Crash fetching pseudobond group's _graphics_changed attribute

[chimerax-bug-report@…]

The following bug report has been submitted:
Platform:        macOS-10.16-x86_64-i386-64bit
ChimeraX Version: 1.2.5 (2021-05-24 04:13:57 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Fatal Python error: Bus error

Current thread 0x00000001109dc600 (most recent call first):
  File "/private/var/folders/h0/pv_1pk5d3055gbtk6zjvks7h0000gn/T/AppTranslocation/D2A7F734-15E5-4F8D-A484-347239EDC32C/d/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/chimerax/atomic/molc.py", line 93 in get_prop
  File "/private/var/folders/h0/pv_1pk5d3055gbtk6zjvks7h0000gn/T/AppTranslocation/D2A7F734-15E5-4F8D-A484-347239EDC32C/d/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/chimerax/atomic/pbgroup.py", line 182 in _update_graphics_if_needed
  File "/private/var/folders/h0/pv_1pk5d3055gbtk6zjvks7h0000gn/T/AppTranslocation/D2A7F734-15E5-4F8D-A484-347239EDC32C/d/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/chimerax/core/triggerset.py", line 130 in invoke
  File "/private/var/folders/h0/pv_1pk5d3055gbtk6zjvks7h0000gn/T/AppTranslocation/D2A7F734-15E5-4F8D-A484-347239EDC32C/d/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/chimerax/core/triggerset.py", line 213 in _activate
  File "/private/var/folders/h0/pv_1pk5d3055gbtk6zjvks7h0000gn/T/AppTranslocation

{"app_name":"ChimeraX","timestamp":"2021-11-23 10:16:29.00 +0200","app_version":"","slice_uuid":"74b1c996-e1f3-331c-8c86-116411356099","build_version":"","platform":1,"share_with_app_devs":1,"is_first_party":1,"bug_type":"309","os_version":"macOS 12.0.1 (21A559)","incident_id":"69758B8C-5686-437A-8BE5-3D37327AE34D","name":"ChimeraX"}
{
  "uptime" : 140000,
  "procLaunch" : "2021-11-21 09:22:18.8809 +0200",
  "procRole" : "Background",
  "version" : 2,
  "userID" : 501,
  "deployVersion" : 210,
  "modelCode" : "iMac20,2",
  "procStartAbsTime" : 624027597666,
  "coalitionID" : 1193,
  "osVersion" : {
    "train" : "macOS 12.0.1",
    "build" : "21A559",
    "releaseType" : "User"
  },
  "captureTime" : "2021-11-23 10:16:29.6202 +0200",
  "incident" : "69758B8C-5686-437A-8BE5-3D37327AE34D",
  "bug_type" : "309",
  "pid" : 1209,
  "procExitAbsTime" : 147831872310836,
  "cpuType" : "X86-64",
  "procName" : "ChimeraX",
  "procPath" : "\/Volumes\/VOLUME\/*\/ChimeraX-1.2.5.app\/Contents\/MacOS\/ChimeraX",
  "parentProc" : "launchd",
  "parentPid" : 1,
  "coalitionName" : "edu.ucsf.cgl.ChimeraX",
  "crashReporterKey" : "630C4C8D-8B0C-7930-01A3-6DA651C8BCFC",
  "wakeTime" : 2339,
  "bridgeVersion" : {"build":"19P548","train":"6.0"},
  "sleepWakeUUID" : "D958479E-3A63-46A5-A793-5C48666ED6D2",
  "sip" : "enabled",
  "vmRegionInfo" : "0x107402449 is in 0x1072b4000-0x1074eb000;  bytes after start: 1369161  bytes before end: 953270\n      REGION TYPE                    START - END         [ VSIZE] PRT\/MAX SHRMOD  REGION DETAIL\n      mapped file                 1072ab000-1072b4000    [   36K] r--\/rwx SM=COW  ...t_id=8cb83a85\n--->  mapped file                 1072b4000-1074eb000    [ 2268K] r-x\/rwx SM=COW  ...t_id=91eba385\n      mapped file                 1074eb000-107525000    [  232K] rw-\/rwx SM=COW  ...t_id=90883885",
  "isCorpse" : 1,
  "exception" : {"codes":"0x000000000000000a, 0x0000000107402449","rawCodes":[10,4416611401],"type":"EXC_BAD_ACCESS","signal":"SIGBUS","subtype":"KERN_MEMORY_ERROR at 0x0000000107402449"},
  "termination" : {"flags":0,"code":10,"namespace":"SIGNAL","indicator":"Bus error: 10","byProc":"exc handler","byPid":1209},
  "ktriageinfo" : "VM - Object is not alive\n",
  "vmregioninfo" : "0x107402449 is in 0x1072b4000-0x1074eb000;  bytes after start: 1369161  bytes before end: 953270\n      REGION TYPE                    START - END         [ VSIZE] PRT\/MAX SHRMOD  REGION DETAIL\n      mapped file                 1072ab000-1072b4000    [   36K] r--\/rwx SM=COW  ...t_id=8cb83a85\n--->  mapped file                 1072b4000-1074eb000    [ 2268K] r-x\/rwx SM=COW  ...t_id=91eba385\n      mapped file                 1074eb000-107525000    [  232K] rw-\/rwx SM=COW  ...t_id=90883885",
  "extMods" : {"caller":{"thread_create":0,"thread_set_state":0,"task_for_pid":0},"system":{"thread_create":0,"thread_set_state":0,"task_for_pid":0},"targeted":{"thread_create":0,"thread_set_state":0,"task_for_pid":0},"warnings":0},
  "faultingThread" : 0,
  "threads" : [{"triggered":true,"id":16953,"name":"CrBrowserMain","threadState":{"r13":{"value":1},"rax":{"value":1},"rflags":{"value":66054},"cpu":{"value":18},"r14":{"value":140445566171423},"rsi":{"value":140445566171423},"r8":{"value":140445566173000},"cr2":{"value":4416611401},"rdx":{"value":0},"r10":{"value":4573742764,"symbolLocation":172,"symbol":"_main_thread"},"r9":{"value":14314559574489546195},"r15":{"value":7},"rbx":{"value":110},"trap":{"value":14,"description":"(no mapping for user instruction read)"},"err":{"value":20},"r11":{"value":518},"rip":{"value":4416611401,"matchesCrashFrame":1},"rbp":{"value":140445566171360},"rsp":{"value":140445566171312},"r12":{"value":1},"rcx":{"value":140703264917622},"flavor":"x86_THREAD_STATE","rdi":{"value":7}},"frames":[{"imageOffset":4416611401,"imageIndex":0},{"imageOffset":4416570275,"imageIndex":0},{"imageOffset":4416570615,"imageIndex":0},{"imageOffset":4416571363,"imageIndex":0},{"imageOffset":4416968376,"imageIndex":0},{"imageOffset":140703265242669,"imageIndex":0},{"imageOffset":0,"imageIndex":0},{"imageOffset":140701938116640,"imageIndex":0}]},{"id":17308,"frames":[{"imageOffset":140703264916742,"imageIndex":0},{"imageOffset":4501541499,"imageIndex":0},{"imageOffset":140703265154324,"imageIndex":0},{"imageOffset":140703265136687,"imageIndex":0}]},{"id":17309,"frames":[{"imageOffset":140703264916742,"imageIndex":0},{"imageOffset":4501541499,"imageIndex":0},{"imageOffset":140703265154324,"imageIndex":0},{"imageOffset":140703265136687,"imageIndex":0}]},{"id":17310,"frames":[{"imageOffset":140703264916742,"imageIndex":0},{"imageOffset":4501541499,"imageIndex":0},{"imageOffset":140703265154324,"imageIndex":0},{"imageOffset":140703265136687,"imageIndex":0}]},{"id":17311,"frames":[{"imageOffset":140703264916742,"imageIndex":0},{"imageOffset":4501541499,"imageIndex":0},{"imageOffset":140703265154324,"imageIndex":0},{"imageOffset":140703265136687,"imageIndex":0}]},{"id":17312,"frames":[{"imageOffset":140703264916742,"imageIndex":0},{"imageOffset":4501541499,"imageIndex":0},{"imageOffset":140703265154324,"imageIndex":0},{"imageOffset":140703265136687,"imageIndex":0}]},{"id":17313,"frames":[{"imageOffset":140703264916742,"imageIndex":0},{"imageOffset":4501541499,"imageIndex":0},{"imageOffset":140703265154324,"imageIndex":0},{"imageOffset":140703265136687,"imageIndex":0}]},{"id":17314,"frames":[{"imageOffset":140703264916742,"imageIndex":0},{"imageOffset":4501541499,"imageIndex":0},{"imageOffset":140703265154324,"imageIndex":0},{"imageOffset":140703265136687,"imageIndex":0}]},{"id":17315,"frames":[{"imageOffset":140703264916742,"imageIndex":0},{"imageOffset":4501541499,"imageIndex":0},{"imageOffset":140703265154324,"imageIndex":0},{"imageOffset":140703265136687,"imageIndex":0}]},{"id":17316,"frames":[{"imageOffset":140703264916742,"imageIndex":0},{"imageOffset":4501541499,"imageIndex":0},{"imageOffset":140703265154324,"imageIndex":0},{"imageOffset":140703265136687,"imageIndex":0}]},{"id":17364,"name":"ThreadPoolServiceThread","frames":[{"imageOffset":140703264942534,"imageIndex":0},{"imageOffset":5161151687,"imageIndex":0},{"imageOffset":5160662571,"imageIndex":0},{"imageOffset":5160417227,"imageIndex":0},{"imageOffset":5160708756,"imageIndex":0},{"imageOffset":5160790653,"imageIndex":0},{"imageOffset":5161090567,"imageIndex":0},{"imageOffset":140703265154324,"imageIndex":0},{"imageOffset":140703265136687,"imageIndex":0}]},{"id":17366,"name":"ThreadPoolBackgroundWorker","frames":[{"imageOffset":140703264905914,"imageIndex":0},{"imageOffset":140703264906795,"imageIndex":0},{"imageOffset":5161108626,"imageIndex":0},{"imageOffset":5160748920,"imageIndex":0},{"imageOffset":5160751440,"imageIndex":0},{"imageOffset":5160750148,"imageIndex":0},{"imageOffset":5161090567,"imageIndex":0},{"imageOffset":140703265154324,"imageIndex":0},{"imageOffset":140703265136687,"imageIndex":0}]},{"id":17367,"name":"Chrome_IOThread","frames":[{"imageOffset":140703264942534,"imageIndex":0},{"imageOffset":5161151687,"imageIndex":0},{"imageOffset":5160662571,"imageIndex":0},{"imageOffset":5160417227,"imageIndex":0},{"imageOffset":5227003654,"imageIndex":0},{"imageOffset":5160790653,"imageIndex":0},{"imageOffset":5161090567,"imageIndex":0},{"imageOffset":140703265154324,"imageIndex":0},{"imageOffset":140703265136687,"imageIndex":0}]},{"id":17368,"name":"NetworkConfigWatcher","frames":[{"imageOffset":140703264905914,"imageIndex":0},{"imageOffset":140703264906795,"imageIndex":0},{"imageOffset":5161108626,"imageIndex":0},{"imageOffset":5161108175,"imageIndex":0},{"imageOffset":5160223195,"imageIndex":0},{"imageOffset":5160662571,"imageIndex":0},{"imageOffset":5160417227,"imageIndex":0},{"imageOffset":5160790653,"imageIndex":0},{"imageOffset":5161090567,"imageIndex":0},{"imageOffset":140703265154324,"imageIndex":0},{"imageOffset":140703265136687,"imageIndex":0}]},{"id":17373,"name":"CompositorTileWorker1","frames":[{"imageOffset":140703264916742,"imageIndex":0},{"imageOffset":5161074200,"imageIndex":0},{"imageOffset":5180700152,"imageIndex":0},{"imageOffset":5161090567,"imageIndex":0},{"imageOffset":140703265154324,"imageIndex":0},{"imageOffset":140703265136687,"imageIndex":0}]},{"id":17374,"name":"Chrome_InProcGpuThread","frames":[{"imageOffset":140703264905914,"imageIndex":0},{"imageOffset":140703264906795,"imageIndex":0},{"imageOffset":5161108626,"imageIndex":0},{"imageOffset":5160223247,"imageIndex":0},{"imageOffset":5160662571,"imageIndex":0},{"imageOffset":5160417227,"imageIndex":0},{"image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  "usedImages" : [
  {
    "size" : 0,
    "source" : "A",
    "base" : 0,
    "uuid" : "00000000-0000-0000-0000-000000000000"
  }
],
  "sharedCache" : {
  "base" : 140703261900800,
  "size" : 15213641728,
  "uuid" : "3d05845f-3f65-358f-9ebf-2236e772ac01"
},
  "vmSummary" : "ReadOnly portion of Libraries: Total=616K resident=0K(0%) swapped_out_or_unallocated=616K(100%)\nWritable regions: Total=4.0G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=4.0G(100%)\n\n                                VIRTUAL   REGION \nREGION TYPE                        SIZE    COUNT (non-coalesced) \n===========                     =======  ======= \nAccelerate framework               640K        5 \nActivity Tracing                   256K        1 \nCG backing stores                 3840K        4 \nCG image                           800K       53 \nColorSync                          236K       27 \nCoreAnimation                     8784K       95 \nCoreGraphics                        12K        2 \nCoreUI image data                 5068K       42 \nFoundation                          16K        1 \nIOAccelerator                    283.5M       87 \nIOKit                              340K       85 \nKernel Alloc Once                    8K        1 \nMALLOC                             1.1G      334 \nMALLOC guard page                   48K       11 \nMALLOC_MEDIUM (reserved)           1.8G       18         reserved VM address space (unallocated)\nMALLOC_NANO (reserved)           384.0M        1         reserved VM address space (unallocated)\nMach message                        24K        3 \nOpenGL GLSL                        384K        4 \nSTACK GUARD                        108K       27 \nStack                            134.2M       28 \nStack Guard                       56.0M        1 \nVM_ALLOCATE                      102.8M      170 \nVM_ALLOCATE (reserved)           224.0M        3         reserved VM address space (unallocated)\n__DATA                              16K        1 \n__DATA_CONST                        48K        1 \n__LINKEDIT                         208K        2 \n__TEXT                             432K        1 \ndyld private memory               1024K        1 \nmapped file                      853.4M      476 \nshared memory                     11.3M       74 \n===========                     =======  ======= \nTOTAL                              4.9G     1559 \nTOTAL, minus reserved VM space     2.5G     1559 \n",
  "legacyInfo" : {
  "threadTriggered" : {
    "name" : "CrBrowserMain"
  }
},
  "trialInfo" : {
  "rollouts" : [
    {
      "rolloutId" : "607844aa04477260f58a8077",
      "factorPackIds" : {
        "SIRI_MORPHUN_ASSETS" : "6103050cbfe6dc472e1c982a"
      },
      "deploymentId" : 240000066
    },
    {
      "rolloutId" : "60da5e84ab0ca017dace9abf",
      "factorPackIds" : {

      },
      "deploymentId" : 240000008
    },
    {
      "rolloutId" : "5ffde50ce2aacd000d47a95f",
      "factorPackIds" : {

      },
      "deploymentId" : 240000076
    },
    {
      "rolloutId" : "5fc94383418129005b4e9ae0",
      "factorPackIds" : {

      },
      "deploymentId" : 240000162
    },
    {
      "rolloutId" : "601d9415f79519000ccd4b69",
      "factorPackIds" : {
        "SIRI_TEXT_TO_SPEECH" : "6194416dea7ed64a7812a429"
      },
      "deploymentId" : 240000322
    },
    {
      "rolloutId" : "602ad4dac86151000cf27e46",
      "factorPackIds" : {
        "SIRI_DICTATION_ASSETS" : "614a34c5eae97a2111628dc5"
      },
      "deploymentId" : 240000271
    }
  ],
  "experiments" : [

  ]
}
}


Log:
UCSF ChimeraX version: 1.2.5 (2021-05-24)  
© 2016-2021 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  




OpenGL version: 4.1 ATI-4.7.29
OpenGL renderer: AMD Radeon Pro 5700 XT OpenGL Engine
OpenGL vendor: ATI Technologies Inc.Hardware:

    Hardware Overview:

      Model Name: iMac
      Model Identifier: iMac20,2
      Processor Name: 10-Core Intel Core i9
      Processor Speed: 3.6 GHz
      Number of Processors: 1
      Total Number of Cores: 10
      L2 Cache (per Core): 256 KB
      L3 Cache: 20 MB
      Hyper-Threading Technology: Enabled
      Memory: 32 GB
      System Firmware Version: 1715.40.15.0.0 (iBridge: 19.16.10548.0.0,0)
      OS Loader Version: 540.40.4~45

Software:

    System Software Overview:

      System Version: macOS 12.0.1 (21A559)
      Kernel Version: Darwin 21.1.0
      Time since boot: 2 days 1:06

Graphics/Displays:

    AMD Radeon Pro 5700 XT:

      Chipset Model: AMD Radeon Pro 5700 XT
      Type: GPU
      Bus: PCIe
      PCIe Lane Width: x16
      VRAM (Total): 16 GB
      Vendor: AMD (0x1002)
      Device ID: 0x7319
      Revision ID: 0x0040
      ROM Revision: 113-D1820Q-231
      VBIOS Version: 113-D182A2XT-013
      Option ROM Version: 113-D182A2XT-013
      EFI Driver Version: 01.01.231
      Metal Family: Supported, Metal GPUFamily macOS 2
      Displays:
        iMac:
          Display Type: Built-In Retina LCD
          Resolution: Retina 5K (5120 x 2880)
          Framebuffer Depth: 30-Bit Color (ARGB2101010)
          Main Display: Yes
          Mirror: Off
          Online: Yes
          Automatically Adjust Brightness: Yes
          Connection Type: Internal

Locale: (None, 'UTF-8')
PyQt5 5.15.2, Qt 5.15.2
Installed Packages:
    alabaster: 0.7.12
    appdirs: 1.4.4
    appnope: 0.1.2
    Babel: 2.9.1
    backcall: 0.2.0
    blockdiag: 2.0.1
    certifi: 2020.12.5
    cftime: 1.5.0
    chardet: 3.0.4
    ChimeraX-AddCharge: 1.0.1
    ChimeraX-AddH: 2.1.6
    ChimeraX-AlignmentAlgorithms: 2.0
    ChimeraX-AlignmentHdrs: 3.2
    ChimeraX-AlignmentMatrices: 2.0
    ChimeraX-Alignments: 2.1
    ChimeraX-AmberInfo: 1.0
    ChimeraX-Arrays: 1.0
    ChimeraX-Atomic: 1.13.2
    ChimeraX-AtomicLibrary: 3.1.3
    ChimeraX-AtomSearch: 2.0
    ChimeraX-AtomSearchLibrary: 1.0
    ChimeraX-AxesPlanes: 2.0
    ChimeraX-BasicActions: 1.1
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 1.1
    ChimeraX-BondRot: 2.0
    ChimeraX-BugReporter: 1.0
    ChimeraX-BuildStructure: 2.5.2
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.1
    ChimeraX-ButtonPanel: 1.0
    ChimeraX-CageBuilder: 1.0
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.1
    ChimeraX-ChemGroup: 2.0
    ChimeraX-Clashes: 2.1
    ChimeraX-ColorActions: 1.0
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-ColorKey: 1.2.1
    ChimeraX-CommandLine: 1.1.4
    ChimeraX-ConnectStructure: 2.0
    ChimeraX-Contacts: 1.0
    ChimeraX-Core: 1.2.5
    ChimeraX-CoreFormats: 1.0
    ChimeraX-coulombic: 1.1.1
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-CrystalContacts: 1.0
    ChimeraX-DataFormats: 1.1
    ChimeraX-Dicom: 1.0
    ChimeraX-DistMonitor: 1.1.3
    ChimeraX-DistUI: 1.0
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ExperimentalCommands: 1.0
    ChimeraX-FileHistory: 1.0
    ChimeraX-FunctionKey: 1.0
    ChimeraX-Geometry: 1.1
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.0
    ChimeraX-Hbonds: 2.1
    ChimeraX-Help: 1.1
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.0
    ChimeraX-ImageFormats: 1.1
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0.1
    ChimeraX-Label: 1.0
    ChimeraX-ListInfo: 1.1.1
    ChimeraX-Log: 1.1.2
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Maestro: 1.8.1
    ChimeraX-Map: 1.0.2
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0
    ChimeraX-MapFilter: 2.0
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.0
    ChimeraX-Markers: 1.0
    ChimeraX-Mask: 1.0
    ChimeraX-MatchMaker: 1.2.1
    ChimeraX-MDcrds: 2.2
    ChimeraX-MedicalToolbar: 1.0.1
    ChimeraX-Meeting: 1.0
    ChimeraX-MLP: 1.1
    ChimeraX-mmCIF: 2.3
    ChimeraX-MMTF: 2.1
    ChimeraX-Modeller: 1.0.1
    ChimeraX-ModelPanel: 1.0.1
    ChimeraX-ModelSeries: 1.0
    ChimeraX-Mol2: 2.0
    ChimeraX-Morph: 1.0
    ChimeraX-MouseModes: 1.1
    ChimeraX-Movie: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nucleotides: 2.0.1
    ChimeraX-OpenCommand: 1.5
    ChimeraX-PDB: 2.4.1
    ChimeraX-PDBBio: 1.0
    ChimeraX-PDBLibrary: 1.0.1
    ChimeraX-PDBMatrices: 1.0
    ChimeraX-PickBlobs: 1.0
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.0.1
    ChimeraX-PubChem: 2.0.1
    ChimeraX-ReadPbonds: 1.0
    ChimeraX-Registration: 1.1
    ChimeraX-RemoteControl: 1.0
    ChimeraX-ResidueFit: 1.0
    ChimeraX-RestServer: 1.1
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 2.0
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.4
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0
    ChimeraX-SeqView: 2.3
    ChimeraX-Shape: 1.0.1
    ChimeraX-Shell: 1.0
    ChimeraX-Shortcuts: 1.0
    ChimeraX-ShowAttr: 1.0
    ChimeraX-ShowSequences: 1.0
    ChimeraX-SideView: 1.0
    ChimeraX-Smiles: 2.0.1
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.3.1
    ChimeraX-STL: 1.0
    ChimeraX-Storm: 1.0
    ChimeraX-Struts: 1.0
    ChimeraX-Surface: 1.0
    ChimeraX-SwapAA: 2.0
    ChimeraX-SwapRes: 2.1
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.0.1
    ChimeraX-ToolshedUtils: 1.2
    ChimeraX-Tug: 1.0
    ChimeraX-UI: 1.7.6
    ChimeraX-uniprot: 2.1
    ChimeraX-UnitCell: 1.0
    ChimeraX-ViewDockX: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0
    ChimeraX-WebServices: 1.0
    ChimeraX-Zone: 1.0
    colorama: 0.4.3
    comtypes: 1.1.7
    cxservices: 1.0
    cycler: 0.10.0
    Cython: 0.29.21
    decorator: 5.0.9
    distlib: 0.3.1
    docutils: 0.16
    filelock: 3.0.12
    funcparserlib: 0.3.6
    grako: 3.16.5
    h5py: 2.10.0
    html2text: 2020.1.16
    idna: 2.10
    ihm: 0.17
    imagecodecs: 2020.5.30
    imagesize: 1.2.0
    ipykernel: 5.3.4
    ipython: 7.18.1
    ipython-genutils: 0.2.0
    jedi: 0.17.2
    Jinja2: 2.11.2
    jupyter-client: 6.1.7
    jupyter-core: 4.7.1
    kiwisolver: 1.3.1
    line-profiler: 2.1.2
    lxml: 4.6.2
    lz4: 3.1.0
    MarkupSafe: 2.0.1
    matplotlib: 3.3.2
    matplotlib-inline: 0.1.2
    msgpack: 1.0.0
    netCDF4: 1.5.4
    networkx: 2.5
    numexpr: 2.7.3
    numpy: 1.19.2
    numpydoc: 1.1.0
    openvr: 1.14.1501
    packaging: 20.9
    ParmEd: 3.2.0
    parso: 0.7.1
    pexpect: 4.8.0
    pickleshare: 0.7.5
    Pillow: 7.2.0
    pip: 21.0.1
    pkginfo: 1.5.0.1
    prompt-toolkit: 3.0.18
    psutil: 5.7.2
    ptyprocess: 0.7.0
    pycollada: 0.7.1
    pydicom: 2.0.0
    Pygments: 2.7.1
    PyOpenGL: 3.1.5
    PyOpenGL-accelerate: 3.1.5
    pyparsing: 2.4.7
    PyQt5-commercial: 5.15.2
    PyQt5-sip: 12.8.1
    PyQtWebEngine-commercial: 5.15.2
    python-dateutil: 2.8.1
    pytz: 2021.1
    pyzmq: 22.0.3
    qtconsole: 4.7.7
    QtPy: 1.9.0
    RandomWords: 0.3.0
    requests: 2.24.0
    scipy: 1.5.2
    setuptools: 50.3.2
    sfftk-rw: 0.6.7.dev1
    six: 1.15.0
    snowballstemmer: 2.1.0
    sortedcontainers: 2.2.2
    Sphinx: 3.2.1
    sphinxcontrib-applehelp: 1.0.2
    sphinxcontrib-blockdiag: 2.0.0
    sphinxcontrib-devhelp: 1.0.2
    sphinxcontrib-htmlhelp: 2.0.0
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 1.0.3
    sphinxcontrib-serializinghtml: 1.1.5
    suds-jurko: 0.6
    tables: 3.6.1
    tifffile: 2020.9.3
    tinyarray: 1.2.3
    tornado: 6.1
    traitlets: 5.0.5
    urllib3: 1.25.11
    wcwidth: 0.2.5
    webcolors: 1.11.1
    wheel: 0.36.0
    wheel-filename: 1.3.0