocoaEventDispatcher::processEvents(QFlags) + 2495
43 QtCore 0x0000000115a3bacf QEventLoop::exec(QFlags) + 431
44 QtCore 0x0000000115a40042 QCoreApplication::exec() + 130
45 QtWidgets.abi3.so 0x00000001161c4702 meth_QApplication_exec_(_object*, _object*) + 82
46 org.python.python 0x000000010c32a06d cfunction_call + 125
47 org.python.python 0x000000010c2eb17d _PyObject_MakeTpCall + 365
48 org.python.python 0x000000010c3c361c call_function + 876
49 org.python.python 0x000000010c3c0ab3 _PyEval_EvalFrameDefault + 25219
50 org.python.python 0x000000010c2eb948 function_code_fastcall + 104
51 org.python.python 0x000000010c2ed98a method_vectorcall + 202
52 org.python.python 0x000000010c3c358c call_function + 732
53 org.python.python 0x000000010c3c0ab3 _PyEval_EvalFrameDefault + 25219
54 org.python.python 0x000000010c3c4283 _PyEval_EvalCode + 2611
55 org.python.python 0x000000010c2eb8d1 _PyFunction_Vectorcall + 289
56 org.python.python 0x000000010c3c358c call_function + 732
57 org.python.python 0x000000010c3c0b4b _PyEval_EvalFrameDefault + 25371
58 org.python.python 0x000000010c3c4283 _PyEval_EvalCode + 2611
59 org.python.python 0x000000010c3ba70b PyEval_EvalCode + 139
60 org.python.python 0x000000010c3b7592 builtin_exec + 626
61 org.python.python 0x000000010c32986a cfunction_vectorcall_FASTCALL + 218
62 org.python.python 0x000000010c3c358c call_function + 732
63 org.python.python 0x000000010c3c0b4b _PyEval_EvalFrameDefault + 25371
64 org.python.python 0x000000010c3c4283 _PyEval_EvalCode + 2611
65 org.python.python 0x000000010c2eb8d1 _PyFunction_Vectorcall + 289
66 org.python.python 0x000000010c3c358c call_function + 732
67 org.python.python 0x000000010c3c0b4b _PyEval_EvalFrameDefault + 25371
68 org.python.python 0x000000010c3c4283 _PyEval_EvalCode + 2611
69 org.python.python 0x000000010c2eb8d1 _PyFunction_Vectorcall + 289
70 org.python.python 0x000000010c429e20 pymain_run_module + 208
71 org.python.python 0x000000010c429537 Py_RunMain + 1431
72 org.python.python 0x000000010c429b3f pymain_main + 223
73 org.python.python 0x000000010c429a4b Py_Main + 43
74 edu.ucsf.cgl.ChimeraX 0x000000010c2a3dc8 main + 120
75 libdyld.dylib 0x00007fff20400621 start + 1
Thread 1:: ThreadPoolServiceThread
0 libsystem_kernel.dylib 0x00007fff203b9dde kevent64 + 10
1 QtWebEngineCore 0x000000011ffe0e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x000000011ffe0cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x000000011ff6962b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x000000011ff2d7cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x000000011ff74a94 base::internal::ServiceThread::Run(base::RunLoop*) + 20
6 QtWebEngineCore 0x000000011ff88a7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x000000011ffd1e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff203e5950 _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff203e147b thread_start + 15
Thread 2:: ThreadPoolBackgroundWorker
0 libsystem_kernel.dylib 0x00007fff203b0e7e mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff203b11f0 mach_msg + 60
2 QtWebEngineCore 0x000000011ffd6492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011ff7e778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x000000011ff7f150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x000000011ff7ec44 base::internal::WorkerThread::RunBackgroundPooledWorker() + 20
6 QtWebEngineCore 0x000000011ffd1e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff203e5950 _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff203e147b thread_start + 15
Thread 3:: Chrome_IOThread
0 libsystem_kernel.dylib 0x00007fff203b9dde kevent64 + 10
1 QtWebEngineCore 0x000000011ffe0e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x000000011ffe0cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x000000011ff6962b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x000000011ff2d7cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x0000000123eadf06 content::BrowserProcessSubThread::IOThreadRun(base::RunLoop*) + 102
6 QtWebEngineCore 0x000000011ff88a7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x000000011ffd1e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff203e5950 _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff203e147b thread_start + 15
Thread 4:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff203b0e7e mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff203b11f0 mach_msg + 60
2 QtWebEngineCore 0x000000011ffd6492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011ffd62cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000011fefe1db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x000000011ff6962b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x000000011ff2d7cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x000000011ff88a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x000000011ffd1e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff203e5950 _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff203e147b thread_start + 15
Thread 5:: CompositorTileWorker1
0 libsystem_kernel.dylib 0x00007fff203b38e2 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff203e5e6f _pthread_cond_wait + 1254
2 QtWebEngineCore 0x000000011ffcde18 base::ConditionVariable::Wait() + 104
3 QtWebEngineCore 0x00000001212855f8 non-virtual thunk to cc::SingleThreadTaskGraphRunner::Run() + 56
4 QtWebEngineCore 0x000000011ffd1e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
5 libsystem_pthread.dylib 0x00007fff203e5950 _pthread_start + 224
6 libsystem_pthread.dylib 0x00007fff203e147b thread_start + 15
Thread 6:: Chrome_InProcGpuThread
0 libsystem_kernel.dylib 0x00007fff203b0e7e mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff203b11f0 mach_msg + 60
2 QtWebEngineCore 0x000000011ffd6492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011fefe20f base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 223
4 QtWebEngineCore 0x000000011ff6962b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
5 QtWebEngineCore 0x000000011ff2d7cb base::RunLoop::Run() + 395
6 QtWebEngineCore 0x000000011ff88a7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x000000011ffd1e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff203e5950 _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff203e147b thread_start + 15
Thread 7:: Chrome_ChildIOThread
0 libsystem_kernel.dylib 0x00007fff203b9dde kevent64 + 10
1 QtWebEngineCore 0x000000011ffe0e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x000000011ffe0cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x000000011ff6962b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x000000011ff2d7cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x000000011ff88a7d base::Thread::ThreadMain() + 413
6 QtWebEngineCore 0x000000011ffd1e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff203e5950 _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff203e147b thread_start + 15
Thread 8:: VizCompositorThread
0 libsystem_kernel.dylib 0x00007fff203b0e7e mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff203b11f0 mach_msg + 60
2 QtWebEngineCore 0x000000011ffd6492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011fefe20f base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 223
4 QtWebEngineCore 0x000000011ff6962b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
5 QtWebEngineCore 0x000000011ff2d7cb base::RunLoop::Run() + 395
6 QtWebEngineCore 0x000000011ff88a7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x000000011ffd1e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff203e5950 _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff203e147b thread_start + 15
Thread 9:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff203b0e7e mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff203b11f0 mach_msg + 60
2 QtWebEngineCore 0x000000011ffd6492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011ffd62cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000011fefe1db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x000000011ff6962b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x000000011ff2d7cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x000000011ff88a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x000000011ffd1e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff203e5950 _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff203e147b thread_start + 15
Thread 10:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff203b0e7e mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff203b11f0 mach_msg + 60
2 QtWebEngineCore 0x000000011ffd6492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011ffd62cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000011fefe1db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x000000011ff6962b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x000000011ff2d7cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x000000011ff88a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x000000011ffd1e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff203e5950 _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff203e147b thread_start + 15
Thread 11:: ThreadPoolSingleThreadForegroundBlocking0
0 libsystem_kernel.dylib 0x00007fff203b0e7e mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff203b11f0 mach_msg + 60
2 QtWebEngineCore 0x000000011ffd6492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011ffd62cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000011ff7e76a base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 42
5 QtWebEngineCore 0x000000011ff7f150 base::internal::WorkerThread::RunWorker() + 1024
6 QtWebEngineCore 0x000000011ff7ed34 base::internal::WorkerThread::RunDedicatedWorker() + 20
7 QtWebEngineCore 0x000000011ffd1e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff203e5950 _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff203e147b thread_start + 15
Thread 12:: MemoryInfra
0 libsystem_kernel.dylib 0x00007fff203b0e7e mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff203b11f0 mach_msg + 60
2 QtWebEngineCore 0x000000011ffd6492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011ffd62cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000011fefe1db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x000000011ff6962b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x000000011ff2d7cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x000000011ff88a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x000000011ffd1e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff203e5950 _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff203e147b thread_start + 15
Thread 13:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff203b0e7e mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff203b11f0 mach_msg + 60
2 QtWebEngineCore 0x000000011ffd6492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011ffd62cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000011fefe1db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x000000011ff6962b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x000000011ff2d7cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x000000011ff88a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x000000011ffd1e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff203e5950 _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff203e147b thread_start + 15
Thread 14:
0 libsystem_kernel.dylib 0x00007fff203b38e2 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff203e5e6f _pthread_cond_wait + 1254
2 org.python.python 0x000000010c419c76 PyThread_acquire_lock_timed + 454
3 _queue.cpython-39-darwin.so 0x0000000143f3057e _queue_SimpleQueue_get_impl + 526
4 _queue.cpython-39-darwin.so 0x0000000143f30126 _queue_SimpleQueue_get + 198
5 org.python.python 0x000000010c329934 cfunction_vectorcall_FASTCALL_KEYWORDS + 132
6 org.python.python 0x000000010c3c358c call_function + 732
7 org.python.python 0x000000010c3c0b4b _PyEval_EvalFrameDefault + 25371
8 org.python.python 0x000000010c3c4283 _PyEval_EvalCode + 2611
9 org.python.python 0x000000010c2eb8d1 _PyFunction_Vectorcall + 289
10 org.python.python 0x000000010c3c11c3 _PyEval_EvalFrameDefault + 27027
11 org.python.python 0x000000010c2eb948 function_code_fastcall + 104
12 org.python.python 0x000000010c3c358c call_function + 732
13 org.python.python 0x000000010c3c0a92 _PyEval_EvalFrameDefault + 25186
14 org.python.python 0x000000010c2eb948 function_code_fastcall + 104
15 org.python.python 0x000000010c3c358c call_function + 732
16 org.python.python 0x000000010c3c0a92 _PyEval_EvalFrameDefault + 25186
17 org.python.python 0x000000010c2eb948 function_code_fastcall + 104
18 org.python.python 0x000000010c2ed9d2 method_vectorcall + 274
19 org.python.python 0x000000010c4683c6 t_bootstrap + 70
20 org.python.python 0x000000010c4198c9 pythread_wrapper + 25
21 libsystem_pthread.dylib 0x00007fff203e5950 _pthread_start + 224
22 libsystem_pthread.dylib 0x00007fff203e147b thread_start + 15
Thread 15:
0 libsystem_kernel.dylib 0x00007fff203b38e2 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff203e5e6f _pthread_cond_wait + 1254
2 org.python.python 0x000000010c419c76 PyThread_acquire_lock_timed + 454
3 _queue.cpython-39-darwin.so 0x0000000143f3057e _queue_SimpleQueue_get_impl + 526
4 _queue.cpython-39-darwin.so 0x0000000143f30126 _queue_SimpleQueue_get + 198
5 org.python.python 0x000000010c329934 cfunction_vectorcall_FASTCALL_KEYWORDS + 132
6 org.python.python 0x000000010c3c358c call_function + 732
7 org.python.python 0x000000010c3c0b4b _PyEval_EvalFrameDefault + 25371
8 org.python.python 0x000000010c3c4283 _PyEval_EvalCode + 2611
9 org.python.python 0x000000010c2eb8d1 _PyFunction_Vectorcall + 289
10 org.python.python 0x000000010c3c11c3 _PyEval_EvalFrameDefault + 27027
11 org.python.python 0x000000010c2eb948 function_code_fastcall + 104
12 org.python.python 0x000000010c3c358c call_function + 732
13 org.python.python 0x000000010c3c0a92 _PyEval_EvalFrameDefault + 25186
14 org.python.python 0x000000010c2eb948 function_code_fastcall + 104
15 org.python.python 0x000000010c3c358c call_function + 732
16 org.python.python 0x000000010c3c0a92 _PyEval_EvalFrameDefault + 25186
17 org.python.python 0x000000010c2eb948 function_code_fastcall + 104
18 org.python.python 0x000000010c2ed9d2 method_vectorcall + 274
19 org.python.python 0x000000010c4683c6 t_bootstrap + 70
20 org.python.python 0x000000010c4198c9 pythread_wrapper + 25
21 libsystem_pthread.dylib 0x00007fff203e5950 _pthread_start + 224
22 libsystem_pthread.dylib 0x00007fff203e147b thread_start + 15
Thread 16:
0 libsystem_kernel.dylib 0x00007fff203b38e2 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff203e5e6f _pthread_cond_wait + 1254
2 org.python.python 0x000000010c419c76 PyThread_acquire_lock_timed + 454
3 _queue.cpython-39-darwin.so 0x0000000143f3057e _queue_SimpleQueue_get_impl + 526
4 _queue.cpython-39-darwin.so 0x0000000143f30126 _queue_SimpleQueue_get + 198
5 org.python.python 0x000000010c329934 cfunction_vectorcall_FASTCALL_KEYWORDS + 132
6 org.python.python 0x000000010c3c358c call_function + 732
7 org.python.python 0x000000010c3c0b4b _PyEval_EvalFrameDefault + 25371
8 org.python.python 0x000000010c3c4283 _PyEval_EvalCode + 2611
9 org.python.python 0x000000010c2eb8d1 _PyFunction_Vectorcall + 289
10 org.python.python 0x000000010c3c11c3 _PyEval_EvalFrameDefault + 27027
11 org.python.python 0x000000010c2eb948 function_code_fastcall + 104
12 org.python.python 0x000000010c3c358c call_function + 732
13 org.python.python 0x000000010c3c0a92 _PyEval_EvalFrameDefault + 25186
14 org.python.python 0x000000010c2eb948 function_code_fastcall + 104
15 org.python.python 0x000000010c3c358c call_function + 732
16 org.python.python 0x000000010c3c0a92 _PyEval_EvalFrameDefault + 25186
17 org.python.python 0x000000010c2eb948 function_code_fastcall + 104
18 org.python.python 0x000000010c2ed9d2 method_vectorcall + 274
19 org.python.python 0x000000010c4683c6 t_bootstrap + 70
20 org.python.python 0x000000010c4198c9 pythread_wrapper + 25
21 libsystem_pthread.dylib 0x00007fff203e5950 _pthread_start + 224
22 libsystem_pthread.dylib 0x00007fff203e147b thread_start + 15
Thread 17:
0 libsystem_kernel.dylib 0x00007fff203b38e2 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff203e5e6f _pthread_cond_wait + 1254
2 org.python.python 0x000000010c419c76 PyThread_acquire_lock_timed + 454
3 _queue.cpython-39-darwin.so 0x0000000143f3057e _queue_SimpleQueue_get_impl + 526
4 _queue.cpython-39-darwin.so 0x0000000143f30126 _queue_SimpleQueue_get + 198
5 org.python.python 0x000000010c329934 cfunction_vectorcall_FASTCALL_KEYWORDS + 132
6 org.python.python 0x000000010c3c358c call_function + 732
7 org.python.python 0x000000010c3c0b4b _PyEval_EvalFrameDefault + 25371
8 org.python.python 0x000000010c3c4283 _PyEval_EvalCode + 2611
9 org.python.python 0x000000010c2eb8d1 _PyFunction_Vectorcall + 289
10 org.python.python 0x000000010c3c11c3 _PyEval_EvalFrameDefault + 27027
11 org.python.python 0x000000010c2eb948 function_code_fastcall + 104
12 org.python.python 0x000000010c3c358c call_function + 732
13 org.python.python 0x000000010c3c0a92 _PyEval_EvalFrameDefault + 25186
14 org.python.python 0x000000010c2eb948 function_code_fastcall + 104
15 org.python.python 0x000000010c3c358c call_function + 732
16 org.python.python 0x000000010c3c0a92 _PyEval_EvalFrameDefault + 25186
17 org.python.python 0x000000010c2eb948 function_code_fastcall + 104
18 org.python.python 0x000000010c2ed9d2 method_vectorcall + 274
19 org.python.python 0x000000010c4683c6 t_bootstrap + 70
20 org.python.python 0x000000010c4198c9 pythread_wrapper + 25
21 libsystem_pthread.dylib 0x00007fff203e5950 _pthread_start + 224
22 libsystem_pthread.dylib 0x00007fff203e147b thread_start + 15
Thread 18:
0 libsystem_kernel.dylib 0x00007fff203b74fe poll + 10
1 select.cpython-39-darwin.so 0x0000000114cfc802 select_poll_poll + 482
2 org.python.python 0x000000010c2f406f method_vectorcall_FASTCALL + 335
3 org.python.python 0x000000010c3c358c call_function + 732
4 org.python.python 0x000000010c3c0a92 _PyEval_EvalFrameDefault + 25186
5 org.python.python 0x000000010c3c4283 _PyEval_EvalCode + 2611
6 org.python.python 0x000000010c2eb8d1 _PyFunction_Vectorcall + 289
7 org.python.python 0x000000010c3c358c call_function + 732
8 org.python.python 0x000000010c3c0a92 _PyEval_EvalFrameDefault + 25186
9 org.python.python 0x000000010c3c4283 _PyEval_EvalCode + 2611
10 org.python.python 0x000000010c2eb8d1 _PyFunction_Vectorcall + 289
11 org.python.python 0x000000010c3c358c call_function + 732
12 org.python.python 0x000000010c3c0be1 _PyEval_EvalFrameDefault + 25521
13 org.python.python 0x000000010c3c4283 _PyEval_EvalCode + 2611
14 org.python.python 0x000000010c2eb8d1 _PyFunction_Vectorcall + 289
15 org.python.python 0x000000010c3c358c call_function + 732
16 org.python.python 0x000000010c3c0ab3 _PyEval_EvalFrameDefault + 25219
17 org.python.python 0x000000010c2eb948 function_code_fastcall + 104
18 org.python.python 0x000000010c2eda79 method_vectorcall + 441
19 org.python.python 0x000000010c3c11c3 _PyEval_EvalFrameDefault + 27027
20 org.python.python 0x000000010c2eb948 function_code_fastcall + 104
21 org.python.python 0x000000010c3c358c call_function + 732
22 org.python.python 0x000000010c3c0a92 _PyEval_EvalFrameDefault + 25186
23 org.python.python 0x000000010c2eb948 function_code_fastcall + 104
24 org.python.python 0x000000010c3c358c call_function + 732
25 org.python.python 0x000000010c3c0a92 _PyEval_EvalFrameDefault + 25186
26 org.python.python 0x000000010c2eb948 function_code_fastcall + 104
27 org.python.python 0x000000010c2ed9d2 method_vectorcall + 274
28 org.python.python 0x000000010c4683c6 t_bootstrap + 70
29 org.python.python 0x000000010c4198c9 pythread_wrapper + 25
30 libsystem_pthread.dylib 0x00007fff203e5950 _pthread_start + 224
31 libsystem_pthread.dylib 0x00007fff203e147b thread_start + 15
Thread 19:
0 libsystem_kernel.dylib 0x00007fff203b38e2 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff203e5e6f _pthread_cond_wait + 1254
2 org.python.python 0x000000010c419c76 PyThread_acquire_lock_timed + 454
3 _queue.cpython-39-darwin.so 0x0000000143f3057e _queue_SimpleQueue_get_impl + 526
4 _queue.cpython-39-darwin.so 0x0000000143f30126 _queue_SimpleQueue_get + 198
5 org.python.python 0x000000010c329934 cfunction_vectorcall_FASTCALL_KEYWORDS + 132
6 org.python.python 0x000000010c307bba calliter_iternext + 74
7 org.python.python 0x000000010c3c03fb _PyEval_EvalFrameDefault + 23499
8 org.python.python 0x000000010c2eb948 function_code_fastcall + 104
9 org.python.python 0x000000010c3c11c3 _PyEval_EvalFrameDefault + 27027
10 org.python.python 0x000000010c2eb948 function_code_fastcall + 104
11 org.python.python 0x000000010c3c358c call_function + 732
12 org.python.python 0x000000010c3c0a92 _PyEval_EvalFrameDefault + 25186
13 org.python.python 0x000000010c2eb948 function_code_fastcall + 104
14 org.python.python 0x000000010c3c358c call_function + 732
15 org.python.python 0x000000010c3c0a92 _PyEval_EvalFrameDefault + 25186
16 org.python.python 0x000000010c2eb948 function_code_fastcall + 104
17 org.python.python 0x000000010c2ed9d2 method_vectorcall + 274
18 org.python.python 0x000000010c4683c6 t_bootstrap + 70
19 org.python.python 0x000000010c4198c9 pythread_wrapper + 25
20 libsystem_pthread.dylib 0x00007fff203e5950 _pthread_start + 224
21 libsystem_pthread.dylib 0x00007fff203e147b thread_start + 15
Thread 20:
0 libsystem_kernel.dylib 0x00007fff203b38e2 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff203e5e6f _pthread_cond_wait + 1254
2 org.python.python 0x000000010c419c76 PyThread_acquire_lock_timed + 454
3 _queue.cpython-39-darwin.so 0x0000000143f3057e _queue_SimpleQueue_get_impl + 526
4 _queue.cpython-39-darwin.so 0x0000000143f30126 _queue_SimpleQueue_get + 198
5 org.python.python 0x000000010c329934 cfunction_vectorcall_FASTCALL_KEYWORDS + 132
6 org.python.python 0x000000010c3c358c call_function + 732
7 org.python.python 0x000000010c3c0b4b _PyEval_EvalFrameDefault + 25371
8 org.python.python 0x000000010c2eb948 function_code_fastcall + 104
9 org.python.python 0x000000010c3c11c3 _PyEval_EvalFrameDefault + 27027
10 org.python.python 0x000000010c2eb948 function_code_fastcall + 104
11 org.python.python 0x000000010c3c358c call_function + 732
12 org.python.python 0x000000010c3c0a92 _PyEval_EvalFrameDefault + 25186
13 org.python.python 0x000000010c2eb948 function_code_fastcall + 104
14 org.python.python 0x000000010c3c358c call_function + 732
15 org.python.python 0x000000010c3c0a92 _PyEval_EvalFrameDefault + 25186
16 org.python.python 0x000000010c2eb948 function_code_fastcall + 104
17 org.python.python 0x000000010c2ed9d2 method_vectorcall + 274
18 org.python.python 0x000000010c4683c6 t_bootstrap + 70
19 org.python.python 0x000000010c4198c9 pythread_wrapper + 25
20 libsystem_pthread.dylib 0x00007fff203e5950 _pthread_start + 224
21 libsystem_pthread.dylib 0x00007fff203e147b thread_start + 15
Thread 21:: com.apple.NSEventThread
0 libsystem_kernel.dylib 0x00007fff203b0e7e mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff203b11f0 mach_msg + 60
2 com.apple.CoreFoundation 0x00007fff204ddbf7 __CFRunLoopServiceMachPort + 316
3 com.apple.CoreFoundation 0x00007fff204dc2ca __CFRunLoopRun + 1315
4 com.apple.CoreFoundation 0x00007fff204db6ce CFRunLoopRunSpecific + 563
5 com.apple.AppKit 0x00007fff22e817c6 _NSEventThread + 124
6 libsystem_pthread.dylib 0x00007fff203e5950 _pthread_start + 224
7 libsystem_pthread.dylib 0x00007fff203e147b thread_start + 15
Thread 22:: ThreadPoolSingleThreadSharedBackgroundBlocking1
0 libsystem_kernel.dylib 0x00007fff203b0e7e mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff203b11f0 mach_msg + 60
2 QtWebEngineCore 0x000000011ffd6492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011ffd62cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000011ff7e76a base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 42
5 QtWebEngineCore 0x000000011ff7ee3d base::internal::WorkerThread::RunWorker() + 237
6 QtWebEngineCore 0x000000011ff7ec74 base::internal::WorkerThread::RunBackgroundSharedWorker() + 20
7 QtWebEngineCore 0x000000011ffd1e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff203e5950 _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff203e147b thread_start + 15
Thread 23:
0 libsystem_kernel.dylib 0x00007fff203b38e2 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff203e5e6f _pthread_cond_wait + 1254
2 libopenblas.0.dylib 0x000000010cf73a9f blas_thread_server + 207
3 libsystem_pthread.dylib 0x00007fff203e5950 _pthread_start + 224
4 libsystem_pthread.dylib 0x00007fff203e147b thread_start + 15
Thread 24:
0 libsystem_kernel.dylib 0x00007fff203b38e2 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff203e5e6f _pthread_cond_wait + 1254
2 libopenblas.0.dylib 0x000000010cf73a9f blas_thread_server + 207
3 libsystem_pthread.dylib 0x00007fff203e5950 _pthread_start + 224
4 libsystem_pthread.dylib 0x00007fff203e147b thread_start + 15
Thread 25:
0 libsystem_kernel.dylib 0x00007fff203b38e2 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff203e5e6f _pthread_cond_wait + 1254
2 libopenblas.0.dylib 0x000000010cf73a9f blas_thread_server + 207
3 libsystem_pthread.dylib 0x00007fff203e5950 _pthread_start + 224
4 libsystem_pthread.dylib 0x00007fff203e147b thread_start + 15
Thread 26:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff203b0e7e mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff203b11f0 mach_msg + 60
2 QtWebEngineCore 0x000000011ffd6492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011ff7e778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x000000011ff7f150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x000000011ff7ecd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x000000011ffd1e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff203e5950 _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff203e147b thread_start + 15
Thread 27:
0 libsystem_pthread.dylib 0x00007fff203e1458 start_wqthread + 0
Thread 28:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff203b0e7e mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff203b11f0 mach_msg + 60
2 QtWebEngineCore 0x000000011ffd6492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011ff7e778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x000000011ff7f150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x000000011ff7ecd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x000000011ffd1e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff203e5950 _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff203e147b thread_start + 15
Thread 29:
0 libsystem_pthread.dylib 0x00007fff203e1458 start_wqthread + 0
Thread 30:
0 libsystem_kernel.dylib 0x00007fff203b38e2 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff203e5e6f _pthread_cond_wait + 1254
2 org.python.python 0x000000010c419d6c PyThread_acquire_lock_timed + 700
3 org.python.python 0x000000010c468a1f acquire_timed + 111
4 org.python.python 0x000000010c468b30 lock_PyThread_acquire_lock + 48
5 org.python.python 0x000000010c2f3e54 method_vectorcall_VARARGS_KEYWORDS + 388
6 org.python.python 0x000000010c3c358c call_function + 732
7 org.python.python 0x000000010c3c0a92 _PyEval_EvalFrameDefault + 25186
8 org.python.python 0x000000010c3c4283 _PyEval_EvalCode + 2611
9 org.python.python 0x000000010c2eb8d1 _PyFunction_Vectorcall + 289
10 org.python.python 0x000000010c3c358c call_function + 732
11 org.python.python 0x000000010c3c0a92 _PyEval_EvalFrameDefault + 25186
12 org.python.python 0x000000010c3c4283 _PyEval_EvalCode + 2611
13 org.python.python 0x000000010c2eb8d1 _PyFunction_Vectorcall + 289
14 org.python.python 0x000000010c3c358c call_function + 732
15 org.python.python 0x000000010c3c0a92 _PyEval_EvalFrameDefault + 25186
16 org.python.python 0x000000010c2eb948 function_code_fastcall + 104
17 org.python.python 0x000000010c3c358c call_function + 732
18 org.python.python 0x000000010c3c0a92 _PyEval_EvalFrameDefault + 25186
19 org.python.python 0x000000010c2eb948 function_code_fastcall + 104
20 org.python.python 0x000000010c3c358c call_function + 732
21 org.python.python 0x000000010c3c0a92 _PyEval_EvalFrameDefault + 25186
22 org.python.python 0x000000010c2eb948 function_code_fastcall + 104
23 org.python.python 0x000000010c2ed9d2 method_vectorcall + 274
24 org.python.python 0x000000010c4683c6 t_bootstrap + 70
25 org.python.python 0x000000010c4198c9 pythread_wrapper + 25
26 libsystem_pthread.dylib 0x00007fff203e5950 _pthread_start + 224
27 libsystem_pthread.dylib 0x00007fff203e147b thread_start + 15
Thread 31:
0 libsystem_pthread.dylib 0x00007fff203e1458 start_wqthread + 0
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x00000001168a1e00 rcx: 0x00007fdb28f4da58 rdx: 0x0000000000000000
rdi: 0x0000000000000307 rsi: 0x000000000000000b rbp: 0x00007fdb28f4da80 rsp: 0x00007fdb28f4da58
r8: 0x00007fdb28f4df48 r9: 0x2a9f0f85a521bd64 r10: 0x00000001168a1e00 r11: 0x0000000000000246
r12: 0x0000000000000307 r13: 0x00006000025a8a80 r14: 0x000000000000000b r15: 0x0000000000000016
rip: 0x00007fff203b7462 rfl: 0x0000000000000246 cr2: 0x00007fdb2b386500
Logical CPU: 0
Error Code: 0x02000148
Trap Number: 133
Thread 0 instruction stream:
89 e5 41 57 41 56 41 55-41 54 53 48 83 ec 48 48 ..AWAVAUATSH..HH
89 fb 48 8b 7f 20 48 8b-47 08 f6 40 20 02 75 1d ..H.. H.G..@ .u.
49 89 f4 48 8b 4b 10 48-8b 41 40 48 85 c0 74 29 I..H.K.H.A@H..t)
4c 89 e6 ff d0 85 c0 0f-88 ef 03 00 00 48 8b 1d L............H..
1a e2 02 00 48 ff 03 48-89 d8 48 83 c4 48 5b 41 ....H..H..H..H[A
5c 41 5d 41 5e 41 5f 5d-c3 4c 8b 69 38 48 8b 07 \A]A^A_].L.i8H..
[ff]10 49 8b 4d 10 48 8b-51 10 48 8d 74 11 01 48 ..I.M.H.Q.H.t..H .u.I....M.u.M.
76 10 4c 8b 7b 20 49 8b-45 00 48 63 58 0c 48 63 v.L.{ I.E.HcX.Hc
40 08 48 29 c3 4c 89 e7-e8 1b 99 00 00 48 39 d8 @.H).L.......H9.
Thread 0 last branch register state not available.
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0x7fff4835d000 - 0x7fff483acfff com.apple.osanalytics.OSAnalytics (1.0 - 1) /System/Library/PrivateFrameworks/OSAnalytics.framework/Versions/A/OSAnalytics
0x7fff48c14000 - 0x7fff48c2ffff com.apple.network.statistics.framework (1.2 - 1) /System/Library/PrivateFrameworks/NetworkStatistics.framework/Versions/A/NetworkStatistics
0x7fff522eb000 - 0x7fff52319fff com.apple.HelpData (2.3 - 200) /System/Library/PrivateFrameworks/HelpData.framework/Versions/A/HelpData
0x7fff5231a000 - 0x7fff52334fff com.apple.shortcut (2.16 - 117) /System/Library/PrivateFrameworks/Shortcut.framework/Versions/A/Shortcut
0x7fff52335000 - 0x7fff523c7fff com.apple.Symbolication (12.2 - 64541.7.1) /System/Library/PrivateFrameworks/Symbolication.framework/Versions/A/Symbolication
0x7fff52541000 - 0x7fff52544fff libpmsample.dylib (227.60.1) /usr/lib/libpmsample.dylib
0x7fff54eb0000 - 0x7fff54ee7fff com.apple.ReplayKit (1.0 - 1) /System/Library/Frameworks/ReplayKit.framework/Versions/A/ReplayKit
0x7fff5650b000 - 0x7fff5650efff com.apple.ForceFeedback (1.0.6 - 1.0.6) /System/Library/Frameworks/ForceFeedback.framework/Versions/A/ForceFeedback
0x7fff590bb000 - 0x7fff590d6fff libJapaneseConverter.dylib (90) /System/Library/CoreServices/Encodings/libJapaneseConverter.dylib
0x7fff5efa1000 - 0x7fff5f9b4fff libSC.dylib (4.2.15) /System/Library/Extensions/AMDShared.bundle/Contents/PlugIns/libSC.dylib
0x7fff6a4c6000 - 0x7fff6a4cafff libmetal_timestamp.dylib (31001.161) /System/Library/PrivateFrameworks/GPUCompiler.framework/Versions/31001/Libraries/libmetal_timestamp.dylib
0x7fff6c934000 - 0x7fff6c93afff libCoreFSCache.dylib (177.22) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libCoreFSCache.dylib
0x7fff6c93b000 - 0x7fff6c93ffff libCoreVMClient.dylib (177.22) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libCoreVMClient.dylib
0x7fff6c940000 - 0x7fff6c94ffff com.apple.opengl (18.1.1 - 18.1.1) /System/Library/Frameworks/OpenGL.framework/Versions/A/OpenGL
0x7fff6c950000 - 0x7fff6c952fff libCVMSPluginSupport.dylib (18.1.1) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libCVMSPluginSupport.dylib
0x7fff6c953000 - 0x7fff6c95bfff libGFXShared.dylib (18.1.1) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGFXShared.dylib
0x7fff6c95c000 - 0x7fff6c98ffff libGLImage.dylib (18.1.1) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLImage.dylib
0x7fff6c990000 - 0x7fff6c9ccfff libGLU.dylib (18.1.1) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLU.dylib
0x7fff6c9cd000 - 0x7fff6cb61fff libGLProgrammability.dylib (18.1.1) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLProgrammability.dylib
0x7fff6cb62000 - 0x7fff6cb6cfff libGL.dylib (18.1.1) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib
0x7fff6cb6d000 - 0x7fff6cce8fff GLEngine (18.1.1) /System/Library/Frameworks/OpenGL.framework/Versions/A/Resources/GLEngine.bundle/GLEngine
0x7fff6cce9000 - 0x7fff6cd12fff GLRendererFloat (18.1.1) /System/Library/Frameworks/OpenGL.framework/Versions/A/Resources/GLRendererFloat.bundle/GLRendererFloat
0x7fff6dfa3000 - 0x7fff6dffbfff com.apple.opencl (4.5 - 4.5) /System/Library/Frameworks/OpenCL.framework/Versions/A/OpenCL
0x7fff6eb45000 - 0x7fff6ed05fff com.apple.AMDMTLBronzeDriver (4.2.15 - 4.0.2) /System/Library/Extensions/AMDMTLBronzeDriver.bundle/Contents/MacOS/AMDMTLBronzeDriver
0x7fff6ee7e000 - 0x7fff6eecdfff ATIRadeonX4000SCLib.dylib (4.2.15) /System/Library/Extensions/AMDRadeonX4000GLDriver.bundle/Contents/MacOS/ATIRadeonX4000SCLib.dylib
0x7fff6f07a000 - 0x7fff6f081fff com.apple.agl (3.3.4 - AGL-3.3.3) /System/Library/Frameworks/AGL.framework/Versions/A/AGL
0x7fff74410000 - 0x7fff7441bfff com.apple.SymptomAnalytics (1.0 - 1431.40.36) /System/Library/PrivateFrameworks/Symptoms.framework/Frameworks/SymptomAnalytics.framework/Versions/A/SymptomAnalytics
0x7fff74639000 - 0x7fff74651fff com.apple.SymptomPresentationFeed (1.0 - 1431.40.36) /System/Library/PrivateFrameworks/Symptoms.framework/Frameworks/SymptomPresentationFeed.framework/Versions/A/SymptomPresentationFeed
0x7fff78168000 - 0x7fff7816ffff libRosetta.dylib (203.30) /usr/lib/libRosetta.dylib
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 3
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 36104
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=1.1G resident=0K(0%) swapped_out_or_unallocated=1.1G(100%)
Writable regions: Total=1.4G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=1.4G(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 256K 2
Activity Tracing 256K 1
CG backing stores 4608K 6
CG image 428K 34
CoreAnimation 124K 18
CoreGraphics 12K 2
CoreUI image data 4328K 33
Foundation 16K 1
Kernel Alloc Once 8K 1
MALLOC 913.7M 745
MALLOC guard page 32K 8
MALLOC_LARGE (reserved) 384K 1 reserved VM address space (unallocated)
Mach message 24K 4
OpenGL GLSL 384K 5
STACK GUARD 124K 31
Stack 267.7M 32
Stack Guard 56.0M 1
VM_ALLOCATE 211.6M 203
__CTF 759 1
__DATA 43.3M 611
__DATA_CONST 22.0M 275
__DATA_DIRTY 1268K 173
__FONT_DATA 4K 1
__GLSLBUILTINS 5176K 1
__LINKEDIT 582.2M 157
__OBJC_RO 60.5M 1
__OBJC_RW 2449K 2
__TEXT 581.1M 586
__UNICODE 588K 1
mapped file 570.9M 54
shared memory 2244K 12
=========== ======= =======
TOTAL 3.3G 3003
TOTAL, minus reserved VM space 3.3G 3003
===== Log before crash start =====
UCSF ChimeraX version: 1.3 (2021-12-08)
© 2016-2021 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open
> /Volumes/ISHIMOE4/NQR/cryo/analysis/J18_G141A/cryosparc_P18_J47_010_volume_map_sharp.mrc
Opened cryosparc_P18_J47_010_volume_map_sharp.mrc as #1, grid size
320,320,320, pixel 0.88, shown at level 0.314, step 2, values float32
> volume #1 step 1
> set bgColor white
> volume #1 level 0.7054
> open
> /Volumes/ISHIMOE4/NQR/cryo/inhibitor/20220214_with_KRR-20220309T074435Z-001/20220214_with_KRR/cryosparc_P14_J83_007_volume_map_sharp.mrc
Opened cryosparc_P14_J83_007_volume_map_sharp.mrc as #2, grid size
320,320,320, pixel 0.88, shown at level 0.288, step 2, values float32
> hide #!2 target m
> open
> /Volumes/ISHIMOE4/NQR/cryo/inhibitor/20220214_with_KRR-20220309T074435Z-001/20220214_with_KRR/solNQR_KR_rigid-
> coot-1.pdb
Chain information for solNQR_KR_rigid-coot-1.pdb #3
---
Chain | Description
A | No description available
B | No description available
C | No description available
D | No description available
E | No description available
F | No description available
> ui tool show Matchmaker
No reference and/or match structure/chain chosen
> ui tool show "Fit in Map"
> hide #!2 target m
> close #2
Fit molecule solNQR_KR_rigid-coot-1.pdb (#3) to map
cryosparc_P18_J47_010_volume_map_sharp.mrc (#1) using 15200 atoms
average map value = 0.1427, steps = 76
shifted from previous position = 1.02
rotated from previous position = 3.46 degrees
atoms outside contour = 13040, contour level = 0.70543
Position of solNQR_KR_rigid-coot-1.pdb (#3) relative to
cryosparc_P18_J47_010_volume_map_sharp.mrc (#1) coordinates:
Matrix rotation and translation
0.99824417 0.03722157 0.04607747 -11.35645575
-0.03668291 0.99924901 -0.01248148 6.52768813
-0.04650745 0.01076931 0.99885989 5.98620373
Axis 0.19259355 0.76690989 -0.61217395
Axis point 111.52448579 -0.00000000 247.17959400
Rotation angle (degrees) 3.46060994
Shift along axis -0.84562946
> hide #!1 models
> show #!1 models
> hide #!1 models
> select #3
15200 atoms, 15546 bonds, 1935 residues, 1 model selected
> ui mousemode right rotate
> show #!1 models
> ui mousemode right "rotate selected models"
> select #1
2 models selected
> select #3
15200 atoms, 15546 bonds, 1935 residues, 1 model selected
> select #1
2 models selected
> ui mousemode right rotate
Drag select of 1 cryosparc_P18_J47_010_volume_map_sharp.mrc , 2978 atoms, 221
bonds
> select #3
15200 atoms, 15546 bonds, 1935 residues, 1 model selected
> select #1
2 models selected
> ui mousemode right "translate selected models"
> ui mousemode right "rotate selected models"
> select #3
15200 atoms, 15546 bonds, 1935 residues, 1 model selected
> ui mousemode right "rotate selected models"
> ui mousemode right "translate selected models"
> hide #3 models
> save /Users/ishikawamoe/Desktop/image1.png supersample 3
> volume #1 level 0.5323
> ui tool show "Side View"
> lighting flat
> lighting soft
> select #1
3 models selected
> transparency #1.1 50
> graphics silhouettes false
> transparency #1.1 20
> transparency #1.1 0
> color #1.1 light gray
> ~select #1
Nothing selected
> save /Users/ishikawamoe/Desktop/image2.png supersample 3
> open /Volumes/ISHIMOE4/NQR/cryo/oxidant/XrayVSCryo.cxs
opened ChimeraX session
===== Log before crash end =====
Log:
UCSF ChimeraX version: 1.3 (2021-12-08)
© 2016-2021 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 ATI-4.2.15
OpenGL renderer: AMD Radeon Pro 560 OpenGL Engine
OpenGL vendor: ATI Technologies Inc.Hardware:
Hardware Overview:
Model Name: iMac
Model Identifier: iMac18,2
Processor Name: Quad-Core Intel Core i5
Processor Speed: 3.4 GHz
Number of Processors: 1
Total Number of Cores: 4
L2 Cache (per Core): 256 KB
L3 Cache: 6 MB
Memory: 8 GB
System Firmware Version: 429.80.1.0.0
SMC Version (system): 2.40f1
Software:
System Software Overview:
System Version: macOS 11.2.3 (20D91)
Kernel Version: Darwin 20.3.0
Time since boot: 2 days 10:06
Graphics/Displays:
Radeon Pro 560:
Chipset Model: Radeon Pro 560
Type: GPU
Bus: PCIe
PCIe Lane Width: x8
VRAM (Total): 4 GB
Vendor: AMD (0x1002)
Device ID: 0x67ef
Revision ID: 0x00c0
ROM Revision: 113-C980AA-921
VBIOS Version: 113-C9810A1X-017
EFI Driver Version: 01.00.921
Metal Family: Supported, Metal GPUFamily macOS 2
Displays:
iMac:
Display Type: Built-In Retina LCD
Resolution: 4096 x 2304 Retina
Framebuffer Depth: 30-Bit Color (ARGB2101010)
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: Yes
Connection Type: Internal
Locale: (None, 'UTF-8')
PyQt5 5.15.2, Qt 5.15.2
Installed Packages:
alabaster: 0.7.12
appdirs: 1.4.4
appnope: 0.1.2
Babel: 2.9.1
backcall: 0.2.0
blockdiag: 2.0.1
certifi: 2021.5.30
cftime: 1.5.1.1
charset-normalizer: 2.0.9
ChimeraX-AddCharge: 1.2.2
ChimeraX-AddH: 2.1.11
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.2.3
ChimeraX-AlphaFold: 1.0
ChimeraX-AltlocExplorer: 1.0.1
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.31
ChimeraX-AtomicLibrary: 4.2
ChimeraX-AtomSearch: 2.0
ChimeraX-AtomSearchLibrary: 1.0
ChimeraX-AxesPlanes: 2.0
ChimeraX-BasicActions: 1.1
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.0
ChimeraX-BondRot: 2.0
ChimeraX-BugReporter: 1.0
ChimeraX-BuildStructure: 2.6.1
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.1
ChimeraX-ButtonPanel: 1.0
ChimeraX-CageBuilder: 1.0
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.2
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.2.2
ChimeraX-ColorActions: 1.0
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5
ChimeraX-CommandLine: 1.1.5
ChimeraX-ConnectStructure: 2.0
ChimeraX-Contacts: 1.0
ChimeraX-Core: 1.3
ChimeraX-CoreFormats: 1.1
ChimeraX-coulombic: 1.3.2
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0
ChimeraX-DataFormats: 1.2.2
ChimeraX-Dicom: 1.0
ChimeraX-DistMonitor: 1.1.5
ChimeraX-DistUI: 1.0
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0
ChimeraX-FunctionKey: 1.0
ChimeraX-Geometry: 1.1
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1
ChimeraX-Hbonds: 2.1.2
ChimeraX-Help: 1.2
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ItemsInspection: 1.0
ChimeraX-Label: 1.1
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.4
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.1
ChimeraX-Map: 1.1
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1
ChimeraX-Markers: 1.0
ChimeraX-Mask: 1.0
ChimeraX-MatchMaker: 2.0.4
ChimeraX-MDcrds: 2.6
ChimeraX-MedicalToolbar: 1.0.1
ChimeraX-Meeting: 1.0
ChimeraX-MLP: 1.1
ChimeraX-mmCIF: 2.4
ChimeraX-MMTF: 2.1
ChimeraX-Modeller: 1.2.6
ChimeraX-ModelPanel: 1.2.1
ChimeraX-ModelSeries: 1.0
ChimeraX-Mol2: 2.0
ChimeraX-Morph: 1.0
ChimeraX-MouseModes: 1.1
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0.2
ChimeraX-OpenCommand: 1.7
ChimeraX-PDB: 2.6.5
ChimeraX-PDBBio: 1.0
ChimeraX-PDBLibrary: 1.0.2
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.0.1
ChimeraX-PubChem: 2.1
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-ResidueFit: 1.0
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0.1
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.4.6
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0
ChimeraX-Shortcuts: 1.1
ChimeraX-ShowAttr: 1.0
ChimeraX-ShowSequences: 1.0
ChimeraX-SideView: 1.0
ChimeraX-Smiles: 2.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.6.1
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-Struts: 1.0
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0
ChimeraX-SwapRes: 2.1
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.1
ChimeraX-ToolshedUtils: 1.2
ChimeraX-Tug: 1.0
ChimeraX-UI: 1.13.7
ChimeraX-uniprot: 2.2
ChimeraX-UnitCell: 1.0
ChimeraX-ViewDockX: 1.0.1
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0
ChimeraX-WebServices: 1.0
ChimeraX-Zone: 1.0
colorama: 0.4.4
cxservices: 1.1
cycler: 0.11.0
Cython: 0.29.24
decorator: 5.1.0
docutils: 0.17.1
filelock: 3.0.12
funcparserlib: 0.3.6
grako: 3.16.5
h5py: 3.6.0
html2text: 2020.1.16
idna: 3.3
ihm: 0.21
imagecodecs: 2021.4.28
imagesize: 1.3.0
ipykernel: 5.5.5
ipython: 7.23.1
ipython-genutils: 0.2.0
jedi: 0.18.0
Jinja2: 3.0.1
jupyter-client: 6.1.12
jupyter-core: 4.9.1
kiwisolver: 1.3.2
lxml: 4.6.3
lz4: 3.1.3
MarkupSafe: 2.0.1
matplotlib: 3.4.3
matplotlib-inline: 0.1.3
msgpack: 1.0.2
netCDF4: 1.5.7
networkx: 2.6.3
numexpr: 2.8.0
numpy: 1.21.2
openvr: 1.16.801
packaging: 21.0
ParmEd: 3.2.0
parso: 0.8.3
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 8.3.2
pip: 21.2.4
pkginfo: 1.7.1
prompt-toolkit: 3.0.23
psutil: 5.8.0
ptyprocess: 0.7.0
pycollada: 0.7.1
pydicom: 2.1.2
Pygments: 2.10.0
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 3.0.6
PyQt5-commercial: 5.15.2
PyQt5-sip: 12.8.1
PyQtWebEngine-commercial: 5.15.2
python-dateutil: 2.8.2
pytz: 2021.3
pyzmq: 22.3.0
qtconsole: 5.1.1
QtPy: 1.11.3
RandomWords: 0.3.0
requests: 2.26.0
scipy: 1.7.1
setuptools: 57.5.0
sfftk-rw: 0.7.1
six: 1.16.0
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
Sphinx: 4.2.0
sphinx-autodoc-typehints: 1.12.0
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 2.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 2.0.0
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.5
suds-jurko: 0.6
tifffile: 2021.4.8
tinyarray: 1.2.3
tornado: 6.1
traitlets: 5.1.1
urllib3: 1.26.7
wcwidth: 0.2.5
webcolors: 1.11.1
wheel: 0.37.0
wheel-filename: 1.3.0
Change History (2)
comment:1 by , 4 years ago
| Cc: | added |
|---|---|
| Component: | Unassigned → Window Toolkit |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → accepted |
| Summary: | ChimeraX bug report submission → Crash processing drop event |
comment:2 by , 4 years ago
| Resolution: | → can't reproduce |
|---|---|
| Status: | accepted → closed |
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