The following bug report has been submitted:
Platform: macOS-10.14.6-x86_64-i386-64bit
ChimeraX Version: 1.3.dev202109140730 (2021-09-14 07:30:30 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Fatal Python error: Segmentation fault
Thread 0x0000700038e32000 (most recent call first):
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py", line 576 in _handle_results
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 910 in run
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 973 in _bootstrap_inner
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py", line 930 in _bootstrap
[other similar threads deleted]
Current thread 0x000000011690c5c0 (most recent call first):
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 2288 in make_item
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 2196 in _layout_line
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 2219 in layout_lines
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1554 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
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File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
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File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
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File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
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File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
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File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
File "/private/var/folders/tf/nskrl3451cngbvgvff3bm5qh0000gn/T/AppTranslocation/850C9EB0-6BE8-43D5-814E-2B12D73E087B/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/seq-view/seq_canvas.py", line 1565 in __init__
...
Process: ChimeraX [54093]
Path: /Volumes/VOLUME/*/ChimeraX_Daily.app/Contents/MacOS/ChimeraX
Identifier: edu.ucsf.cgl.ChimeraX
Version: 1.3.0 (1.3.0.0)
Code Type: X86-64 (Native)
Parent Process: ??? [1]
Responsible: ChimeraX [54093]
User ID: 501
Date/Time: 2021-11-24 15:16:01.821 -0500
OS Version: Mac OS X 10.14.6 (18G9323)
Report Version: 12
Anonymous UUID: 71F90628-DCBC-CA0A-9848-2F0E2F4FA558
Time Awake Since Boot: 3800000 seconds
System Integrity Protection: enabled
Notes: Translocated Process
Crashed Thread: 0 CrBrowserMain Dispatch queue: com.apple.main-thread
Exception Type: EXC_BAD_ACCESS (SIGSEGV)
Exception Codes: KERN_PROTECTION_FAILURE at 0x00007ffedfe03db8
Exception Note: EXC_CORPSE_NOTIFY
VM Regions Near 0x7ffedfe03db8:
MALLOC_SMALL 00007fb990f59000-00007fb991000000 [ 668K] rw-/rwx SM=ZER
--> Stack Guard 00007ffedc604000-00007ffedfe04000 [ 56.0M] ---/rwx SM=NUL
Stack 00007ffedfe04000-00007ffee0604000 [ 8192K] rw-/rwx SM=SHM
Thread 0 Crashed:: CrBrowserMain Dispatch queue: com.apple.main-thread
0 libsystem_kernel.dylib 0x00007fff5d9df2c2 __pthread_kill + 10
1 libsystem_pthread.dylib 0x00007fff5da9abf1 pthread_kill + 284
2 libsystem_c.dylib 0x00007fff5d8fcd8a raise + 26
3 libsystem_platform.dylib 0x00007fff5da8fb5d _sigtramp + 29
4 ??? 000000000000000000 0 + 0
5 QtGui 0x000000011e1825eb QTextEngine::attributes() const + 59
6 QtGui 0x000000011e196f92 QTextLine::layout_helper(int) + 450
7 QtGui 0x000000011e191cff QTextLayout::createLine() + 191
8 QtWidgets 0x000000011dd520a8 setupTextLayout(QTextLayout*) + 56
9 QtWidgets 0x000000011dd51d67 QGraphicsSimpleTextItemPrivate::updateBoundingRect() + 135
10 QtWidgets 0x000000011dd526aa QGraphicsSimpleTextItem::QGraphicsSimpleTextItem(QString const&, QGraphicsItem*) + 666
11 QtWidgets 0x000000011dd6dc0e QGraphicsScene::addSimpleText(QString const&, QFont const&) + 46
12 QtWidgets.abi3.so 0x000000011d686de2 meth_QGraphicsScene_addSimpleText(_object*, _object*, _object*) + 178
13 org.python.python 0x000000010f68402b cfunction_call + 59
14 org.python.python 0x000000010f64517d _PyObject_MakeTpCall + 365
15 org.python.python 0x000000010f71d61c call_function + 876
16 org.python.python 0x000000010f71abe1 _PyEval_EvalFrameDefault + 25521
17 org.python.python 0x000000010f645948 function_code_fastcall + 104
18 org.python.python 0x000000010f71d58c call_function + 732
19 org.python.python 0x000000010f71aa92 _PyEval_EvalFrameDefault + 25186
20 org.python.python 0x000000010f71e283 _PyEval_EvalCode + 2611
21 org.python.python 0x000000010f6458d1 _PyFunction_Vectorcall + 289
22 org.python.python 0x000000010f71d58c call_function + 732
23 org.python.python 0x000000010f71aa92 _PyEval_EvalFrameDefault + 25186
24 org.python.python 0x000000010f645948 function_code_fastcall + 104
25 org.python.python 0x000000010f71d58c call_function + 732
26 org.python.python 0x000000010f71aa92 _PyEval_EvalFrameDefault + 25186
27 org.python.python 0x000000010f645948 function_code_fastcall + 104
28 org.python.python 0x000000010f644fd5 _PyObject_FastCallDictTstate + 293
29 org.python.python 0x000000010f645bb8 _PyObject_Call_Prepend + 152
30 org.python.python 0x000000010f69f325 slot_tp_init + 165
31 org.python.python 0x000000010f69a879 type_call + 345
32 org.python.python 0x000000010f64517d _PyObject_MakeTpCall + 365
33 org.python.python 0x000000010f71d61c call_function + 876
34 org.python.python 0x000000010f71ab4b _PyEval_EvalFrameDefault + 25371
35 org.python.python 0x000000010f645948 function_code_fastcall + 104
36 org.python.python 0x000000010f644fd5 _PyObject_FastCallDictTstate + 293
37 org.python.python 0x000000010f645bb8 _PyObject_Call_Prepend + 152
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40 org.python.python 0x000000010f64517d _PyObject_MakeTpCall + 365
41 org.python.python 0x000000010f71d61c call_function + 876
42 org.python.python 0x000000010f71ab4b _PyEval_EvalFrameDefault + 25371
43 org.python.python 0x000000010f645948 function_code_fastcall + 104
44 org.python.python 0x000000010f644fd5 _PyObject_FastCallDictTstate + 293
45 org.python.python 0x000000010f645bb8 _PyObject_Call_Prepend + 152
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47 org.python.python 0x000000010f69a879 type_call + 345
48 org.python.python 0x000000010f64517d _PyObject_MakeTpCall + 365
49 org.python.python 0x000000010f71d61c call_function + 876
50 org.python.python 0x000000010f71ab4b _PyEval_EvalFrameDefault + 25371
51 org.python.python 0x000000010f645948 function_code_fastcall + 104
52 org.python.python 0x000000010f644fd5 _PyObject_FastCallDictTstate + 293
53 org.python.python 0x000000010f645bb8 _PyObject_Call_Prepend + 152
54 org.python.python 0x000000010f69f325 slot_tp_init + 165
55 org.python.python 0x000000010f69a879 type_call + 345
56 org.python.python 0x000000010f64517d _PyObject_MakeTpCall + 365
57 org.python.python 0x000000010f71d61c call_function + 876
58 org.python.python 0x000000010f71ab4b _PyEval_EvalFrameDefault + 25371
59 org.python.python 0x000000010f645948 function_code_fastcall + 104
60 org.python.python 0x000000010f644fd5 _PyObject_FastCallDictTstate + 293
61 org.python.python 0x000000010f645bb8 _PyObject_Call_Prepend + 152
62 org.python.python 0x000000010f69f325 slot_tp_init + 165
63 org.python.python 0x000000010f69a879 type_call + 345
64 org.python.python 0x000000010f64517d _PyObject_MakeTpCall + 365
65 org.python.python 0x000000010f71d61c call_function + 876
66 org.python.python 0x000000010f71ab4b _PyEval_EvalFrameDefault + 25371
67 org.python.python 0x000000010f645948 function_code_fastcall + 104
68 org.python.python 0x000000010f644fd5 _PyObject_FastCallDictTstate + 293
69 org.python.python 0x000000010f645bb8 _PyObject_Call_Prepend + 152
70 org.python.python 0x000000010f69f325 slot_tp_init + 165
71 org.python.python 0x000000010f69a879 type_call + 345
72 org.python.python 0x000000010f64517d _PyObject_MakeTpCall + 365
73 org.python.python 0x000000010f71d61c call_function + 876
74 org.python.python 0x000000010f71ab4b _PyEval_EvalFrameDefault + 25371
75 org.python.python 0x000000010f645948 function_code_fastcall + 104
76 org.python.python 0x000000010f644fd5 _PyObject_FastCallDictTstate + 293
77 org.python.python 0x000000010f645bb8 _PyObject_Call_Prepend + 152
78 org.python.python 0x000000010f69f325 slot_tp_init + 165
79 org.python.python 0x000000010f69a879 type_call + 345
80 org.python.python 0x000000010f64517d _PyObject_MakeTpCall + 365
81 org.python.python 0x000000010f71d61c call_function + 876
82 org.python.python 0x000000010f71ab4b _PyEval_EvalFrameDefault + 25371
83 org.python.python 0x000000010f645948 function_code_fastcall + 104
84 org.python.python 0x000000010f644fd5 _PyObject_FastCallDictTstate + 293
85 org.python.python 0x000000010f645bb8 _PyObject_Call_Prepend + 152
86 org.python.python 0x000000010f69f325 slot_tp_init + 165
87 org.python.python 0x000000010f69a879 type_call + 345
88 org.python.python 0x000000010f64517d _PyObject_MakeTpCall + 365
89 org.python.python 0x000000010f71d61c call_function + 876
90 org.python.python 0x000000010f71ab4b _PyEval_EvalFrameDefault + 25371
91 org.python.python 0x000000010f645948 function_code_fastcall + 104
92 org.python.python 0x000000010f644fd5 _PyObject_FastCallDictTstate + 293
93 org.python.python 0x000000010f645bb8 _PyObject_Call_Prepend + 152
94 org.python.python 0x000000010f69f325 slot_tp_init + 165
95 org.python.python 0x000000010f69a879 type_call + 345
96 org.python.python 0x000000010f64517d _PyObject_MakeTpCall + 365
97 org.python.python 0x000000010f71d61c call_function + 876
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432 org.python.python 0x000000010f64517d _PyObject_MakeTpCall + 365
433 org.python.python 0x000000010f71d61c call_function + 876
434 org.python.python 0x000000010f71ab4b _PyEval_EvalFrameDefault + 25371
435 org.python.python 0x000000010f645948 function_code_fastcall + 104
436 org.python.python 0x000000010f644fd5 _PyObject_FastCallDictTstate + 293
437 org.python.python 0x000000010f645bb8 _PyObject_Call_Prepend + 152
438 org.python.python 0x000000010f69f325 slot_tp_init + 165
439 org.python.python 0x000000010f69a879 type_call + 345
440 org.python.python 0x000000010f64517d _PyObject_MakeTpCall + 365
441 org.python.python 0x000000010f71d61c call_function + 876
442 org.python.python 0x000000010f71ab4b _PyEval_EvalFrameDefault + 25371
443 org.python.python 0x000000010f645948 function_code_fastcall + 104
444 org.python.python 0x000000010f644fd5 _PyObject_FastCallDictTstate + 293
445 org.python.python 0x000000010f645bb8 _PyObject_Call_Prepend + 152
446 org.python.python 0x000000010f69f325 slot_tp_init + 165
447 org.python.python 0x000000010f69a879 type_call + 345
448 org.python.python 0x000000010f64517d _PyObject_MakeTpCall + 365
449 org.python.python 0x000000010f71d61c call_function + 876
450 org.python.python 0x000000010f71ab4b _PyEval_EvalFrameDefault + 25371
451 org.python.python 0x000000010f645948 function_code_fastcall + 104
452 org.python.python 0x000000010f644fd5 _PyObject_FastCallDictTstate + 293
453 org.python.python 0x000000010f645bb8 _PyObject_Call_Prepend + 152
454 org.python.python 0x000000010f69f325 slot_tp_init + 165
455 org.python.python 0x000000010f69a879 type_call + 345
456 org.python.python 0x000000010f64517d _PyObject_MakeTpCall + 365
457 org.python.python 0x000000010f71d61c call_function + 876
458 org.python.python 0x000000010f71ab4b _PyEval_EvalFrameDefault + 25371
459 org.python.python 0x000000010f645948 function_code_fastcall + 104
460 org.python.python 0x000000010f644fd5 _PyObject_FastCallDictTstate + 293
461 org.python.python 0x000000010f645bb8 _PyObject_Call_Prepend + 152
462 org.python.python 0x000000010f69f325 slot_tp_init + 165
463 org.python.python 0x000000010f69a879 type_call + 345
464 org.python.python 0x000000010f64517d _PyObject_MakeTpCall + 365
465 org.python.python 0x000000010f71d61c call_function + 876
466 org.python.python 0x000000010f71ab4b _PyEval_EvalFrameDefault + 25371
467 org.python.python 0x000000010f645948 function_code_fastcall + 104
468 org.python.python 0x000000010f644fd5 _PyObject_FastCallDictTstate + 293
469 org.python.python 0x000000010f645bb8 _PyObject_Call_Prepend + 152
470 org.python.python 0x000000010f69f325 slot_tp_init + 165
471 org.python.python 0x000000010f69a879 type_call + 345
472 org.python.python 0x000000010f64517d _PyObject_MakeTpCall + 365
473 org.python.python 0x000000010f71d61c call_function + 876
474 org.python.python 0x000000010f71ab4b _PyEval_EvalFrameDefault + 25371
475 org.python.python 0x000000010f645948 function_code_fastcall + 104
476 org.python.python 0x000000010f644fd5 _PyObject_FastCallDictTstate + 293
477 org.python.python 0x000000010f645bb8 _PyObject_Call_Prepend + 152
478 org.python.python 0x000000010f69f325 slot_tp_init + 165
479 org.python.python 0x000000010f69a879 type_call + 345
480 org.python.python 0x000000010f64517d _PyObject_MakeTpCall + 365
481 org.python.python 0x000000010f71d61c call_function + 876
482 org.python.python 0x000000010f71ab4b _PyEval_EvalFrameDefault + 25371
483 org.python.python 0x000000010f645948 function_code_fastcall + 104
484 org.python.python 0x000000010f644fd5 _PyObject_FastCallDictTstate + 293
485 org.python.python 0x000000010f645bb8 _PyObject_Call_Prepend + 152
486 org.python.python 0x000000010f69f325 slot_tp_init + 165
487 org.python.python 0x000000010f69a879 type_call + 345
488 org.python.python 0x000000010f64517d _PyObject_MakeTpCall + 365
489 org.python.python 0x000000010f71d61c call_function + 876
490 org.python.python 0x000000010f71ab4b _PyEval_EvalFrameDefault + 25371
491 org.python.python 0x000000010f645948 function_code_fastcall + 104
492 org.python.python 0x000000010f644fd5 _PyObject_FastCallDictTstate + 293
493 org.python.python 0x000000010f645bb8 _PyObject_Call_Prepend + 152
494 org.python.python 0x000000010f69f325 slot_tp_init + 165
495 org.python.python 0x000000010f69a879 type_call + 345
496 org.python.python 0x000000010f64517d _PyObject_MakeTpCall + 365
497 org.python.python 0x000000010f71d61c call_function + 876
498 org.python.python 0x000000010f71ab4b _PyEval_EvalFrameDefault + 25371
499 org.python.python 0x000000010f645948 function_code_fastcall + 104
500 org.python.python 0x000000010f644fd5 _PyObject_FastCallDictTstate + 293
501 org.python.python 0x000000010f645bb8 _PyObject_Call_Prepend + 152
502 org.python.python 0x000000010f69f325 slot_tp_init + 165
503 org.python.python 0x000000010f69a879 type_call + 345
504 org.python.python 0x000000010f64517d _PyObject_MakeTpCall + 365
505 org.python.python 0x000000010f71d61c call_function + 876
506 org.python.python 0x000000010f71ab4b _PyEval_EvalFrameDefault + 25371
507 org.python.python 0x000000010f645948 function_code_fastcall + 104
508 org.python.python 0x000000010f644fd5 _PyObject_FastCallDictTstate + 293
509 org.python.python 0x000000010f645bb8 _PyObject_Call_Prepend + 152
510 org.python.python 0x000000010f69f325 slot_tp_init + 165
511 org.python.python 0x000000010f69a879 type_call + 345
Thread 1:: ThreadPoolServiceThread
0 libsystem_kernel.dylib 0x00007fff5d9e10a2 kevent64 + 10
1 QtWebEngineCore 0x00000001215f6e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x00000001215f6cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x000000012157f62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x00000001215437cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x000000012158aa94 base::internal::ServiceThread::Run(base::RunLoop*) + 20
6 QtWebEngineCore 0x000000012159ea7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x00000001215e7e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff5da982eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff5da9b249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff5da9740d thread_start + 13
[similar threads deleted]
Thread 56:
0 libsystem_pthread.dylib 0x00007fff5da973f0 start_wqthread + 0
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x000000011690c5c0 rcx: 0x00007fb980157a48 rdx: 0x0000000000000000
rdi: 0x0000000000000307 rsi: 0x000000000000000b rbp: 0x00007fb980157a80 rsp: 0x00007fb980157a48
r8: 0x00007fb980157f48 r9: 0x72364f677453bee5 r10: 0x000000011690c66c r11: 0x0000000000000287
r12: 0x0000000000000307 r13: 0x00007ffedfe09420 r14: 0x000000000000000b r15: 0x000000000000002d
rip: 0x00007fff5d9df2c2 rfl: 0x0000000000000286 cr2: 0x00007fb950754c40
Logical CPU: 0
Error Code: 0x02000148
Trap Number: 133
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0x7fff5c0c0000 - 0x7fff5c845fdf libobjc.A.dylib (756.2) /usr/lib/libobjc.A.dylib
0x7fff5c857000 - 0x7fff5c85bffb libpam.2.dylib (22.200.1) /usr/lib/libpam.2.dylib
0x7fff5c85e000 - 0x7fff5c893fff libpcap.A.dylib (79.250.4) /usr/lib/libpcap.A.dylib
0x7fff5c8e9000 - 0x7fff5c8ecfff libpmenergy.dylib (194.267.1) /usr/lib/libpmenergy.dylib
0x7fff5c8ed000 - 0x7fff5c8effff libpmsample.dylib (194.267.1) /usr/lib/libpmsample.dylib
0x7fff5c9ac000 - 0x7fff5c9c4ffb libresolv.9.dylib (65.200.3) /usr/lib/libresolv.9.dylib
0x7fff5c9c6000 - 0x7fff5ca01ff3 libsandbox.1.dylib (851.270.6) /usr/lib/libsandbox.1.dylib
0x7fff5ca15000 - 0x7fff5ca16ff7 libspindump.dylib (267.3) /usr/lib/libspindump.dylib
0x7fff5ca17000 - 0x7fff5cbf4fff libsqlite3.dylib (274.26) /usr/lib/libsqlite3.dylib
0x7fff5ce0d000 - 0x7fff5ce10ff7 libutil.dylib (51.200.4) /usr/lib/libutil.dylib
0x7fff5ce11000 - 0x7fff5ce1efff libxar.1.dylib (417.1) /usr/lib/libxar.1.dylib
0x7fff5ce23000 - 0x7fff5cf06fff libxml2.2.dylib (32.20) /usr/lib/libxml2.2.dylib
0x7fff5cf07000 - 0x7fff5cf2fff3 libxslt.1.dylib (16.7.3) /usr/lib/libxslt.1.dylib
0x7fff5cf30000 - 0x7fff5cf42ff7 libz.1.dylib (70.200.4) /usr/lib/libz.1.dylib
0x7fff5d726000 - 0x7fff5d72aff3 libcache.dylib (81) /usr/lib/system/libcache.dylib
0x7fff5d72b000 - 0x7fff5d735ff3 libcommonCrypto.dylib (60118.250.2) /usr/lib/system/libcommonCrypto.dylib
0x7fff5d736000 - 0x7fff5d73dff7 libcompiler_rt.dylib (63.4) /usr/lib/system/libcompiler_rt.dylib
0x7fff5d73e000 - 0x7fff5d747ff7 libcopyfile.dylib (146.250.1) /usr/lib/system/libcopyfile.dylib
0x7fff5d748000 - 0x7fff5d7cdfff libcorecrypto.dylib (602.260.3) /usr/lib/system/libcorecrypto.dylib
0x7fff5d854000 - 0x7fff5d88dff7 libdispatch.dylib (1008.270.1) /usr/lib/system/libdispatch.dylib
0x7fff5d88e000 - 0x7fff5d8baff7 libdyld.dylib (655.1.1) /usr/lib/system/libdyld.dylib
0x7fff5d8bb000 - 0x7fff5d8bbffb libkeymgr.dylib (30) /usr/lib/system/libkeymgr.dylib
0x7fff5d8bc000 - 0x7fff5d8c8ff3 libkxld.dylib (4903.278.70) /usr/lib/system/libkxld.dylib
0x7fff5d8c9000 - 0x7fff5d8c9ff7 liblaunch.dylib (1336.261.7) /usr/lib/system/liblaunch.dylib
0x7fff5d8ca000 - 0x7fff5d8cffff libmacho.dylib (927.0.3) /usr/lib/system/libmacho.dylib
0x7fff5d8d0000 - 0x7fff5d8d2ff7 libquarantine.dylib (86.270.1) /usr/lib/system/libquarantine.dylib
0x7fff5d8d3000 - 0x7fff5d8d4ff7 libremovefile.dylib (45.200.2) /usr/lib/system/libremovefile.dylib
0x7fff5d8d5000 - 0x7fff5d8ecff3 libsystem_asl.dylib (356.200.4) /usr/lib/system/libsystem_asl.dylib
0x7fff5d8ed000 - 0x7fff5d8edff7 libsystem_blocks.dylib (73) /usr/lib/system/libsystem_blocks.dylib
0x7fff5d8ee000 - 0x7fff5d975fff libsystem_c.dylib (1272.250.3) /usr/lib/system/libsystem_c.dylib
0x7fff5d976000 - 0x7fff5d979ffb libsystem_configuration.dylib (963.270.4) /usr/lib/system/libsystem_configuration.dylib
0x7fff5d97a000 - 0x7fff5d97dff7 libsystem_coreservices.dylib (66.1) /usr/lib/system/libsystem_coreservices.dylib
0x7fff5d97e000 - 0x7fff5d984fff libsystem_darwin.dylib (1272.250.3) /usr/lib/system/libsystem_darwin.dylib
0x7fff5d985000 - 0x7fff5d98bffb libsystem_dnssd.dylib (878.270.3) /usr/lib/system/libsystem_dnssd.dylib
0x7fff5d98c000 - 0x7fff5d9d7ffb libsystem_info.dylib (517.200.9) /usr/lib/system/libsystem_info.dylib
0x7fff5d9d8000 - 0x7fff5da00ff7 libsystem_kernel.dylib (4903.278.70) /usr/lib/system/libsystem_kernel.dylib
0x7fff5da01000 - 0x7fff5da4cff7 libsystem_m.dylib (3158.200.7) /usr/lib/system/libsystem_m.dylib
0x7fff5da4d000 - 0x7fff5da77fff libsystem_malloc.dylib (166.270.1) /usr/lib/system/libsystem_malloc.dylib
0x7fff5da78000 - 0x7fff5da82ff7 libsystem_networkextension.dylib (767.250.2) /usr/lib/system/libsystem_networkextension.dylib
0x7fff5da83000 - 0x7fff5da8afff libsystem_notify.dylib (172.200.21) /usr/lib/system/libsystem_notify.dylib
0x7fff5da8b000 - 0x7fff5da94fef libsystem_platform.dylib (177.270.1) /usr/lib/system/libsystem_platform.dylib
0x7fff5da95000 - 0x7fff5da9fff7 libsystem_pthread.dylib (330.250.2) /usr/lib/system/libsystem_pthread.dylib
0x7fff5daa0000 - 0x7fff5daa3ff7 libsystem_sandbox.dylib (851.270.6) /usr/lib/system/libsystem_sandbox.dylib
0x7fff5daa4000 - 0x7fff5daa6ff3 libsystem_secinit.dylib (30.260.2) /usr/lib/system/libsystem_secinit.dylib
0x7fff5daa7000 - 0x7fff5daaeff3 libsystem_symptoms.dylib (820.267.2) /usr/lib/system/libsystem_symptoms.dylib
0x7fff5daaf000 - 0x7fff5dac4ff7 libsystem_trace.dylib (906.260.3) /usr/lib/system/libsystem_trace.dylib
0x7fff5dac6000 - 0x7fff5dacbffb libunwind.dylib (35.4) /usr/lib/system/libunwind.dylib
0x7fff5dacc000 - 0x7fff5dafbfff libxpc.dylib (1336.261.7) /usr/lib/system/libxpc.dylib
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 225842
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 186806412
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=825.6M resident=0K(0%) swapped_out_or_unallocated=825.6M(100%)
Writable regions: Total=5.3G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=5.3G(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 768K 5
Activity Tracing 256K 1
CG backing stores 1760K 2
CG image 260K 24
CoreAnimation 432K 15
CoreGraphics 8K 1
CoreImage 40K 4
CoreUI image data 3096K 31
CoreUI image file 316K 4
Foundation 24K 2
Kernel Alloc Once 8K 1
MALLOC 3.7G 199
MALLOC guard page 48K 9
MALLOC_MEDIUM (reserved) 592.0M 8 reserved VM address space (unallocated)
MALLOC_NANO (reserved) 128.0M 1 reserved VM address space (unallocated)
Mach message 32K 4
Memory Tag 242 12K 1
OpenGL GLSL 384K 5
STACK GUARD 224K 56
Stack 682.9M 57
Stack Guard 56.0M 1
VM_ALLOCATE 144.6M 86
__DATA 86.3M 490
__FONT_DATA 4K 1
__GLSLBUILTINS 5176K 1
__LINKEDIT 314.9M 148
__TEXT 510.8M 469
__UNICODE 564K 1
mapped file 344.1M 135
shared memory 2880K 21
=========== ======= =======
TOTAL 6.5G 1783
TOTAL, minus reserved VM space 5.8G 1783
System Profile:
Network Service: Wi-Fi, AirPort, en1
Thunderbolt Bus: iMac, Apple Inc., 28.1
Boot Volume File System Type: apfs
Memory Module: BANK 0/DIMM0, 8 GB, DDR3, 1867 MHz, 0x802C, 0x31364B544631473634485A2D314739503220
Memory Module: BANK 0/DIMM1, 8 GB, DDR3, 1867 MHz, 0x802C, 0x31364B544631473634485A2D314739503220
Memory Module: BANK 1/DIMM0, 8 GB, DDR3, 1867 MHz, 0x802C, 0x31364B544631473634485A2D314739503220
Memory Module: BANK 1/DIMM1, 8 GB, DDR3, 1867 MHz, 0x802C, 0x31364B544631473634485A2D314739503220
USB Device: USB 3.0 Bus
USB Device: Bluetooth USB Host Controller
USB Device: FaceTime HD Camera (Built-in)
USB Device: USB Mouse
USB Device: Magic Keyboard
Serial ATA Device: APPLE SSD SM0128G, 121.33 GB
Serial ATA Device: APPLE HDD ST2000DM001, 2 TB
Model: iMac17,1, BootROM 429.140.8.0.0, 4 processors, Intel Core i7, 4 GHz, 32 GB, SMC 2.34f2
Graphics: kHW_AMDRadeonR9M395Item, AMD Radeon R9 M395, spdisplays_pcie_device, 2 GB
AirPort: spairport_wireless_card_type_airport_extreme (0x14E4, 0x14A), Broadcom BCM43xx 1.0 (7.77.61.3 AirPortDriverBrcmNIC-1305.12)
Bluetooth: Version 6.0.14d13, 3 services, 27 devices, 1 incoming serial ports
===== Log before crash start =====
UCSF ChimeraX version: 1.3.dev202109140730 (2021-09-14)
© 2016-2021 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> ui tool show AlphaFold
Populating font family aliases took 597 ms. Replace uses of missing font
family "Calibri" with one that exists to avoid this cost.
> alphafold search
> MPKNIKQTSSDVASLASHILKNPNASTIAKAFAGSALSQTSTSRQTSSEMESRASKALQSTKYSEETKTLAASVLSQSSKDR
ChimeraX REST job id: job_uysxf5ip
BlastProtein finished.
Parsing BLAST results.
BlastProtein returned no results
> alphafold predict
> MPKNIKQTSSDVASLASHILKNPNASTIAKAFAGSALSQTSTSRQTSSEMESRASKALQSTKYSEETKTLAASVLSQSSKDR
Running AlphaFold prediction
Chain information for best_model.pdb #1
---
Chain | Description
A | No description available
AlphaFold prediction finished
Results in /Users/alphaproteo/Downloads/ChimeraX/AlphaFold/prediction_6
> select #1
1223 atoms, 1227 bonds, 82 residues, 1 model selected
> select /A:1-82
1223 atoms, 1227 bonds, 82 residues, 1 model selected
> select /A:1-82
1223 atoms, 1227 bonds, 82 residues, 1 model selected
> save /Users/alphaproteo/Desktop/bumo.pdb relModel #1
> ui tool show AlphaFold
> alphafold match
> MSGHLLSADRMLSVSRALDQRPESPSLVIATTILQLGLVVVVWLVALIPAALAALTMLAVTLARGAFRRSKIGRAPRR
No AlphaFold model with similar sequence for 1 sequences
Opened 0 AlphaFold model
> alphafold search
> MSGHLLSADRMLSVSRALDQRPESPSLVIATTILQLGLVVVVWLVALIPAALAALTMLAVTLARGAFRRSKIGRAPRR
ChimeraX REST job id: job_pz7go1x8
BlastProtein finished.
Parsing BLAST results.
BlastProtein returned no results
> alphafold predict
> MSGHLLSADRMLSVSRALDQRPESPSLVIATTILQLGLVVVVWLVALIPAALAALTMLAVTLARGAFRRSKIGRAPRR
Running AlphaFold prediction
Chain information for best_model.pdb #2
---
Chain | Description
A | No description available
AlphaFold prediction finished
Results in /Users/alphaproteo/Downloads/ChimeraX/AlphaFold/prediction_7
> hide #1 models
> save /Users/alphaproteo/Desktop/hfiA_prediction.pdb
> ~select #1
Nothing selected
> select #2
1233 atoms, 1240 bonds, 78 residues, 1 model selected
> ~select #2
Nothing selected
> hide #2 models
> select #1
1223 atoms, 1227 bonds, 82 residues, 1 model selected
> close #1
> select #2
1233 atoms, 1240 bonds, 78 residues, 1 model selected
> show #2 models
> save /Users/alphaproteo/Desktop/hfiA_prediction.pdb relModel #2
> open /Users/alphaproteo/Desktop/caulo_sequences/NZ_CP082923.fa
===== Log before crash end =====
Log:
UCSF ChimeraX version: 1.3.dev202109140730 (2021-09-14)
© 2016-2021 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 ATI-2.11.26
OpenGL renderer: AMD Radeon R9 M395 OpenGL Engine
OpenGL vendor: ATI Technologies Inc.Hardware:
Hardware Overview:
Model Name: iMac
Model Identifier: iMac17,1
Processor Name: Intel Core i7
Processor Speed: 4 GHz
Number of Processors: 1
Total Number of Cores: 4
L2 Cache (per Core): 256 KB
L3 Cache: 8 MB
Hyper-Threading Technology: Enabled
Memory: 32 GB
Boot ROM Version: 429.140.8.0.0
SMC Version (system): 2.34f2
Software:
System Software Overview:
System Version: macOS 10.14.6 (18G9323)
Kernel Version: Darwin 18.7.0
Time since boot: 65 days 33 minutes
Graphics/Displays:
AMD Radeon R9 M395:
Chipset Model: AMD Radeon R9 M395
Type: GPU
Bus: PCIe
PCIe Lane Width: x16
VRAM (Total): 2 GB
Vendor: AMD (0x1002)
Device ID: 0x6920
Revision ID: 0x0001
ROM Revision: 113-C905AA-799
VBIOS Version: 113-C905A1-007
EFI Driver Version: 01.00.799
Metal: Supported, feature set macOS GPUFamily2 v1
Displays:
iMac:
Display Type: Built-In Retina LCD
Resolution: 5120 x 2880 Retina
Framebuffer Depth: 30-Bit Color (ARGB2101010)
Main Display: Yes
Mirror: Off
Online: Yes
Rotation: Supported
Automatically Adjust Brightness: No
Locale: (None, 'UTF-8')
PyQt5 5.15.2, Qt 5.15.2
Installed Packages:
alabaster: 0.7.12
appdirs: 1.4.4
appnope: 0.1.2
Babel: 2.9.1
backcall: 0.2.0
blockdiag: 2.0.1
certifi: 2021.5.30
cftime: 1.5.0
chardet: 4.0.0
ChimeraX-AddCharge: 1.1.4
ChimeraX-AddH: 2.1.10
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.2.2
ChimeraX-AlphaFold: 1.0
ChimeraX-AltlocExplorer: 1.0.1
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.29.1
ChimeraX-AtomicLibrary: 4.1.4
ChimeraX-AtomSearch: 2.0
ChimeraX-AtomSearchLibrary: 1.0
ChimeraX-AxesPlanes: 2.0
ChimeraX-BasicActions: 1.1
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.0
ChimeraX-BondRot: 2.0
ChimeraX-BugReporter: 1.0
ChimeraX-BuildStructure: 2.5.3
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.1
ChimeraX-ButtonPanel: 1.0
ChimeraX-CageBuilder: 1.0
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.2
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.1
ChimeraX-ColorActions: 1.0
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.4.1
ChimeraX-CommandLine: 1.1.5
ChimeraX-ConnectStructure: 2.0
ChimeraX-Contacts: 1.0
ChimeraX-Core: 1.3.dev202109140730
ChimeraX-CoreFormats: 1.1
ChimeraX-coulombic: 1.3.1
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0
ChimeraX-DataFormats: 1.2.1
ChimeraX-Dicom: 1.0
ChimeraX-DistMonitor: 1.1.5
ChimeraX-DistUI: 1.0
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0
ChimeraX-FunctionKey: 1.0
ChimeraX-Geometry: 1.1
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1
ChimeraX-Hbonds: 2.1.1
ChimeraX-Help: 1.2
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ItemsInspection: 1.0
ChimeraX-Label: 1.1
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.4
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.1
ChimeraX-Map: 1.1
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1
ChimeraX-Markers: 1.0
ChimeraX-Mask: 1.0
ChimeraX-MatchMaker: 2.0.1
ChimeraX-MDcrds: 2.5
ChimeraX-MedicalToolbar: 1.0.1
ChimeraX-Meeting: 1.0
ChimeraX-MLP: 1.1
ChimeraX-mmCIF: 2.4
ChimeraX-MMTF: 2.1
ChimeraX-Modeller: 1.2
ChimeraX-ModelPanel: 1.1.1
ChimeraX-ModelSeries: 1.0
ChimeraX-Mol2: 2.0
ChimeraX-Morph: 1.0
ChimeraX-MouseModes: 1.1
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0.2
ChimeraX-OpenCommand: 1.7
ChimeraX-PDB: 2.6.2
ChimeraX-PDBBio: 1.0
ChimeraX-PDBLibrary: 1.0.1
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.0.1
ChimeraX-PubChem: 2.1
ChimeraX-ReadPbonds: 1.0
ChimeraX-Registration: 1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-ResidueFit: 1.0
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.4.3
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0
ChimeraX-Shortcuts: 1.1
ChimeraX-ShowAttr: 1.0
ChimeraX-ShowSequences: 1.0
ChimeraX-SideView: 1.0
ChimeraX-Smiles: 2.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.6
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-Struts: 1.0
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0
ChimeraX-SwapRes: 2.1
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.1
ChimeraX-ToolshedUtils: 1.2
ChimeraX-Tug: 1.0
ChimeraX-UI: 1.12.1
ChimeraX-uniprot: 2.2
ChimeraX-UnitCell: 1.0
ChimeraX-ViewDockX: 1.0.1
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0
ChimeraX-WebServices: 1.0
ChimeraX-Zone: 1.0
colorama: 0.4.4
cxservices: 1.1
cycler: 0.10.0
Cython: 0.29.24
decorator: 5.1.0
distlib: 0.3.2
docutils: 0.17.1
filelock: 3.0.12
funcparserlib: 0.3.6
grako: 3.16.5
h5py: 3.4.0
html2text: 2020.1.16
idna: 2.10
ihm: 0.20
imagecodecs: 2021.4.28
imagesize: 1.2.0
ipykernel: 5.5.5
ipython: 7.23.1
ipython-genutils: 0.2.0
jedi: 0.18.0
Jinja2: 3.0.1
jupyter-client: 6.1.12
jupyter-core: 4.7.1
kiwisolver: 1.3.2
lxml: 4.6.3
lz4: 3.1.3
MarkupSafe: 2.0.1
matplotlib: 3.4.3
matplotlib-inline: 0.1.3
msgpack: 1.0.2
netCDF4: 1.5.7
networkx: 2.6.3
numexpr: 2.7.3
numpy: 1.21.2
openvr: 1.16.801
packaging: 21.0
ParmEd: 3.2.0
parso: 0.8.2
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 8.3.2
pip: 21.2.4
pkginfo: 1.7.1
prompt-toolkit: 3.0.20
psutil: 5.8.0
ptyprocess: 0.7.0
pycollada: 0.7.1
pydicom: 2.1.2
Pygments: 2.10.0
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 2.4.7
PyQt5-commercial: 5.15.2
PyQt5-sip: 12.8.1
PyQtWebEngine-commercial: 5.15.2
python-dateutil: 2.8.1
pytz: 2021.1
pyzmq: 22.2.1
qtconsole: 5.1.1
QtPy: 1.11.1
RandomWords: 0.3.0
requests: 2.25.1
scipy: 1.7.1
setuptools: 58.0.4
sfftk-rw: 0.7.1
six: 1.16.0
snowballstemmer: 2.1.0
sortedcontainers: 2.4.0
Sphinx: 4.2.0
sphinx-autodoc-typehints: 1.12.0
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 2.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 2.0.0
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.5
suds-jurko: 0.6
tifffile: 2021.4.8
tinyarray: 1.2.3
tornado: 6.1
traitlets: 5.1.0
urllib3: 1.26.6
wcwidth: 0.2.5
webcolors: 1.11.1
wheel: 0.37.0
wheel-filename: 1.3.0
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Crash was in adding text (likely a single alignment letter) to a large alignment layout. Can't reproduce without the alignment file.
Likely to be fixed as a side effect of using fixed-width text strings instead of single letters, whenever I have time for that.