Cannot save PDB

[chimerax-bug-report@…]

The following bug report has been submitted:
Platform:        Windows-10-10.0.19041
ChimeraX Version: 1.2.5 (2021-05-24 04:13:57 UTC)
Description
(Describe the actions that caused this problem to occur here)

Log:
UCSF ChimeraX version: 1.2.5 (2021-05-24)  
© 2016-2021 Regents of the University of California. All rights reserved.  

> open "D:\Fabian Hölzgen\Desktop\Proposal\PCBP1\PCBP1_Alphafold.cxs" format
> session

Log from Wed Nov 24 18:33:06 2021UCSF ChimeraX version: 1.2.5 (2021-05-24)  
© 2016-2021 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open

Missing or invalid "fileNames" argument: Expected a file name  

> 1ZTG

Unknown command: 1ZTG  

> open 1ZTG

1ztg title:  
human α polyC binding protein KH1 [more info...]  
  
Chain information for 1ztg #1  
---  
Chain | Description  
A B C D | poly(RC)-binding protein 1  
Y Z | 5'-D(P*CP*CP*CP*TP*CP*CP*CP*T)-3'  
  
1ztg mmCIF Assemblies  
---  
1| author_defined_assembly  
2| author_defined_assembly  
  

> show atoms

> hide atoms

> show cartoons

> hbonds reveal true

256 hydrogen bonds found  

> style stick

Changed 2526 atom styles  

> select /C:73

5 atoms, 4 bonds, 1 residue, 1 model selected  

> select up

143 atoms, 145 bonds, 18 residues, 1 model selected  

> select up

551 atoms, 555 bonds, 72 residues, 1 model selected  

> delete ~ sel

> view orient

> select clear

> color bfactor

551 atoms, 72 residues, atom bfactor range 73.2 to 80.3  

> hbonds reveal true

56 hydrogen bonds found  

> ~hbonds

> color bfactor

551 atoms, 72 residues, atom bfactor range 73.2 to 80.3  

> mlp

Map values for surface "1ztg_C SES surface": minimum -28.06, mean -3.89,
maximum 22.76  
To also show corresponding color key, enter the above mlp command and add key
true  

> coulombic

Using Amber 20 recommended default charges and atom types for standard
residues  
Coulombic values for 1ztg_C SES surface #1.1: minimum, -17.17, mean 0.09,
maximum 10.54  
To also show corresponding color key, enter the above coulombic command and
add key true  

> hide surfaces

> color sel gray

> select

551 atoms, 555 bonds, 72 residues, 1 model selected  

> color sel gray

> set bgColor gray

> select clear

> lighting soft

> select

551 atoms, 555 bonds, 72 residues, 1 model selected  

> color sel lightblue

> select clear

> select

551 atoms, 555 bonds, 72 residues, 1 model selected  

> hide sel atoms

> select clear

> select :293

Nothing selected  

> ui tool show "Show Sequence Viewer"

> sequence chain /C

Alignment identifier is 1/C  

> select :82

8 atoms, 7 bonds, 1 residue, 1 model selected  

> show sel atoms

> select :G

Nothing selected  

> select :Gly,Ser,Leu,Ile

200 atoms, 181 bonds, 30 residues, 1 model selected  

> select :Gly,Ser,Leu

96 atoms, 82 bonds, 17 residues, 1 model selected  

> select :Gly,Val

46 atoms, 37 bonds, 10 residues, 1 model selected  

> select clear

> select /C:26

4 atoms, 3 bonds, 1 residue, 1 model selected  

> select /C:25

7 atoms, 6 bonds, 1 residue, 1 model selected  

> select add /C:26

11 atoms, 9 bonds, 2 residues, 2 models selected  

> color sel blue

> select /C:27

6 atoms, 5 bonds, 1 residue, 1 model selected  

> select add /C:28

14 atoms, 12 bonds, 2 residues, 2 models selected  

> select add /C:26

18 atoms, 15 bonds, 3 residues, 2 models selected  

> color red sel

Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels',
'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword  

> color sel red

> select /C:25

7 atoms, 6 bonds, 1 residue, 1 model selected  

> color sel lightblue

> select clear

> select /C:28

8 atoms, 7 bonds, 1 residue, 1 model selected  

> select add /C:27

14 atoms, 12 bonds, 2 residues, 2 models selected  

> select add /C:26

18 atoms, 15 bonds, 3 residues, 2 models selected  

> show sel atoms

> select clear

> select :L,E,D

Nothing selected  

> select :L,E,D

Nothing selected  

> select :Leu,Glu

112 atoms, 103 bonds, 13 residues, 1 model selected  

> select :Leu,Glu,Gln

112 atoms, 103 bonds, 13 residues, 1 model selected  

> select clear

> select :K

Nothing selected  

> select :lys

54 atoms, 49 bonds, 6 residues, 1 model selected  

> select :leu,Glu, Asp

128 atoms, 118 bonds, 15 residues, 1 model selected  

> select /C:79

8 atoms, 7 bonds, 1 residue, 1 model selected  

> color sel red

> select /C:80

9 atoms, 8 bonds, 1 residue, 1 model selected  

> select /C:81

9 atoms, 8 bonds, 1 residue, 1 model selected  

> select add /C:80

18 atoms, 16 bonds, 2 residues, 2 models selected  

> select add /C:82

26 atoms, 23 bonds, 3 residues, 2 models selected  

> color red sel

Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels',
'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword  

> color sel red

> show sel atoms

> select clear

> show atoms

> hide cartoons

> show cartoons

> hide atoms

> select add /C:28

8 atoms, 7 bonds, 1 residue, 1 model selected  

> select add /C:27

14 atoms, 12 bonds, 2 residues, 2 models selected  

> select add /C:26

18 atoms, 15 bonds, 3 residues, 2 models selected  

> select add /C:79

26 atoms, 22 bonds, 4 residues, 2 models selected  

> select add /C:82

34 atoms, 29 bonds, 5 residues, 2 models selected  

> select add /C:80

43 atoms, 37 bonds, 6 residues, 2 models selected  

> select add /C:81

52 atoms, 45 bonds, 7 residues, 2 models selected  

> show sel atoms

> hbonds sel reveal true

11 hydrogen bonds found  

> open "D:/Fabian Hölzgen/Downloads/AF-Q15365-F1-model_v1.pdb"

AF-Q15365-F1-model_v1.pdb title:  
Alphafold V2.0 prediction for poly(RC)-binding protein 1 (Q15365) [more
info...]  
  
Chain information for AF-Q15365-F1-model_v1.pdb #2  
---  
Chain | Description  
A | poly(RC)-binding protein 1  
  

> select :293

6 atoms, 5 bonds, 1 residue, 1 model selected  

> select :293,350

15 atoms, 13 bonds, 2 residues, 1 model selected  

> color sel brown

> show sel atoms

> select :301,304,346

28 atoms, 25 bonds, 3 residues, 1 model selected  

> color sel yellow

> show sel atoms

> hide #!1 models

> select :84,186

16 atoms, 14 bonds, 2 residues, 1 model selected  

> select :82,186

24 atoms, 21 bonds, 3 residues, 2 models selected  

> show sel & #2 atoms

> color sel brown

> select #2/A:186

8 atoms, 7 bonds, 1 residue, 1 model selected  

> select #2/A:186

8 atoms, 7 bonds, 1 residue, 1 model selected  

> color sel lightblue

> hide sel atoms

> select :168

9 atoms, 8 bonds, 1 residue, 1 model selected  

> color sel brown

> show sel atoms

> select clear

> save "D:/Fabian Hölzgen/Desktop/Proposal/PCBP1/PCBP1_Alphafold.cxs"

——— End of log from Wed Nov 24 18:33:06 2021 ———

opened ChimeraX session  

> open "D:/Fabian Hölzgen/Downloads/AF-Q15365-F1-model_v1.pdb"

AF-Q15365-F1-model_v1.pdb title:  
Alphafold V2.0 prediction for poly(RC)-binding protein 1 (Q15365) [more
info...]  
  
Chain information for AF-Q15365-F1-model_v1.pdb #3  
---  
Chain | Description  
A | poly(RC)-binding protein 1  
  

> open "D:/Fabian Hölzgen/Downloads/AF-Q15365-F1-model_v1.pdb"

AF-Q15365-F1-model_v1.pdb title:  
Alphafold V2.0 prediction for poly(RC)-binding protein 1 (Q15365) [more
info...]  
  
Chain information for AF-Q15365-F1-model_v1.pdb #4  
---  
Chain | Description  
A | poly(RC)-binding protein 1  
  

> select #4

2615 atoms, 2651 bonds, 356 residues, 1 model selected  

> hide #2 models

> open "D:/Fabian Hölzgen/Downloads/AF-Q15365-F1-model_v1.pdb"

AF-Q15365-F1-model_v1.pdb title:  
Alphafold V2.0 prediction for poly(RC)-binding protein 1 (Q15365) [more
info...]  
  
Chain information for AF-Q15365-F1-model_v1.pdb #5  
---  
Chain | Description  
A | poly(RC)-binding protein 1  
  

> hide #3 models

Drag select of 356 residues  

> delete sel

> show #3 models

> hide #3 models

> hide #!4 models

> show #3 models

> hide #3 models

> show #3 models

> hide #3 models

> show #!4 models

> show #3 models

> hide #!4 models

> hide #!5 models

Drag select of 197 residues  

> delete sel

Drag select of 42 residues  

> delete sel

Drag select of 39 residues, 3 pseudobonds  

> delete sel

> show #!4 models

Drag select of 7 residues  

> delete sel

Drag select of 5 residues  

> delete sel

Drag select of 40 residues  

> delete sel

Drag select of 34 residues, 4 pseudobonds  

> delete sel

Drag select of 1 residues, 1 pseudobonds  

> delete sel

Drag select of 11 residues  

> delete sel

> show #!5 models

> hide #!4 models

> hide #!3 models

> show #!4 models

> hide #!4 models

> show #!4 models

> hide #!4 models

Drag select of 7 residues, 1 pseudobonds  

> delete sel

> show #!4 models

> hide #!4 models

Drag select of 88 residues  

> delete sel

Drag select of 7 residues  

> delete sel

Drag select of 1 pseudobonds  

> delete sel

> select clear

Drag select of 1 pseudobonds  

> delete sel

> delete sel

> show #!4 models

> show #!3 models

> ui tool show Matchmaker

> matchmaker #!3-5 to #1

Parameters  
---  
Chain pairing | bb  
Alignment algorithm | Needleman-Wunsch  
Similarity matrix | BLOSUM-62  
SS fraction | 0.3  
Gap open (HH/SS/other) | 18/18/6  
Gap extend | 1  
SS matrix |  |  | H | S | O  
---|---|---|---  
H | 6 | -9 | -6  
S |  | 6 | -6  
O |  |  | 4  
Iteration cutoff | 2  
  
Matchmaker 1ztg, chain C (#1) with AF-Q15365-F1-model_v1.pdb, chain A (#3),
sequence alignment score = 247.8  
Fewer than 3 residues aligned; cannot match 1ztg, chain C with
AF-Q15365-F1-model_v1.pdb, chain A  
Matchmaker 1ztg, chain C (#1) with AF-Q15365-F1-model_v1.pdb, chain A (#4),
sequence alignment score = 331.8  
RMSD between 69 pruned atom pairs is 0.619 angstroms; (across all 72 pairs:
0.879)  
  
Matchmaker 1ztg, chain C (#1) with AF-Q15365-F1-model_v1.pdb, chain A (#5),
sequence alignment score = 247.8  
Fewer than 3 residues aligned; cannot match 1ztg, chain C with
AF-Q15365-F1-model_v1.pdb, chain A  

> matchmaker #!3 to #1

Parameters  
---  
Chain pairing | bb  
Alignment algorithm | Needleman-Wunsch  
Similarity matrix | BLOSUM-62  
SS fraction | 0.3  
Gap open (HH/SS/other) | 18/18/6  
Gap extend | 1  
SS matrix |  |  | H | S | O  
---|---|---|---  
H | 6 | -9 | -6  
S |  | 6 | -6  
O |  |  | 4  
Iteration cutoff | 2  
  
Matchmaker 1ztg, chain C (#1) with AF-Q15365-F1-model_v1.pdb, chain A (#3),
sequence alignment score = 247.8  
Fewer than 3 residues aligned; cannot match 1ztg, chain C with
AF-Q15365-F1-model_v1.pdb, chain A  

> save "D:/Fabian Hölzgen/Desktop/Proposal/PCBP1/PCBP1_Alphafold_V2.cxs"

No model chosen to save relative to  

> save "D:/Fabian Hölzgen/Desktop/Proposal/PCBP1/PCBP1_Alpha1.pdb" models #3
> relModel #1

Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.2.5\bin\lib\site-
packages\chimerax\save_command\dialog.py", line 116, in <lambda>  
lambda *args, ses=session: show_save_file_dialog(ses), tool_tip="Save output
file",  
File "C:\Program Files\ChimeraX 1.2.5\bin\lib\site-
packages\chimerax\save_command\dialog.py", line 127, in show_save_file_dialog  
_dlg.display(session, **kw)  
File "C:\Program Files\ChimeraX 1.2.5\bin\lib\site-
packages\chimerax\save_command\dialog.py", line 51, in display  
run(session, cmd)  
File "C:\Program Files\ChimeraX 1.2.5\bin\lib\site-
packages\chimerax\core\commands\run.py", line 36, in run  
results = command.run(text, log=log, return_json=return_json)  
File "C:\Program Files\ChimeraX 1.2.5\bin\lib\site-
packages\chimerax\core\commands\cli.py", line 2852, in run  
result = ci.function(session, **kw_args)  
File "C:\Program Files\ChimeraX 1.2.5\bin\lib\site-
packages\chimerax\save_command\cmd.py", line 75, in cmd_save  
Command(session, registry=registry).run(provider_cmd_text, log=log)  
File "C:\Program Files\ChimeraX 1.2.5\bin\lib\site-
packages\chimerax\core\commands\cli.py", line 2852, in run  
result = ci.function(session, **kw_args)  
File "C:\Program Files\ChimeraX 1.2.5\bin\lib\site-
packages\chimerax\save_command\cmd.py", line 87, in provider_save  
provider_info.bundle_info.run_provider(session, provider_info.format_name,  
File "C:\Program Files\ChimeraX 1.2.5\bin\lib\site-
packages\chimerax\pdb\\__init__.py", line 73, in save  
pdb.save_pdb(session, path, **kw)  
File "C:\Program Files\ChimeraX 1.2.5\bin\lib\site-
packages\chimerax\pdb\pdb.py", line 193, in save_pdb  
_pdbio.write_pdb_file([m.cpp_pointer for m in models], output, selected_only,  
OSError: Unable to open file 'D:/Fabian
Hölzgen/Desktop/Proposal/PCBP1/PCBP1_Alpha1.pdb' for writing  
  
OSError: Unable to open file 'D:/Fabian
Hölzgen/Desktop/Proposal/PCBP1/PCBP1_Alpha1.pdb' for writing  
  
File "C:\Program Files\ChimeraX 1.2.5\bin\lib\site-
packages\chimerax\pdb\pdb.py", line 193, in save_pdb  
_pdbio.write_pdb_file([m.cpp_pointer for m in models], output, selected_only,  
  
See log for complete Python traceback.  
  




OpenGL version: 3.3.0 - Build 27.20.100.8682
OpenGL renderer: Intel(R) HD Graphics 530
OpenGL vendor: Intel
Manufacturer: To Be Filled By O.E.M.
Model: To Be Filled By O.E.M.
OS: Microsoft Windows 10 Education (Build 19042)
Memory: 16,855,969,792
MaxProcessMemory: 137,438,953,344
CPU: 8 Intel(R) Core(TM) i7-6700 CPU @ 3.40GHz
OSLanguage: de-DE
Locale: ('en_US', 'cp1252')
PyQt5 5.15.2, Qt 5.15.2
Installed Packages:
    alabaster: 0.7.12
    appdirs: 1.4.4
    Babel: 2.9.1
    backcall: 0.2.0
    blockdiag: 2.0.1
    certifi: 2020.12.5
    cftime: 1.5.0
    chardet: 3.0.4
    ChimeraX-AddCharge: 1.0.1
    ChimeraX-AddH: 2.1.6
    ChimeraX-AlignmentAlgorithms: 2.0
    ChimeraX-AlignmentHdrs: 3.2
    ChimeraX-AlignmentMatrices: 2.0
    ChimeraX-Alignments: 2.1
    ChimeraX-AmberInfo: 1.0
    ChimeraX-Arrays: 1.0
    ChimeraX-Atomic: 1.13.2
    ChimeraX-AtomicLibrary: 3.1.3
    ChimeraX-AtomSearch: 2.0
    ChimeraX-AtomSearchLibrary: 1.0
    ChimeraX-AxesPlanes: 2.0
    ChimeraX-BasicActions: 1.1
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 1.1
    ChimeraX-BondRot: 2.0
    ChimeraX-BugReporter: 1.0
    ChimeraX-BuildStructure: 2.5.2
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.1
    ChimeraX-ButtonPanel: 1.0
    ChimeraX-CageBuilder: 1.0
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.1
    ChimeraX-ChemGroup: 2.0
    ChimeraX-Clashes: 2.1
    ChimeraX-ColorActions: 1.0
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-ColorKey: 1.2.1
    ChimeraX-CommandLine: 1.1.4
    ChimeraX-ConnectStructure: 2.0
    ChimeraX-Contacts: 1.0
    ChimeraX-Core: 1.2.5
    ChimeraX-CoreFormats: 1.0
    ChimeraX-coulombic: 1.1.1
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-CrystalContacts: 1.0
    ChimeraX-DataFormats: 1.1
    ChimeraX-Dicom: 1.0
    ChimeraX-DistMonitor: 1.1.3
    ChimeraX-DistUI: 1.0
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ExperimentalCommands: 1.0
    ChimeraX-FileHistory: 1.0
    ChimeraX-FunctionKey: 1.0
    ChimeraX-Geometry: 1.1
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.0
    ChimeraX-Hbonds: 2.1
    ChimeraX-Help: 1.1
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.0
    ChimeraX-ImageFormats: 1.1
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0.1
    ChimeraX-Label: 1.0
    ChimeraX-ListInfo: 1.1.1
    ChimeraX-Log: 1.1.2
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Maestro: 1.8.1
    ChimeraX-Map: 1.0.2
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0
    ChimeraX-MapFilter: 2.0
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.0
    ChimeraX-Markers: 1.0
    ChimeraX-Mask: 1.0
    ChimeraX-MatchMaker: 1.2.1
    ChimeraX-MDcrds: 2.2
    ChimeraX-MedicalToolbar: 1.0.1
    ChimeraX-Meeting: 1.0
    ChimeraX-MLP: 1.1
    ChimeraX-mmCIF: 2.3
    ChimeraX-MMTF: 2.1
    ChimeraX-Modeller: 1.0.1
    ChimeraX-ModelPanel: 1.0.1
    ChimeraX-ModelSeries: 1.0
    ChimeraX-Mol2: 2.0
    ChimeraX-Morph: 1.0
    ChimeraX-MouseModes: 1.1
    ChimeraX-Movie: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nucleotides: 2.0.1
    ChimeraX-OpenCommand: 1.5
    ChimeraX-PDB: 2.4.1
    ChimeraX-PDBBio: 1.0
    ChimeraX-PDBLibrary: 1.0.1
    ChimeraX-PDBMatrices: 1.0
    ChimeraX-PickBlobs: 1.0
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.0.1
    ChimeraX-PubChem: 2.0.1
    ChimeraX-ReadPbonds: 1.0
    ChimeraX-Registration: 1.1
    ChimeraX-RemoteControl: 1.0
    ChimeraX-ResidueFit: 1.0
    ChimeraX-RestServer: 1.1
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 2.0
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.4
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0
    ChimeraX-SeqView: 2.3
    ChimeraX-Shape: 1.0.1
    ChimeraX-Shell: 1.0
    ChimeraX-Shortcuts: 1.0
    ChimeraX-ShowAttr: 1.0
    ChimeraX-ShowSequences: 1.0
    ChimeraX-SideView: 1.0
    ChimeraX-Smiles: 2.0.1
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.3.1
    ChimeraX-STL: 1.0
    ChimeraX-Storm: 1.0
    ChimeraX-Struts: 1.0
    ChimeraX-Surface: 1.0
    ChimeraX-SwapAA: 2.0
    ChimeraX-SwapRes: 2.1
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.0.1
    ChimeraX-ToolshedUtils: 1.2
    ChimeraX-Tug: 1.0
    ChimeraX-UI: 1.7.6
    ChimeraX-uniprot: 2.1
    ChimeraX-UnitCell: 1.0
    ChimeraX-ViewDockX: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0
    ChimeraX-WebServices: 1.0
    ChimeraX-Zone: 1.0
    colorama: 0.4.3
    comtypes: 1.1.7
    cxservices: 1.0
    cycler: 0.10.0
    Cython: 0.29.21
    decorator: 5.0.9
    distlib: 0.3.1
    docutils: 0.16
    filelock: 3.0.12
    funcparserlib: 0.3.6
    grako: 3.16.5
    h5py: 2.10.0
    html2text: 2020.1.16
    idna: 2.10
    ihm: 0.17
    imagecodecs: 2020.5.30
    imagesize: 1.2.0
    ipykernel: 5.3.4
    ipython: 7.18.1
    ipython-genutils: 0.2.0
    jedi: 0.17.2
    Jinja2: 2.11.2
    jupyter-client: 6.1.7
    jupyter-core: 4.7.1
    kiwisolver: 1.3.1
    line-profiler: 2.1.2
    lxml: 4.6.2
    lz4: 3.1.0
    MarkupSafe: 2.0.1
    matplotlib: 3.3.2
    msgpack: 1.0.0
    netCDF4: 1.5.4
    networkx: 2.5
    numexpr: 2.7.3
    numpy: 1.19.2
    numpydoc: 1.1.0
    openvr: 1.14.1501
    packaging: 20.9
    ParmEd: 3.2.0
    parso: 0.7.1
    pickleshare: 0.7.5
    Pillow: 7.2.0
    pip: 21.0.1
    pkginfo: 1.5.0.1
    prompt-toolkit: 3.0.18
    psutil: 5.7.2
    pycollada: 0.7.1
    pydicom: 2.0.0
    Pygments: 2.7.1
    PyOpenGL: 3.1.5
    PyOpenGL-accelerate: 3.1.5
    pyparsing: 2.4.7
    PyQt5-commercial: 5.15.2
    PyQt5-sip: 12.8.1
    PyQtWebEngine-commercial: 5.15.2
    python-dateutil: 2.8.1
    pytz: 2021.1
    pywin32: 228
    pyzmq: 22.0.3
    qtconsole: 4.7.7
    QtPy: 1.9.0
    RandomWords: 0.3.0
    requests: 2.24.0
    scipy: 1.5.2
    setuptools: 50.3.2
    sfftk-rw: 0.6.7.dev1
    six: 1.15.0
    snowballstemmer: 2.1.0
    sortedcontainers: 2.2.2
    Sphinx: 3.2.1
    sphinxcontrib-applehelp: 1.0.2
    sphinxcontrib-blockdiag: 2.0.0
    sphinxcontrib-devhelp: 1.0.2
    sphinxcontrib-htmlhelp: 2.0.0
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