Opened 4 years ago

Closed 4 years ago

Last modified 4 years ago

#6212 closed defect (nonchimerax)

Fragmented image when molecule and surface is clipped

Reported by: pengshuman@… Owned by: Tom Goddard
Priority: normal Milestone:
Component: Graphics Version:
Keywords: Cc: Elaine Meng
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description

Hello,I'm a student of Zhejiang University in China.

When I select clip,I found that the function of clip has some problems.

I'm sorry,I can't describe this issue in words.Just show my picture when I want to use clip:

Although I download ChimeraX again,this issue still exist. Therefore, I have no choice but to ask for your help.

I guess maybe some parameters are incorrect,and I need to run the modified command to ChimeraX.

I'm looking forward to your reply.

Sincerely,Shuman Peng.

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Attachments (1)

1645346806123.png (266.1 KB ) - added by pengshuman@… 4 years ago.
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Change History (4)

by pengshuman@…, 4 years ago

Attachment: 1645346806123.png added

Added by email2trac

comment:1 by Eric Pettersen, 4 years ago

Cc: Elaine Meng added
Component: UnassignedGraphics
Owner: set to Tom Goddard
Platform: all
Project: ChimeraX
Status: newassigned

Not sure if this is a bug or a chimerax-users question.

comment:2 by Tom Goddard, 4 years ago

Resolution: nonchimerax
Status: assignedclosed

The image you sent appears to be an atomic model with a surface colored by hydrophobicity (blue and yellow), clipped, but with horrible image quality. My guess is that the poor image is a defect of your computer's graphics driver. Updating the graphics driver may fix it. Saving a ChimeraX session (*.cxs) file and trying it on another computer is another solution.

If you want us to look further at it you could provide us a ChimeraX session file. You could save the session, then use ChimeraX menu entry Help / Report a Bug... and attach that session file to the bug report. This would also tell us what operating system, graphics driver, and ChimeraX version you are using.

comment:3 by Tom Goddard, 4 years ago

Summary: Problems about the function of clipFragmented image when molecule and surface is clipped
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