![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 4 years ago
Closed 4 years ago
#5781 closed defect (can't reproduce)
Qt crash during exit
| Reported by: | Owned by: | pett | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Window Toolkit | Version: | |
| Keywords: | Cc: | Tom Goddard | |
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: macOS-10.15.7-x86_64-i386-64bit
ChimeraX Version: 1.2.5 (2021-05-24 04:13:57 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Process: ChimeraX [13444]
Path: /Applications/ChimeraX-1.2.5.app/Contents/MacOS/ChimeraX
Identifier: ChimeraX
Version: 1.2.5 (1.2.5.0)
Code Type: X86-64 (Native)
Parent Process: ??? [1]
Responsible: ChimeraX [13444]
User ID: 226371223
Date/Time: 2021-12-14 11:06:48.210 -0500
OS Version: Mac OS X 10.15.7 (19H1519)
Report Version: 12
Bridge OS Version: 6.0 (19P548)
Anonymous UUID: BFAF9F65-5B75-4986-A962-29E4B9627366
Sleep/Wake UUID: 9FF124D5-136E-4A4F-A3A1-4BC59A014643
Time Awake Since Boot: 30000 seconds
Time Since Wake: 4400 seconds
System Integrity Protection: enabled
Crashed Thread: 0 CrBrowserMain Dispatch queue: com.apple.main-thread
Exception Type: EXC_BAD_ACCESS (SIGSEGV)
Exception Codes: KERN_INVALID_ADDRESS at 0x00007f81cf295f00
Exception Note: EXC_CORPSE_NOTIFY
VM Regions Near 0x7f81cf295f00:
MALLOC_LARGE 00007f81cf281000-00007f81cf291000 [ 64K] rw-/rwx SM=PRV
-->
MALLOC_LARGE 00007f81cf2a2000-00007f81cf315000 [ 460K] rw-/rwx SM=PRV
Thread 0 Crashed:: CrBrowserMain Dispatch queue: com.apple.main-thread
0 libsystem_kernel.dylib 0x00007fff6bd4b33a __pthread_kill + 10
1 libsystem_pthread.dylib 0x00007fff6be07e60 pthread_kill + 430
2 libsystem_c.dylib 0x00007fff6bc6293e raise + 26
3 libsystem_platform.dylib 0x00007fff6bdfc5fd _sigtramp + 29
4 ??? 000000000000000000 0 + 0
5 QtCore.abi3.so 0x0000000110f4a28c cleanup_on_exit(_object*, _object*) + 12
6 org.python.python 0x0000000103ca87f6 cfunction_vectorcall_NOARGS + 214
7 org.python.python 0x0000000103c6bdad PyVectorcall_Call + 109
8 org.python.python 0x0000000103dd5b91 atexit_callfuncs + 113
9 org.python.python 0x0000000103d7bbcf Py_FinalizeEx + 79
10 org.python.python 0x0000000103d9d67b Py_RunMain + 1659
11 org.python.python 0x0000000103d9dbdf pymain_main + 223
12 org.python.python 0x0000000103d9daeb Py_Main + 43
13 edu.ucsf.cgl.ChimeraX 0x0000000103c41dc8 main + 120
14 libdyld.dylib 0x00007fff6bc03cc9 start + 1
Thread 1:
0 libsystem_kernel.dylib 0x00007fff6bd47882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff6be08425 _pthread_cond_wait + 698
2 libopenblas.0.dylib 0x0000000104d5f27b blas_thread_server + 507
3 libsystem_pthread.dylib 0x00007fff6be08109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff6be03b8b thread_start + 15
Thread 2:
0 libsystem_kernel.dylib 0x00007fff6bd47882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff6be08425 _pthread_cond_wait + 698
2 libopenblas.0.dylib 0x0000000104d5f27b blas_thread_server + 507
3 libsystem_pthread.dylib 0x00007fff6be08109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff6be03b8b thread_start + 15
Thread 3:
0 libsystem_kernel.dylib 0x00007fff6bd47882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff6be08425 _pthread_cond_wait + 698
2 libopenblas.0.dylib 0x0000000104d5f27b blas_thread_server + 507
3 libsystem_pthread.dylib 0x00007fff6be08109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff6be03b8b thread_start + 15
Thread 4:: ThreadPoolServiceThread
0 libsystem_kernel.dylib 0x00007fff6bd4db96 kevent64 + 10
1 QtWebEngineCore 0x0000000117633e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x0000000117633cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x00000001175bc62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x00000001175807cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x00000001175c7a94 base::internal::ServiceThread::Run(base::RunLoop*) + 20
6 QtWebEngineCore 0x00000001175dba7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x0000000117624e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff6be08109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff6be03b8b thread_start + 15
Thread 5:: ThreadPoolBackgroundWorker
0 libsystem_kernel.dylib 0x00007fff6bd44dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6bd45170 mach_msg + 60
2 QtWebEngineCore 0x0000000117629492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001175d1778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x00000001175d2150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x00000001175d1c44 base::internal::WorkerThread::RunBackgroundPooledWorker() + 20
6 QtWebEngineCore 0x0000000117624e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff6be08109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff6be03b8b thread_start + 15
Thread 6:: Chrome_IOThread
0 libsystem_kernel.dylib 0x00007fff6bd4db96 kevent64 + 10
1 QtWebEngineCore 0x0000000117633e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x0000000117633cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x00000001175bc62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x00000001175807cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x000000011b500f06 content::BrowserProcessSubThread::IOThreadRun(base::RunLoop*) + 102
6 QtWebEngineCore 0x00000001175dba7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x0000000117624e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff6be08109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff6be03b8b thread_start + 15
Thread 7:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff6bd44dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6bd45170 mach_msg + 60
2 QtWebEngineCore 0x0000000117629492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001176292cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001175511db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x00000001175bc62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x00000001175807cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x00000001175dba7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x0000000117624e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff6be08109 _pthread_start + 148
10 libsystem_pthread.dylib 0x00007fff6be03b8b thread_start + 15
Thread 8:: CompositorTileWorker1
0 libsystem_kernel.dylib 0x00007fff6bd47882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff6be08425 _pthread_cond_wait + 698
2 QtWebEngineCore 0x0000000117620e18 base::ConditionVariable::Wait() + 104
3 QtWebEngineCore 0x00000001188d85f8 non-virtual thunk to cc::SingleThreadTaskGraphRunner::Run() + 56
4 QtWebEngineCore 0x0000000117624e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
5 libsystem_pthread.dylib 0x00007fff6be08109 _pthread_start + 148
6 libsystem_pthread.dylib 0x00007fff6be03b8b thread_start + 15
Thread 9:: Chrome_InProcGpuThread
0 libsystem_kernel.dylib 0x00007fff6bd44dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6bd45170 mach_msg + 60
2 QtWebEngineCore 0x0000000117629492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011755120f base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 223
4 QtWebEngineCore 0x00000001175bc62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
5 QtWebEngineCore 0x00000001175807cb base::RunLoop::Run() + 395
6 QtWebEngineCore 0x00000001175dba7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x0000000117624e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff6be08109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff6be03b8b thread_start + 15
Thread 10:: Chrome_ChildIOThread
0 libsystem_kernel.dylib 0x00007fff6bd4db96 kevent64 + 10
1 QtWebEngineCore 0x0000000117633e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x0000000117633cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x00000001175bc62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x00000001175807cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x00000001175dba7d base::Thread::ThreadMain() + 413
6 QtWebEngineCore 0x0000000117624e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff6be08109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff6be03b8b thread_start + 15
Thread 11:: VizCompositorThread
0 libsystem_kernel.dylib 0x00007fff6bd44dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6bd45170 mach_msg + 60
2 QtWebEngineCore 0x0000000117629492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001176292cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001175511db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x00000001175bc62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x00000001175807cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x00000001175dba7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x0000000117624e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff6be08109 _pthread_start + 148
10 libsystem_pthread.dylib 0x00007fff6be03b8b thread_start + 15
Thread 12:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff6bd44dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6bd45170 mach_msg + 60
2 QtWebEngineCore 0x0000000117629492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001176292cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001175511db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x00000001175bc62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x00000001175807cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x00000001175dba7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x0000000117624e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff6be08109 _pthread_start + 148
10 libsystem_pthread.dylib 0x00007fff6be03b8b thread_start + 15
Thread 13:: ThreadPoolSingleThreadForegroundBlocking0
0 libsystem_kernel.dylib 0x00007fff6bd44dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6bd45170 mach_msg + 60
2 QtWebEngineCore 0x0000000117629492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001176292cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001175d176a base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 42
5 QtWebEngineCore 0x00000001175d2150 base::internal::WorkerThread::RunWorker() + 1024
6 QtWebEngineCore 0x00000001175d1d34 base::internal::WorkerThread::RunDedicatedWorker() + 20
7 QtWebEngineCore 0x0000000117624e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff6be08109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff6be03b8b thread_start + 15
Thread 14:: MemoryInfra
0 libsystem_kernel.dylib 0x00007fff6bd44dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6bd45170 mach_msg + 60
2 QtWebEngineCore 0x0000000117629492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001176292cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001175511db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x00000001175bc62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x00000001175807cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x00000001175dba7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x0000000117624e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff6be08109 _pthread_start + 148
10 libsystem_pthread.dylib 0x00007fff6be03b8b thread_start + 15
Thread 15:: com.apple.NSEventThread
0 libsystem_kernel.dylib 0x00007fff6bd44dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6bd45170 mach_msg + 60
2 com.apple.CoreFoundation 0x00007fff31a05785 __CFRunLoopServiceMachPort + 247
3 com.apple.CoreFoundation 0x00007fff31a04252 __CFRunLoopRun + 1319
4 com.apple.CoreFoundation 0x00007fff31a036ce CFRunLoopRunSpecific + 462
5 com.apple.AppKit 0x00007fff2ee19ea4 _NSEventThread + 132
6 libsystem_pthread.dylib 0x00007fff6be08109 _pthread_start + 148
7 libsystem_pthread.dylib 0x00007fff6be03b8b thread_start + 15
Thread 16:: ThreadPoolSingleThreadSharedBackgroundBlocking1
0 libsystem_kernel.dylib 0x00007fff6bd44dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6bd45170 mach_msg + 60
2 QtWebEngineCore 0x0000000117629492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001176292cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001175d176a base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 42
5 QtWebEngineCore 0x00000001175d1e3d base::internal::WorkerThread::RunWorker() + 237
6 QtWebEngineCore 0x00000001175d1c74 base::internal::WorkerThread::RunBackgroundSharedWorker() + 20
7 QtWebEngineCore 0x0000000117624e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff6be08109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff6be03b8b thread_start + 15
Thread 17:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff6bd44dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6bd45170 mach_msg + 60
2 QtWebEngineCore 0x0000000117629492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001175d1778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x00000001175d2150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x00000001175d1cd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x0000000117624e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff6be08109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff6be03b8b thread_start + 15
Thread 18:
0 libsystem_pthread.dylib 0x00007fff6be03b68 start_wqthread + 0
Thread 19:
0 libsystem_pthread.dylib 0x00007fff6be03b68 start_wqthread + 0
Thread 20:
0 libsystem_pthread.dylib 0x00007fff6be03b68 start_wqthread + 0
Thread 21:
0 libsystem_pthread.dylib 0x00007fff6be03b68 start_wqthread + 0
Thread 22:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff6bd44dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6bd45170 mach_msg + 60
2 QtWebEngineCore 0x0000000117629492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001175d1778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x00000001175d2150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x00000001175d1cd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x0000000117624e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff6be08109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff6be03b8b thread_start + 15
Thread 23:
0 libsystem_pthread.dylib 0x00007fff6be03b68 start_wqthread + 0
Thread 24:
0 libsystem_pthread.dylib 0x00007fff6be03b68 start_wqthread + 0
Thread 25:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff6bd44dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6bd45170 mach_msg + 60
2 QtWebEngineCore 0x0000000117629492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001175d1778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x00000001175d2150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x00000001175d1cd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x0000000117624e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff6be08109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff6be03b8b thread_start + 15
Thread 26:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff6bd44dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6bd45170 mach_msg + 60
2 QtWebEngineCore 0x0000000117629492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001175d1778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x00000001175d2150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x00000001175d1cd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x0000000117624e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff6be08109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff6be03b8b thread_start + 15
Thread 27:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff6bd44dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6bd45170 mach_msg + 60
2 QtWebEngineCore 0x0000000117629492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001175d1778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x00000001175d1e3d base::internal::WorkerThread::RunWorker() + 237
5 QtWebEngineCore 0x00000001175d1cd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x0000000117624e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff6be08109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff6be03b8b thread_start + 15
Thread 28:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff6bd44dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6bd45170 mach_msg + 60
2 QtWebEngineCore 0x0000000117629492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001175d1778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x00000001175d2150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x00000001175d1cd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x0000000117624e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff6be08109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff6be03b8b thread_start + 15
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x0000000112246dc0 rcx: 0x00007f81c6955418 rdx: 0x0000000000000000
rdi: 0x0000000000000307 rsi: 0x000000000000000b rbp: 0x00007f81c6955440 rsp: 0x00007f81c6955418
r8: 0x00007f81c6955f48 r9: 0x8d10df08e93d8d44 r10: 0x0000000112246dc0 r11: 0x0000000000000246
r12: 0x0000000000000307 r13: 0x00000000000004f0 r14: 0x000000000000000b r15: 0x0000000000000016
rip: 0x00007fff6bd4b33a rfl: 0x0000000000000246 cr2: 0x00007f81c69548c0
Logical CPU: 0
Error Code: 0x02000148
Trap Number: 133
Binary Images:
0x103c41000 - 0x103c41ff3 +edu.ucsf.cgl.ChimeraX (1.2.5 - 1.2.5.0) /Applications/ChimeraX-1.2.5.app/Contents/MacOS/ChimeraX
0x103c4b000 - 0x103e81ff7 +org.python.python (3.8.8, [c] 2001-2019 Python Software Foundation. - 3.8.8) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/Python
0x103fdb000 - 0x103fddff7 +_heapq.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_heapq.cpython-38-darwin.so
0x103fe5000 - 0x103feaff7 +zlib.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/zlib.cpython-38-darwin.so
0x103ff4000 - 0x103ff6ff7 +_bz2.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_bz2.cpython-38-darwin.so
0x103fff000 - 0x104030fff +_lzma.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_lzma.cpython-38-darwin.so
0x10403f000 - 0x104040ff7 +grp.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/grp.cpython-38-darwin.so
0x104048000 - 0x104050fff +math.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/math.cpython-38-darwin.so
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0x7fff6ba09000 - 0x7fff6ba9bfdb libcorecrypto.dylib (866.140.2) /usr/lib/system/libcorecrypto.dylib
0x7fff6bba8000 - 0x7fff6bbe8ff0 libdispatch.dylib (1173.100.2) /usr/lib/system/libdispatch.dylib
0x7fff6bbe9000 - 0x7fff6bc1ffff libdyld.dylib (750.7) /usr/lib/system/libdyld.dylib
0x7fff6bc20000 - 0x7fff6bc20ffb libkeymgr.dylib (30) /usr/lib/system/libkeymgr.dylib
0x7fff6bc21000 - 0x7fff6bc2dff3 libkxld.dylib (6153.141.43) /usr/lib/system/libkxld.dylib
0x7fff6bc2e000 - 0x7fff6bc2eff7 liblaunch.dylib (1738.140.3) /usr/lib/system/liblaunch.dylib
0x7fff6bc2f000 - 0x7fff6bc34ff7 libmacho.dylib (959.0.1) /usr/lib/system/libmacho.dylib
0x7fff6bc35000 - 0x7fff6bc37ff3 libquarantine.dylib (110.40.3) /usr/lib/system/libquarantine.dylib
0x7fff6bc38000 - 0x7fff6bc39ff7 libremovefile.dylib (48) /usr/lib/system/libremovefile.dylib
0x7fff6bc3a000 - 0x7fff6bc51ff3 libsystem_asl.dylib (377.60.2) /usr/lib/system/libsystem_asl.dylib
0x7fff6bc52000 - 0x7fff6bc52ff7 libsystem_blocks.dylib (74) /usr/lib/system/libsystem_blocks.dylib
0x7fff6bc53000 - 0x7fff6bcdafff libsystem_c.dylib (1353.100.4) /usr/lib/system/libsystem_c.dylib
0x7fff6bcdb000 - 0x7fff6bcdeffb libsystem_configuration.dylib (1061.141.2) /usr/lib/system/libsystem_configuration.dylib
0x7fff6bcdf000 - 0x7fff6bce2fff libsystem_coreservices.dylib (114.1) /usr/lib/system/libsystem_coreservices.dylib
0x7fff6bce3000 - 0x7fff6bcebfff libsystem_darwin.dylib (1353.100.4) /usr/lib/system/libsystem_darwin.dylib
0x7fff6bcec000 - 0x7fff6bcf3fff libsystem_dnssd.dylib (1096.100.3) /usr/lib/system/libsystem_dnssd.dylib
0x7fff6bcf4000 - 0x7fff6bcf5ffb libsystem_featureflags.dylib (17) /usr/lib/system/libsystem_featureflags.dylib
0x7fff6bcf6000 - 0x7fff6bd43ff7 libsystem_info.dylib (538) /usr/lib/system/libsystem_info.dylib
0x7fff6bd44000 - 0x7fff6bd70ff7 libsystem_kernel.dylib (6153.141.43) /usr/lib/system/libsystem_kernel.dylib
0x7fff6bd71000 - 0x7fff6bdb8fff libsystem_m.dylib (3178) /usr/lib/system/libsystem_m.dylib
0x7fff6bdb9000 - 0x7fff6bde0fff libsystem_malloc.dylib (283.100.6) /usr/lib/system/libsystem_malloc.dylib
0x7fff6bde1000 - 0x7fff6bdeeffb libsystem_networkextension.dylib (1095.140.2) /usr/lib/system/libsystem_networkextension.dylib
0x7fff6bdef000 - 0x7fff6bdf8ff7 libsystem_notify.dylib (241.100.2) /usr/lib/system/libsystem_notify.dylib
0x7fff6bdf9000 - 0x7fff6be01fef libsystem_platform.dylib (220.100.1) /usr/lib/system/libsystem_platform.dylib
0x7fff6be02000 - 0x7fff6be0cfff libsystem_pthread.dylib (416.100.3) /usr/lib/system/libsystem_pthread.dylib
0x7fff6be0d000 - 0x7fff6be11ff3 libsystem_sandbox.dylib (1217.141.6) /usr/lib/system/libsystem_sandbox.dylib
0x7fff6be12000 - 0x7fff6be14fff libsystem_secinit.dylib (62.100.2) /usr/lib/system/libsystem_secinit.dylib
0x7fff6be15000 - 0x7fff6be1cffb libsystem_symptoms.dylib (1238.120.2) /usr/lib/system/libsystem_symptoms.dylib
0x7fff6be1d000 - 0x7fff6be33ff2 libsystem_trace.dylib (1147.120.1) /usr/lib/system/libsystem_trace.dylib
0x7fff6be35000 - 0x7fff6be3aff7 libunwind.dylib (35.4) /usr/lib/system/libunwind.dylib
0x7fff6be3b000 - 0x7fff6be70ffe libxpc.dylib (1738.140.3) /usr/lib/system/libxpc.dylib
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 1112
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 2534040
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=1.0G resident=0K(0%) swapped_out_or_unallocated=1.0G(100%)
Writable regions: Total=1.0G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=1.0G(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 512K 4
Activity Tracing 256K 1
CG backing stores 992K 2
CG image 360K 22
CoreAnimation 184K 18
CoreGraphics 8K 1
CoreImage 32K 3
CoreUI image data 3168K 25
Foundation 4K 1
Kernel Alloc Once 8K 1
MALLOC 464.2M 688
MALLOC guard page 32K 8
MALLOC_LARGE (reserved) 384K 1 reserved VM address space (unallocated)
MALLOC_NANO (reserved) 256.0M 1 reserved VM address space (unallocated)
Mach message 8K 1
OpenGL GLSL 384K 4
STACK GUARD 112K 28
Stack 157.2M 29
Stack Guard 56.0M 1
VM_ALLOCATE 106.0M 71
VM_ALLOCATE (reserved) 32.0M 1 reserved VM address space (unallocated)
__DATA 53.7M 547
__DATA_CONST 76K 4
__FONT_DATA 4K 1
__GLSLBUILTINS 5176K 1
__LINKEDIT 480.3M 137
__OBJC_RO 32.3M 1
__OBJC_RW 1908K 2
__TEXT 544.0M 513
__UNICODE 564K 1
mapped file 393.8M 80
shared memory 668K 22
=========== ======= =======
TOTAL 2.5G 2220
TOTAL, minus reserved VM space 2.2G 2220
Log:
> preset "overall look" publication
Preset expands to these ChimeraX commands:
set bg white
graphics silhouettes t
> camera ortho
UCSF ChimeraX version: 1.2.5 (2021-05-24)
© 2016-2021 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open /Users/9cq/Documents/Projects/CC1/MODELLER_IDR/CC1A.BL00010001.pdb
Chain information for CC1A.BL00010001.pdb #1
---
Chain | Description
A | No description available
OpenGL version: 4.1 INTEL-14.7.20
OpenGL renderer: Intel(R) Iris(TM) Plus Graphics OpenGL Engine
OpenGL vendor: Intel Inc.Hardware:
Hardware Overview:
Model Name: MacBook Pro
Model Identifier: MacBookPro16,2
Processor Name: Quad-Core Intel Core i7
Processor Speed: 2.3 GHz
Number of Processors: 1
Total Number of Cores: 4
L2 Cache (per Core): 512 KB
L3 Cache: 8 MB
Hyper-Threading Technology: Enabled
Memory: 16 GB
Boot ROM Version: 1715.40.15.0.0 (iBridge: 19.16.10548.0.0,0)
Software:
System Software Overview:
System Version: macOS 10.15.7 (19H1519)
Kernel Version: Darwin 19.6.0
Time since boot: 1 day 25 minutes
Graphics/Displays:
Intel Iris Plus Graphics:
Chipset Model: Intel Iris Plus Graphics
Type: GPU
Bus: Built-In
VRAM (Dynamic, Max): 1536 MB
Vendor: Intel
Device ID: 0x8a53
Revision ID: 0x0007
Metal: Supported, feature set macOS GPUFamily2 v1
Displays:
Color LCD:
Display Type: Built-In Retina LCD
Resolution: 2560 x 1600 Retina
Framebuffer Depth: 30-Bit Color (ARGB2101010)
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: No
Connection Type: Internal
Locale: (None, 'UTF-8')
PyQt5 5.15.2, Qt 5.15.2
Installed Packages:
alabaster: 0.7.12
appdirs: 1.4.4
appnope: 0.1.2
Babel: 2.9.1
backcall: 0.2.0
blockdiag: 2.0.1
certifi: 2020.12.5
cftime: 1.5.0
chardet: 3.0.4
ChimeraX-AddCharge: 1.0.1
ChimeraX-AddH: 2.1.6
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.1
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.13.2
ChimeraX-AtomicLibrary: 3.1.3
ChimeraX-AtomSearch: 2.0
ChimeraX-AtomSearchLibrary: 1.0
ChimeraX-AxesPlanes: 2.0
ChimeraX-BasicActions: 1.1
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 1.1
ChimeraX-BondRot: 2.0
ChimeraX-BugReporter: 1.0
ChimeraX-BuildStructure: 2.5.2
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.1
ChimeraX-ButtonPanel: 1.0
ChimeraX-CageBuilder: 1.0
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.1
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.1
ChimeraX-ColorActions: 1.0
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.2.1
ChimeraX-CommandLine: 1.1.4
ChimeraX-ConnectStructure: 2.0
ChimeraX-Contacts: 1.0
ChimeraX-Core: 1.2.5
ChimeraX-CoreFormats: 1.0
ChimeraX-coulombic: 1.1.1
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0
ChimeraX-DataFormats: 1.1
ChimeraX-Dicom: 1.0
ChimeraX-DistMonitor: 1.1.3
ChimeraX-DistUI: 1.0
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0
ChimeraX-FunctionKey: 1.0
ChimeraX-Geometry: 1.1
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.0
ChimeraX-Hbonds: 2.1
ChimeraX-Help: 1.1
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.0
ChimeraX-ImageFormats: 1.1
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-Label: 1.0
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.2
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.1
ChimeraX-Map: 1.0.2
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.0
ChimeraX-Markers: 1.0
ChimeraX-Mask: 1.0
ChimeraX-MatchMaker: 1.2.1
ChimeraX-MDcrds: 2.2
ChimeraX-MedicalToolbar: 1.0.1
ChimeraX-Meeting: 1.0
ChimeraX-MLP: 1.1
ChimeraX-mmCIF: 2.3
ChimeraX-MMTF: 2.1
ChimeraX-Modeller: 1.0.1
ChimeraX-ModelPanel: 1.0.1
ChimeraX-ModelSeries: 1.0
ChimeraX-Mol2: 2.0
ChimeraX-Morph: 1.0
ChimeraX-MouseModes: 1.1
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0.1
ChimeraX-OpenCommand: 1.5
ChimeraX-PDB: 2.4.1
ChimeraX-PDBBio: 1.0
ChimeraX-PDBLibrary: 1.0.1
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.0.1
ChimeraX-PubChem: 2.0.1
ChimeraX-ReadPbonds: 1.0
ChimeraX-Registration: 1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-ResidueFit: 1.0
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.4
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SeqView: 2.3
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0
ChimeraX-Shortcuts: 1.0
ChimeraX-ShowAttr: 1.0
ChimeraX-ShowSequences: 1.0
ChimeraX-SideView: 1.0
ChimeraX-Smiles: 2.0.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.3.1
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-Struts: 1.0
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0
ChimeraX-SwapRes: 2.1
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.0.1
ChimeraX-ToolshedUtils: 1.2
ChimeraX-Tug: 1.0
ChimeraX-UI: 1.7.6
ChimeraX-uniprot: 2.1
ChimeraX-UnitCell: 1.0
ChimeraX-ViewDockX: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0
ChimeraX-WebServices: 1.0
ChimeraX-Zone: 1.0
colorama: 0.4.3
comtypes: 1.1.7
cxservices: 1.0
cycler: 0.10.0
Cython: 0.29.21
decorator: 5.0.9
distlib: 0.3.1
docutils: 0.16
filelock: 3.0.12
funcparserlib: 0.3.6
grako: 3.16.5
h5py: 2.10.0
html2text: 2020.1.16
idna: 2.10
ihm: 0.17
imagecodecs: 2020.5.30
imagesize: 1.2.0
ipykernel: 5.3.4
ipython: 7.18.1
ipython-genutils: 0.2.0
jedi: 0.17.2
Jinja2: 2.11.2
jupyter-client: 6.1.7
jupyter-core: 4.7.1
kiwisolver: 1.3.1
line-profiler: 2.1.2
lxml: 4.6.2
lz4: 3.1.0
MarkupSafe: 2.0.1
matplotlib: 3.3.2
matplotlib-inline: 0.1.2
msgpack: 1.0.0
netCDF4: 1.5.4
networkx: 2.5
numexpr: 2.7.3
numpy: 1.19.2
numpydoc: 1.1.0
openvr: 1.14.1501
packaging: 20.9
ParmEd: 3.2.0
parso: 0.7.1
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 7.2.0
pip: 21.0.1
pkginfo: 1.5.0.1
prompt-toolkit: 3.0.18
psutil: 5.7.2
ptyprocess: 0.7.0
pycollada: 0.7.1
pydicom: 2.0.0
Pygments: 2.7.1
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 2.4.7
PyQt5-commercial: 5.15.2
PyQt5-sip: 12.8.1
PyQtWebEngine-commercial: 5.15.2
python-dateutil: 2.8.1
pytz: 2021.1
pyzmq: 22.0.3
qtconsole: 4.7.7
QtPy: 1.9.0
RandomWords: 0.3.0
requests: 2.24.0
scipy: 1.5.2
setuptools: 50.3.2
sfftk-rw: 0.6.7.dev1
six: 1.15.0
snowballstemmer: 2.1.0
sortedcontainers: 2.2.2
Sphinx: 3.2.1
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 2.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 2.0.0
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.5
suds-jurko: 0.6
tables: 3.6.1
tifffile: 2020.9.3
tinyarray: 1.2.3
tornado: 6.1
traitlets: 5.0.5
urllib3: 1.25.11
wcwidth: 0.2.5
webcolors: 1.11.1
wheel: 0.36.0
wheel-filename: 1.3.0
Change History (2)
comment:1 by , 4 years ago
| Cc: | added |
|---|---|
| Component: | Unassigned → Window Toolkit |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → accepted |
| Summary: | ChimeraX bug report submission → Qt crash during exit |
comment:2 by , 4 years ago
| Resolution: | → can't reproduce |
|---|---|
| Status: | accepted → closed |
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