![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 4 years ago
Closed 4 years ago
#6558 closed defect (duplicate)
Crash in garbage collection during new object allocation
| Reported by: | Owned by: | pett | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Core | Version: | |
| Keywords: | Cc: | Tom Goddard | |
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: macOS-10.13.6-x86_64-i386-64bit
ChimeraX Version: 1.2.3 (2021-05-13 06:57:20 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Process: ChimeraX [20435]
Path: /Applications/ChimeraX-1.2.3.app/Contents/MacOS/ChimeraX
Identifier: ChimeraX
Version: 1.2.3 (1.2.3.0)
Code Type: X86-64 (Native)
Parent Process: ??? [1]
Responsible: ChimeraX [20435]
User ID: 501
Date/Time: 2022-04-05 18:53:48.961 -0400
OS Version: Mac OS X 10.13.6 (17G14042)
Report Version: 12
Bridge OS Version: 4.6 (17P6610)
Anonymous UUID: 1114D332-BBD0-8090-194B-7665C2CDDA93
Sleep/Wake UUID: 29E977E9-B9F8-4DF2-A416-5FD96CA4C563
Time Awake Since Boot: 1200000 seconds
Time Since Wake: 2000 seconds
System Integrity Protection: disabled
Crashed Thread: 0 CrBrowserMain Dispatch queue: com.apple.main-thread
Exception Type: EXC_BAD_ACCESS (SIGSEGV)
Exception Codes: EXC_I386_GPFLT
Exception Note: EXC_CORPSE_NOTIFY
Thread 0 Crashed:: CrBrowserMain Dispatch queue: com.apple.main-thread
0 libsystem_kernel.dylib 0x00007fff66cc3b66 __pthread_kill + 10
1 libsystem_pthread.dylib 0x00007fff66e8e080 pthread_kill + 333
2 libsystem_c.dylib 0x00007fff66bd16fe raise + 26
3 libsystem_platform.dylib 0x00007fff66e81f5a _sigtramp + 26
4 ??? 000000000000000000 0 + 0
5 org.python.python 0x000000010d0830f0 tupletraverse + 48
6 org.python.python 0x000000010d1677d4 collect + 692
7 org.python.python 0x000000010d168744 _PyObject_GC_Alloc + 324
8 org.python.python 0x000000010d1687b5 _PyObject_GC_New + 21
9 org.python.python 0x000000010d0502f0 PyList_New + 112
10 _cmsgpack.cpython-38-darwin.so 0x00000001389b184e int unpack_execute(unpack_context*, char const*, long, long*) + 430
11 _cmsgpack.cpython-38-darwin.so 0x00000001389b571d __pyx_pw_7msgpack_9_cmsgpack_3unpackb(_object*, _object*, _object*) + 1709
12 org.python.python 0x000000010d035018 cfunction_call_varargs + 120
13 _serialize.cpython-38-darwin.so 0x000000013897afc1 __Pyx_PyObject_Call(_object*, _object*, _object*) + 97
14 _serialize.cpython-38-darwin.so 0x000000013897d4e2 __pyx_f_4core_10_serialize__decode_bytes(_object*) + 210
15 _serialize.cpython-38-darwin.so 0x00000001389727f2 __pyx_f_4core_10_serialize__decode_ext(int, _object*) + 642
16 _serialize.cpython-38-darwin.so 0x000000013897cf46 __pyx_pw_11cfunc_dot_to_py_42__Pyx_CFunc_object____int____bytes___to_py_1wrap(_object*, _object*, _object*) + 134
17 org.python.python 0x000000010d034a85 _PyObject_MakeTpCall + 373
18 org.python.python 0x000000010d036160 _PyObject_CallFunctionVa + 400
19 org.python.python 0x000000010d036302 _PyObject_CallFunction_SizeT + 146
20 _cmsgpack.cpython-38-darwin.so 0x00000001389b2035 int unpack_execute(unpack_context*, char const*, long, long*) + 2453
21 _cmsgpack.cpython-38-darwin.so 0x00000001389ab1d0 __pyx_f_7msgpack_9_cmsgpack_8Unpacker__unpack(__pyx_obj_7msgpack_9_cmsgpack_Unpacker*, int (*)(unpack_context*, char const*, long, long*), __pyx_opt_args_7msgpack_9_cmsgpack_8Unpacker__unpack*) + 176
22 _cmsgpack.cpython-38-darwin.so 0x00000001389b0076 __pyx_pw_7msgpack_9_cmsgpack_8Unpacker_23__next__(_object*) + 38
23 org.python.python 0x000000010d0f7fd7 builtin_next + 87
24 org.python.python 0x000000010d0715ff cfunction_vectorcall_FASTCALL + 175
25 org.python.python 0x000000010d10360c call_function + 444
26 org.python.python 0x000000010d100505 _PyEval_EvalFrameDefault + 25829
27 org.python.python 0x000000010d0353d0 function_code_fastcall + 128
28 org.python.python 0x000000010d10360c call_function + 444
29 org.python.python 0x000000010d100505 _PyEval_EvalFrameDefault + 25829
30 org.python.python 0x000000010d104454 _PyEval_EvalCodeWithName + 2804
31 org.python.python 0x000000010d03556e _PyFunction_Vectorcall + 270
32 org.python.python 0x000000010d037a9a method_vectorcall + 170
33 org.python.python 0x000000010d10360c call_function + 444
34 org.python.python 0x000000010d100598 _PyEval_EvalFrameDefault + 25976
35 org.python.python 0x000000010d104454 _PyEval_EvalCodeWithName + 2804
36 org.python.python 0x000000010d03556e _PyFunction_Vectorcall + 270
37 org.python.python 0x000000010d034dad PyVectorcall_Call + 109
38 org.python.python 0x000000010d100978 _PyEval_EvalFrameDefault + 26968
39 org.python.python 0x000000010d104454 _PyEval_EvalCodeWithName + 2804
40 org.python.python 0x000000010d03556e _PyFunction_Vectorcall + 270
41 org.python.python 0x000000010d037b7c method_vectorcall + 396
42 org.python.python 0x000000010d034dad PyVectorcall_Call + 109
43 org.python.python 0x000000010d100978 _PyEval_EvalFrameDefault + 26968
44 org.python.python 0x000000010d0353d0 function_code_fastcall + 128
45 org.python.python 0x000000010d10360c call_function + 444
46 org.python.python 0x000000010d100505 _PyEval_EvalFrameDefault + 25829
47 org.python.python 0x000000010d104454 _PyEval_EvalCodeWithName + 2804
48 org.python.python 0x000000010d03556e _PyFunction_Vectorcall + 270
49 org.python.python 0x000000010d034dad PyVectorcall_Call + 109
50 org.python.python 0x000000010d100978 _PyEval_EvalFrameDefault + 26968
51 org.python.python 0x000000010d104454 _PyEval_EvalCodeWithName + 2804
52 org.python.python 0x000000010d03556e _PyFunction_Vectorcall + 270
53 org.python.python 0x000000010d037a9a method_vectorcall + 170
54 org.python.python 0x000000010d10360c call_function + 444
55 org.python.python 0x000000010d100598 _PyEval_EvalFrameDefault + 25976
56 org.python.python 0x000000010d104454 _PyEval_EvalCodeWithName + 2804
57 org.python.python 0x000000010d03556e _PyFunction_Vectorcall + 270
58 org.python.python 0x000000010d034dad PyVectorcall_Call + 109
59 org.python.python 0x000000010d100978 _PyEval_EvalFrameDefault + 26968
60 org.python.python 0x000000010d104454 _PyEval_EvalCodeWithName + 2804
61 org.python.python 0x000000010d03556e _PyFunction_Vectorcall + 270
62 org.python.python 0x000000010d037a9a method_vectorcall + 170
63 org.python.python 0x000000010d10360c call_function + 444
64 org.python.python 0x000000010d100598 _PyEval_EvalFrameDefault + 25976
65 org.python.python 0x000000010d104454 _PyEval_EvalCodeWithName + 2804
66 org.python.python 0x000000010d03556e _PyFunction_Vectorcall + 270
67 org.python.python 0x000000010d10360c call_function + 444
68 org.python.python 0x000000010d100505 _PyEval_EvalFrameDefault + 25829
69 org.python.python 0x000000010d104454 _PyEval_EvalCodeWithName + 2804
70 org.python.python 0x000000010d03556e _PyFunction_Vectorcall + 270
71 org.python.python 0x000000010d034dad PyVectorcall_Call + 109
72 QtCore.abi3.so 0x000000011f445957 PyQtSlot::call(_object*, _object*) const + 39
73 QtCore.abi3.so 0x000000011f445866 PyQtSlot::invoke(void**, _object*, void*, bool) const + 374
74 QtCore.abi3.so 0x000000011f446455 PyQtSlotProxy::unislot(void**) + 85
75 QtCore.abi3.so 0x000000011f4463ca PyQtSlotProxy::qt_metacall(QMetaObject::Call, int, void**) + 58
76 QtCore 0x000000011f821b9f QObject::event(QEvent*) + 943
77 QtWidgets 0x00000001204469ea QApplicationPrivate::notify_helper(QObject*, QEvent*) + 266
78 QtWidgets 0x0000000120447e11 QApplication::notify(QObject*, QEvent*) + 497
79 QtWidgets.abi3.so 0x000000011fff9db9 sipQApplication::notify(QObject*, QEvent*) + 233
80 QtCore 0x000000011f7f6a34 QCoreApplication::notifyInternal2(QObject*, QEvent*) + 212
81 QtCore 0x000000011f7f7d79 QCoreApplicationPrivate::sendPostedEvents(QObject*, int, QThreadData*) + 809
82 libqcocoa.dylib 0x0000000130551259 QCocoaEventDispatcherPrivate::processPostedEvents() + 313
83 libqcocoa.dylib 0x00000001305519c8 QCocoaEventDispatcherPrivate::postedEventsSourceCallback(void*) + 40
84 com.apple.CoreFoundation 0x00007fff3eadb691 __CFRUNLOOP_IS_CALLING_OUT_TO_A_SOURCE0_PERFORM_FUNCTION__ + 17
85 com.apple.CoreFoundation 0x00007fff3eb95c8c __CFRunLoopDoSource0 + 108
86 com.apple.CoreFoundation 0x00007fff3eabe14c __CFRunLoopDoSources0 + 300
87 com.apple.CoreFoundation 0x00007fff3eabd56d __CFRunLoopRun + 1293
88 com.apple.CoreFoundation 0x00007fff3eabcdd3 CFRunLoopRunSpecific + 483
89 com.apple.HIToolbox 0x00007fff3dda7d96 RunCurrentEventLoopInMode + 286
90 com.apple.HIToolbox 0x00007fff3dda7a0f ReceiveNextEventCommon + 366
91 com.apple.HIToolbox 0x00007fff3dda7884 _BlockUntilNextEventMatchingListInModeWithFilter + 64
92 com.apple.AppKit 0x00007fff3c054a3b _DPSNextEvent + 2085
93 com.apple.AppKit 0x00007fff3c7eae34 -[NSApplication(NSEvent) _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 3044
94 com.apple.AppKit 0x00007fff3c04984d -[NSApplication run] + 764
95 libqcocoa.dylib 0x000000013055062f QCocoaEventDispatcher::processEvents(QFlags) + 2495
96 QtCore 0x000000011f7f2acf QEventLoop::exec(QFlags) + 431
97 QtCore 0x000000011f7f7042 QCoreApplication::exec() + 130
98 QtWidgets.abi3.so 0x00000001200eb702 meth_QApplication_exec_(_object*, _object*) + 82
99 org.python.python 0x000000010d0350c2 cfunction_call_varargs + 290
100 org.python.python 0x000000010d034a85 _PyObject_MakeTpCall + 373
101 org.python.python 0x000000010d103665 call_function + 533
102 org.python.python 0x000000010d10046e _PyEval_EvalFrameDefault + 25678
103 org.python.python 0x000000010d0353d0 function_code_fastcall + 128
104 org.python.python 0x000000010d037a9a method_vectorcall + 170
105 org.python.python 0x000000010d10360c call_function + 444
106 org.python.python 0x000000010d10046e _PyEval_EvalFrameDefault + 25678
107 org.python.python 0x000000010d104454 _PyEval_EvalCodeWithName + 2804
108 org.python.python 0x000000010d03556e _PyFunction_Vectorcall + 270
109 org.python.python 0x000000010d10360c call_function + 444
110 org.python.python 0x000000010d100505 _PyEval_EvalFrameDefault + 25829
111 org.python.python 0x000000010d104454 _PyEval_EvalCodeWithName + 2804
112 org.python.python 0x000000010d0f9f44 PyEval_EvalCode + 100
113 org.python.python 0x000000010d0f7332 builtin_exec + 626
114 org.python.python 0x000000010d0715ff cfunction_vectorcall_FASTCALL + 175
115 org.python.python 0x000000010d10360c call_function + 444
116 org.python.python 0x000000010d100505 _PyEval_EvalFrameDefault + 25829
117 org.python.python 0x000000010d104454 _PyEval_EvalCodeWithName + 2804
118 org.python.python 0x000000010d03556e _PyFunction_Vectorcall + 270
119 org.python.python 0x000000010d10360c call_function + 444
120 org.python.python 0x000000010d100505 _PyEval_EvalFrameDefault + 25829
121 org.python.python 0x000000010d104454 _PyEval_EvalCodeWithName + 2804
122 org.python.python 0x000000010d03556e _PyFunction_Vectorcall + 270
123 org.python.python 0x000000010d034dad PyVectorcall_Call + 109
124 org.python.python 0x000000010d166eb3 pymain_run_module + 195
125 org.python.python 0x000000010d166585 Py_RunMain + 1413
126 org.python.python 0x000000010d166bdf pymain_main + 223
127 org.python.python 0x000000010d166aeb Py_Main + 43
128 edu.ucsf.cgl.ChimeraX 0x000000010d008dc8 main + 120
129 libdyld.dylib 0x00007fff66b73015 start + 1
Thread 1:
0 libsystem_kernel.dylib 0x00007fff66cc3a16 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff66e8c589 _pthread_cond_wait + 732
2 libopenblas.0.dylib 0x000000010eb4127b blas_thread_server + 507
3 libsystem_pthread.dylib 0x00007fff66e8b661 _pthread_body + 340
4 libsystem_pthread.dylib 0x00007fff66e8b50d _pthread_start + 377
5 libsystem_pthread.dylib 0x00007fff66e8abf9 thread_start + 13
Thread 2:
0 libsystem_kernel.dylib 0x00007fff66cc3a16 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff66e8c589 _pthread_cond_wait + 732
2 libopenblas.0.dylib 0x000000010eb4127b blas_thread_server + 507
3 libsystem_pthread.dylib 0x00007fff66e8b661 _pthread_body + 340
4 libsystem_pthread.dylib 0x00007fff66e8b50d _pthread_start + 377
5 libsystem_pthread.dylib 0x00007fff66e8abf9 thread_start + 13
Thread 3:
0 libsystem_kernel.dylib 0x00007fff66cc3a16 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff66e8c589 _pthread_cond_wait + 732
2 libopenblas.0.dylib 0x000000010eb4127b blas_thread_server + 507
3 libsystem_pthread.dylib 0x00007fff66e8b661 _pthread_body + 340
4 libsystem_pthread.dylib 0x00007fff66e8b50d _pthread_start + 377
5 libsystem_pthread.dylib 0x00007fff66e8abf9 thread_start + 13
Thread 4:
0 libsystem_kernel.dylib 0x00007fff66cc3a16 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff66e8c589 _pthread_cond_wait + 732
2 libopenblas.0.dylib 0x000000010eb4127b blas_thread_server + 507
3 libsystem_pthread.dylib 0x00007fff66e8b661 _pthread_body + 340
4 libsystem_pthread.dylib 0x00007fff66e8b50d _pthread_start + 377
5 libsystem_pthread.dylib 0x00007fff66e8abf9 thread_start + 13
Thread 5:
0 libsystem_kernel.dylib 0x00007fff66cc3a16 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff66e8c589 _pthread_cond_wait + 732
2 libopenblas.0.dylib 0x000000010eb4127b blas_thread_server + 507
3 libsystem_pthread.dylib 0x00007fff66e8b661 _pthread_body + 340
4 libsystem_pthread.dylib 0x00007fff66e8b50d _pthread_start + 377
5 libsystem_pthread.dylib 0x00007fff66e8abf9 thread_start + 13
Thread 6:: ThreadPoolServiceThread
0 libsystem_kernel.dylib 0x00007fff66cc4c02 kevent64 + 10
1 QtWebEngineCore 0x0000000124145e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x0000000124145cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x00000001240ce62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x00000001240927cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x00000001240d9a94 base::internal::ServiceThread::Run(base::RunLoop*) + 20
6 QtWebEngineCore 0x00000001240eda7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x0000000124136e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff66e8b661 _pthread_body + 340
9 libsystem_pthread.dylib 0x00007fff66e8b50d _pthread_start + 377
10 libsystem_pthread.dylib 0x00007fff66e8abf9 thread_start + 13
Thread 7:: ThreadPoolBackgroundWorker
0 libsystem_kernel.dylib 0x00007fff66cba1fa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff66cb9714 mach_msg + 60
2 QtWebEngineCore 0x000000012413b492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001240e3778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x00000001240e4150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x00000001240e3c44 base::internal::WorkerThread::RunBackgroundPooledWorker() + 20
6 QtWebEngineCore 0x0000000124136e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff66e8b661 _pthread_body + 340
8 libsystem_pthread.dylib 0x00007fff66e8b50d _pthread_start + 377
9 libsystem_pthread.dylib 0x00007fff66e8abf9 thread_start + 13
Thread 8:: Chrome_IOThread
0 libsystem_kernel.dylib 0x00007fff66cc4c02 kevent64 + 10
1 QtWebEngineCore 0x0000000124145e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x0000000124145cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x00000001240ce62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x00000001240927cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x0000000128012f06 content::BrowserProcessSubThread::IOThreadRun(base::RunLoop*) + 102
6 QtWebEngineCore 0x00000001240eda7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x0000000124136e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff66e8b661 _pthread_body + 340
9 libsystem_pthread.dylib 0x00007fff66e8b50d _pthread_start + 377
10 libsystem_pthread.dylib 0x00007fff66e8abf9 thread_start + 13
Thread 9:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff66cba1fa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff66cb9714 mach_msg + 60
2 QtWebEngineCore 0x000000012413b492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000012413b2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001240631db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x00000001240ce62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x00000001240927cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x00000001240eda7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x0000000124136e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff66e8b661 _pthread_body + 340
10 libsystem_pthread.dylib 0x00007fff66e8b50d _pthread_start + 377
11 libsystem_pthread.dylib 0x00007fff66e8abf9 thread_start + 13
Thread 10:: CompositorTileWorker1
0 libsystem_kernel.dylib 0x00007fff66cc3a16 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff66e8c589 _pthread_cond_wait + 732
2 QtWebEngineCore 0x0000000124132e18 base::ConditionVariable::Wait() + 104
3 QtWebEngineCore 0x00000001253ea5f8 non-virtual thunk to cc::SingleThreadTaskGraphRunner::Run() + 56
4 QtWebEngineCore 0x0000000124136e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
5 libsystem_pthread.dylib 0x00007fff66e8b661 _pthread_body + 340
6 libsystem_pthread.dylib 0x00007fff66e8b50d _pthread_start + 377
7 libsystem_pthread.dylib 0x00007fff66e8abf9 thread_start + 13
Thread 11:: Chrome_InProcGpuThread
0 libsystem_kernel.dylib 0x00007fff66cba1fa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff66cb9714 mach_msg + 60
2 QtWebEngineCore 0x000000012413b492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000012406320f base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 223
4 QtWebEngineCore 0x00000001240ce62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
5 QtWebEngineCore 0x00000001240927cb base::RunLoop::Run() + 395
6 QtWebEngineCore 0x00000001240eda7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x0000000124136e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff66e8b661 _pthread_body + 340
9 libsystem_pthread.dylib 0x00007fff66e8b50d _pthread_start + 377
10 libsystem_pthread.dylib 0x00007fff66e8abf9 thread_start + 13
Thread 12:: Chrome_ChildIOThread
0 libsystem_kernel.dylib 0x00007fff66cc4c02 kevent64 + 10
1 QtWebEngineCore 0x0000000124145e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x0000000124145cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x00000001240ce62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x00000001240927cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x00000001240eda7d base::Thread::ThreadMain() + 413
6 QtWebEngineCore 0x0000000124136e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff66e8b661 _pthread_body + 340
8 libsystem_pthread.dylib 0x00007fff66e8b50d _pthread_start + 377
9 libsystem_pthread.dylib 0x00007fff66e8abf9 thread_start + 13
Thread 13:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff66cba1fa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff66cb9714 mach_msg + 60
2 QtWebEngineCore 0x000000012413b492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000012413b2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001240631db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x00000001240ce62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x00000001240927cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x00000001240eda7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x0000000124136e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff66e8b661 _pthread_body + 340
10 libsystem_pthread.dylib 0x00007fff66e8b50d _pthread_start + 377
11 libsystem_pthread.dylib 0x00007fff66e8abf9 thread_start + 13
Thread 14:: VizCompositorThread
0 libsystem_kernel.dylib 0x00007fff66cba1fa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff66cb9714 mach_msg + 60
2 QtWebEngineCore 0x000000012413b492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000012406320f base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 223
4 QtWebEngineCore 0x00000001240ce62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
5 QtWebEngineCore 0x00000001240927cb base::RunLoop::Run() + 395
6 QtWebEngineCore 0x00000001240eda7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x0000000124136e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff66e8b661 _pthread_body + 340
9 libsystem_pthread.dylib 0x00007fff66e8b50d _pthread_start + 377
10 libsystem_pthread.dylib 0x00007fff66e8abf9 thread_start + 13
Thread 15:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff66cba1fa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff66cb9714 mach_msg + 60
2 QtWebEngineCore 0x000000012413b492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000012413b2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001240631db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x00000001240ce62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x00000001240927cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x00000001240eda7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x0000000124136e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff66e8b661 _pthread_body + 340
10 libsystem_pthread.dylib 0x00007fff66e8b50d _pthread_start + 377
11 libsystem_pthread.dylib 0x00007fff66e8abf9 thread_start + 13
Thread 16:: ThreadPoolSingleThreadForegroundBlocking0
0 libsystem_kernel.dylib 0x00007fff66cba1fa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff66cb9714 mach_msg + 60
2 QtWebEngineCore 0x000000012413b492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000012413b2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001240e376a base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 42
5 QtWebEngineCore 0x00000001240e4150 base::internal::WorkerThread::RunWorker() + 1024
6 QtWebEngineCore 0x00000001240e3d34 base::internal::WorkerThread::RunDedicatedWorker() + 20
7 QtWebEngineCore 0x0000000124136e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff66e8b661 _pthread_body + 340
9 libsystem_pthread.dylib 0x00007fff66e8b50d _pthread_start + 377
10 libsystem_pthread.dylib 0x00007fff66e8abf9 thread_start + 13
Thread 17:: MemoryInfra
0 libsystem_kernel.dylib 0x00007fff66cba1fa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff66cb9714 mach_msg + 60
2 QtWebEngineCore 0x000000012413b492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000012413b2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001240631db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x00000001240ce62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x00000001240927cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x00000001240eda7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x0000000124136e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff66e8b661 _pthread_body + 340
10 libsystem_pthread.dylib 0x00007fff66e8b50d _pthread_start + 377
11 libsystem_pthread.dylib 0x00007fff66e8abf9 thread_start + 13
Thread 18:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff66cba1fa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff66cb9714 mach_msg + 60
2 QtWebEngineCore 0x000000012413b492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000012413b2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001240631db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x00000001240ce62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x00000001240927cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x00000001240eda7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x0000000124136e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff66e8b661 _pthread_body + 340
10 libsystem_pthread.dylib 0x00007fff66e8b50d _pthread_start + 377
11 libsystem_pthread.dylib 0x00007fff66e8abf9 thread_start + 13
Thread 19:: com.apple.NSEventThread
0 libsystem_kernel.dylib 0x00007fff66cba1fa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff66cb9714 mach_msg + 60
2 com.apple.CoreFoundation 0x00007fff3eabe405 __CFRunLoopServiceMachPort + 341
3 com.apple.CoreFoundation 0x00007fff3eabd757 __CFRunLoopRun + 1783
4 com.apple.CoreFoundation 0x00007fff3eabcdd3 CFRunLoopRunSpecific + 483
5 com.apple.AppKit 0x00007fff3c191fc4 _NSEventThread + 184
6 libsystem_pthread.dylib 0x00007fff66e8b661 _pthread_body + 340
7 libsystem_pthread.dylib 0x00007fff66e8b50d _pthread_start + 377
8 libsystem_pthread.dylib 0x00007fff66e8abf9 thread_start + 13
Thread 20:: ThreadPoolSingleThreadSharedBackgroundBlocking1
0 libsystem_kernel.dylib 0x00007fff66cba1fa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff66cb9714 mach_msg + 60
2 QtWebEngineCore 0x000000012413b492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000012413b2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001240e376a base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 42
5 QtWebEngineCore 0x00000001240e3e3d base::internal::WorkerThread::RunWorker() + 237
6 QtWebEngineCore 0x00000001240e3c74 base::internal::WorkerThread::RunBackgroundSharedWorker() + 20
7 QtWebEngineCore 0x0000000124136e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff66e8b661 _pthread_body + 340
9 libsystem_pthread.dylib 0x00007fff66e8b50d _pthread_start + 377
10 libsystem_pthread.dylib 0x00007fff66e8abf9 thread_start + 13
Thread 21:
0 libsystem_kernel.dylib 0x00007fff66cc3a16 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff66e8c589 _pthread_cond_wait + 732
2 libopenblas.0.dylib 0x000000019f1712eb blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff66e8b661 _pthread_body + 340
4 libsystem_pthread.dylib 0x00007fff66e8b50d _pthread_start + 377
5 libsystem_pthread.dylib 0x00007fff66e8abf9 thread_start + 13
Thread 22:
0 libsystem_kernel.dylib 0x00007fff66cc3a16 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff66e8c589 _pthread_cond_wait + 732
2 libopenblas.0.dylib 0x000000019f1712eb blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff66e8b661 _pthread_body + 340
4 libsystem_pthread.dylib 0x00007fff66e8b50d _pthread_start + 377
5 libsystem_pthread.dylib 0x00007fff66e8abf9 thread_start + 13
Thread 23:
0 libsystem_kernel.dylib 0x00007fff66cc3a16 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff66e8c589 _pthread_cond_wait + 732
2 libopenblas.0.dylib 0x000000019f1712eb blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff66e8b661 _pthread_body + 340
4 libsystem_pthread.dylib 0x00007fff66e8b50d _pthread_start + 377
5 libsystem_pthread.dylib 0x00007fff66e8abf9 thread_start + 13
Thread 24:
0 libsystem_kernel.dylib 0x00007fff66cc3a16 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff66e8c589 _pthread_cond_wait + 732
2 libopenblas.0.dylib 0x000000019f1712eb blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff66e8b661 _pthread_body + 340
4 libsystem_pthread.dylib 0x00007fff66e8b50d _pthread_start + 377
5 libsystem_pthread.dylib 0x00007fff66e8abf9 thread_start + 13
Thread 25:
0 libsystem_kernel.dylib 0x00007fff66cc3a16 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff66e8c589 _pthread_cond_wait + 732
2 libopenblas.0.dylib 0x000000019f1712eb blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff66e8b661 _pthread_body + 340
4 libsystem_pthread.dylib 0x00007fff66e8b50d _pthread_start + 377
5 libsystem_pthread.dylib 0x00007fff66e8abf9 thread_start + 13
Thread 26:: QFileInfoGatherer
0 libsystem_kernel.dylib 0x00007fff66cc3a16 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff66e8c589 _pthread_cond_wait + 732
2 QtCore 0x000000011f62875b QWaitConditionPrivate::wait(QDeadlineTimer) + 59
3 QtCore 0x000000011f62869d QWaitCondition::wait(QMutex*, QDeadlineTimer) + 93
4 QtWidgets 0x0000000120676c68 QFileInfoGatherer::run() + 136
5 QtCore 0x000000011f620619 QThreadPrivate::start(void*) + 329
6 libsystem_pthread.dylib 0x00007fff66e8b661 _pthread_body + 340
7 libsystem_pthread.dylib 0x00007fff66e8b50d _pthread_start + 377
8 libsystem_pthread.dylib 0x00007fff66e8abf9 thread_start + 13
Thread 27:: QFileInfoGatherer
0 libsystem_kernel.dylib 0x00007fff66cc3a16 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff66e8c589 _pthread_cond_wait + 732
2 QtCore 0x000000011f62875b QWaitConditionPrivate::wait(QDeadlineTimer) + 59
3 QtCore 0x000000011f62869d QWaitCondition::wait(QMutex*, QDeadlineTimer) + 93
4 QtWidgets 0x0000000120676c68 QFileInfoGatherer::run() + 136
5 QtCore 0x000000011f620619 QThreadPrivate::start(void*) + 329
6 libsystem_pthread.dylib 0x00007fff66e8b661 _pthread_body + 340
7 libsystem_pthread.dylib 0x00007fff66e8b50d _pthread_start + 377
8 libsystem_pthread.dylib 0x00007fff66e8abf9 thread_start + 13
Thread 28:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff66cba1fa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff66cb9714 mach_msg + 60
2 QtWebEngineCore 0x000000012413b492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001240e3778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x00000001240e4150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x00000001240e3cd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x0000000124136e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff66e8b661 _pthread_body + 340
8 libsystem_pthread.dylib 0x00007fff66e8b50d _pthread_start + 377
9 libsystem_pthread.dylib 0x00007fff66e8abf9 thread_start + 13
Thread 29:
0 libsystem_kernel.dylib 0x00007fff66cc428a __workq_kernreturn + 10
1 libsystem_pthread.dylib 0x00007fff66e8b20e _pthread_wqthread + 1552
2 libsystem_pthread.dylib 0x00007fff66e8abe9 start_wqthread + 13
Thread 30:: QFileInfoGatherer
0 libsystem_kernel.dylib 0x00007fff66cc3a16 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff66e8c589 _pthread_cond_wait + 732
2 QtCore 0x000000011f62875b QWaitConditionPrivate::wait(QDeadlineTimer) + 59
3 QtCore 0x000000011f62869d QWaitCondition::wait(QMutex*, QDeadlineTimer) + 93
4 QtWidgets 0x0000000120676c68 QFileInfoGatherer::run() + 136
5 QtCore 0x000000011f620619 QThreadPrivate::start(void*) + 329
6 libsystem_pthread.dylib 0x00007fff66e8b661 _pthread_body + 340
7 libsystem_pthread.dylib 0x00007fff66e8b50d _pthread_start + 377
8 libsystem_pthread.dylib 0x00007fff66e8abf9 thread_start + 13
Thread 31:
0 libsystem_pthread.dylib 0x00007fff66e8abdc start_wqthread + 0
1 ??? 0x0009000300030002 0 + 2533287675494402
Thread 32:
0 libsystem_pthread.dylib 0x00007fff66e8abdc start_wqthread + 0
1 ??? 0x0006000000050007 0 + 1688849860591623
Thread 33:
0 libsystem_kernel.dylib 0x00007fff66cc428a __workq_kernreturn + 10
1 libsystem_pthread.dylib 0x00007fff66e8b20e _pthread_wqthread + 1552
2 libsystem_pthread.dylib 0x00007fff66e8abe9 start_wqthread + 13
Thread 34:
0 libsystem_kernel.dylib 0x00007fff66cc428a __workq_kernreturn + 10
1 libsystem_pthread.dylib 0x00007fff66e8b009 _pthread_wqthread + 1035
2 libsystem_pthread.dylib 0x00007fff66e8abe9 start_wqthread + 13
Thread 35:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff66cba1fa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff66cb9714 mach_msg + 60
2 QtWebEngineCore 0x000000012413b492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001240e3778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x00000001240e3e3d base::internal::WorkerThread::RunWorker() + 237
5 QtWebEngineCore 0x00000001240e3cd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x0000000124136e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff66e8b661 _pthread_body + 340
8 libsystem_pthread.dylib 0x00007fff66e8b50d _pthread_start + 377
9 libsystem_pthread.dylib 0x00007fff66e8abf9 thread_start + 13
Thread 36:
0 libsystem_kernel.dylib 0x00007fff66cc3a16 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff66e8c589 _pthread_cond_wait + 732
2 org.python.python 0x000000010d156b2c PyThread_acquire_lock_timed + 700
3 org.python.python 0x000000010d1a3c4f acquire_timed + 111
4 org.python.python 0x000000010d1a3d60 lock_PyThread_acquire_lock + 48
5 org.python.python 0x000000010d03def5 method_vectorcall_VARARGS_KEYWORDS + 373
6 org.python.python 0x000000010d10360c call_function + 444
7 org.python.python 0x000000010d10044a _PyEval_EvalFrameDefault + 25642
8 org.python.python 0x000000010d104454 _PyEval_EvalCodeWithName + 2804
9 org.python.python 0x000000010d03556e _PyFunction_Vectorcall + 270
10 org.python.python 0x000000010d10360c call_function + 444
11 org.python.python 0x000000010d10044a _PyEval_EvalFrameDefault + 25642
12 org.python.python 0x000000010d104454 _PyEval_EvalCodeWithName + 2804
13 org.python.python 0x000000010d03556e _PyFunction_Vectorcall + 270
14 org.python.python 0x000000010d10360c call_function + 444
15 org.python.python 0x000000010d10044a _PyEval_EvalFrameDefault + 25642
16 org.python.python 0x000000010d0353d0 function_code_fastcall + 128
17 org.python.python 0x000000010d10360c call_function + 444
18 org.python.python 0x000000010d10044a _PyEval_EvalFrameDefault + 25642
19 org.python.python 0x000000010d0353d0 function_code_fastcall + 128
20 org.python.python 0x000000010d10360c call_function + 444
21 org.python.python 0x000000010d10044a _PyEval_EvalFrameDefault + 25642
22 org.python.python 0x000000010d0353d0 function_code_fastcall + 128
23 org.python.python 0x000000010d037adb method_vectorcall + 235
24 org.python.python 0x000000010d034dad PyVectorcall_Call + 109
25 org.python.python 0x000000010d1a364a t_bootstrap + 74
26 org.python.python 0x000000010d156619 pythread_wrapper + 25
27 libsystem_pthread.dylib 0x00007fff66e8b661 _pthread_body + 340
28 libsystem_pthread.dylib 0x00007fff66e8b50d _pthread_start + 377
29 libsystem_pthread.dylib 0x00007fff66e8abf9 thread_start + 13
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x00007fff9f46b380 rcx: 0x000000010d4c5a48 rdx: 0x0000000000000000
rdi: 0x0000000000000307 rsi: 0x000000000000000b rbp: 0x000000010d4c5a80 rsp: 0x000000010d4c5a48
r8: 0x000000010d4c5f48 r9: 0x000000010d2a4040 r10: 0x00007fff9f46b3c8 r11: 0x0000000000000287
r12: 0x0000000000000307 r13: 0x000000010d2a3e98 r14: 0x000000000000000b r15: 0x000000000000002d
rip: 0x00007fff66cc3b66 rfl: 0x0000000000000286 cr2: 0x000000010d2836c4
Logical CPU: 0
Error Code: 0x02000148
Trap Number: 133
Binary Images:
0x10d008000 - 0x10d008ff3 +edu.ucsf.cgl.ChimeraX (1.2.3 - 1.2.3.0) /Applications/ChimeraX-1.2.3.app/Contents/MacOS/ChimeraX
0x10d014000 - 0x10d24aff7 +org.python.python (3.8.8, [c] 2001-2019 Python Software Foundation. - 3.8.8) /Applications/ChimeraX-1.2.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/Python
0x10d64b000 - 0x10d64dff7 +_heapq.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_heapq.cpython-38-darwin.so
0x10d755000 - 0x10d75aff7 +zlib.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/zlib.cpython-38-darwin.so
0x10d764000 - 0x10d766ff7 +_bz2.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_bz2.cpython-38-darwin.so
0x10d76f000 - 0x10d7a0fff +_lzma.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_lzma.cpython-38-darwin.so
0x10d7af000 - 0x10d7b0ff7 +grp.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/grp.cpython-38-darwin.so
0x10d7f8000 - 0x10d800fff +math.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/math.cpython-38-darwin.so
0x10d80c000 - 0x10d80dff7 +_bisect.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_bisect.cpython-38-darwin.so
0x10d815000 - 0x10d819ff7 +_sha512.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_sha512.cpython-38-darwin.so
0x10d822000 - 0x10d823ff7 +_random.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_random.cpython-38-darwin.so
0x10d935000 - 0x10d93afff +_json.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_json.cpython-38-darwin.so
0x10d984000 - 0x10d998ff7 +_ssl.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_ssl.cpython-38-darwin.so
0x10d9b1000 - 0x10da09fff +libssl.1.1.dylib (0) /Applications/ChimeraX-1.2.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/libssl.1.1.dylib
0x10da38000 - 0x10dc4eda7 +libcrypto.1.1.dylib (0) /Applications/ChimeraX-1.2.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/libcrypto.1.1.dylib
0x10dcec000 - 0x10dcf9fff +_socket.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_socket.cpython-38-darwin.so
0x10dd86000 - 0x10dd89ff7 +select.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/select.cpython-38-darwin.so
0x10dd93000 - 0x10dd98fff +_struct.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_struct.cpython-38-darwin.so
0x10dda5000 - 0x10dda9fff +binascii.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/binascii.cpython-38-darwin.so
0x10ddf2000 - 0x10ddf5ff7 +_hashlib.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_hashlib.cpython-38-darwin.so
0x10ddff000 - 0x10de05fff +_blake2.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_blake2.cpython-38-darwin.so
0x10de0f000 - 0x10de1ffff +_sha3.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_sha3.cpython-38-darwin.so
0x10dea9000 - 0x10deb8fff +_datetime.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_datetime.cpython-38-darwin.so
0x10df49000 - 0x10df49ff7 +_scproxy.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_scproxy.cpython-38-darwin.so
0x10df69000 - 0x10dfb2fff +_decimal.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_decimal.cpython-38-darwin.so
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0x16c339000 - 0x16c3c3fff +ckdtree.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/scipy/spatial/ckdtree.cpython-38-darwin.so
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0x7fff66e80000 - 0x7fff66e87ff7 libsystem_platform.dylib (161.50.1) /usr/lib/system/libsystem_platform.dylib
0x7fff66e88000 - 0x7fff66e93fff libsystem_pthread.dylib (301.50.1) /usr/lib/system/libsystem_pthread.dylib
0x7fff66e94000 - 0x7fff66e97fff libsystem_sandbox.dylib (765.70.2) /usr/lib/system/libsystem_sandbox.dylib
0x7fff66e98000 - 0x7fff66e99ff3 libsystem_secinit.dylib (30) /usr/lib/system/libsystem_secinit.dylib
0x7fff66e9a000 - 0x7fff66ea1ff7 libsystem_symptoms.dylib (820.60.3) /usr/lib/system/libsystem_symptoms.dylib
0x7fff66ea2000 - 0x7fff66eb6ff7 libsystem_trace.dylib (829.70.2) /usr/lib/system/libsystem_trace.dylib
0x7fff66eb8000 - 0x7fff66ebdff7 libunwind.dylib (35.3) /usr/lib/system/libunwind.dylib
0x7fff66ebe000 - 0x7fff66eebfff libxpc.dylib (1205.70.16) /usr/lib/system/libxpc.dylib
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 23
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 2346214
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=993.8M resident=0K(0%) swapped_out_or_unallocated=993.8M(100%)
Writable regions: Total=20.8G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=20.8G(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 384K 3
Activity Tracing 256K 2
CG backing stores 1328K 5
CG image 968K 81
CG raster data 1080K 118
CoreAnimation 24.7M 583
CoreGraphics 8K 2
CoreImage 348K 45
CoreUI image data 6496K 44
CoreUI image file 280K 13
Foundation 16.0M 6
Image IO 68K 3
Kernel Alloc Once 8K 2
MALLOC 20.2G 1032
MALLOC guard page 48K 12
MALLOC_LARGE (reserved) 408K 4 reserved VM address space (unallocated)
Mach message 24K 5
Memory Tag 242 12K 2
Memory Tag 251 36K 3
OpenGL GLSL 384K 6
STACK GUARD 144K 37
Stack 161.8M 38
Stack Guard 56.0M 2
VM_ALLOCATE 158.1M 165
VM_ALLOCATE (reserved) 256.0M 3 reserved VM address space (unallocated)
__DATA 59.9M 663
__FONT_DATA 4K 2
__GLSLBUILTINS 2588K 2
__LINKEDIT 307.8M 244
__TEXT 686.0M 607
__UNICODE 560K 2
mapped file 218.1M 266
shared memory 5516K 25
=========== ======= =======
TOTAL 22.1G 3994
TOTAL, minus reserved VM space 21.9G 3994
System Profile:
Network Service: Wi-Fi, AirPort, en0
bridge_os_version: Bridge OS 4.6 (17P6610)
Boot Volume File System Type: apfs
bridge_model: iBridge2,3
Memory Module: BANK 0/ChannelA-DIMM0, 8 GB, DDR4, 2400 MHz, SK Hynix, -
Memory Module: BANK 2/ChannelB-DIMM0, 8 GB, DDR4, 2400 MHz, SK Hynix, -
USB Device: USB 3.1 Bus
USB Device: Portable SSD T5
USB Device: Portable SSD T5
USB Device: iBridge Bus
USB Device: Touch Bar Backlight
USB Device: Touch Bar Display
USB Device: Apple Internal Keyboard / Trackpad
USB Device: Headset
USB Device: Ambient Light Sensor
USB Device: FaceTime HD Camera (Built-in)
USB Device: Apple T2 Controller
Thunderbolt Bus: MacBook Pro, Apple Inc., 30.2
Thunderbolt Bus: MacBook Pro, Apple Inc., 30.2
Model: MacBookPro15,1, BootROM 1037.147.4.0.0 (iBridge: 17.16.16610.0.0,0), 6 processors, Intel Core i7, 2.6 GHz, 16 GB, SMC
Graphics: kHW_IntelUHDGraphics630Item, Intel UHD Graphics 630, Built-In
Graphics: kHW_AMDRadeonPro560XItem, Radeon Pro 560X, PCIe
AirPort: spairport_wireless_card_type_airport_extreme (0x14E4, 0x7BF), wl0: Oct 23 2019 19:42:37 version 9.130.28.49.32.1.58 FWID 01-8c182a16
Bluetooth: Version 6.0.7f22, 3 services, 27 devices, 1 incoming serial ports
Log:
UCSF ChimeraX version: 1.2.3 (2021-05-13)
© 2016-2021 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 ATI-1.68.25
OpenGL renderer: AMD Radeon Pro 560X OpenGL Engine
OpenGL vendor: ATI Technologies Inc.Hardware:
Hardware Overview:
Model Name: MacBook Pro
Model Identifier: MacBookPro15,1
Processor Name: Intel Core i7
Processor Speed: 2.6 GHz
Number of Processors: 1
Total Number of Cores: 6
L2 Cache (per Core): 256 KB
L3 Cache: 9 MB
Memory: 16 GB
Boot ROM Version: 1037.147.4.0.0 (iBridge: 17.16.16610.0.0,0)
Software:
System Software Overview:
System Version: macOS 10.13.6 (17G14042)
Kernel Version: Darwin 17.7.0
Time since boot: 30 days 21:58
Graphics/Displays:
Intel UHD Graphics 630:
Chipset Model: Intel UHD Graphics 630
Type: GPU
Bus: Built-In
VRAM (Dynamic, Max): 1536 MB
Vendor: Intel
Device ID: 0x3e9b
Revision ID: 0x0000
Automatic Graphics Switching: Supported
gMux Version: 5.0.0
Metal: Supported, feature set macOS GPUFamily1 v3
Radeon Pro 560X:
Chipset Model: Radeon Pro 560X
Type: GPU
Bus: PCIe
PCIe Lane Width: x8
VRAM (Dynamic, Max): 4096 MB
Vendor: AMD (0x1002)
Device ID: 0x67ef
Revision ID: 0x00c2
ROM Revision: 113-C980AL-075
VBIOS Version: 113-C97501U-005
EFI Driver Version: 01.A1.075
Automatic Graphics Switching: Supported
gMux Version: 5.0.0
Metal: Supported, feature set macOS GPUFamily1 v3
Displays:
Color LCD:
Display Type: Built-In Retina LCD
Resolution: 2880 x 1800 Retina
Framebuffer Depth: 24-Bit Color (ARGB8888)
Main Display: Yes
Mirror: Off
Online: Yes
Rotation: Supported
Automatically Adjust Brightness: No
Locale: (None, 'UTF-8')
PyQt5 5.15.2, Qt 5.15.2
Installed Packages:
alabaster: 0.7.12
appdirs: 1.4.4
appnope: 0.1.2
Babel: 2.9.1
backcall: 0.2.0
blockdiag: 2.0.1
certifi: 2020.12.5
cftime: 1.4.1
chardet: 3.0.4
ChimeraX-AddCharge: 1.0
ChimeraX-AddH: 2.1.6
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.1
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.13.3
ChimeraX-AtomicLibrary: 3.1.3
ChimeraX-AtomSearch: 2.0
ChimeraX-AtomSearchLibrary: 1.0
ChimeraX-AxesPlanes: 2.0
ChimeraX-BasicActions: 1.1
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 1.1
ChimeraX-BondRot: 2.0
ChimeraX-BugReporter: 1.0
ChimeraX-BuildStructure: 2.5.2
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.1
ChimeraX-ButtonPanel: 1.0
ChimeraX-CageBuilder: 1.0
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.1
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.1
ChimeraX-Clipper: 0.16.1
ChimeraX-ColorActions: 1.0
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.2.1
ChimeraX-CommandLine: 1.1.4
ChimeraX-ConnectStructure: 2.0
ChimeraX-Contacts: 1.0
ChimeraX-Core: 1.2.3
ChimeraX-CoreFormats: 1.0
ChimeraX-coulombic: 1.1.1
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0
ChimeraX-DataFormats: 1.1
ChimeraX-Dicom: 1.0
ChimeraX-DistMonitor: 1.1.2
ChimeraX-DistUI: 1.0
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0
ChimeraX-FunctionKey: 1.0
ChimeraX-Geometry: 1.1
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.0
ChimeraX-Hbonds: 2.1
ChimeraX-Help: 1.1
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.0
ChimeraX-ImageFormats: 1.1
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ISOLDE: 1.2.2
ChimeraX-Label: 1.0
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.2
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.1
ChimeraX-Map: 1.0.2
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.0
ChimeraX-Markers: 1.0
ChimeraX-Mask: 1.0
ChimeraX-MatchMaker: 1.2.1
ChimeraX-MDcrds: 2.2
ChimeraX-MedicalToolbar: 1.0.1
ChimeraX-Meeting: 1.0
ChimeraX-MLP: 1.1
ChimeraX-mmCIF: 2.3
ChimeraX-MMTF: 2.1
ChimeraX-Modeller: 1.0.1
ChimeraX-ModelPanel: 1.0.1
ChimeraX-ModelSeries: 1.0
ChimeraX-Mol2: 2.0
ChimeraX-Morph: 1.0
ChimeraX-MouseModes: 1.1
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0.1
ChimeraX-OpenCommand: 1.5
ChimeraX-PDB: 2.4.1
ChimeraX-PDBBio: 1.0
ChimeraX-PDBLibrary: 1.0.1
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.0.1
ChimeraX-PubChem: 2.0.1
ChimeraX-ReadPbonds: 1.0
ChimeraX-Registration: 1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-ResidueFit: 1.0
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.4
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SeqView: 2.3
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0
ChimeraX-Shortcuts: 1.0
ChimeraX-ShowAttr: 1.0
ChimeraX-ShowSequences: 1.0
ChimeraX-SideView: 1.0
ChimeraX-Smiles: 2.0.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.3.1
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-Struts: 1.0
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0
ChimeraX-SwapRes: 2.1
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.0.1
ChimeraX-ToolshedUtils: 1.2
ChimeraX-Tug: 1.0
ChimeraX-UI: 1.7.4
ChimeraX-uniprot: 2.1
ChimeraX-UnitCell: 1.0
ChimeraX-ViewDockX: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0
ChimeraX-WebServices: 1.0
ChimeraX-Zone: 1.0
colorama: 0.4.3
comtypes: 1.1.7
cxservices: 1.0
cycler: 0.10.0
Cython: 0.29.21
decorator: 5.0.7
distlib: 0.3.1
docutils: 0.16
filelock: 3.0.12
funcparserlib: 0.3.6
grako: 3.16.5
h5py: 2.10.0
html2text: 2020.1.16
idna: 2.10
ihm: 0.17
imagecodecs: 2020.5.30
imagesize: 1.2.0
ipykernel: 5.3.4
ipython: 7.18.1
ipython-genutils: 0.2.0
jedi: 0.17.2
Jinja2: 2.11.2
jupyter-client: 6.1.7
jupyter-core: 4.7.1
kiwisolver: 1.3.1
line-profiler: 2.1.2
lxml: 4.6.2
lz4: 3.1.0
MarkupSafe: 2.0.0
matplotlib: 3.3.2
matplotlib-inline: 0.1.2
msgpack: 1.0.0
netCDF4: 1.5.4
networkx: 2.5
numexpr: 2.7.3
numpy: 1.19.2
numpydoc: 1.1.0
openvr: 1.14.1501
packaging: 20.9
ParmEd: 3.2.0
parso: 0.7.1
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 7.2.0
pip: 21.0.1
pkginfo: 1.5.0.1
prompt-toolkit: 3.0.18
psutil: 5.7.2
ptyprocess: 0.7.0
pycollada: 0.7.1
pydicom: 2.0.0
Pygments: 2.7.1
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 2.4.7
PyQt5-commercial: 5.15.2
PyQt5-sip: 12.8.1
PyQtWebEngine-commercial: 5.15.2
python-dateutil: 2.8.1
pytz: 2021.1
pyzmq: 22.0.3
qtconsole: 4.7.7
QtPy: 1.9.0
RandomWords: 0.3.0
requests: 2.24.0
scipy: 1.5.2
setuptools: 50.3.2
sfftk-rw: 0.6.7.dev1
six: 1.15.0
snowballstemmer: 2.1.0
sortedcontainers: 2.2.2
Sphinx: 3.2.1
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 2.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 1.0.3
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.4
suds-jurko: 0.6
tables: 3.6.1
tifffile: 2020.9.3
tinyarray: 1.2.3
tornado: 6.1
traitlets: 5.0.5
urllib3: 1.25.11
wcwidth: 0.2.5
webcolors: 1.11.1
wheel: 0.36.0
wheel-filename: 1.3.0
Change History (2)
comment:1 by , 4 years ago
| Cc: | added |
|---|---|
| Component: | Unassigned → Core |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → accepted |
| Summary: | ChimeraX bug report submission → Crash in garbage collection during new object allocation |
comment:2 by , 4 years ago
| Resolution: | → duplicate |
|---|---|
| Status: | accepted → closed |
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