Opened 4 years ago

Last modified 4 years ago

#6535 accepted defect

Crash using File→Open on Windows and/or in return statement

Reported by: x6207220@… Owned by: Eric Pettersen
Priority: normal Milestone:
Component: Platform Version:
Keywords: Cc: Tom Goddard
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description 

The following bug report has been submitted:
Platform:        Windows-10-10.0.19042
ChimeraX Version: 1.3 (2021-12-08 23:08:33 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraXWindows fatal exception: code 0x_8001010em

ain.Windows fatal exception: pcode 0xy8001010e"

, line 867 in Windows fatal exception: icode 0xn8001010ei

t
Windows fatal exception:   File code 0x"8001010eC

:\Windows fatal exception: Pcode 0xr8001010eo

grWindows fatal exception: acode 0xm8001010e 

FiWindows fatal exception: lcode 0xe8001010es

\CWindows fatal exception: hcode 0xi8001010em

eraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\ProWindows fatal exception: gcode 0xr8001010ea

m FWindows fatal exception: icode 0xl8001010ee

s\Windows fatal exception: Ccode 0xh8001010ei

meWindows fatal exception: rcode 0xa8001010eX

 1Windows fatal exception: .code 0x38001010e\

biWindows fatal exception: ncode 0x\8001010el

ibWindows fatal exception: \code 0xr8001010eu

npWindows fatal exception: ycode 0x.8001010ep

y", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_modWindows fatal exception: code 0x8001010e

Windows fatal exception: ulcode 0xe8001010e_

as_Windows fatal exception: mcode 0xa8001010ei

n
Windows fatal exception: code 0xWindows fatal exception: code 0x8001010e8001010e



Thread 0x000022ecWindows fatal exception:  (most recent call first):
code 0x  File 8001010e"

C:Windows fatal exception: \code 0xP8001010er

ogWindows fatal exception: rcode 0xa8001010em

 FWindows fatal exception: ilcode 0xe8001010es

\CWindows fatal exception: hcode 0xi8001010em

erWindows fatal exception: acode 0xX8001010e 

1.3\bin\lib\site-packages\chimerax\open_commanWindows fatal exception: dcode 0x\8001010ed

iaWindows fatal exception: lcode 0xo8001010eg

.pWindows fatal exception: ycode 0x"8001010e, line 135 in show_open_file_dialog
  File "C:

\ProWindows fatal exception: gcode 0xr8001010ea

m Windows fatal exception: Fcode 0xi8001010el

esWindows fatal exception: \code 0xC8001010eh

imWindows fatal exception: ecode 0xr8001010ea

X Windows fatal exception: 1code 0x.8001010e3

\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: Windows fatal exception: code 0xcode 0x8001010e8001010e



Windows fatal exception: code 0xWindows fatal exception: 8001010ecode 0x

8001010eWindows fatal exception: 

code 0x8001010eWindows fatal exception: code 0x

8001010e

Windows fatal exception: code 0xWindows fatal exception: code 0x8001010e8001010e



Windows fatal exception: code 0xWindows fatal exception: 8001010ecode 0x

8001010eWindows fatal exception: 

code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: Windows fatal exception: code 0xcode 0x8001010e8001010e



Windows fatal exception: Windows fatal exception: code 0xcode 0x8001010e8001010e



Windows fatal exception: code 0xWindows fatal exception: 8001010ecode 0x

8001010e

Windows fatal exception: code 0xWindows fatal exception: 8001010ecode 0x

8001010e

Windows fatal exception: code 0xWindows fatal exception: code 0x135 in 8001010es

8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: Windows fatal exception: code 0xcode 0x8001010e8001010e



Windows fatal exception: Windows fatal exception: code 0xcode 0x8001010e8001010e



Windows fatal exception: Windows fatal exception: code 0xcode 0x8001010e8001010e



Windows fatal exception: Windows fatal exception: code 0xcode 0x8001010e8001010e



Windows fatal exception: code 0xWindows fatal exception: 8001010e

code 0xWindows fatal exception: 8001010ecode 0x

8001010e

Windows fatal exception: code 0xWindows fatal exception: 8001010ecode 0x

8001010e

Windows fatal exception: code 0xWindows fatal exception: 8001010ecode 0x

8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0xWindows fatal exception: hcode 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: Windows fatal exception: code 0xcode 0x8001010e8001010e



Windows fatal exception: Windows fatal exception: code 0xcode 0x8001010e8001010e



Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: Windows fatal exception: code 0xcode 0x8001010e8001010e



Windows fatal exception: Windows fatal exception: code 0xcode 0x8001010e8001010e



Windows fatal exception: code 0x8001010e

oWindows fatal exception: wcode 0x_8001010e

Windows fatal exception: code 0x8001010eo

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

pen_fWindows fatal exception: code 0xil8001010e

e_Windows fatal exception: dcode 0xi8001010ea

loWindows fatal exception: gcode 0x
8001010e  File 

"CWindows fatal exception: :code 0x\8001010eP

roWindows fatal exception: gcode 0xr8001010ea

m Windows fatal exception: Fcode 0xi8001010el

esWindows fatal exception: \code 0xC8001010eh

imWindows fatal exception: ecode 0xr8001010ea

X 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packaWindows fatal exception: code 0x8001010eWindows fatal exception: 

code 0x8001010e

Windows fatal exception: code 0xWindows fatal exception: 8001010ecode 0x

8001010e

Windows fatal exception: code 0xWindows fatal exception: 8001010ecode 0x

8001010e

Windows fatal exception: code 0xWindows fatal exception: 8001010ecode 0x

8001010e

Windows fatal exception: code 0xWindows fatal exception: 8001010ecode 0x

8001010e

Windows fatal exception: code 0xWindows fatal exception: 8001010ecode 0x

8001010e

Windows fatal exception: code 0xWindows fatal exception: 8001010ecode 0x

8001010e

Windows fatal exception: code 0xWindows fatal exception: 8001010ecode 0x

8001010e

ges\ChimeraX_main.py", line 867 in init
  File Windows fatal exception: code 0x"8001010eC

:\Windows fatal exception: Pcode 0xr8001010eo

grWindows fatal exception: acode 0xm8001010e 

FiWindows fatal exception: lcode 0xe8001010es

\CWindows fatal exception: hcode 0xi8001010em

erWindows fatal exception: acode 0xX8001010e 

1.Windows fatal exception: 3code 0x\8001010eb

inWindows fatal exception: \lib\scode 0xi8001010et

e-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_fileWindows fatal exception: code 0x8001010e

_dialog
Windows fatal exception:   File "code 0x8001010eC

:\Windows fatal exception: Pcode 0xr8001010eo

grWindows fatal exception: acode 0xm8001010e 

FiWindows fatal exception: lcode 0xe8001010es

\CWindows fatal exception: hcode 0xi8001010em

erWindows fatal exception: acode 0xX8001010e 

1.Windows fatal exception: 3code 0x\8001010eb

in\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in iniWindows fatal exception: tcode 0x
8001010e  File 

"C:Windows fatal exception: \code 0xP8001010er

ogWindows fatal exception: rcode 0xa8001010em

 FWindows fatal exception: icode 0xl8001010ee

s\Windows fatal exception: Ccode 0xh8001010ei

meWindows fatal exception: rcode 0xa8001010eX

 1Windows fatal exception: code 0x8001010e.

3\bWindows fatal exception: icode 0xn8001010e\

lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\binWindows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

\Windows fatal exception: lcode 0xi8001010eb

\sWindows fatal exception: icode 0xt8001010ee

-pWindows fatal exception: acode 0xc8001010ek

agWindows fatal exception: ecode 0xs8001010e\

ChWindows fatal exception: icode 0xm8001010ee

raWindows fatal exception: Xcode 0x_8001010em

ain.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1Windows fatal exception: .code 0x38001010e\

bin\Windows fatal exception: lcode 0xi8001010eb

\rWindows fatal exception: ucode 0xn8001010ep

y.Windows fatal exception: pcode 0xy8001010e"

, line 197Windows fatal exception:  in code 0x_8001010er

unWindows fatal exception: _code 0xm8001010eo

duWindows fatal exception: lcode 0xe8001010e_

asWindows fatal exception: _code 0xm8001010ea

in
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0xco8001010em

maWindows fatal exception: ncode 0xd8001010e\

diWindows fatal exception: acode 0xl8001010eo

g.pWindows fatal exception: y", line 135 in show_code 0x8001010e

opWindows fatal exception: ecode 0xn8001010e_

file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\ProgrWindows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

aWindows fatal exception: code 0x8001010e

mWindows fatal exception:  code 0xF8001010e

iWindows fatal exception: lcode 0xe8001010es

\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dWindows fatal exception: icode 0xa8001010el

og.Windows fatal exception: pcode 0xy8001010e"

, line 135Windows fatal exception:  in code 0xs8001010eh

owWindows fatal exception: _code 0xo8001010ep

en_Windows fatal exception: fcode 0xi8001010el

e_dWindows fatal exception: icode 0xa8001010el

ogWindows fatal exception: 
code 0x  File 8001010e"

C:Windows fatal exception: code 0x\8001010eP

rogram Files\Windows fatal exception: code 0xC8001010eh

imeWindows fatal exception: rcode 0xa8001010eX

 1Windows fatal exception: .code 0x38001010e\b

inWindows fatal exception: \code 0xl8001010ei

b\sWindows fatal exception: icode 0xt8001010ee

-pWindows fatal exception: accode 0xk8001010ea

geWindows fatal exception: scode 0x\8001010ec

himWindows fatal exception: ecode 0xr8001010ea

x\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packagWindows fatal exception: code 0x8001010e

es\cWindows fatal exception: code 0x8001010e

Windows fatal exception: hcode 0xi8001010em

erWindows fatal exception: acode 0xx8001010e\

opWindows fatal exception: ecode 0xn8001010e_

coWindows fatal exception: mcode 0xm8001010ea

ndWindows fatal exception: \code 0xd8001010ei

alWindows fatal exception: ocode 0xg8001010e.

py", line 135 in show_opWindows fatal exception: ecode 0xn8001010e_

filWindows fatal exception: ecode 0x_8001010ed

iaWindows fatal exception: lcode 0xo8001010eg


  File Windows fatal exception: "code 0xC8001010e:

\PWindows fatal exception: rcode 0xo8001010eg

raWindows fatal exception: mcode 0x 8001010eF

ilWindows fatal exception: ecode 0xs8001010e\

ChWindows fatal exception: icode 0xm8001010ee

raX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 135 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\open_command\dialog.py", line 107 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\ui\gui.py", line 301 in event_loop
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 867 in init
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\ChimeraX_main.py", line 1018 in 
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 87 in _run_code
  File "C:\Program Files\ChimeraX 1.3\bin\lib\runpy.py", line 197 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000022ec (most recent call first):
  File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\chimerax\mouse_modes\mousemodes.py", line 515 in _cursor_position
Windows fatal exception: access violation

===== Log before crash start =====
> cartoon style modeHelix default arrows false xsection oval width 1.5
> thickness 0.5

> ui tool show "Side View"

> view name 2

> select :610-627:575-589

514 atoms, 518 bonds, 66 residues, 2 models selected  

> show sel atoms

> show sel cartoons

> volume zone #2 nearAtoms #1 range 3

> surface zone #2 nearAtoms :610-627:575-589

> volume #2 level 0.008 style mesh

> volume #2 transparency 0.2

> volume #2 subdivideSurface true subdivisionLevels 1

> color sel #707aff

> color sel byhetero

> select clear

> volume #2 surfaceSmoothing true smoothingIterations 10 smoothingFactor 0.5

> setattr b radius 0.35

Assigning radius attribute to 6803 items  

> select #4:610-627:575-589

257 atoms, 259 bonds, 33 residues, 1 model selected  

> show sel atoms

> show sel cartoons

> volume zone #3 nearAtoms #4 range 3

> surface zone #3 nearAtoms #4:610-627:575-589

> volume #3 level 0.008 style mesh

> volume #3 transparency 0.2

> volume #3 subdivideSurface true subdivisionLevels 1

> color sel #707aff

> color sel byhetero

> select clear

> volume #3 surfaceSmoothing true smoothingIterations 10 smoothingFactor 0.5

> setattr b radius 0.35

Assigning radius attribute to 6803 items  

> hide #4 atoms

> hide #4 cartoons

> select #4:610-627:575-589

257 atoms, 259 bonds, 33 residues, 1 model selected  

> show sel atoms

> show sel cartoons

> volume zone #3 nearAtoms #4 range 3

> surface zone #3 nearAtoms #4:610-627:575-589

> volume #3 level 0.008 style mesh

> volume #3 transparency 0.2

> volume #3 subdivideSurface true subdivisionLevels 1

> color sel #707aff

> color sel byhetero

> select clear

> volume #3 surfaceSmoothing true smoothingIterations 10 smoothingFactor 0.5

> setattr b radius 0.35

Assigning radius attribute to 6803 items  

> view 2

> turn y 180

> save "C:/D_disk/new project/ATP7B/ATP7B_PAPER
> writing/Fig/Fig4/Fig4Aver2.cxs"

> turn y 180

> save "C:/D_disk/new project/ATP7B/ATP7B_PAPER
> writing/Fig/Fig4/Fig4Aver2-1.cxs"

> select #4:610-627:575-589

257 atoms, 259 bonds, 33 residues, 1 model selected  

> select ~sel

6434 atoms, 6544 bonds, 855 residues, 8 models selected  

> select clear

> hide #!3 models

> select #4:610-627:575-589

257 atoms, 259 bonds, 33 residues, 1 model selected  

> select ~sel

6434 atoms, 6544 bonds, 855 residues, 8 models selected  

> select clear

> hide #4 cartoons

> hide #4 atoms

> select #4:562-574:589-610:627-633

305 atoms, 307 bonds, 42 residues, 1 model selected  

> show sel atoms

> show sel cartoons

> volume zone #3 nearAtoms #4 range 3

> surface zone #3 nearAtoms #4:562-574:589-610:627-633

> volume #3 level 0.008 style mesh

> volume #3 transparency 0.2

> volume #3 subdivideSurface true subdivisionLevels 1

> color sel #707aff

> color sel byhetero

> select clear

> show #!3 models

> view 2

> turn y 180

> volume #3 level 0.01011

> view 2

> turn y 180

> show #4 cartoons

> turn y 180

> select #4:562-574:589-610:627-633

305 atoms, 307 bonds, 42 residues, 1 model selected  

> show sel atoms

> show sel cartoons

> volume zone #3 nearAtoms #4 range 3

> surface zone #3 nearAtoms #4:562-574:589-610:627-633

> volume #3 level 0.008 style mesh

> volume #3 transparency 0.2

> volume #3 subdivideSurface true subdivisionLevels 1

> color sel #707aff

> color sel byhetero

> select clear

> hide #4 cartoons

> hide #4 atoms

> select #4:562-574:589-610:627-633

305 atoms, 307 bonds, 42 residues, 1 model selected  

> show sel atoms

> show sel cartoons

> volume zone #3 nearAtoms #4 range 3

> surface zone #3 nearAtoms #4:562-574:589-610:627-633

> volume #3 level 0.008 style mesh

> volume #3 transparency 0.2

> volume #3 subdivideSurface true subdivisionLevels 1

> color sel #707aff

> color sel byhetero

> select clear

> save "C:/D_disk/new project/ATP7B/ATP7B_PAPER
> writing/Fig/Fig4/Fig4Aver2-2.cxs"

> save C:\Users\xly/Desktop/Fig4A-2.png width 2000 height 2000

> view name 2

> turn y 180

> save "C:/D_disk/new project/ATP7B/ATP7B_PAPER
> writing/Fig/Fig4/Fig4Aver2-2.cxs"


===== Log before crash end =====

Log:
UCSF ChimeraX version: 1.3 (2021-12-08)  
© 2016-2021 Regents of the University of California. All rights reserved.  

> open "C:\\\D_disk\\\new project\\\ATP7B\\\ATP7B_PAPER
> writing\\\Fig\\\Fig4\\\Fig4Aver2-1.cxs"

Opened ATOX1_j54_3.3_resmap.mrc as #2, grid size 240,240,240, pixel 1.01,
shown at level 0.008, step 1, values float32  
Opened Nter.mrc as #3, grid size 43,43,37, pixel 1.01,1.01,1.01, shown at
level 0.008, step 1, values float32  
Log from Mon Apr 4 10:20:29 2022UCSF ChimeraX version: 1.3 (2021-12-08)  
© 2016-2021 Regents of the University of California. All rights reserved.  

> open "C:\\\D_disk\\\new project\\\ATP7B\\\ATP7B_PAPER
> writing\\\Fig\\\Fig4\\\Fig4A.cxs"

Opened ATOX1_j54_3.3_resmap.mrc as #2, grid size 240,240,240, pixel 1.01,
shown at level 0.008, step 1, values float32  
Opened Nter.mrc as #3, grid size 43,43,37, pixel 1.01,1.01,1.01, shown at
level 0.0135, step 1, values float32  
Log from Sat Apr 2 22:12:59 2022UCSF ChimeraX version: 1.3 (2021-12-08)  
© 2016-2021 Regents of the University of California. All rights reserved.  

> open "C:\\\D_disk\\\new project\\\ATP7B\\\ATP7B_PAPER
> writing\\\Fig\\\Fig4\\\Fig4A.cxs"

Opened ATOX1_j54_3.3_resmap.mrc as #2, grid size 240,240,240, pixel 1.01,
shown at level 0.008, step 1, values float32  
Opened Nter.mrc as #3, grid size 43,43,37, pixel 1.01,1.01,1.01, shown at
level 0.0135, step 1, values float32  
Log from Sat Apr 2 20:25:54 2022UCSF ChimeraX version: 1.3 (2021-12-08)  
© 2016-2021 Regents of the University of California. All rights reserved.  

> open "C:\\\D_disk\\\new project\\\ATP7B\\\ATP7B_PAPER
> writing\\\Fig\\\Fig4\\\Fig4A.cxs"

Opened ATOX1_j54_3.3_resmap.mrc as #2, grid size 240,240,240, pixel 1.01,
shown at level 0.008, step 1, values float32  
Log from Sat Apr 2 17:28:30 2022UCSF ChimeraX version: 1.3 (2021-12-08)  
© 2016-2021 Regents of the University of California. All rights reserved.  

> open "C:\\\D_disk\\\new project\\\ATP7B\\\ATP7B_PAPER
> writing\\\Fig\\\Fig4\\\Fig4A.cxs"

Opened ATOX1_j54_3.3_resmap.mrc as #2, grid size 240,240,240, pixel 1.01,
shown at level 0.011, step 1, values float32  
Log from Fri Apr 1 00:21:43 2022 Startup Messages  
---  
note | available bundle cache has not been initialized yet  
  
UCSF ChimeraX version: 1.3 (2021-12-08)  
© 2016-2021 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open "C:/D_disk/new project/ATP7B/structure/this
> work/+ATOX1/ATP7B_ATOX1apo.pdb"

Chain information for ATP7B_ATOX1apo.pdb #1  
---  
Chain | Description  
A | No description available  
  

> open "C:/D_disk/new project/ATP7B/structure/this
> work/+ATOX1/ATOX1_j54_3.3_resmap.mrc"

Opened ATOX1_j54_3.3_resmap.mrc as #2, grid size 240,240,240, pixel 1.01,
shown at level 0.00171, step 1, values float32  

> hide #!2 models

> set bgColor white

> lighting simple

> select #1/A:563-632

522 atoms, 528 bonds, 70 residues, 1 model selected  

> select #1/A:563-632

522 atoms, 528 bonds, 70 residues, 1 model selected  

> show sel atoms

> view #1/A:563-632

> volume zone #2 nearAtoms #1 range 3

> surface zone #2 nearAtoms #1/A:563-632

> volume #2 level 0.038 style mesh

> color byhetero

> volume #2 transparency 0.2

> volume #2 subdivideSurface true subdivisionLevels 1

> show #!2 models

> volume #2 level 0.005836

> surface zone #2 enclose #1/A:563-632

Expected a keyword  

> volume #2 level 0.004

> volume #2 level 0.003

> volume #2 level 0.006574

> volume #2 level 0.01104

> volume #2 level 0.01193

> select clear

> setattr b radius 0.5

Assigning radius attribute to 6260 items  

> setattr b radius 0.35

Assigning radius attribute to 6260 items  

> hide

> show atoms

> select clear

> hide

> hide cartoons

> Fig4A

Unknown command: Fig4A  

> select #1/A:563-632

522 atoms, 528 bonds, 70 residues, 1 model selected  

> show sel atoms

> view #1/A:563-632

> volume zone #2 nearAtoms #1 range 3

> surface zone #2 nearAtoms #1/A:563-632

> volume #2 level 0.038 style mesh

> color byhetero

> volume #2 transparency 0.2

> volume #2 subdivideSurface true subdivisionLevels 1

> show sel cartoons

> color sel #71bbec

> color sel byhetero

> volume #2 level 0.01097

> select clear

> show cartoons

> select #1/A:563-632

522 atoms, 528 bonds, 70 residues, 1 model selected  

> select ~sel

5632 atoms, 5732 bonds, 746 residues, 3 models selected  

> hide #!2 models

> show #!2 models

> select clear

> hide cartoons

> hide atoms

> select #1/A:563-632

522 atoms, 528 bonds, 70 residues, 1 model selected  

> show sel atoms

> show sel cartoons

> view #1/A:563-632

> volume zone #2 nearAtoms #1 range 3

> surface zone #2 nearAtoms #1/A:563-632

> volume #2 level 0.011 style mesh

> volume #2 transparency 0.2

> volume #2 subdivideSurface true subdivisionLevels 1

> color sel #71bbec

> color sel byhetero

> select clear

> cartoon style modeHelix default arrows false xsection oval width 1.5
> thickness 0.5

> save "C:/D_disk/new project/ATP7B/ATP7B_PAPER writing/Fig/Fig4/Fig4A.cxs"

——— End of log from Fri Apr 1 00:21:43 2022 ———

opened ChimeraX session  

> show cartoons

> volume #2 level 0.01078

> select #1/A:563-632

522 atoms, 528 bonds, 70 residues, 1 model selected  

> volume zone #2 nearAtoms sel & #1 range 6.08

> cartoon style modeHelix default arrows false xsection oval width 1.5
> thickness 0.5

> select #1/A:563-632

522 atoms, 528 bonds, 70 residues, 1 model selected  

> show sel atoms

> show sel cartoons

> view #1/A:563-632

> volume zone #2 nearAtoms #1 range 3

> surface zone #2 nearAtoms #1/A:563-632

> volume #2 level 0.011 style mesh

> volume #2 transparency 0.2

> volume #2 subdivideSurface true subdivisionLevels 1

> color sel #71bbec

> color sel byhetero

> select clear

> cartoon style modeHelix default arrows false xsection oval width 1.5
> thickness 0.5

> select #1/A:563-633

531 atoms, 537 bonds, 71 residues, 1 model selected  

> show sel atoms

> show sel cartoons

> view #1/A:563-633

> volume zone #2 nearAtoms #1 range 3

> surface zone #2 nearAtoms #1/A:563-633

> volume #2 level 0.011 style mesh

> volume #2 transparency 0.2

> volume #2 subdivideSurface true subdivisionLevels 1

> color sel #71bbec

> color sel byhetero

> hide

> cartoon style modeHelix default arrows false xsection oval width 1.5
> thickness 0.5

> select #1/A:563-633

531 atoms, 537 bonds, 71 residues, 1 model selected  

> show sel atoms

> show sel cartoons

> view #1/A:563-633

> volume zone #2 nearAtoms #1 range 3

> surface zone #2 nearAtoms #1/A:563-633

> volume #2 level 0.011 style mesh

> volume #2 transparency 0.2

> volume #2 subdivideSurface true subdivisionLevels 1

> color sel #71bbec

> color sel byhetero

> hide

> select clear

> hide

> hide cartoons

[Repeated 1 time(s)]

> cartoon style modeHelix default arrows false xsection oval width 1.5
> thickness 0.5

> select #1/A:563-633

531 atoms, 537 bonds, 71 residues, 1 model selected  

> show sel atoms

> show sel cartoons

> view #1/A:563-633

> volume zone #2 nearAtoms #1 range 3

> surface zone #2 nearAtoms #1/A:563-633

> volume #2 level 0.011 style mesh

> volume #2 transparency 0.2

> volume #2 subdivideSurface true subdivisionLevels 1

> color sel #71bbec

> color sel byhetero

> surface dust #2 size 10.1

[Repeated 1 time(s)]

> hide cartoons

> cartoon style modeHelix default arrows false xsection oval width 1.5
> thickness 0.5

> select #1/A:563-633

531 atoms, 537 bonds, 71 residues, 1 model selected  

> show sel atoms

> show sel cartoons

> view #1/A:563-633

> volume zone #2 nearAtoms #1 range 3

> surface zone #2 nearAtoms #1/A:563-633

> volume #2 level 0.011 style mesh

> volume #2 transparency 0.2

> volume #2 subdivideSurface true subdivisionLevels 1

> color sel #71bbec

> color sel byhetero

> select clear

> volume #2 level 0.00765

> volume #2 surfaceSmoothing true smoothingIterations 10 smoothingFactor 0.5

> volume #2 level 0.007

> volume #2 level 0.008

> volume #2 level 0.0082

> volume #2 level 0.0083

> volume #2 level 0.009

> volume #2 level 0.008

> save "C:/D_disk/new project/ATP7B/ATP7B_PAPER writing/Fig/Fig4/Fig4A.cxs"

> hide cartoons

> cartoon style modeHelix default arrows false xsection oval width 1.5
> thickness 0.5

> select #1/A:563-633

531 atoms, 537 bonds, 71 residues, 1 model selected  

> show sel atoms

> show sel cartoons

> view #1/A:563-633

> volume zone #2 nearAtoms #1 range 3

> surface zone #2 nearAtoms #1/A:563-633

> volume #2 level 0.008 style mesh

> volume #2 transparency 0.2

> volume #2 subdivideSurface true subdivisionLevels 1

> color sel #ab77c0

> color sel byhetero

> select clear

> volume #2 surfaceSmoothing true smoothingIterations 10 smoothingFactor 0.5

> select clear

> save "C:/D_disk/new project/ATP7B/ATP7B_PAPER writing/Fig/Fig4/Fig4A.cxs"

——— End of log from Sat Apr 2 17:28:30 2022 ———

opened ChimeraX session  

> show cartoons

> hide #!2 models

> open "C:/D_disk/new project/ATP7B/ATP7B_PAPER writing/Fig/Fig4/Nter.mrc"

Opened Nter.mrc as #3, grid size 43,43,37, pixel 1.01,1.01,1.01, shown at
level 0.0281, step 1, values float32  

> volume #3 level 0.008

> volume #!3 style mesh

> surface dust #3 size 10.1

> volume #3 transparency 0.2

> volume #3 subdivideSurface true subdivisionLevels 1

> select clear

> volume #3 level 0.01024

> volume #3 level 0.008

> volume #3 level 0.009978

> volume #3 level 0.01406

> volume #3 level 0.012

> show #!2 models

> hide #!3 models

> hide #!2 models

> show #!3 models

> volume #3 level 0.01332

> volume #3 level 0.013

> volume #3 level 0.0133

> volume #3 level 0.01343

> volume #3 level 0.008686

> volume #!3 style surface

> volume #3 level 0.01132

> volume #!3 style mesh

> volume #3 level 0.0134

> name view 1

"1": invalid atom specifier  

> view name 1

> hide cartoons

> select #1/A:563-633

531 atoms, 537 bonds, 71 residues, 1 model selected  

> show sel atoms

> show sel cartoons

> select clear

> save "C:/D_disk/new project/ATP7B/ATP7B_PAPER writing/Fig/Fig4/Fig4A.cxs"

> volume #3 transparency 0.2

> save C:\Users\xly/Desktop/Fig4A-1.png width 2000 height 2000
> transparentBackground ture

Invalid "transparentBackground" argument: Expected true or false (or 1 or 0)  

> save C:\Users\xly/Desktop/Fig4A-1.png width 2000 height 2000
> transparentBackground true

[Repeated 1 time(s)]

> turn y 180

[Repeated 2 time(s)]

> select clear

> turn y 180

> volume #3 level 0.0135

> save C:\Users\xly/Desktop/Fig4A-1.png width 2000 height 2000
> transparentBackground true

> turn y 180

> save C:\Users\xly/Desktop/Fig4A-2.png width 2000 height 2000
> transparentBackground true

> turn y 180

> save C:\Users\xly/Desktop/Fig4A-1.png width 2000 height 2000
> transparentBackground true

> turn y 180

> save C:\Users\xly/Desktop/Fig4A-2.png width 2000 height 2000
> transparentBackground true

> turn y 180

[Repeated 6 time(s)]

> open "C:/D_disk/new project/ATP7B/ATP7B_PAPER writing/Fig/Fig4/Nter.pdb"

Chain information for Nter.pdb #4  
---  
Chain | Description  
A | No description available  
  

> hide #1 models

> color #4 #ab77c0 transparency 0

> show #4 atoms

> color #4 byhetero

> setattr b radius 0.4

Assigning radius attribute to 6803 items  

> setattr b radius 0.3

Assigning radius attribute to 6803 items  

> setattr b radius 0.35

Assigning radius attribute to 6803 items  

> color #4 byhetero

> turn y 180

[Repeated 11 time(s)]

> ui tool show "Side View"

> turn y 180

[Repeated 1 time(s)]

> save C:\Users\xly/Desktop/Fig4A-1.png width 2000 height 2000
> transparentBackground true

> turn y 180

> save C:\Users\xly/Desktop/Fig4A-2.png width 2000 height 2000
> transparentBackground true

> turn y 180

> turn y 90

> turn y 180

> view name 1

> turn y 180

[Repeated 1 time(s)]

> view name 1

> save C:\Users\xly/Desktop/Fig4A-1.png width 2000 height 2000
> transparentBackground true

> turn y 180

> save C:\Users\xly/Desktop/Fig4A-2.png width 2000 height 2000
> transparentBackground true

> save "C:/D_disk/new project/ATP7B/ATP7B_PAPER writing/Fig/Fig4/Fig4A.cxs"

——— End of log from Sat Apr 2 20:25:54 2022 ———

opened ChimeraX session  

> select #1/A:563-633

531 atoms, 537 bonds, 71 residues, 1 model selected  

> select #4/A:563-633

531 atoms, 537 bonds, 71 residues, 1 model selected  

> ui tool show "Color Actions"

> color sel medium blue

> color sel medium purple

> color sel #01ffffff

> color sel #0bffffff

> color sel #70ffffff

> color sel #7001ffff

> color sel #700cffff

> color sel #707affff

> color sel byhetero

> select clear

> save C:\Users\xly/Desktop/Fig4A-1.png width 2000 height 2000
> transparentBackground true

> turn y 180

> select #4/A:562-633

537 atoms, 543 bonds, 72 residues, 1 model selected  

> color sel #707aff

> color sel byhetero

> ui tool show "Side View"

> select clear

> save C:\Users\xly/Desktop/Fig4A-1.png width 2000 height 2000
> transparentBackground true

> turn y 180

> lighting full

[Repeated 4 time(s)]

> lighting shadows false

> lighting simple

> lighting shadows true

> lighting shadows false

> lighting full

> lighting shadows false

> lighting simple

> lighting full

> lighting simple

> lighting shadows true

> lighting shadows false

> lighting full

> lighting shadows false

> lighting simple

> lighting shadows true

> lighting shadows false

> save C:\Users\xly/Desktop/Fig4A-2.png width 2000 height 2000
> transparentBackground true

> lighting full

> lighting shadows false

> save C:\Users\xly/Desktop/Fig4A-22.png width 2000 height 2000
> transparentBackground true

> save "C:/D_disk/new project/ATP7B/ATP7B_PAPER writing/Fig/Fig4/Fig4A.cxs"

——— End of log from Sat Apr 2 22:12:59 2022 ———

opened ChimeraX session  

> cartoon style modeHelix default arrows false xsection oval width 1.5
> thickness 0.5

> ui tool show "Side View"

> view name 2

> select :610-627:575-589

514 atoms, 518 bonds, 66 residues, 2 models selected  

> show sel atoms

> show sel cartoons

> volume zone #2 nearAtoms #1 range 3

> surface zone #2 nearAtoms :610-627:575-589

> volume #2 level 0.008 style mesh

> volume #2 transparency 0.2

> volume #2 subdivideSurface true subdivisionLevels 1

> color sel #707aff

> color sel byhetero

> select clear

> volume #2 surfaceSmoothing true smoothingIterations 10 smoothingFactor 0.5

> setattr b radius 0.35

Assigning radius attribute to 6803 items  

> select #4:610-627:575-589

257 atoms, 259 bonds, 33 residues, 1 model selected  

> show sel atoms

> show sel cartoons

> volume zone #3 nearAtoms #4 range 3

> surface zone #3 nearAtoms #4:610-627:575-589

> volume #3 level 0.008 style mesh

> volume #3 transparency 0.2

> volume #3 subdivideSurface true subdivisionLevels 1

> color sel #707aff

> color sel byhetero

> select clear

> volume #3 surfaceSmoothing true smoothingIterations 10 smoothingFactor 0.5

> setattr b radius 0.35

Assigning radius attribute to 6803 items  

> hide #4 atoms

> hide #4 cartoons

> select #4:610-627:575-589

257 atoms, 259 bonds, 33 residues, 1 model selected  

> show sel atoms

> show sel cartoons

> volume zone #3 nearAtoms #4 range 3

> surface zone #3 nearAtoms #4:610-627:575-589

> volume #3 level 0.008 style mesh

> volume #3 transparency 0.2

> volume #3 subdivideSurface true subdivisionLevels 1

> color sel #707aff

> color sel byhetero

> select clear

> volume #3 surfaceSmoothing true smoothingIterations 10 smoothingFactor 0.5

> setattr b radius 0.35

Assigning radius attribute to 6803 items  

> view 2

> turn y 180

> save "C:/D_disk/new project/ATP7B/ATP7B_PAPER
> writing/Fig/Fig4/Fig4Aver2.cxs"

> turn y 180

[Repeated 1 time(s)]

> save "C:/D_disk/new project/ATP7B/ATP7B_PAPER
> writing/Fig/Fig4/Fig4Aver2-1.cxs"

——— End of log from Mon Apr 4 10:20:29 2022 ———

opened ChimeraX session  




OpenGL version: 3.3.0 - Build 22.20.16.4749
OpenGL renderer: Intel(R) HD Graphics 620
OpenGL vendor: Intel
Manufacturer: HP
Model: HP Pavilion x360 Convertible
OS: Microsoft Windows 10 家庭中文版 (Build 19042)
Memory: 8,456,323,072
MaxProcessMemory: 137,438,953,344
CPU: 4 Intel(R) Core(TM) i5-7200U CPU @ 2.50GHz
OSLanguage: zh-CN
Locale: ('zh_CN', 'cp936')
PyQt5 5.15.2, Qt 5.15.2
Installed Packages:
    alabaster: 0.7.12
    appdirs: 1.4.4
    Babel: 2.9.1
    backcall: 0.2.0
    blockdiag: 2.0.1
    certifi: 2021.10.8
    cftime: 1.5.1.1
    charset-normalizer: 2.0.9
    ChimeraX-AddCharge: 1.2.2
    ChimeraX-AddH: 2.1.11
    ChimeraX-AlignmentAlgorithms: 2.0
    ChimeraX-AlignmentHdrs: 3.2
    ChimeraX-AlignmentMatrices: 2.0
    ChimeraX-Alignments: 2.2.3
    ChimeraX-AlphaFold: 1.0
    ChimeraX-AltlocExplorer: 1.0.1
    ChimeraX-AmberInfo: 1.0
    ChimeraX-Arrays: 1.0
    ChimeraX-Atomic: 1.31
    ChimeraX-AtomicLibrary: 4.2
    ChimeraX-AtomSearch: 2.0
    ChimeraX-AtomSearchLibrary: 1.0
    ChimeraX-AxesPlanes: 2.0
    ChimeraX-BasicActions: 1.1
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 2.0
    ChimeraX-BondRot: 2.0
    ChimeraX-BugReporter: 1.0
    ChimeraX-BuildStructure: 2.6.1
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.1
    ChimeraX-ButtonPanel: 1.0
    ChimeraX-CageBuilder: 1.0
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.2
    ChimeraX-ChemGroup: 2.0
    ChimeraX-Clashes: 2.2.2
    ChimeraX-ColorActions: 1.0
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-ColorKey: 1.5
    ChimeraX-CommandLine: 1.1.5
    ChimeraX-ConnectStructure: 2.0
    ChimeraX-Contacts: 1.0
    ChimeraX-Core: 1.3
    ChimeraX-CoreFormats: 1.1
    ChimeraX-coulombic: 1.3.2
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-CrystalContacts: 1.0
    ChimeraX-DataFormats: 1.2.2
    ChimeraX-Dicom: 1.0
    ChimeraX-DistMonitor: 1.1.5
    ChimeraX-DistUI: 1.0
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ExperimentalCommands: 1.0
    ChimeraX-FileHistory: 1.0
    ChimeraX-FunctionKey: 1.0
    ChimeraX-Geometry: 1.1
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.1
    ChimeraX-Hbonds: 2.1.2
    ChimeraX-Help: 1.2
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.1
    ChimeraX-ImageFormats: 1.2
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0.1
    ChimeraX-ItemsInspection: 1.0
    ChimeraX-Label: 1.1
    ChimeraX-ListInfo: 1.1.1
    ChimeraX-Log: 1.1.4
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Maestro: 1.8.1
    ChimeraX-Map: 1.1
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0
    ChimeraX-MapFilter: 2.0
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.1
    ChimeraX-Markers: 1.0
    ChimeraX-Mask: 1.0
    ChimeraX-MatchMaker: 2.0.4
    ChimeraX-MDcrds: 2.6
    ChimeraX-MedicalToolbar: 1.0.1
    ChimeraX-Meeting: 1.0
    ChimeraX-MLP: 1.1
    ChimeraX-mmCIF: 2.4
    ChimeraX-MMTF: 2.1
    ChimeraX-Modeller: 1.2.6
    ChimeraX-ModelPanel: 1.2.1
    ChimeraX-ModelSeries: 1.0
    ChimeraX-Mol2: 2.0
    ChimeraX-Morph: 1.0
    ChimeraX-MouseModes: 1.1
    ChimeraX-Movie: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nucleotides: 2.0.2
    ChimeraX-OpenCommand: 1.7
    ChimeraX-PDB: 2.6.5
    ChimeraX-PDBBio: 1.0
    ChimeraX-PDBLibrary: 1.0.2
    ChimeraX-PDBMatrices: 1.0
    ChimeraX-PickBlobs: 1.0
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.0.1
    ChimeraX-PubChem: 2.1
    ChimeraX-ReadPbonds: 1.0.1
    ChimeraX-Registration: 1.1
    ChimeraX-RemoteControl: 1.0
    ChimeraX-ResidueFit: 1.0
    ChimeraX-RestServer: 1.1
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 2.0.1
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.5
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0
    ChimeraX-SelInspector: 1.0
    ChimeraX-SeqView: 2.4.6
    ChimeraX-Shape: 1.0.1
    ChimeraX-Shell: 1.0
    ChimeraX-Shortcuts: 1.1
    ChimeraX-ShowAttr: 1.0
    ChimeraX-ShowSequences: 1.0
    ChimeraX-SideView: 1.0
    ChimeraX-Smiles: 2.1
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.6.1
    ChimeraX-STL: 1.0
    ChimeraX-Storm: 1.0
    ChimeraX-Struts: 1.0
    ChimeraX-Surface: 1.0
    ChimeraX-SwapAA: 2.0
    ChimeraX-SwapRes: 2.1
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.1
    ChimeraX-ToolshedUtils: 1.2
    ChimeraX-Tug: 1.0
    ChimeraX-UI: 1.13.7
    ChimeraX-uniprot: 2.2
    ChimeraX-UnitCell: 1.0
    ChimeraX-ViewDockX: 1.0.1
    ChimeraX-VIPERdb: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0
    ChimeraX-WebServices: 1.0
    ChimeraX-Zone: 1.0
    colorama: 0.4.4
    comtypes: 1.1.10
    cxservices: 1.1
    cycler: 0.11.0
    Cython: 0.29.24
    decorator: 5.1.0
    docutils: 0.17.1
    filelock: 3.0.12
    funcparserlib: 0.3.6
    grako: 3.16.5
    h5py: 3.6.0
    html2text: 2020.1.16
    idna: 3.3
    ihm: 0.21
    imagecodecs: 2021.4.28
    imagesize: 1.3.0
    ipykernel: 5.5.5
    ipython: 7.23.1
    ipython-genutils: 0.2.0
    jedi: 0.18.0
    Jinja2: 3.0.1
    jupyter-client: 6.1.12
    jupyter-core: 4.9.1
    kiwisolver: 1.3.2
    lxml: 4.6.3
    lz4: 3.1.3
    MarkupSafe: 2.0.1
    matplotlib: 3.4.3
    matplotlib-inline: 0.1.3
    msgpack: 1.0.2
    netCDF4: 1.5.7
    networkx: 2.6.3
    numexpr: 2.8.0
    numpy: 1.21.2
    openvr: 1.16.801
    packaging: 21.3
    ParmEd: 3.2.0
    parso: 0.8.3
    pickleshare: 0.7.5
    Pillow: 8.3.2
    pip: 21.2.4
    pkginfo: 1.7.1
    prompt-toolkit: 3.0.23
    psutil: 5.8.0
    pycollada: 0.7.1
    pydicom: 2.1.2
    Pygments: 2.10.0
    PyOpenGL: 3.1.5
    PyOpenGL-accelerate: 3.1.5
    pyparsing: 3.0.6
    PyQt5-commercial: 5.15.2
    PyQt5-sip: 12.8.1
    PyQtWebEngine-commercial: 5.15.2
    python-dateutil: 2.8.2
    pytz: 2021.3
    pywin32: 228
    pyzmq: 22.3.0
    qtconsole: 5.1.1
    QtPy: 1.11.3
    RandomWords: 0.3.0
    requests: 2.26.0
    scipy: 1.7.1
    setuptools: 57.5.0
    sfftk-rw: 0.7.1
    six: 1.16.0
    snowballstemmer: 2.2.0
    sortedcontainers: 2.4.0
    Sphinx: 4.2.0
    sphinx-autodoc-typehints: 1.12.0
    sphinxcontrib-applehelp: 1.0.2
    sphinxcontrib-blockdiag: 2.0.0
    sphinxcontrib-devhelp: 1.0.2
    sphinxcontrib-htmlhelp: 2.0.0
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 1.0.3
    sphinxcontrib-serializinghtml: 1.1.5
    suds-jurko: 0.6
    tables: 3.6.1
    tifffile: 2021.4.8
    tinyarray: 1.2.3
    tornado: 6.1
    traitlets: 5.1.1
    urllib3: 1.26.7
    wcwidth: 0.2.5
    webcolors: 1.11.1
    wheel: 0.37.0
    wheel-filename: 1.3.0
    WMI: 1.5.1

Change History (2)

comment:1 by Eric Pettersen, 4 years ago

Component: Unassigned → Platform
Owner: set to Eric Pettersen
Platform: → all
Project: → ChimeraX
Status: new → accepted
Summary: ChimeraX bug report submission → Crash using File→Open on Windows and/or in return statement

comment:2 by Eric Pettersen, 4 years ago

Cc: Tom Goddard added

Hi Lingyi,

Thanks for reporting this problem. We feel that it may be fixed in the latest daily builds. Please try a daily build and if the crash happens again, just report it again. Thank you.

--Eric

Eric Pettersen
UCSF Computer Graphics Lab

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