![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 4 years ago
Closed 4 years ago
#5827 closed defect (can't reproduce)
Crash in event loop
| Reported by: | Owned by: | pett | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Core | Version: | |
| Keywords: | Cc: | Tom Goddard | |
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: macOS-10.16-x86_64-i386-64bit
ChimeraX Version: 1.3 (2021-12-08 23:08:33 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Fatal Python error: Aborted
Current thread 0x0000000112afbe00 (most recent call first):
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/ui/gui.py", line 301 in event_loop
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/ChimeraX_main.py", line 867 in init
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/ChimeraX_main.py", line 1018 in
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 87 in _run_code
File "/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 197 in _run_module_as_main
Process: ChimeraX [20650]
Path: /Applications/ChimeraX-1.3.app/Contents/MacOS/ChimeraX
Identifier: edu.ucsf.cgl.ChimeraX
Version: 1.3.0 (1.3.0.0)
Code Type: X86-64 (Native)
Parent Process: ??? [1]
Responsible: ChimeraX [20650]
User ID: 502
Date/Time: 2021-12-23 09:05:39.485 +0000
OS Version: macOS 11.6 (20G165)
Report Version: 12
Anonymous UUID: 7EAC39F2-F359-CFD4-244F-DCA698C2FF3C
Sleep/Wake UUID: 5641474F-B32B-478C-B69C-A725DD6D4184
Time Awake Since Boot: 290000 seconds
Time Since Wake: 65000 seconds
System Integrity Protection: enabled
Crashed Thread: 0 CrBrowserMain Dispatch queue: com.apple.main-thread
Exception Type: EXC_CRASH (SIGABRT)
Exception Codes: 0x0000000000000000, 0x0000000000000000
Exception Note: EXC_CORPSE_NOTIFY
Application Specific Information:
abort() called
ChimeraX(20650,0x112afbe00) malloc: Heap corruption detected, free list is damaged at 0x600003f52a90
*** Incorrect guard value: 181891742575247
Thread 0 Crashed:: CrBrowserMain Dispatch queue: com.apple.main-thread
0 libsystem_kernel.dylib 0x00007fff2033292e __pthread_kill + 10
1 libsystem_pthread.dylib 0x00007fff203615bd pthread_kill + 263
2 libsystem_c.dylib 0x00007fff20245bd5 raise + 26
3 libsystem_platform.dylib 0x00007fff203a6d7d _sigtramp + 29
4 ??? 000000000000000000 0 + 0
5 libsystem_c.dylib 0x00007fff202b6406 abort + 125
6 libsystem_malloc.dylib 0x00007fff20196165 malloc_vreport + 548
7 libsystem_malloc.dylib 0x00007fff201aa7e9 malloc_zone_error + 183
8 libsystem_malloc.dylib 0x00007fff20188f53 nanov2_allocate_from_block + 583
9 libsystem_malloc.dylib 0x00007fff20188500 nanov2_allocate + 130
10 libsystem_malloc.dylib 0x00007fff2018842d nanov2_malloc + 56
11 libsystem_malloc.dylib 0x00007fff201a2f3b _malloc_zone_malloc + 118
12 libc++abi.dylib 0x00007fff2032682a operator new(unsigned long) + 26
13 QtWebEngineCore 0x0000000113bd2850 mojo::core::HandleTable::AddDispatcher(scoped_refptr) + 240
14 QtWebEngineCore 0x0000000113bc9e1c mojo::core::Core::CreateTrap(void (*)(MojoTrapEvent const*), MojoCreateTrapOptions const*, unsigned int*) + 156
15 QtWebEngineCore 0x0000000115d011a8 mojo::CreateTrap(void (*)(MojoTrapEvent const*), mojo::ScopedHandleBase*) + 24
16 QtWebEngineCore 0x0000000115cfede2 mojo::HandleSignalTracker::HandleSignalTracker(mojo::Handle, unsigned int, scoped_refptr) + 114
17 QtWebEngineCore 0x0000000115ce22be mojo::Connector::WaitToReadMore() + 446
18 QtWebEngineCore 0x0000000115ce1fa5 mojo::Connector::Connector(mojo::ScopedHandleBase, mojo::Connector::ConnectorConfig, scoped_refptr) + 533
19 QtWebEngineCore 0x0000000115ce9c3a mojo::internal::MultiplexRouter::MultiplexRouter(mojo::ScopedHandleBase, mojo::internal::MultiplexRouter::Config, bool, scoped_refptr) + 186
20 QtWebEngineCore 0x0000000115ce17ff mojo::internal::BindingStateBase::BindInternal(mojo::internal::PendingReceiverState*, scoped_refptr, char const*, std::__1::unique_ptr >, bool, bool, mojo::MessageReceiverWithResponderStatus*, unsigned int) + 175
21 QtWebEngineCore 0x0000000119826e79 mojo::Receiver >::BindNewPipeAndPassRemote(scoped_refptr) + 217
22 QtWebEngineCore 0x0000000119824947 content::InputRouterImpl::BindNewHost() + 55
23 QtWebEngineCore 0x00000001198a5cee content::RenderWidgetHostImpl::SetWidget(mojo::PendingRemote) + 302
24 QtWebEngineCore 0x00000001196b930c content::RenderFrameHostImpl::SetRenderFrameCreated(bool) + 428
25 QtWebEngineCore 0x00000001196ba675 content::RenderFrameHostImpl::CreateRenderFrame(int, int, int, int) + 1765
26 QtWebEngineCore 0x00000001196e2436 content::RenderFrameHostManager::CreateSpeculativeRenderFrame(content::SiteInstance*) + 886
27 QtWebEngineCore 0x00000001196dfbf7 content::RenderFrameHostManager::CreateSpeculativeRenderFrameHost(content::SiteInstance*, content::SiteInstance*) + 119
28 QtWebEngineCore 0x00000001196df34f content::RenderFrameHostManager::GetFrameHostForNavigation(content::NavigationRequest*) + 575
29 QtWebEngineCore 0x00000001196df0e7 content::RenderFrameHostManager::DidCreateNavigationRequest(content::NavigationRequest*) + 55
30 QtWebEngineCore 0x0000000119681029 content::FrameTreeNode::CreatedNavigationRequest(std::__1::unique_ptr >) + 201
31 QtWebEngineCore 0x00000001196ad776 content::NavigatorImpl::OnBeginNavigation(content::FrameTreeNode*, mojo::StructPtr, mojo::StructPtr, scoped_refptr, mojo::PendingAssociatedRemote, mojo::PendingRemote, scoped_refptr, std::__1::unique_ptr >) + 422
32 QtWebEngineCore 0x00000001196c4e38 content::RenderFrameHostImpl::BeginNavigation(mojo::StructPtr, mojo::StructPtr, mojo::PendingRemote, mojo::PendingAssociatedRemote, mojo::PendingRemote) + 1336
33 QtWebEngineCore 0x00000001135cfd9b content::mojom::FrameHostStubDispatch::Accept(content::mojom::FrameHost*, mojo::Message*) + 3147
34 QtWebEngineCore 0x0000000115ce6469 mojo::InterfaceEndpointClient::HandleValidatedMessage(mojo::Message*) + 649
35 QtWebEngineCore 0x0000000115ce8af6 mojo::MessageDispatcher::Accept(mojo::Message*) + 118
36 QtWebEngineCore 0x0000000115ffc3a6 IPC::(anonymous namespace)::ChannelAssociatedGroupController::AcceptOnProxyThread(mojo::Message) + 134
37 QtWebEngineCore 0x0000000115ffa183 base::internal::Invoker, mojo::Message>, void ()>::RunOnce(base::internal::BindStateBase*) + 67
38 QtWebEngineCore 0x00000001155dcd6f base::TaskAnnotator::RunTask(char const*, base::PendingTask*) + 255
39 QtWebEngineCore 0x00000001155f1096 base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::DoWorkImpl(base::sequence_manager::LazyNow*, bool*) + 374
40 QtWebEngineCore 0x00000001155f0e04 base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::DoWork() + 132
41 QtWebEngineCore 0x0000000112b53da7 QtWebEngineCore::MessagePumpForUIQt::handleScheduledWork() + 55
42 QtCore 0x000000010ca4b85f QObject::event(QEvent*) + 111
43 QtWidgets 0x000000010f3b99ea QApplicationPrivate::notify_helper(QObject*, QEvent*) + 266
44 QtWidgets 0x000000010f3bae11 QApplication::notify(QObject*, QEvent*) + 497
45 QtWidgets.abi3.so 0x000000010ef6cdb9 sipQApplication::notify(QObject*, QEvent*) + 233
46 QtCore 0x000000010ca20a34 QCoreApplication::notifyInternal2(QObject*, QEvent*) + 212
47 QtCore 0x000000010ca21d79 QCoreApplicationPrivate::sendPostedEvents(QObject*, int, QThreadData*) + 809
48 libqcocoa.dylib 0x000000011141c259 QCocoaEventDispatcherPrivate::processPostedEvents() + 313
49 libqcocoa.dylib 0x000000011141c9c8 QCocoaEventDispatcherPrivate::postedEventsSourceCallback(void*) + 40
50 com.apple.CoreFoundation 0x00007fff204592bc __CFRUNLOOP_IS_CALLING_OUT_TO_A_SOURCE0_PERFORM_FUNCTION__ + 17
51 com.apple.CoreFoundation 0x00007fff20459224 __CFRunLoopDoSource0 + 180
52 com.apple.CoreFoundation 0x00007fff20458fa4 __CFRunLoopDoSources0 + 242
53 com.apple.CoreFoundation 0x00007fff204579cc __CFRunLoopRun + 893
54 com.apple.CoreFoundation 0x00007fff20456f8c CFRunLoopRunSpecific + 563
55 com.apple.HIToolbox 0x00007fff2869f1f3 RunCurrentEventLoopInMode + 292
56 com.apple.HIToolbox 0x00007fff2869ef55 ReceiveNextEventCommon + 587
57 com.apple.HIToolbox 0x00007fff2869ecf3 _BlockUntilNextEventMatchingListInModeWithFilter + 70
58 com.apple.AppKit 0x00007fff22c60172 _DPSNextEvent + 864
59 com.apple.AppKit 0x00007fff22c5e945 -[NSApplication(NSEvent) _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 1364
60 com.apple.AppKit 0x00007fff22c50c69 -[NSApplication run] + 586
61 libqcocoa.dylib 0x000000011141b62f QCocoaEventDispatcher::processEvents(QFlags) + 2495
62 QtCore 0x000000010ca1cacf QEventLoop::exec(QFlags) + 431
63 QtCore 0x000000010ca21042 QCoreApplication::exec() + 130
64 QtWidgets.abi3.so 0x000000010f05e702 meth_QApplication_exec_(_object*, _object*) + 82
65 org.python.python 0x000000010330b06d cfunction_call + 125
66 org.python.python 0x00000001032cc17d _PyObject_MakeTpCall + 365
67 org.python.python 0x00000001033a461c call_function + 876
68 org.python.python 0x00000001033a1ab3 _PyEval_EvalFrameDefault + 25219
69 org.python.python 0x00000001032cc948 function_code_fastcall + 104
70 org.python.python 0x00000001032ce98a method_vectorcall + 202
71 org.python.python 0x00000001033a458c call_function + 732
72 org.python.python 0x00000001033a1ab3 _PyEval_EvalFrameDefault + 25219
73 org.python.python 0x00000001033a5283 _PyEval_EvalCode + 2611
74 org.python.python 0x00000001032cc8d1 _PyFunction_Vectorcall + 289
75 org.python.python 0x00000001033a458c call_function + 732
76 org.python.python 0x00000001033a1b4b _PyEval_EvalFrameDefault + 25371
77 org.python.python 0x00000001033a5283 _PyEval_EvalCode + 2611
78 org.python.python 0x000000010339b70b PyEval_EvalCode + 139
79 org.python.python 0x0000000103398592 builtin_exec + 626
80 org.python.python 0x000000010330a86a cfunction_vectorcall_FASTCALL + 218
81 org.python.python 0x00000001033a458c call_function + 732
82 org.python.python 0x00000001033a1b4b _PyEval_EvalFrameDefault + 25371
83 org.python.python 0x00000001033a5283 _PyEval_EvalCode + 2611
84 org.python.python 0x00000001032cc8d1 _PyFunction_Vectorcall + 289
85 org.python.python 0x00000001033a458c call_function + 732
86 org.python.python 0x00000001033a1b4b _PyEval_EvalFrameDefault + 25371
87 org.python.python 0x00000001033a5283 _PyEval_EvalCode + 2611
88 org.python.python 0x00000001032cc8d1 _PyFunction_Vectorcall + 289
89 org.python.python 0x000000010340ae20 pymain_run_module + 208
90 org.python.python 0x000000010340a537 Py_RunMain + 1431
91 org.python.python 0x000000010340ab3f pymain_main + 223
92 org.python.python 0x000000010340aa4b Py_Main + 43
93 edu.ucsf.cgl.ChimeraX 0x0000000103282dc8 main + 120
94 libdyld.dylib 0x00007fff2037cf3d start + 1
Thread 1:
0 libsystem_kernel.dylib 0x00007fff2032ecde __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff20361e49 _pthread_cond_wait + 1298
2 libopenblas.0.dylib 0x0000000103f54a9f blas_thread_server + 207
3 libsystem_pthread.dylib 0x00007fff203618fc _pthread_start + 224
4 libsystem_pthread.dylib 0x00007fff2035d443 thread_start + 15
Thread 2:: ThreadPoolServiceThread
0 libsystem_kernel.dylib 0x00007fff203351d2 kevent64 + 10
1 QtWebEngineCore 0x0000000115668e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x0000000115668cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x00000001155f162b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x00000001155b57cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x00000001155fca94 base::internal::ServiceThread::Run(base::RunLoop*) + 20
6 QtWebEngineCore 0x0000000115610a7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x0000000115659e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff203618fc _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff2035d443 thread_start + 15
Thread 3:: ThreadPoolBackgroundWorker
0 libsystem_kernel.dylib 0x00007fff2032c2ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2032c62c mach_msg + 60
2 QtWebEngineCore 0x000000011565e492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x0000000115606778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x0000000115607150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x0000000115606c44 base::internal::WorkerThread::RunBackgroundPooledWorker() + 20
6 QtWebEngineCore 0x0000000115659e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff203618fc _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff2035d443 thread_start + 15
Thread 4:: Chrome_IOThread
0 libsystem_kernel.dylib 0x00007fff2032e4ca __psynch_mutexwait + 10
1 libsystem_pthread.dylib 0x00007fff2035f2ab _pthread_mutex_firstfit_lock_wait + 76
2 libsystem_pthread.dylib 0x00007fff2035d192 _pthread_mutex_firstfit_lock_slow + 204
3 QtWebEngineCore 0x0000000115656088 base::internal::LockImpl::Lock() + 72
4 QtWebEngineCore 0x0000000113bc9e01 mojo::core::Core::CreateTrap(void (*)(MojoTrapEvent const*), MojoCreateTrapOptions const*, unsigned int*) + 129
5 QtWebEngineCore 0x0000000115d011a8 mojo::CreateTrap(void (*)(MojoTrapEvent const*), mojo::ScopedHandleBase*) + 24
6 QtWebEngineCore 0x0000000115ce2171 mojo::Connector::WaitToReadMore() + 113
7 QtWebEngineCore 0x0000000115ce1fa5 mojo::Connector::Connector(mojo::ScopedHandleBase, mojo::Connector::ConnectorConfig, scoped_refptr) + 533
8 QtWebEngineCore 0x0000000115ce9c3a mojo::internal::MultiplexRouter::MultiplexRouter(mojo::ScopedHandleBase, mojo::internal::MultiplexRouter::Config, bool, scoped_refptr) + 186
9 QtWebEngineCore 0x0000000115ce17ff mojo::internal::BindingStateBase::BindInternal(mojo::internal::PendingReceiverState*, scoped_refptr, char const*, std::__1::unique_ptr >, bool, bool, mojo::MessageReceiverWithResponderStatus*, unsigned int) + 175
10 QtWebEngineCore 0x0000000119116644 mojo::Receiver >::Receiver(service_manager::mojom::InterfaceProvider*, mojo::PendingReceiver, scoped_refptr) + 164
11 QtWebEngineCore 0x00000001197757fc content::(anonymous namespace)::InterfaceFilterImpl::Create(std::__1::set, std::__1::allocator >, std::__1::less, std::__1::allocator > >, std::__1::allocator, std::__1::allocator > > >, mojo::PendingReceiver, mojo::PendingRemote) + 284
12 QtWebEngineCore 0x0000000119775e85 void base::internal::FunctorTraits, std::__1::allocator >, std::__1::less, std::__1::allocator > >, std::__1::allocator, std::__1::allocator > > >, mojo::PendingReceiver, mojo::PendingRemote), void>::Invoke, std::__1::allocator >, std::__1::less, std::__1::allocator > >, std::__1::allocator, std::__1::allocator > > >, mojo::PendingReceiver, mojo::PendingRemote), std::__1::set, std::__1::allocator >, std::__1::less, std::__1::allocator > >, std::__1::allocator, std::__1::allocator > > >, mojo::PendingReceiver, mojo::PendingRemote >(void (*&&)(std::__1::set, std::__1::allocator >, std::__1::less, std::__1::allocator > >, std::__1::allocator, std::__1::allocator > > >, mojo::PendingReceiver, mojo::PendingRemote), std::__1::set, std::__1::allocator >, std::__1::less, std::__1::allocator > >, std::__1::allocator, std::__1::allocator > > >&&, mojo::PendingReceiver&&, mojo::PendingRemote&&) + 133
13 QtWebEngineCore 0x00000001155dcd6f base::TaskAnnotator::RunTask(char const*, base::PendingTask*) + 255
14 QtWebEngineCore 0x00000001155f1096 base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::DoWorkImpl(base::sequence_manager::LazyNow*, bool*) + 374
15 QtWebEngineCore 0x00000001155f0e04 base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::DoWork() + 132
16 QtWebEngineCore 0x0000000115668c87 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 103
17 QtWebEngineCore 0x00000001155f162b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
18 QtWebEngineCore 0x00000001155b57cb base::RunLoop::Run() + 395
19 QtWebEngineCore 0x0000000119535f06 content::BrowserProcessSubThread::IOThreadRun(base::RunLoop*) + 102
20 QtWebEngineCore 0x0000000115610a7d base::Thread::ThreadMain() + 413
21 QtWebEngineCore 0x0000000115659e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
22 libsystem_pthread.dylib 0x00007fff203618fc _pthread_start + 224
23 libsystem_pthread.dylib 0x00007fff2035d443 thread_start + 15
Thread 5:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff2032c2ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2032c62c mach_msg + 60
2 QtWebEngineCore 0x000000011565e492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011565e2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001155861db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x00000001155f162b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x00000001155b57cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x0000000115610a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x0000000115659e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff203618fc _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff2035d443 thread_start + 15
Thread 6:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff2032c2ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2032c62c mach_msg + 60
2 QtWebEngineCore 0x000000011565e492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x0000000115606778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x0000000115607150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x0000000115606cd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x0000000115659e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff203618fc _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff2035d443 thread_start + 15
Thread 7:: CompositorTileWorker1
0 libsystem_kernel.dylib 0x00007fff2032ecde __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff20361e49 _pthread_cond_wait + 1298
2 QtWebEngineCore 0x0000000115655e18 base::ConditionVariable::Wait() + 104
3 QtWebEngineCore 0x000000011690d5f8 non-virtual thunk to cc::SingleThreadTaskGraphRunner::Run() + 56
4 QtWebEngineCore 0x0000000115659e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
5 libsystem_pthread.dylib 0x00007fff203618fc _pthread_start + 224
6 libsystem_pthread.dylib 0x00007fff2035d443 thread_start + 15
Thread 8:: Chrome_InProcGpuThread
0 libsystem_kernel.dylib 0x00007fff2032e4ca __psynch_mutexwait + 10
1 libsystem_pthread.dylib 0x00007fff2035f2ab _pthread_mutex_firstfit_lock_wait + 76
2 libsystem_pthread.dylib 0x00007fff2035d192 _pthread_mutex_firstfit_lock_slow + 204
3 QtWebEngineCore 0x0000000115656088 base::internal::LockImpl::Lock() + 72
4 QtWebEngineCore 0x0000000113bca82f mojo::core::Core::CreateMessagePipe(MojoCreateMessagePipeOptions const*, unsigned int*, unsigned int*) + 335
5 QtWebEngineCore 0x0000000114dfac41 viz::GpuServiceImpl::EstablishGpuChannel(int, unsigned long long, bool, bool, base::OnceCallback)>) + 177
6 QtWebEngineCore 0x0000000114e030b0 base::internal::Invoker)>), base::WeakPtr, int, unsigned long long, bool, bool, base::OnceCallback)> >, void ()>::RunOnce(base::internal::BindStateBase*) + 128
7 QtWebEngineCore 0x00000001155dcd6f base::TaskAnnotator::RunTask(char const*, base::PendingTask*) + 255
8 QtWebEngineCore 0x00000001155f1096 base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::DoWorkImpl(base::sequence_manager::LazyNow*, bool*) + 374
9 QtWebEngineCore 0x00000001155f0e04 base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::DoWork() + 132
10 QtWebEngineCore 0x000000011558617f base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 79
11 QtWebEngineCore 0x00000001155f162b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
12 QtWebEngineCore 0x00000001155b57cb base::RunLoop::Run() + 395
13 QtWebEngineCore 0x0000000115610a7d base::Thread::ThreadMain() + 413
14 QtWebEngineCore 0x0000000115659e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
15 libsystem_pthread.dylib 0x00007fff203618fc _pthread_start + 224
16 libsystem_pthread.dylib 0x00007fff2035d443 thread_start + 15
Thread 9:: Chrome_ChildIOThread
0 libsystem_kernel.dylib 0x00007fff203351d2 kevent64 + 10
1 QtWebEngineCore 0x0000000115668e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x0000000115668cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x00000001155f162b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x00000001155b57cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x0000000115610a7d base::Thread::ThreadMain() + 413
6 QtWebEngineCore 0x0000000115659e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff203618fc _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff2035d443 thread_start + 15
Thread 10:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff2032c2ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2032c62c mach_msg + 60
2 QtWebEngineCore 0x000000011565e492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011565e2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001155861db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x00000001155f162b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x00000001155b57cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x0000000115610a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x0000000115659e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff203618fc _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff2035d443 thread_start + 15
Thread 11:: VizCompositorThread
0 libsystem_kernel.dylib 0x00007fff2032c2ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2032c62c mach_msg + 60
2 QtWebEngineCore 0x000000011565e492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011558620f base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 223
4 QtWebEngineCore 0x00000001155f162b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
5 QtWebEngineCore 0x00000001155b57cb base::RunLoop::Run() + 395
6 QtWebEngineCore 0x0000000115610a7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x0000000115659e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff203618fc _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff2035d443 thread_start + 15
Thread 12:: ThreadPoolSingleThreadForegroundBlocking0
0 libsystem_kernel.dylib 0x00007fff2032e4ca __psynch_mutexwait + 10
1 libsystem_pthread.dylib 0x00007fff2035f2ab _pthread_mutex_firstfit_lock_wait + 76
2 libsystem_pthread.dylib 0x00007fff2035d192 _pthread_mutex_firstfit_lock_slow + 204
3 QtWebEngineCore 0x0000000115656088 base::internal::LockImpl::Lock() + 72
4 QtWebEngineCore 0x0000000113bcd691 mojo::core::Core::SendInvitation(unsigned int, MojoPlatformProcessHandle const*, MojoInvitationTransportEndpoint const*, void (*)(unsigned long, MojoProcessErrorDetails const*), unsigned long, MojoSendInvitationOptions const*) + 385
5 QtWebEngineCore 0x0000000113bd23ec MojoSendInvitationImpl + 44
6 QtWebEngineCore 0x0000000115cff52e mojo::(anonymous namespace)::SendInvitation(mojo::ScopedHandleBase, int, mojo::PlatformHandle, unsigned int, unsigned int, base::RepeatingCallback, std::__1::allocator > const&)> const&, base::BasicStringPiece, std::__1::allocator > >) + 270
7 QtWebEngineCore 0x0000000115cff3f6 mojo::OutgoingInvitation::Send(mojo::OutgoingInvitation, int, mojo::PlatformChannelEndpoint, base::RepeatingCallback, std::__1::allocator > const&)> const&) + 102
8 QtWebEngineCore 0x00000001195824d7 content::internal::ChildProcessLauncherHelper::PostLaunchOnLauncherThread(content::internal::ChildProcessLauncherHelper::Process, int) + 439
9 QtWebEngineCore 0x00000001195822d2 content::internal::ChildProcessLauncherHelper::LaunchOnLauncherThread() + 242
10 QtWebEngineCore 0x00000001155dcd6f base::TaskAnnotator::RunTask(char const*, base::PendingTask*) + 255
11 QtWebEngineCore 0x00000001155ff045 base::internal::TaskTracker::RunBlockShutdown(base::internal::Task*) + 37
12 QtWebEngineCore 0x00000001155fead4 base::internal::TaskTracker::RunTask(base::internal::Task, base::internal::TaskSource*, base::TaskTraits const&) + 740
13 QtWebEngineCore 0x00000001156568bd base::internal::TaskTrackerPosix::RunTask(base::internal::Task, base::internal::TaskSource*, base::TaskTraits const&) + 125
14 QtWebEngineCore 0x00000001155fe5a1 base::internal::TaskTracker::RunAndPopNextTask(base::internal::RegisteredTaskSource) + 433
15 QtWebEngineCore 0x0000000115607035 base::internal::WorkerThread::RunWorker() + 741
16 QtWebEngineCore 0x0000000115606d34 base::internal::WorkerThread::RunDedicatedWorker() + 20
17 QtWebEngineCore 0x0000000115659e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
18 libsystem_pthread.dylib 0x00007fff203618fc _pthread_start + 224
19 libsystem_pthread.dylib 0x00007fff2035d443 thread_start + 15
Thread 13:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff2032c2ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2032c62c mach_msg + 60
2 QtWebEngineCore 0x000000011565e492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011565e2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001155861db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x00000001155f162b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x00000001155b57cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x0000000115610a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x0000000115659e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff203618fc _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff2035d443 thread_start + 15
Thread 14:: MemoryInfra
0 libsystem_kernel.dylib 0x00007fff2032c2ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2032c62c mach_msg + 60
2 QtWebEngineCore 0x000000011565e492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011565e2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001155861db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x00000001155f162b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x00000001155b57cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x0000000115610a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x0000000115659e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff203618fc _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff2035d443 thread_start + 15
Thread 15:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff2032c2ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2032c62c mach_msg + 60
2 QtWebEngineCore 0x000000011565e492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011565e2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001155861db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x00000001155f162b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x00000001155b57cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x0000000115610a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x0000000115659e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff203618fc _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff2035d443 thread_start + 15
Thread 16:: com.apple.NSEventThread
0 libsystem_kernel.dylib 0x00007fff2032c2ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2032c62c mach_msg + 60
2 com.apple.CoreFoundation 0x00007fff2045949f __CFRunLoopServiceMachPort + 316
3 com.apple.CoreFoundation 0x00007fff20457b7f __CFRunLoopRun + 1328
4 com.apple.CoreFoundation 0x00007fff20456f8c CFRunLoopRunSpecific + 563
5 com.apple.AppKit 0x00007fff22de623a _NSEventThread + 124
6 libsystem_pthread.dylib 0x00007fff203618fc _pthread_start + 224
7 libsystem_pthread.dylib 0x00007fff2035d443 thread_start + 15
Thread 17:: ThreadPoolSingleThreadSharedBackgroundBlocking1
0 libsystem_kernel.dylib 0x00007fff2032c2ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2032c62c mach_msg + 60
2 QtWebEngineCore 0x000000011565e492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011565e2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000011560676a base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 42
5 QtWebEngineCore 0x0000000115606e3d base::internal::WorkerThread::RunWorker() + 237
6 QtWebEngineCore 0x0000000115606c74 base::internal::WorkerThread::RunBackgroundSharedWorker() + 20
7 QtWebEngineCore 0x0000000115659e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff203618fc _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff2035d443 thread_start + 15
Thread 18:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff2032c2ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2032c62c mach_msg + 60
2 QtWebEngineCore 0x000000011565e492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011565e2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001155861db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x00000001155f162b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x00000001155b57cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x0000000115610a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x0000000115659e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff203618fc _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff2035d443 thread_start + 15
Thread 19:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff2032c2ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2032c62c mach_msg + 60
2 QtWebEngineCore 0x000000011565e492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x0000000115606778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x0000000115607150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x0000000115606cd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x0000000115659e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff203618fc _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff2035d443 thread_start + 15
Thread 20:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff2032c2ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2032c62c mach_msg + 60
2 QtWebEngineCore 0x000000011565e492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x0000000115606778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x0000000115607150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x0000000115606cd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x0000000115659e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff203618fc _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff2035d443 thread_start + 15
Thread 21:
0 libsystem_pthread.dylib 0x00007fff2035d420 start_wqthread + 0
Thread 22:
0 libsystem_pthread.dylib 0x00007fff2035d420 start_wqthread + 0
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x0000000112afbe00 rcx: 0x00007f8faa855a58 rdx: 0x0000000000000000
rdi: 0x0000000000000103 rsi: 0x0000000000000006 rbp: 0x00007f8faa855a80 rsp: 0x00007f8faa855a58
r8: 0x00007f8faa855f48 r9: 0x332c94f177675ec4 r10: 0x0000000112afbe00 r11: 0x0000000000000246
r12: 0x0000000000000103 r13: 0x0000000000000043 r14: 0x0000000000000006 r15: 0x0000000000000016
rip: 0x00007fff2033292e rfl: 0x0000000000000246 cr2: 0x00000001191fb000
Logical CPU: 0
Error Code: 0x02000148
Trap Number: 133
Thread 0 instruction stream not available.
Thread 0 last branch register state not available.
Binary Images:
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0x7fff6e1b5000 - 0x7fff6e29cfff com.apple.audio.AVFAudio (1.0 - 477.88) /System/Library/Frameworks/AVFAudio.framework/Versions/A/AVFAudio
0x7fff6f81e000 - 0x7fff6f830fff com.apple.CMImaging (1.0 - 82.6) /System/Library/PrivateFrameworks/CMImaging.framework/Versions/A/CMImaging
0x7fff73b2e000 - 0x7fff73b39fff com.apple.SymptomAnalytics (1.0 - 1431.140.1) /System/Library/PrivateFrameworks/Symptoms.framework/Frameworks/SymptomAnalytics.framework/Versions/A/SymptomAnalytics
0x7fff73d4f000 - 0x7fff73d67fff com.apple.SymptomPresentationFeed (1.0 - 1431.140.1) /System/Library/PrivateFrameworks/Symptoms.framework/Frameworks/SymptomPresentationFeed.framework/Versions/A/SymptomPresentationFeed
0x7fff778df000 - 0x7fff778e6fff libRosetta.dylib (203.58) /usr/lib/libRosetta.dylib
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=1.2G resident=0K(0%) swapped_out_or_unallocated=1.2G(100%)
Writable regions: Total=1.1G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=1.1G(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 384K 3
Activity Tracing 256K 1
CG backing stores 3240K 6
CG image 248K 15
CoreAnimation 116K 14
CoreGraphics 12K 2
CoreUI image data 3500K 28
Foundation 16K 1
Kernel Alloc Once 8K 1
MALLOC 579.9M 533
MALLOC guard page 32K 8
MALLOC_LARGE (reserved) 384K 1 reserved VM address space (unallocated)
MALLOC_NANO (reserved) 256.0M 1 reserved VM address space (unallocated)
Mach message 32K 4
OpenGL GLSL 384K 5
STACK GUARD 88K 22
Stack 154.2M 23
Stack Guard 56.0M 1
VM_ALLOCATE 90.8M 112
__DATA 30.9M 596
__DATA_CONST 24.1M 270
__DATA_DIRTY 1270K 175
__FONT_DATA 4K 1
__GLSLBUILTINS 5176K 1
__LINKEDIT 594.5M 151
__OBJC_RO 70.3M 1
__OBJC_RW 2496K 2
__TEXT 590.0M 574
__UNICODE 588K 1
mapped file 593.9M 63
shared memory 2960K 24
=========== ======= =======
TOTAL 3.0G 2640
TOTAL, minus reserved VM space 2.7G 2640
===== Log before crash start =====
UCSF ChimeraX version: 1.3 (2021-12-08)
© 2016-2021 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> ui tool show "Molecular Dynamics Viewer"
Please register the custom scheme 'kmd' via
QWebEngineUrlScheme::registerScheme() before installing the custom scheme
handler.
Chain information for structure #1
---
Chain | Description
? | No description available
> hbonds reveal true
73 hydrogen bonds found
> ~hbonds
===== Log before crash end =====
Log:
UCSF ChimeraX version: 1.3 (2021-12-08)
© 2016-2021 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 INTEL-16.5.2
OpenGL renderer: Intel(R) Iris(TM) Plus Graphics 640
OpenGL vendor: Intel Inc.Hardware:
Hardware Overview:
Model Name: MacBook Pro
Model Identifier: MacBookPro14,1
Processor Name: Dual-Core Intel Core i5
Processor Speed: 2.3 GHz
Number of Processors: 1
Total Number of Cores: 2
L2 Cache (per Core): 256 KB
L3 Cache: 4 MB
Hyper-Threading Technology: Enabled
Memory: 16 GB
System Firmware Version: 429.140.8.0.0
SMC Version (system): 2.43f11
Software:
System Software Overview:
System Version: macOS 11.6 (20G165)
Kernel Version: Darwin 20.6.0
Time since boot: 13 days 18:52
Graphics/Displays:
Intel Iris Plus Graphics 640:
Chipset Model: Intel Iris Plus Graphics 640
Type: GPU
Bus: Built-In
VRAM (Dynamic, Max): 1536 MB
Vendor: Intel
Device ID: 0x5926
Revision ID: 0x0006
Metal Family: Supported, Metal GPUFamily macOS 2
Displays:
Color LCD:
Display Type: Built-In Retina LCD
Resolution: 2560 x 1600 Retina
Framebuffer Depth: 24-Bit Color (ARGB8888)
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: Yes
Connection Type: Internal
Locale: (None, 'UTF-8')
PyQt5 5.15.2, Qt 5.15.2
Installed Packages:
alabaster: 0.7.12
appdirs: 1.4.4
appnope: 0.1.2
Babel: 2.9.1
backcall: 0.2.0
blockdiag: 2.0.1
certifi: 2021.5.30
cftime: 1.5.1.1
charset-normalizer: 2.0.9
ChimeraX-AddCharge: 1.2.2
ChimeraX-AddH: 2.1.11
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.2.3
ChimeraX-AlphaFold: 1.0
ChimeraX-AltlocExplorer: 1.0.1
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.31
ChimeraX-AtomicLibrary: 4.2
ChimeraX-AtomSearch: 2.0
ChimeraX-AtomSearchLibrary: 1.0
ChimeraX-AxesPlanes: 2.0
ChimeraX-BasicActions: 1.1
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.0
ChimeraX-BondRot: 2.0
ChimeraX-BugReporter: 1.0
ChimeraX-BuildStructure: 2.6.1
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.1
ChimeraX-ButtonPanel: 1.0
ChimeraX-CageBuilder: 1.0
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.2
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.2.2
ChimeraX-Clipper: 0.17.0
ChimeraX-ColorActions: 1.0
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5
ChimeraX-CommandLine: 1.1.5
ChimeraX-ConnectStructure: 2.0
ChimeraX-Contacts: 1.0
ChimeraX-Core: 1.3
ChimeraX-CoreFormats: 1.1
ChimeraX-coulombic: 1.3.2
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0
ChimeraX-DataFormats: 1.2.2
ChimeraX-Dicom: 1.0
ChimeraX-DistMonitor: 1.1.5
ChimeraX-DistUI: 1.0
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0
ChimeraX-FunctionKey: 1.0
ChimeraX-Geometry: 1.1
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1
ChimeraX-Hbonds: 2.1.2
ChimeraX-Help: 1.2
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ISOLDE: 1.3
ChimeraX-ItemsInspection: 1.0
ChimeraX-Label: 1.1
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.4
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.1
ChimeraX-Map: 1.1
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1
ChimeraX-Markers: 1.0
ChimeraX-Mask: 1.0
ChimeraX-MatchMaker: 2.0.4
ChimeraX-MDcrds: 2.6
ChimeraX-MedicalToolbar: 1.0.1
ChimeraX-Meeting: 1.0
ChimeraX-MLP: 1.1
ChimeraX-mmCIF: 2.4
ChimeraX-MMTF: 2.1
ChimeraX-Modeller: 1.2.6
ChimeraX-ModelPanel: 1.2.1
ChimeraX-ModelSeries: 1.0
ChimeraX-Mol2: 2.0
ChimeraX-Morph: 1.0
ChimeraX-MouseModes: 1.1
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0.2
ChimeraX-OpenCommand: 1.7
ChimeraX-PDB: 2.6.5
ChimeraX-PDBBio: 1.0
ChimeraX-PDBLibrary: 1.0.2
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.0.1
ChimeraX-PubChem: 2.1
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-ResidueFit: 1.0
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0.1
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.4.6
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0
ChimeraX-Shortcuts: 1.1
ChimeraX-ShowAttr: 1.0
ChimeraX-ShowSequences: 1.0
ChimeraX-SideView: 1.0
ChimeraX-Smiles: 2.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.6.1
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-Struts: 1.0
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0
ChimeraX-SwapRes: 2.1
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.1
ChimeraX-ToolshedUtils: 1.2
ChimeraX-Tug: 1.0
ChimeraX-UI: 1.13.7
ChimeraX-uniprot: 2.2
ChimeraX-UnitCell: 1.0
ChimeraX-ViewDockX: 1.0.1
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0
ChimeraX-WebServices: 1.0
ChimeraX-Zone: 1.0
colorama: 0.4.4
cxservices: 1.1
cycler: 0.11.0
Cython: 0.29.24
decorator: 5.1.0
docutils: 0.17.1
filelock: 3.0.12
funcparserlib: 0.3.6
grako: 3.16.5
h5py: 3.6.0
html2text: 2020.1.16
idna: 3.3
ihm: 0.21
imagecodecs: 2021.4.28
imagesize: 1.3.0
ipykernel: 5.5.5
ipython: 7.23.1
ipython-genutils: 0.2.0
jedi: 0.18.0
Jinja2: 3.0.1
jupyter-client: 6.1.12
jupyter-core: 4.9.1
kiwisolver: 1.3.2
lxml: 4.6.3
lz4: 3.1.3
MarkupSafe: 2.0.1
matplotlib: 3.4.3
matplotlib-inline: 0.1.3
MolecularDynamicsViewer: 1.2
msgpack: 1.0.2
netCDF4: 1.5.7
networkx: 2.6.3
numexpr: 2.8.0
numpy: 1.21.2
openvr: 1.16.801
packaging: 21.0
ParmEd: 3.2.0
parso: 0.8.3
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 8.3.2
pip: 21.2.4
pkginfo: 1.7.1
prompt-toolkit: 3.0.23
psutil: 5.8.0
ptyprocess: 0.7.0
pycollada: 0.7.1
pydicom: 2.1.2
Pygments: 2.10.0
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 3.0.6
PyQt5-commercial: 5.15.2
PyQt5-sip: 12.8.1
PyQtWebEngine-commercial: 5.15.2
python-dateutil: 2.8.2
pytz: 2021.3
pyzmq: 22.3.0
qtconsole: 5.1.1
QtPy: 1.11.3
RandomWords: 0.3.0
requests: 2.26.0
scipy: 1.7.1
setuptools: 57.5.0
sfftk-rw: 0.7.1
six: 1.16.0
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
Sphinx: 4.2.0
sphinx-autodoc-typehints: 1.12.0
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 2.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 2.0.0
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.5
suds-jurko: 0.6
tifffile: 2021.4.8
tinyarray: 1.2.3
tornado: 6.1
traitlets: 5.1.1
urllib3: 1.26.7
wcwidth: 0.2.5
webcolors: 1.11.1
wheel: 0.37.0
wheel-filename: 1.3.0
Change History (2)
comment:1 by , 4 years ago
| Cc: | added |
|---|---|
| Component: | Unassigned → Core |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → accepted |
| Summary: | ChimeraX bug report submission → Crash in event loop |
comment:2 by , 4 years ago
| Resolution: | → can't reproduce |
|---|---|
| Status: | accepted → closed |
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