![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
#6057 closed defect (nonchimerax)
Graphics driver crash, macOS 10.15.7, AMD Radeon Pro 560X
| Reported by: | Owned by: | Tom Goddard | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Graphics | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: macOS-10.15.7-x86_64-i386-64bit
ChimeraX Version: 1.2.5 (2021-05-24 04:13:57 UTC)
Description
Last time you used ChimeraX it crashed.
No udea why it crashed. The program was in the background, I wasn't using it.
Fatal Python error: Aborted
Current thread 0x0000000110017dc0 (most recent call first):
File "/Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/chimerax/ui/gui.py", line 293 in event_loop
File "/Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/ChimeraX_main.py", line 866 in init
File "/Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/ChimeraX_main.py", line 1015 in
File "/Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/runpy.py", line 87 in _run_code
File "/Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/runpy.py", line 194 in _run_module_as_main
Process: ChimeraX [595]
Path: /Applications/ChimeraX-1.2.5.app/Contents/MacOS/ChimeraX
Identifier: ChimeraX
Version: 1.2.5 (1.2.5.0)
Code Type: X86-64 (Native)
Parent Process: ??? [1]
Responsible: ChimeraX [595]
User ID: 501
Date/Time: 2022-02-01 13:30:37.530 +0200
OS Version: Mac OS X 10.15.7 (19H1615)
Report Version: 12
Bridge OS Version: 6.1 (19P647)
Anonymous UUID: C82306F2-4C6D-1686-C7A1-E3DF544C3809
Sleep/Wake UUID: 2C1C55D3-E348-447E-B4F2-CA7782BB6DED
Time Awake Since Boot: 900000 seconds
Time Since Wake: 8600 seconds
System Integrity Protection: enabled
Crashed Thread: 0 CrBrowserMain Dispatch queue: com.apple.main-thread
Exception Type: EXC_CRASH (SIGABRT)
Exception Codes: 0x0000000000000000, 0x0000000000000000
Exception Note: EXC_CORPSE_NOTIFY
Application Specific Information:
abort() called
Application Specific Signatures:
Graphics kernel error: 0xfffffff9
Thread 0 Crashed:: CrBrowserMain Dispatch queue: com.apple.main-thread
0 libsystem_kernel.dylib 0x00007fff69c3433a __pthread_kill + 10
1 libsystem_pthread.dylib 0x00007fff69cf0e60 pthread_kill + 430
2 libsystem_c.dylib 0x00007fff69b4b93e raise + 26
3 libsystem_platform.dylib 0x00007fff69ce55fd _sigtramp + 29
4 ??? 000000000000000000 0 + 0
5 libsystem_c.dylib 0x00007fff69bbb808 abort + 120
6 libGPUSupportMercury.dylib 0x00007fff511240a5 gpusGenerateCrashLog.cold.1 + 95
7 libGPUSupportMercury.dylib 0x00007fff5111b18f gpusGenerateCrashLog + 89
8 com.apple.AMDRadeonX4000GLDriver 0x000000013212ccd1 gpusKillClientExt + 9
9 libGPUSupportMercury.dylib 0x00007fff5111c55b gpusSubmitDataBuffers + 164
10 com.apple.AMDRadeonX4000GLDriver 0x0000000132107857 glrATI_Hwl_SubmitPacketsWithToken + 91
11 com.apple.AMDRadeonX4000GLDriver 0x000000013215f512 gldPresentFramebufferData + 83
12 GLEngine 0x00007fff3a7e08d1 glSwap_Exec + 97
13 com.apple.opengl 0x00007fff3a7c2473 CGLFlushDrawable + 59
14 com.apple.AppKit 0x00007fff2d4a1faa -[NSOpenGLContext flushBuffer] + 20
15 libqcocoa.dylib 0x0000000130f7df5d QCocoaGLContext::swapBuffers(QPlatformSurface*) + 541
16 QtGui 0x000000012324913c QOpenGLContext::swapBuffers(QSurface*) + 412
17 QtGui 0x00000001234f0280 QPlatformBackingStore::composeAndFlush(QWindow*, QRegion const&, QPoint const&, QPlatformTextureList*, bool) + 4592
18 QtWidgets 0x0000000122b9ca74 QWidgetRepaintManager::flush(QWidget*, QRegion const&, QPlatformTextureList*) + 1028
19 QtWidgets 0x0000000122b9c4b3 QWidgetRepaintManager::sync(QWidget*, QRegion const&) + 707
20 QtWidgets 0x0000000122beba54 QWidgetWindow::handleExposeEvent(QExposeEvent*) + 372
21 QtWidgets 0x0000000122be8a46 QWidgetWindow::event(QEvent*) + 1094
22 QtWidgets 0x0000000122b909ea QApplicationPrivate::notify_helper(QObject*, QEvent*) + 266
23 QtWidgets 0x0000000122b91e11 QApplication::notify(QObject*, QEvent*) + 497
24 QtWidgets.abi3.so 0x0000000122743db9 sipQApplication::notify(QObject*, QEvent*) + 233
25 QtCore 0x000000012056aa34 QCoreApplication::notifyInternal2(QObject*, QEvent*) + 212
26 QtGui 0x00000001232017f2 QGuiApplicationPrivate::processExposeEvent(QWindowSystemInterfacePrivate::ExposeEvent*) + 306
27 QtGui 0x00000001231dd8f3 bool QWindowSystemInterfacePrivate::handleWindowSystemEvent(QWindowSystemInterfacePrivate::WindowSystemEvent*) + 115
28 QtGui 0x00000001231e4f92 void QWindowSystemInterface::handleExposeEvent(QWindow*, QRegion const&) + 178
29 libqcocoa.dylib 0x0000000130f4620c QCocoaWindow::handleExposeEvent(QRegion const&) + 460
30 libqcocoa.dylib 0x0000000130f4eafb -[QNSView(Drawing) displayLayer:] + 907
31 com.apple.QuartzCore 0x00007fff3b7a83e0 -[CALayer display] + 180
32 com.apple.AppKit 0x00007fff2d7f882c -[_NSOpenGLViewBackingLayer display] + 133
33 com.apple.QuartzCore 0x00007fff3b7a7cad CA::Layer::display_if_needed(CA::Transaction*) + 757
34 com.apple.QuartzCore 0x00007fff3b785fca CA::Context::commit_transaction(CA::Transaction*, double) + 334
35 com.apple.QuartzCore 0x00007fff3b784bb4 CA::Transaction::commit() + 644
36 com.apple.AppKit 0x00007fff2d2982f1 __62+[CATransaction(NSCATransaction) NS_setFlushesWithDisplayLink]_block_invoke + 266
37 com.apple.AppKit 0x00007fff2d9b6c20 ___NSRunLoopObserverCreateWithHandler_block_invoke + 41
38 com.apple.CoreFoundation 0x00007fff2fe84c65 __CFRUNLOOP_IS_CALLING_OUT_TO_AN_OBSERVER_CALLBACK_FUNCTION__ + 23
39 com.apple.CoreFoundation 0x00007fff2fe84b97 __CFRunLoopDoObservers + 457
40 com.apple.CoreFoundation 0x00007fff2fe84135 __CFRunLoopRun + 874
41 com.apple.CoreFoundation 0x00007fff2fe8376e CFRunLoopRunSpecific + 462
42 com.apple.HIToolbox 0x00007fff2eaafaad RunCurrentEventLoopInMode + 292
43 com.apple.HIToolbox 0x00007fff2eaaf7c5 ReceiveNextEventCommon + 584
44 com.apple.HIToolbox 0x00007fff2eaaf569 _BlockUntilNextEventMatchingListInModeWithFilter + 64
45 com.apple.AppKit 0x00007fff2d0f8659 _DPSNextEvent + 883
46 com.apple.AppKit 0x00007fff2d0f6ea0 -[NSApplication(NSEvent) _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 1352
47 com.apple.AppKit 0x00007fff2d0e8bae -[NSApplication run] + 658
48 libqcocoa.dylib 0x0000000130f5d62f QCocoaEventDispatcher::processEvents(QFlags) + 2495
49 QtCore 0x0000000120566acf QEventLoop::exec(QFlags) + 431
50 QtCore 0x000000012056b042 QCoreApplication::exec() + 130
51 QtWidgets.abi3.so 0x0000000122835702 meth_QApplication_exec_(_object*, _object*) + 82
52 org.python.python 0x000000010edc30c2 cfunction_call_varargs + 290
53 org.python.python 0x000000010edc2a85 _PyObject_MakeTpCall + 373
54 org.python.python 0x000000010ee91665 call_function + 533
55 org.python.python 0x000000010ee8e46e _PyEval_EvalFrameDefault + 25678
56 org.python.python 0x000000010edc33d0 function_code_fastcall + 128
57 org.python.python 0x000000010edc5a9a method_vectorcall + 170
58 org.python.python 0x000000010ee9160c call_function + 444
59 org.python.python 0x000000010ee8e46e _PyEval_EvalFrameDefault + 25678
60 org.python.python 0x000000010ee92454 _PyEval_EvalCodeWithName + 2804
61 org.python.python 0x000000010edc356e _PyFunction_Vectorcall + 270
62 org.python.python 0x000000010ee9160c call_function + 444
63 org.python.python 0x000000010ee8e505 _PyEval_EvalFrameDefault + 25829
64 org.python.python 0x000000010ee92454 _PyEval_EvalCodeWithName + 2804
65 org.python.python 0x000000010ee87f44 PyEval_EvalCode + 100
66 org.python.python 0x000000010ee85332 builtin_exec + 626
67 org.python.python 0x000000010edff5ff cfunction_vectorcall_FASTCALL + 175
68 org.python.python 0x000000010ee9160c call_function + 444
69 org.python.python 0x000000010ee8e505 _PyEval_EvalFrameDefault + 25829
70 org.python.python 0x000000010ee92454 _PyEval_EvalCodeWithName + 2804
71 org.python.python 0x000000010edc356e _PyFunction_Vectorcall + 270
72 org.python.python 0x000000010ee9160c call_function + 444
73 org.python.python 0x000000010ee8e505 _PyEval_EvalFrameDefault + 25829
74 org.python.python 0x000000010ee92454 _PyEval_EvalCodeWithName + 2804
75 org.python.python 0x000000010edc356e _PyFunction_Vectorcall + 270
76 org.python.python 0x000000010edc2dad PyVectorcall_Call + 109
77 org.python.python 0x000000010eef4eb3 pymain_run_module + 195
78 org.python.python 0x000000010eef4585 Py_RunMain + 1413
79 org.python.python 0x000000010eef4bdf pymain_main + 223
80 org.python.python 0x000000010eef4aeb Py_Main + 43
81 edu.ucsf.cgl.ChimeraX 0x000000010ed9bdc8 main + 120
82 libdyld.dylib 0x00007fff69aeccc9 start + 1
Thread 1:: ThreadPoolServiceThread
0 libsystem_kernel.dylib 0x00007fff69c36b96 kevent64 + 10
1 QtWebEngineCore 0x000000012674fe6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x000000012674fcc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x00000001266d862b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x000000012669c7cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x00000001266e3a94 base::internal::ServiceThread::Run(base::RunLoop*) + 20
6 QtWebEngineCore 0x00000001266f7a7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x0000000126740e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff69cf1109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff69cecb8b thread_start + 15
Thread 2:: ThreadPoolBackgroundWorker
0 libsystem_kernel.dylib 0x00007fff69c2ddfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff69c2e170 mach_msg + 60
2 QtWebEngineCore 0x0000000126745492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001266ed778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x00000001266ee150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x00000001266edc44 base::internal::WorkerThread::RunBackgroundPooledWorker() + 20
6 QtWebEngineCore 0x0000000126740e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff69cf1109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff69cecb8b thread_start + 15
Thread 3:: Chrome_IOThread
0 libsystem_kernel.dylib 0x00007fff69c36b96 kevent64 + 10
1 QtWebEngineCore 0x000000012674fe6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x000000012674fcc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x00000001266d862b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x000000012669c7cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x000000012a61cf06 content::BrowserProcessSubThread::IOThreadRun(base::RunLoop*) + 102
6 QtWebEngineCore 0x00000001266f7a7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x0000000126740e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff69cf1109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff69cecb8b thread_start + 15
Thread 4:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff69c2ddfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff69c2e170 mach_msg + 60
2 QtWebEngineCore 0x0000000126745492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001267452cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000012666d1db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x00000001266d862b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x000000012669c7cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x00000001266f7a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x0000000126740e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff69cf1109 _pthread_start + 148
10 libsystem_pthread.dylib 0x00007fff69cecb8b thread_start + 15
Thread 5:: CompositorTileWorker1
0 libsystem_kernel.dylib 0x00007fff69c30882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff69cf1425 _pthread_cond_wait + 698
2 QtWebEngineCore 0x000000012673ce18 base::ConditionVariable::Wait() + 104
3 QtWebEngineCore 0x00000001279f45f8 non-virtual thunk to cc::SingleThreadTaskGraphRunner::Run() + 56
4 QtWebEngineCore 0x0000000126740e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
5 libsystem_pthread.dylib 0x00007fff69cf1109 _pthread_start + 148
6 libsystem_pthread.dylib 0x00007fff69cecb8b thread_start + 15
Thread 6:: Chrome_InProcGpuThread
0 libsystem_kernel.dylib 0x00007fff69c2ddfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff69c2e170 mach_msg + 60
2 QtWebEngineCore 0x0000000126745492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000012666d20f base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 223
4 QtWebEngineCore 0x00000001266d862b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
5 QtWebEngineCore 0x000000012669c7cb base::RunLoop::Run() + 395
6 QtWebEngineCore 0x00000001266f7a7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x0000000126740e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff69cf1109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff69cecb8b thread_start + 15
Thread 7:: Chrome_ChildIOThread
0 libsystem_kernel.dylib 0x00007fff69c36b96 kevent64 + 10
1 QtWebEngineCore 0x000000012674fe6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x000000012674fcc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x00000001266d862b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x000000012669c7cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x00000001266f7a7d base::Thread::ThreadMain() + 413
6 QtWebEngineCore 0x0000000126740e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff69cf1109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff69cecb8b thread_start + 15
Thread 8:: VizCompositorThread
0 libsystem_kernel.dylib 0x00007fff69c2ddfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff69c2e170 mach_msg + 60
2 QtWebEngineCore 0x0000000126745492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001267452cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000012666d1db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x00000001266d862b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x000000012669c7cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x00000001266f7a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x0000000126740e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff69cf1109 _pthread_start + 148
10 libsystem_pthread.dylib 0x00007fff69cecb8b thread_start + 15
Thread 9:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff69c2ddfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff69c2e170 mach_msg + 60
2 QtWebEngineCore 0x0000000126745492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001267452cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000012666d1db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x00000001266d862b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x000000012669c7cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x00000001266f7a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x0000000126740e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff69cf1109 _pthread_start + 148
10 libsystem_pthread.dylib 0x00007fff69cecb8b thread_start + 15
Thread 10:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff69c2ddfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff69c2e170 mach_msg + 60
2 QtWebEngineCore 0x0000000126745492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001267452cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000012666d1db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x00000001266d862b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x000000012669c7cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x00000001266f7a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x0000000126740e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff69cf1109 _pthread_start + 148
10 libsystem_pthread.dylib 0x00007fff69cecb8b thread_start + 15
Thread 11:: ThreadPoolSingleThreadForegroundBlocking0
0 libsystem_kernel.dylib 0x00007fff69c2ddfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff69c2e170 mach_msg + 60
2 QtWebEngineCore 0x0000000126745492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001267452cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001266ed76a base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 42
5 QtWebEngineCore 0x00000001266ee150 base::internal::WorkerThread::RunWorker() + 1024
6 QtWebEngineCore 0x00000001266edd34 base::internal::WorkerThread::RunDedicatedWorker() + 20
7 QtWebEngineCore 0x0000000126740e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff69cf1109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff69cecb8b thread_start + 15
Thread 12:: MemoryInfra
0 libsystem_kernel.dylib 0x00007fff69c2ddfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff69c2e170 mach_msg + 60
2 QtWebEngineCore 0x0000000126745492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001267452cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000012666d1db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x00000001266d862b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x000000012669c7cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x00000001266f7a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x0000000126740e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff69cf1109 _pthread_start + 148
10 libsystem_pthread.dylib 0x00007fff69cecb8b thread_start + 15
Thread 13:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff69c2ddfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff69c2e170 mach_msg + 60
2 QtWebEngineCore 0x0000000126745492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001267452cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000012666d1db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x00000001266d862b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x000000012669c7cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x00000001266f7a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x0000000126740e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff69cf1109 _pthread_start + 148
10 libsystem_pthread.dylib 0x00007fff69cecb8b thread_start + 15
Thread 14:: com.apple.NSEventThread
0 libsystem_kernel.dylib 0x00007fff69c2ddfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff69c2e170 mach_msg + 60
2 com.apple.CoreFoundation 0x00007fff2fe85825 __CFRunLoopServiceMachPort + 247
3 com.apple.CoreFoundation 0x00007fff2fe842f2 __CFRunLoopRun + 1319
4 com.apple.CoreFoundation 0x00007fff2fe8376e CFRunLoopRunSpecific + 462
5 com.apple.AppKit 0x00007fff2d299ea4 _NSEventThread + 132
6 libsystem_pthread.dylib 0x00007fff69cf1109 _pthread_start + 148
7 libsystem_pthread.dylib 0x00007fff69cecb8b thread_start + 15
Thread 15:: ThreadPoolSingleThreadSharedBackgroundBlocking1
0 libsystem_kernel.dylib 0x00007fff69c2ddfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff69c2e170 mach_msg + 60
2 QtWebEngineCore 0x0000000126745492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001267452cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001266ed76a base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 42
5 QtWebEngineCore 0x00000001266ede3d base::internal::WorkerThread::RunWorker() + 237
6 QtWebEngineCore 0x00000001266edc74 base::internal::WorkerThread::RunBackgroundSharedWorker() + 20
7 QtWebEngineCore 0x0000000126740e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff69cf1109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff69cecb8b thread_start + 15
Thread 16:
0 libsystem_kernel.dylib 0x00007fff69c30882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff69cf1425 _pthread_cond_wait + 698
2 libopenblas.0.dylib 0x000000011038b27b blas_thread_server + 507
3 libsystem_pthread.dylib 0x00007fff69cf1109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff69cecb8b thread_start + 15
Thread 17:
0 libsystem_kernel.dylib 0x00007fff69c30882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff69cf1425 _pthread_cond_wait + 698
2 libopenblas.0.dylib 0x000000011038b27b blas_thread_server + 507
3 libsystem_pthread.dylib 0x00007fff69cf1109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff69cecb8b thread_start + 15
Thread 18:
0 libsystem_kernel.dylib 0x00007fff69c30882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff69cf1425 _pthread_cond_wait + 698
2 libopenblas.0.dylib 0x000000011038b27b blas_thread_server + 507
3 libsystem_pthread.dylib 0x00007fff69cf1109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff69cecb8b thread_start + 15
Thread 19:
0 libsystem_kernel.dylib 0x00007fff69c30882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff69cf1425 _pthread_cond_wait + 698
2 libopenblas.0.dylib 0x000000011038b27b blas_thread_server + 507
3 libsystem_pthread.dylib 0x00007fff69cf1109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff69cecb8b thread_start + 15
Thread 20:
0 libsystem_kernel.dylib 0x00007fff69c30882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff69cf1425 _pthread_cond_wait + 698
2 libopenblas.0.dylib 0x000000011038b27b blas_thread_server + 507
3 libsystem_pthread.dylib 0x00007fff69cf1109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff69cecb8b thread_start + 15
Thread 21:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff69c2ddfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff69c2e170 mach_msg + 60
2 QtWebEngineCore 0x0000000126745492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001266ed778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x00000001266ee150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x00000001266edcd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x0000000126740e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff69cf1109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff69cecb8b thread_start + 15
Thread 22:
0 libsystem_pthread.dylib 0x00007fff69cecb68 start_wqthread + 0
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x0000000110017dc0 rcx: 0x00007fa56b84aa58 rdx: 0x0000000000000000
rdi: 0x0000000000000307 rsi: 0x0000000000000006 rbp: 0x00007fa56b84aa80 rsp: 0x00007fa56b84aa58
r8: 0x00007fa56b84af48 r9: 0x2cf532fe073f4a3a r10: 0x0000000110017dc0 r11: 0x0000000000000246
r12: 0x0000000000000307 r13: 0x00006000030bb600 r14: 0x0000000000000006 r15: 0x0000000000000016
rip: 0x00007fff69c3433a rfl: 0x0000000000000246 cr2: 0x000000010efd97e0
Logical CPU: 0
Error Code: 0x02000148
Trap Number: 133
Binary Images:
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0x7fff68a38000 - 0x7fff68a50fff libresolv.9.dylib (67.40.1) /usr/lib/libresolv.9.dylib
0x7fff68a52000 - 0x7fff68a96ff7 libsandbox.1.dylib (1217.141.7) /usr/lib/libsandbox.1.dylib
0x7fff68a97000 - 0x7fff68aa9ff7 libsasl2.2.dylib (213.120.1) /usr/lib/libsasl2.2.dylib
0x7fff68aaa000 - 0x7fff68aabff7 libspindump.dylib (281.3) /usr/lib/libspindump.dylib
0x7fff68aac000 - 0x7fff68c96ff7 libsqlite3.dylib (308.6) /usr/lib/libsqlite3.dylib
0x7fff68d8a000 - 0x7fff68db7ffb libssl.46.dylib (47.140.2) /usr/lib/libssl.46.dylib
0x7fff68e8c000 - 0x7fff68ee6ff8 libusrtcp.dylib (1880.120.4) /usr/lib/libusrtcp.dylib
0x7fff68ee7000 - 0x7fff68eeaffb libutil.dylib (57) /usr/lib/libutil.dylib
0x7fff68eeb000 - 0x7fff68ef8ff7 libxar.1.dylib (425.5) /usr/lib/libxar.1.dylib
0x7fff68ef9000 - 0x7fff68efdfff libxcselect.dylib (2373) /usr/lib/libxcselect.dylib
0x7fff68efe000 - 0x7fff68fe0fff libxml2.2.dylib (33.9) /usr/lib/libxml2.2.dylib
0x7fff68fe4000 - 0x7fff6900cfff libxslt.1.dylib (16.12) /usr/lib/libxslt.1.dylib
0x7fff6900d000 - 0x7fff6901fff3 libz.1.dylib (76) /usr/lib/libz.1.dylib
0x7fff698ce000 - 0x7fff698d3ff3 libcache.dylib (83) /usr/lib/system/libcache.dylib
0x7fff698d4000 - 0x7fff698dffff libcommonCrypto.dylib (60165.120.1) /usr/lib/system/libcommonCrypto.dylib
0x7fff698e0000 - 0x7fff698e7fff libcompiler_rt.dylib (101.2) /usr/lib/system/libcompiler_rt.dylib
0x7fff698e8000 - 0x7fff698f1ff7 libcopyfile.dylib (166.40.1) /usr/lib/system/libcopyfile.dylib
0x7fff698f2000 - 0x7fff69984fdb libcorecrypto.dylib (866.140.2) /usr/lib/system/libcorecrypto.dylib
0x7fff69a91000 - 0x7fff69ad1ff0 libdispatch.dylib (1173.100.2) /usr/lib/system/libdispatch.dylib
0x7fff69ad2000 - 0x7fff69b08fff libdyld.dylib (750.7) /usr/lib/system/libdyld.dylib
0x7fff69b09000 - 0x7fff69b09ffb libkeymgr.dylib (30) /usr/lib/system/libkeymgr.dylib
0x7fff69b0a000 - 0x7fff69b16ff3 libkxld.dylib (6153.141.50) /usr/lib/system/libkxld.dylib
0x7fff69b17000 - 0x7fff69b17ff7 liblaunch.dylib (1738.140.3) /usr/lib/system/liblaunch.dylib
0x7fff69b18000 - 0x7fff69b1dff7 libmacho.dylib (959.0.1) /usr/lib/system/libmacho.dylib
0x7fff69b1e000 - 0x7fff69b20ff3 libquarantine.dylib (110.40.5) /usr/lib/system/libquarantine.dylib
0x7fff69b21000 - 0x7fff69b22ff7 libremovefile.dylib (48) /usr/lib/system/libremovefile.dylib
0x7fff69b23000 - 0x7fff69b3aff3 libsystem_asl.dylib (377.60.3) /usr/lib/system/libsystem_asl.dylib
0x7fff69b3b000 - 0x7fff69b3bff7 libsystem_blocks.dylib (74) /usr/lib/system/libsystem_blocks.dylib
0x7fff69b3c000 - 0x7fff69bc3fff libsystem_c.dylib (1353.100.4) /usr/lib/system/libsystem_c.dylib
0x7fff69bc4000 - 0x7fff69bc7ffb libsystem_configuration.dylib (1061.141.2) /usr/lib/system/libsystem_configuration.dylib
0x7fff69bc8000 - 0x7fff69bcbfff libsystem_coreservices.dylib (114.1) /usr/lib/system/libsystem_coreservices.dylib
0x7fff69bcc000 - 0x7fff69bd4fff libsystem_darwin.dylib (1353.100.4) /usr/lib/system/libsystem_darwin.dylib
0x7fff69bd5000 - 0x7fff69bdcfff libsystem_dnssd.dylib (1096.100.3) /usr/lib/system/libsystem_dnssd.dylib
0x7fff69bdd000 - 0x7fff69bdeffb libsystem_featureflags.dylib (17) /usr/lib/system/libsystem_featureflags.dylib
0x7fff69bdf000 - 0x7fff69c2cff7 libsystem_info.dylib (538) /usr/lib/system/libsystem_info.dylib
0x7fff69c2d000 - 0x7fff69c59ff7 libsystem_kernel.dylib (6153.141.50) /usr/lib/system/libsystem_kernel.dylib
0x7fff69c5a000 - 0x7fff69ca1fff libsystem_m.dylib (3178) /usr/lib/system/libsystem_m.dylib
0x7fff69ca2000 - 0x7fff69cc9fff libsystem_malloc.dylib (283.100.6) /usr/lib/system/libsystem_malloc.dylib
0x7fff69cca000 - 0x7fff69cd7ffb libsystem_networkextension.dylib (1095.140.2) /usr/lib/system/libsystem_networkextension.dylib
0x7fff69cd8000 - 0x7fff69ce1ff7 libsystem_notify.dylib (241.100.2) /usr/lib/system/libsystem_notify.dylib
0x7fff69ce2000 - 0x7fff69ceafef libsystem_platform.dylib (220.100.1) /usr/lib/system/libsystem_platform.dylib
0x7fff69ceb000 - 0x7fff69cf5fff libsystem_pthread.dylib (416.100.3) /usr/lib/system/libsystem_pthread.dylib
0x7fff69cf6000 - 0x7fff69cfaff3 libsystem_sandbox.dylib (1217.141.7) /usr/lib/system/libsystem_sandbox.dylib
0x7fff69cfb000 - 0x7fff69cfdfff libsystem_secinit.dylib (62.100.2) /usr/lib/system/libsystem_secinit.dylib
0x7fff69cfe000 - 0x7fff69d05ffb libsystem_symptoms.dylib (1238.120.2) /usr/lib/system/libsystem_symptoms.dylib
0x7fff69d06000 - 0x7fff69d1cff2 libsystem_trace.dylib (1147.120.1) /usr/lib/system/libsystem_trace.dylib
0x7fff69d1e000 - 0x7fff69d23ff7 libunwind.dylib (35.4) /usr/lib/system/libunwind.dylib
0x7fff69d24000 - 0x7fff69d59ffe libxpc.dylib (1738.140.3) /usr/lib/system/libxpc.dylib
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 1548
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 856382
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=1.1G resident=0K(0%) swapped_out_or_unallocated=1.1G(100%)
Writable regions: Total=10.0G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=10.0G(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 640K 5
Activity Tracing 256K 1
CG backing stores 1160K 2
CG image 644K 43
CoreAnimation 960K 41
CoreGraphics 8K 1
CoreImage 32K 4
CoreUI image data 3756K 32
Foundation 36K 2
Kernel Alloc Once 8K 1
MALLOC 9.4G 4990
MALLOC guard page 32K 8
MALLOC_LARGE (reserved) 384K 1 reserved VM address space (unallocated)
Mach message 32K 6
OpenGL GLSL 384K 5
STACK GUARD 88K 22
Stack 131.7M 23
Stack Guard 56.0M 1
VM_ALLOCATE 216.1M 487
VM_ALLOCATE (reserved) 224.0M 3 reserved VM address space (unallocated)
__DATA 68.7M 648
__DATA_CONST 128K 6
__FONT_DATA 4K 1
__GLSLBUILTINS 5176K 1
__LINKEDIT 492.5M 210
__OBJC_RO 32.3M 1
__OBJC_RW 1904K 1
__TEXT 651.1M 591
__UNICODE 564K 1
mapped file 524.8M 123
shared memory 2972K 26
=========== ======= =======
TOTAL 11.8G 7287
TOTAL, minus reserved VM space 11.6G 7287
Log:
UCSF ChimeraX version: 1.2.5 (2021-05-24)
© 2016-2021 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 ATI-3.10.23
OpenGL renderer: AMD Radeon Pro 560X OpenGL Engine
OpenGL vendor: ATI Technologies Inc.Hardware:
Hardware Overview:
Model Name: MacBook Pro
Model Identifier: MacBookPro15,1
Processor Name: 6-Core Intel Core i7
Processor Speed: 2.2 GHz
Number of Processors: 1
Total Number of Cores: 6
L2 Cache (per Core): 256 KB
L3 Cache: 9 MB
Hyper-Threading Technology: Enabled
Memory: 16 GB
Boot ROM Version: 1715.60.5.0.0 (iBridge: 19.16.10647.0.0,0)
Software:
System Software Overview:
System Version: macOS 10.15.7 (19H1615)
Kernel Version: Darwin 19.6.0
Time since boot: 23 days 3:10
Graphics/Displays:
Intel UHD Graphics 630:
Chipset Model: Intel UHD Graphics 630
Type: GPU
Bus: Built-In
VRAM (Dynamic, Max): 1536 MB
Vendor: Intel
Device ID: 0x3e9b
Revision ID: 0x0000
Automatic Graphics Switching: Supported
gMux Version: 5.0.0
Metal: Supported, feature set macOS GPUFamily2 v1
Radeon Pro 560X:
Chipset Model: Radeon Pro 560X
Type: GPU
Bus: PCIe
PCIe Lane Width: x8
VRAM (Total): 4 GB
Vendor: AMD (0x1002)
Device ID: 0x67ef
Revision ID: 0x00c2
ROM Revision: 113-C980AL-075
VBIOS Version: 113-C97501U-005
EFI Driver Version: 01.A1.075
Automatic Graphics Switching: Supported
gMux Version: 5.0.0
Metal: Supported, feature set macOS GPUFamily2 v1
Displays:
Color LCD:
Display Type: Built-In Retina LCD
Resolution: 2880 x 1800 Retina
Framebuffer Depth: 24-Bit Color (ARGB8888)
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: No
Connection Type: Internal
Locale: (None, 'UTF-8')
PyQt5 5.15.2, Qt 5.15.2
Installed Packages:
alabaster: 0.7.12
appdirs: 1.4.4
appnope: 0.1.2
Babel: 2.9.1
backcall: 0.2.0
blockdiag: 2.0.1
certifi: 2020.12.5
cftime: 1.5.0
chardet: 3.0.4
ChimeraX-AddCharge: 1.0.1
ChimeraX-AddH: 2.1.6
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.1
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.13.2
ChimeraX-AtomicLibrary: 3.1.3
ChimeraX-AtomSearch: 2.0
ChimeraX-AtomSearchLibrary: 1.0
ChimeraX-AxesPlanes: 2.0
ChimeraX-BasicActions: 1.1
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 1.1
ChimeraX-BondRot: 2.0
ChimeraX-BugReporter: 1.0
ChimeraX-BuildStructure: 2.5.2
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.1
ChimeraX-ButtonPanel: 1.0
ChimeraX-CageBuilder: 1.0
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.1
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.1
ChimeraX-ColorActions: 1.0
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.2.1
ChimeraX-CommandLine: 1.1.4
ChimeraX-ConnectStructure: 2.0
ChimeraX-Contacts: 1.0
ChimeraX-Core: 1.2.5
ChimeraX-CoreFormats: 1.0
ChimeraX-coulombic: 1.1.1
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0
ChimeraX-DataFormats: 1.1
ChimeraX-Dicom: 1.0
ChimeraX-DistMonitor: 1.1.3
ChimeraX-DistUI: 1.0
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0
ChimeraX-FunctionKey: 1.0
ChimeraX-Geometry: 1.1
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.0
ChimeraX-Hbonds: 2.1
ChimeraX-Help: 1.1
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.0
ChimeraX-ImageFormats: 1.1
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-Label: 1.0
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.2
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.1
ChimeraX-Map: 1.0.2
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.0
ChimeraX-Markers: 1.0
ChimeraX-Mask: 1.0
ChimeraX-MatchMaker: 1.2.1
ChimeraX-MDcrds: 2.2
ChimeraX-MedicalToolbar: 1.0.1
ChimeraX-Meeting: 1.0
ChimeraX-MLP: 1.1
ChimeraX-mmCIF: 2.3
ChimeraX-MMTF: 2.1
ChimeraX-Modeller: 1.0.1
ChimeraX-ModelPanel: 1.0.1
ChimeraX-ModelSeries: 1.0
ChimeraX-Mol2: 2.0
ChimeraX-Morph: 1.0
ChimeraX-MouseModes: 1.1
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0.1
ChimeraX-OpenCommand: 1.5
ChimeraX-PDB: 2.4.1
ChimeraX-PDBBio: 1.0
ChimeraX-PDBLibrary: 1.0.1
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.0.1
ChimeraX-PubChem: 2.0.1
ChimeraX-ReadPbonds: 1.0
ChimeraX-Registration: 1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-ResidueFit: 1.0
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.4
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SeqView: 2.3
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0
ChimeraX-Shortcuts: 1.0
ChimeraX-ShowAttr: 1.0
ChimeraX-ShowSequences: 1.0
ChimeraX-SideView: 1.0
ChimeraX-Smiles: 2.0.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.3.1
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-Struts: 1.0
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0
ChimeraX-SwapRes: 2.1
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.0.1
ChimeraX-ToolshedUtils: 1.2
ChimeraX-Tug: 1.0
ChimeraX-UI: 1.7.6
ChimeraX-uniprot: 2.1
ChimeraX-UnitCell: 1.0
ChimeraX-ViewDockX: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0
ChimeraX-WebServices: 1.0
ChimeraX-Zone: 1.0
colorama: 0.4.3
comtypes: 1.1.7
cxservices: 1.0
cycler: 0.10.0
Cython: 0.29.21
decorator: 5.0.9
distlib: 0.3.1
docutils: 0.16
filelock: 3.0.12
funcparserlib: 0.3.6
grako: 3.16.5
h5py: 2.10.0
html2text: 2020.1.16
idna: 2.10
ihm: 0.17
imagecodecs: 2020.5.30
imagesize: 1.2.0
ipykernel: 5.3.4
ipython: 7.18.1
ipython-genutils: 0.2.0
jedi: 0.17.2
Jinja2: 2.11.2
jupyter-client: 6.1.7
jupyter-core: 4.7.1
kiwisolver: 1.3.1
line-profiler: 2.1.2
lxml: 4.6.2
lz4: 3.1.0
MarkupSafe: 2.0.1
matplotlib: 3.3.2
matplotlib-inline: 0.1.2
msgpack: 1.0.0
netCDF4: 1.5.4
networkx: 2.5
numexpr: 2.7.3
numpy: 1.19.2
numpydoc: 1.1.0
openvr: 1.14.1501
packaging: 20.9
ParmEd: 3.2.0
parso: 0.7.1
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 7.2.0
pip: 21.0.1
pkginfo: 1.5.0.1
prompt-toolkit: 3.0.18
psutil: 5.7.2
ptyprocess: 0.7.0
pycollada: 0.7.1
pydicom: 2.0.0
Pygments: 2.7.1
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 2.4.7
PyQt5-commercial: 5.15.2
PyQt5-sip: 12.8.1
PyQtWebEngine-commercial: 5.15.2
python-dateutil: 2.8.1
pytz: 2021.1
pyzmq: 22.0.3
qtconsole: 4.7.7
QtPy: 1.9.0
RandomWords: 0.3.0
requests: 2.24.0
scipy: 1.5.2
setuptools: 50.3.2
sfftk-rw: 0.6.7.dev1
six: 1.15.0
snowballstemmer: 2.1.0
sortedcontainers: 2.2.2
Sphinx: 3.2.1
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 2.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 2.0.0
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.5
suds-jurko: 0.6
tables: 3.6.1
tifffile: 2020.9.3
tinyarray: 1.2.3
tornado: 6.1
traitlets: 5.0.5
urllib3: 1.25.11
wcwidth: 0.2.5
webcolors: 1.11.1
wheel: 0.36.0
wheel-filename: 1.3.0
Change History (3)
comment:1 by , 4 years ago
| Component: | Unassigned → Graphics |
|---|---|
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → assigned |
| Summary: | ChimeraX bug report submission → Graphics kernel error |
comment:2 by , 4 years ago
| Resolution: | → nonchimerax |
|---|---|
| Status: | assigned → closed |
The Qt window toolkit that ChimeraX uses was trying to repaint part of the user interface (maybe you uncovered part of the ChimeraX window by hiding or moving another application). Then Qt crashed in the Mac OpenGL graphics driver. Unfortunately Apple's OpenGL graphics drivers are unstable especially when lots of graphics memory is being used. ChimeraX was using 12 Gbytes of memory at the time of the crash, so probably you had a lot of data open.
There is nothing we can do to fix Apple's unstable graphics drivers. The new Apple computers with M1 CPU/GPU have been much better with no observed driver crashes.
More details here
https://www.rbvi.ucsf.edu/chimerax/docs/troubleshoot.html#maccrash
comment:3 by , 4 years ago
| Summary: | Graphics kernel error → Graphics driver crash, macOS 10.15.7, AMD Radeon Pro 560X |
|---|
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Reported by Dror Noy