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Opened 4 years ago
Closed 4 years ago
#5591 closed defect (can't reproduce)
Crash creating morph interpolation
| Reported by: | Owned by: | Tom Goddard | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Structure Comparison | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: macOS-10.16-x86_64-i386-64bit
ChimeraX Version: 1.2.5 (2021-05-24 04:13:57 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Fatal Python error: Segmentation fault
Thread 0x000070000b9b1000 (most recent call first):
File "/Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/threading.py", line 306 in wait
File "/Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/threading.py", line 558 in wait
File "/Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/threading.py", line 1252 in run
File "/Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/threading.py", line 932 in _bootstrap_inner
File "/Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/threading.py", line 890 in _bootstrap
Current thread 0x000000011ceebe00 (most recent call first):
File "/Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/chimerax/morph/interpolate.py", line 129 in interpolate
File "/Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/chimerax/morph/interpolate.py", line 40 in interpolate
File "/Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/chimerax/morph/motion.py", line 153 in interpolate
File "/Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/chimerax/morph/motion.py", line 25 in compute_morph
File "/Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/chimerax/morph/morph.py", line 73 in morph
File "/Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/chimerax/core/commands/cli.py", line 2852 in run
File "/Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/chimerax/cmd_line/tool.py", line 280 in execute
File "/Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/chimerax/cmd_line/tool.py", line 117 in keyPressEvent
File "/Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/chimerax/ui/gui.py", line 293 in event_loop
File "/Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/ChimeraX_main.py", line 866 in init
File "/Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/ChimeraX_main.py", line 1015 in
File "/Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/runpy.py", line 87 in _run_code
File "/Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/runpy.py", line 194 in _run_module_as_main
Process: ChimeraX [28919]
Path: /Applications/ChimeraX-1.2.5.app/Contents/MacOS/ChimeraX
Identifier: edu.ucsf.cgl.ChimeraX
Version: 1.2.5 (1.2.5.0)
Code Type: X86-64 (Native)
Parent Process: ??? [1]
Responsible: ChimeraX [28919]
User ID: 22363
Date/Time: 2021-11-12 10:45:28.582 +0100
OS Version: macOS 11.6.1 (20G224)
Report Version: 12
Anonymous UUID: 55E93DAA-9C1F-A41C-C515-90AC495FF2BB
Sleep/Wake UUID: BAEE2EE2-C496-43BC-AA49-D1D2C9F8552D
Time Awake Since Boot: 78000 seconds
Time Since Wake: 500 seconds
System Integrity Protection: enabled
Crashed Thread: 0 CrBrowserMain Dispatch queue: com.apple.main-thread
Exception Type: EXC_BAD_ACCESS (SIGSEGV)
Exception Codes: KERN_INVALID_ADDRESS at 0x00007ff739434010
Exception Note: EXC_CORPSE_NOTIFY
VM Regions Near 0x7ff739434010:
MALLOC_LARGE 7ff7393d8000-7ff739434000 [ 368K] rw-/rwx SM=PRV
-->
MALLOC_LARGE 7ff73a6ba000-7ff73a74c000 [ 584K] rw-/rwx SM=PRV
Thread 0 Crashed:: CrBrowserMain Dispatch queue: com.apple.main-thread
0 libsystem_kernel.dylib 0x00007fff2034792e __pthread_kill + 10
1 libsystem_pthread.dylib 0x00007fff203765bd pthread_kill + 263
2 libsystem_c.dylib 0x00007fff2025abd5 raise + 26
3 libsystem_platform.dylib 0x00007fff203bbd7d _sigtramp + 29
4 ??? 000000000000000000 0 + 0
5 org.python.python 0x000000010ad80018 cfunction_call_varargs + 120
6 org.python.python 0x000000010ad7fa85 _PyObject_MakeTpCall + 373
7 org.python.python 0x000000010ae4e665 call_function + 533
8 org.python.python 0x000000010ae4b505 _PyEval_EvalFrameDefault + 25829
9 org.python.python 0x000000010ad803d0 function_code_fastcall + 128
10 org.python.python 0x000000010ae4e60c call_function + 444
11 org.python.python 0x000000010ae4b44a _PyEval_EvalFrameDefault + 25642
12 org.python.python 0x000000010ad803d0 function_code_fastcall + 128
13 org.python.python 0x000000010ae4e60c call_function + 444
14 org.python.python 0x000000010ae4b505 _PyEval_EvalFrameDefault + 25829
15 org.python.python 0x000000010ae4f454 _PyEval_EvalCodeWithName + 2804
16 org.python.python 0x000000010ad8056e _PyFunction_Vectorcall + 270
17 org.python.python 0x000000010ae4e60c call_function + 444
18 org.python.python 0x000000010ae4b44a _PyEval_EvalFrameDefault + 25642
19 org.python.python 0x000000010ae4f454 _PyEval_EvalCodeWithName + 2804
20 org.python.python 0x000000010ad8056e _PyFunction_Vectorcall + 270
21 org.python.python 0x000000010ae4e60c call_function + 444
22 org.python.python 0x000000010ae4b598 _PyEval_EvalFrameDefault + 25976
23 org.python.python 0x000000010ae4f454 _PyEval_EvalCodeWithName + 2804
24 org.python.python 0x000000010ad8056e _PyFunction_Vectorcall + 270
25 org.python.python 0x000000010ad7fdad PyVectorcall_Call + 109
26 org.python.python 0x000000010ae4b978 _PyEval_EvalFrameDefault + 26968
27 org.python.python 0x000000010ae4f454 _PyEval_EvalCodeWithName + 2804
28 org.python.python 0x000000010ad8056e _PyFunction_Vectorcall + 270
29 org.python.python 0x000000010ae4e60c call_function + 444
30 org.python.python 0x000000010ae4b44a _PyEval_EvalFrameDefault + 25642
31 org.python.python 0x000000010ae4f454 _PyEval_EvalCodeWithName + 2804
32 org.python.python 0x000000010ad8056e _PyFunction_Vectorcall + 270
33 org.python.python 0x000000010ad82adb method_vectorcall + 235
34 org.python.python 0x000000010ad7fdad PyVectorcall_Call + 109
35 QtCore.abi3.so 0x0000000118069957 PyQtSlot::call(_object*, _object*) const + 39
36 QtCore.abi3.so 0x0000000118069866 PyQtSlot::invoke(void**, _object*, void*, bool) const + 374
37 QtCore.abi3.so 0x000000011806a455 PyQtSlotProxy::unislot(void**) + 85
38 QtCore.abi3.so 0x000000011806a3ca PyQtSlotProxy::qt_metacall(QMetaObject::Call, int, void**) + 58
39 QtCore 0x000000011844df6e void doActivate(QObject*, int, void**) + 1118
40 QtCore 0x000000011844e0d5 void doActivate(QObject*, int, void**) + 1477
41 QtWidgets 0x000000011b703b14 QWidgetLineControl::processKeyEvent(QKeyEvent*) + 548
42 QtWidgets 0x000000011b6fa732 QLineEdit::keyPressEvent(QKeyEvent*) + 34
43 QtWidgets 0x000000011b5f2e4f QWidget::event(QEvent*) + 527
44 QtWidgets 0x000000011b6f9ae7 QLineEdit::event(QEvent*) + 727
45 QtWidgets 0x000000011b6bdcd0 QComboBox::keyPressEvent(QKeyEvent*) + 784
46 QtWidgets.abi3.so 0x0000000118b91e5b meth_QComboBox_keyPressEvent(_object*, _object*) + 139
47 org.python.python 0x000000010ad800c2 cfunction_call_varargs + 290
48 org.python.python 0x000000010ad7fa85 _PyObject_MakeTpCall + 373
49 org.python.python 0x000000010ae4e665 call_function + 533
50 org.python.python 0x000000010ae4b46e _PyEval_EvalFrameDefault + 25678
51 org.python.python 0x000000010ae4f454 _PyEval_EvalCodeWithName + 2804
52 org.python.python 0x000000010ad8056e _PyFunction_Vectorcall + 270
53 org.python.python 0x000000010ad82b7c method_vectorcall + 396
54 org.python.python 0x000000010ad7fdad PyVectorcall_Call + 109
55 sip.cpython-38-darwin.so 0x000000011893d9d7 sip_api_call_procedure_method + 199
56 QtWidgets.abi3.so 0x0000000118a92f18 sipQComboBox::keyPressEvent(QKeyEvent*) + 104
57 QtWidgets 0x000000011b5f2e4f QWidget::event(QEvent*) + 527
58 QtWidgets 0x000000011b6bd634 QComboBox::event(QEvent*) + 372
59 QtWidgets.abi3.so 0x0000000118a9241f sipQComboBox::event(QEvent*) + 191
60 QtWidgets 0x000000011b5b89ea QApplicationPrivate::notify_helper(QObject*, QEvent*) + 266
61 QtWidgets 0x000000011b5b9fd3 QApplication::notify(QObject*, QEvent*) + 947
62 QtWidgets.abi3.so 0x0000000118aaddb9 sipQApplication::notify(QObject*, QEvent*) + 233
63 QtCore 0x000000011841aa34 QCoreApplication::notifyInternal2(QObject*, QEvent*) + 212
64 QtWidgets 0x000000011b611351 QWidgetWindow::handleKeyEvent(QKeyEvent*) + 145
65 QtWidgets 0x000000011b610727 QWidgetWindow::event(QEvent*) + 295
66 QtWidgets 0x000000011b5b89ea QApplicationPrivate::notify_helper(QObject*, QEvent*) + 266
67 QtWidgets 0x000000011b5b9e11 QApplication::notify(QObject*, QEvent*) + 497
68 QtWidgets.abi3.so 0x0000000118aaddb9 sipQApplication::notify(QObject*, QEvent*) + 233
69 QtCore 0x000000011841aa34 QCoreApplication::notifyInternal2(QObject*, QEvent*) + 212
70 QtGui 0x000000011bc269c8 QGuiApplicationPrivate::processKeyEvent(QWindowSystemInterfacePrivate::KeyEvent*) + 152
71 QtGui 0x000000011bc0ad7b QWindowSystemInterface::sendWindowSystemEvents(QFlags) + 219
72 QtGui 0x000000011bc05b72 QWindowSystemInterface::flushWindowSystemEvents(QFlags) + 594
73 libqcocoa.dylib 0x000000012941e848 -[QNSView(Keys) handleKeyEvent:eventType:] + 1144
74 libqcocoa.dylib 0x000000012941ea18 -[QNSView(Keys) keyDown:] + 88
75 com.apple.AppKit 0x00007fff22e00578 -[NSWindow(NSEventRouting) _reallySendEvent:isDelayedEvent:] + 6482
76 com.apple.AppKit 0x00007fff22dfea06 -[NSWindow(NSEventRouting) sendEvent:] + 347
77 libqcocoa.dylib 0x0000000129421dd5 -[QNSWindow sendEvent:] + 549
78 com.apple.AppKit 0x00007fff22dfd881 -[NSApplication(NSEvent) sendEvent:] + 3021
79 libqcocoa.dylib 0x000000012942912a -[QNSApplication sendEvent:] + 74
80 com.apple.AppKit 0x00007fff230d5be1 -[NSApplication _handleEvent:] + 65
81 com.apple.AppKit 0x00007fff22c65c8e -[NSApplication run] + 623
82 libqcocoa.dylib 0x000000012942562f QCocoaEventDispatcher::processEvents(QFlags) + 2495
83 QtCore 0x0000000118416acf QEventLoop::exec(QFlags) + 431
84 QtCore 0x000000011841b042 QCoreApplication::exec() + 130
85 QtWidgets.abi3.so 0x0000000118b9f702 meth_QApplication_exec_(_object*, _object*) + 82
86 org.python.python 0x000000010ad800c2 cfunction_call_varargs + 290
87 org.python.python 0x000000010ad7fa85 _PyObject_MakeTpCall + 373
88 org.python.python 0x000000010ae4e665 call_function + 533
89 org.python.python 0x000000010ae4b46e _PyEval_EvalFrameDefault + 25678
90 org.python.python 0x000000010ad803d0 function_code_fastcall + 128
91 org.python.python 0x000000010ad82a9a method_vectorcall + 170
92 org.python.python 0x000000010ae4e60c call_function + 444
93 org.python.python 0x000000010ae4b46e _PyEval_EvalFrameDefault + 25678
94 org.python.python 0x000000010ae4f454 _PyEval_EvalCodeWithName + 2804
95 org.python.python 0x000000010ad8056e _PyFunction_Vectorcall + 270
96 org.python.python 0x000000010ae4e60c call_function + 444
97 org.python.python 0x000000010ae4b505 _PyEval_EvalFrameDefault + 25829
98 org.python.python 0x000000010ae4f454 _PyEval_EvalCodeWithName + 2804
99 org.python.python 0x000000010ae44f44 PyEval_EvalCode + 100
100 org.python.python 0x000000010ae42332 builtin_exec + 626
101 org.python.python 0x000000010adbc5ff cfunction_vectorcall_FASTCALL + 175
102 org.python.python 0x000000010ae4e60c call_function + 444
103 org.python.python 0x000000010ae4b505 _PyEval_EvalFrameDefault + 25829
104 org.python.python 0x000000010ae4f454 _PyEval_EvalCodeWithName + 2804
105 org.python.python 0x000000010ad8056e _PyFunction_Vectorcall + 270
106 org.python.python 0x000000010ae4e60c call_function + 444
107 org.python.python 0x000000010ae4b505 _PyEval_EvalFrameDefault + 25829
108 org.python.python 0x000000010ae4f454 _PyEval_EvalCodeWithName + 2804
109 org.python.python 0x000000010ad8056e _PyFunction_Vectorcall + 270
110 org.python.python 0x000000010ad7fdad PyVectorcall_Call + 109
111 org.python.python 0x000000010aeb1eb3 pymain_run_module + 195
112 org.python.python 0x000000010aeb1585 Py_RunMain + 1413
113 org.python.python 0x000000010aeb1bdf pymain_main + 223
114 org.python.python 0x000000010aeb1aeb Py_Main + 43
115 edu.ucsf.cgl.ChimeraX 0x000000010ad58dc8 main + 120
116 libdyld.dylib 0x00007fff20391f3d start + 1
Thread 1:: ThreadPoolServiceThread
0 libsystem_kernel.dylib 0x00007fff2034a1d2 kevent64 + 10
1 QtWebEngineCore 0x000000011edb3e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x000000011edb3cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x000000011ed3c62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x000000011ed007cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x000000011ed47a94 base::internal::ServiceThread::Run(base::RunLoop*) + 20
6 QtWebEngineCore 0x000000011ed5ba7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x000000011eda4e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff203768fc _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff20372443 thread_start + 15
Thread 2:: ThreadPoolBackgroundWorker
0 libsystem_kernel.dylib 0x00007fff203412ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2034162c mach_msg + 60
2 QtWebEngineCore 0x000000011eda9492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011ed51778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x000000011ed52150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x000000011ed51c44 base::internal::WorkerThread::RunBackgroundPooledWorker() + 20
6 QtWebEngineCore 0x000000011eda4e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff203768fc _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff20372443 thread_start + 15
Thread 3:: Chrome_IOThread
0 libsystem_kernel.dylib 0x00007fff2034a1d2 kevent64 + 10
1 QtWebEngineCore 0x000000011edb3e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x000000011edb3cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x000000011ed3c62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x000000011ed007cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x0000000122c80f06 content::BrowserProcessSubThread::IOThreadRun(base::RunLoop*) + 102
6 QtWebEngineCore 0x000000011ed5ba7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x000000011eda4e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff203768fc _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff20372443 thread_start + 15
Thread 4:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff203412ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2034162c mach_msg + 60
2 QtWebEngineCore 0x000000011eda9492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011eda92cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000011ecd11db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x000000011ed3c62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x000000011ed007cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x000000011ed5ba7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x000000011eda4e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff203768fc _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff20372443 thread_start + 15
Thread 5:: CompositorTileWorker1
0 libsystem_kernel.dylib 0x00007fff20343cde __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff20376e49 _pthread_cond_wait + 1298
2 QtWebEngineCore 0x000000011eda0e18 base::ConditionVariable::Wait() + 104
3 QtWebEngineCore 0x00000001200585f8 non-virtual thunk to cc::SingleThreadTaskGraphRunner::Run() + 56
4 QtWebEngineCore 0x000000011eda4e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
5 libsystem_pthread.dylib 0x00007fff203768fc _pthread_start + 224
6 libsystem_pthread.dylib 0x00007fff20372443 thread_start + 15
Thread 6:: Chrome_InProcGpuThread
0 libsystem_kernel.dylib 0x00007fff203412ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2034162c mach_msg + 60
2 QtWebEngineCore 0x000000011eda9492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011ecd120f base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 223
4 QtWebEngineCore 0x000000011ed3c62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
5 QtWebEngineCore 0x000000011ed007cb base::RunLoop::Run() + 395
6 QtWebEngineCore 0x000000011ed5ba7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x000000011eda4e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff203768fc _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff20372443 thread_start + 15
Thread 7:: Chrome_ChildIOThread
0 libsystem_kernel.dylib 0x00007fff2034a1d2 kevent64 + 10
1 QtWebEngineCore 0x000000011edb3e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x000000011edb3cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x000000011ed3c62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x000000011ed007cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x000000011ed5ba7d base::Thread::ThreadMain() + 413
6 QtWebEngineCore 0x000000011eda4e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff203768fc _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff20372443 thread_start + 15
Thread 8:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff203412ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2034162c mach_msg + 60
2 QtWebEngineCore 0x000000011eda9492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011eda92cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000011ecd11db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x000000011ed3c62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x000000011ed007cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x000000011ed5ba7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x000000011eda4e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff203768fc _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff20372443 thread_start + 15
Thread 9:: VizCompositorThread
0 libsystem_kernel.dylib 0x00007fff203412ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2034162c mach_msg + 60
2 QtWebEngineCore 0x000000011eda9492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011eda92cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000011ecd11db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x000000011ed3c62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x000000011ed007cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x000000011ed5ba7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x000000011eda4e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff203768fc _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff20372443 thread_start + 15
Thread 10:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff203412ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2034162c mach_msg + 60
2 QtWebEngineCore 0x000000011eda9492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011eda92cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000011ecd11db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x000000011ed3c62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x000000011ed007cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x000000011ed5ba7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x000000011eda4e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff203768fc _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff20372443 thread_start + 15
Thread 11:: ThreadPoolSingleThreadForegroundBlocking0
0 libsystem_kernel.dylib 0x00007fff203412ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2034162c mach_msg + 60
2 QtWebEngineCore 0x000000011eda9492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011eda92cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000011ed5176a base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 42
5 QtWebEngineCore 0x000000011ed52150 base::internal::WorkerThread::RunWorker() + 1024
6 QtWebEngineCore 0x000000011ed51d34 base::internal::WorkerThread::RunDedicatedWorker() + 20
7 QtWebEngineCore 0x000000011eda4e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff203768fc _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff20372443 thread_start + 15
Thread 12:: MemoryInfra
0 libsystem_kernel.dylib 0x00007fff203412ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2034162c mach_msg + 60
2 QtWebEngineCore 0x000000011eda9492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011eda92cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000011ecd11db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x000000011ed3c62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x000000011ed007cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x000000011ed5ba7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x000000011eda4e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff203768fc _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff20372443 thread_start + 15
Thread 13:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff203412ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2034162c mach_msg + 60
2 QtWebEngineCore 0x000000011eda9492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011eda92cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000011ecd11db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x000000011ed3c62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x000000011ed007cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x000000011ed5ba7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x000000011eda4e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff203768fc _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff20372443 thread_start + 15
Thread 14:: com.apple.NSEventThread
0 libsystem_kernel.dylib 0x00007fff203412ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2034162c mach_msg + 60
2 com.apple.CoreFoundation 0x00007fff2046e49f __CFRunLoopServiceMachPort + 316
3 com.apple.CoreFoundation 0x00007fff2046cb7f __CFRunLoopRun + 1328
4 com.apple.CoreFoundation 0x00007fff2046bf8c CFRunLoopRunSpecific + 563
5 com.apple.AppKit 0x00007fff22dfb23a _NSEventThread + 124
6 libsystem_pthread.dylib 0x00007fff203768fc _pthread_start + 224
7 libsystem_pthread.dylib 0x00007fff20372443 thread_start + 15
Thread 15:: ThreadPoolSingleThreadSharedBackgroundBlocking1
0 libsystem_kernel.dylib 0x00007fff203412ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2034162c mach_msg + 60
2 QtWebEngineCore 0x000000011eda9492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011eda92cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000011ed5176a base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 42
5 QtWebEngineCore 0x000000011ed51e3d base::internal::WorkerThread::RunWorker() + 237
6 QtWebEngineCore 0x000000011ed51c74 base::internal::WorkerThread::RunBackgroundSharedWorker() + 20
7 QtWebEngineCore 0x000000011eda4e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff203768fc _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff20372443 thread_start + 15
Thread 16:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff203412ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2034162c mach_msg + 60
2 QtWebEngineCore 0x000000011eda9492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011ed51778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x000000011ed52150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x000000011ed51cd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x000000011eda4e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff203768fc _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff20372443 thread_start + 15
Thread 17:
0 libsystem_kernel.dylib 0x00007fff203413c2 swtch_pri + 10
1 libsystem_pthread.dylib 0x00007fff20374070 cthread_yield + 11
2 libopenblas.0.dylib 0x000000010be792ae blas_thread_server + 558
3 libsystem_pthread.dylib 0x00007fff203768fc _pthread_start + 224
4 libsystem_pthread.dylib 0x00007fff20372443 thread_start + 15
Thread 18:
0 libsystem_kernel.dylib 0x00007fff203413c2 swtch_pri + 10
1 libsystem_pthread.dylib 0x00007fff20374070 cthread_yield + 11
2 libopenblas.0.dylib 0x000000010be792ae blas_thread_server + 558
3 libsystem_pthread.dylib 0x00007fff203768fc _pthread_start + 224
4 libsystem_pthread.dylib 0x00007fff20372443 thread_start + 15
Thread 19:
0 libsystem_kernel.dylib 0x00007fff20343cde __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff20376e49 _pthread_cond_wait + 1298
2 libopenblas.0.dylib 0x000000010be7927b blas_thread_server + 507
3 libsystem_pthread.dylib 0x00007fff203768fc _pthread_start + 224
4 libsystem_pthread.dylib 0x00007fff20372443 thread_start + 15
Thread 20:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff203412ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2034162c mach_msg + 60
2 QtWebEngineCore 0x000000011eda9492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011ed51778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x000000011ed52150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x000000011ed51cd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x000000011eda4e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff203768fc _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff20372443 thread_start + 15
Thread 21:
0 libsystem_pthread.dylib 0x00007fff20372420 start_wqthread + 0
Thread 22:
0 libsystem_kernel.dylib 0x00007fff20343cde __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff20376e49 _pthread_cond_wait + 1298
2 org.python.python 0x000000010aea1b2c PyThread_acquire_lock_timed + 700
3 org.python.python 0x000000010aeeec4f acquire_timed + 111
4 org.python.python 0x000000010aeeed60 lock_PyThread_acquire_lock + 48
5 org.python.python 0x000000010ad88ef5 method_vectorcall_VARARGS_KEYWORDS + 373
6 org.python.python 0x000000010ae4e60c call_function + 444
7 org.python.python 0x000000010ae4b44a _PyEval_EvalFrameDefault + 25642
8 org.python.python 0x000000010ae4f454 _PyEval_EvalCodeWithName + 2804
9 org.python.python 0x000000010ad8056e _PyFunction_Vectorcall + 270
10 org.python.python 0x000000010ae4e60c call_function + 444
11 org.python.python 0x000000010ae4b44a _PyEval_EvalFrameDefault + 25642
12 org.python.python 0x000000010ae4f454 _PyEval_EvalCodeWithName + 2804
13 org.python.python 0x000000010ad8056e _PyFunction_Vectorcall + 270
14 org.python.python 0x000000010ae4e60c call_function + 444
15 org.python.python 0x000000010ae4b44a _PyEval_EvalFrameDefault + 25642
16 org.python.python 0x000000010ad803d0 function_code_fastcall + 128
17 org.python.python 0x000000010ae4e60c call_function + 444
18 org.python.python 0x000000010ae4b44a _PyEval_EvalFrameDefault + 25642
19 org.python.python 0x000000010ad803d0 function_code_fastcall + 128
20 org.python.python 0x000000010ae4e60c call_function + 444
21 org.python.python 0x000000010ae4b44a _PyEval_EvalFrameDefault + 25642
22 org.python.python 0x000000010ad803d0 function_code_fastcall + 128
23 org.python.python 0x000000010ad82adb method_vectorcall + 235
24 org.python.python 0x000000010ad7fdad PyVectorcall_Call + 109
25 org.python.python 0x000000010aeee64a t_bootstrap + 74
26 org.python.python 0x000000010aea1619 pythread_wrapper + 25
27 libsystem_pthread.dylib 0x00007fff203768fc _pthread_start + 224
28 libsystem_pthread.dylib 0x00007fff20372443 thread_start + 15
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x00000001195c8e00 rcx: 0x00007ff790e4da58 rdx: 0x0000000000000000
rdi: 0x0000000000000103 rsi: 0x000000000000000b rbp: 0x00007ff790e4da80 rsp: 0x00007ff790e4da58
r8: 0x00007ff790e4df48 r9: 0x0d4976a295398870 r10: 0x00000001195c8e00 r11: 0x0000000000000246
r12: 0x0000000000000103 r13: 0x00007ffee4ea2e20 r14: 0x000000000000000b r15: 0x0000000000000016
rip: 0x00007fff2034792e rfl: 0x0000000000000246 cr2: 0x000000010af967e0
Logical CPU: 0
Error Code: 0x02000148
Trap Number: 133
Thread 0 instruction stream:
fe ff ff e8 c9 08 00 00-49 89 c4 48 8d bd 70 fe ........I..H..p.
ff ff e8 ba 08 00 00 48-89 c3 48 8d bd 00 ff ff .......H..H.....
ff e8 ab 08 00 00 4d 85-f6 f2 0f 10 5d 98 7e 7b ......M.....].~{
f2 0f 10 05 a7 09 00 00-f2 0f 5c c3 31 c9 90 41 ..........\.1..A
8b 14 8f 8d 14 52 48 63-d2 f2 41 0f 10 0c d4 f2 .....RHc..A.....
0f 59 c8 f2 0f 10 14 d3-f2 0f 59 d3 f2 0f 58 d1 .Y........Y...X.
[f2]0f 11 14 d0 f2 41 0f-10 4c d4 08 f2 0f 59 c8 ......A..L....Y. /Applications/ChimeraX-1.2.5.app/Contents/MacOS/ChimeraX
0x10ad5f000 - 0x10af95fff +org.python.python (3.8.8, [c] 2001-2019 Python Software Foundation. - 3.8.8) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/Python
0x10b0f5000 - 0x10b0f7fff +_heapq.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_heapq.cpython-38-darwin.so
0x10b0ff000 - 0x10b104fff +zlib.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/zlib.cpython-38-darwin.so
0x10b10e000 - 0x10b110fff +_bz2.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_bz2.cpython-38-darwin.so
0x10b119000 - 0x10b14afff +_lzma.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_lzma.cpython-38-darwin.so
0x10b159000 - 0x10b15afff +grp.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/grp.cpython-38-darwin.so
0x10b162000 - 0x10b16afff +math.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/math.cpython-38-darwin.so
0x10b176000 - 0x10b177fff +_bisect.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_bisect.cpython-38-darwin.so
0x10b17f000 - 0x10b183fff +_sha512.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_sha512.cpython-38-darwin.so
0x10b18c000 - 0x10b18dfff +_random.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_random.cpython-38-darwin.so
0x10b196000 - 0x10b19bfff +_json.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_json.cpython-38-darwin.so
0x10b1a5000 - 0x10b1b9fff +_ssl.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_ssl.cpython-38-darwin.so
0x10b1d2000 - 0x10b22afff +libssl.1.1.dylib (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/libssl.1.1.dylib
0x10b259000 - 0x10b46ffff +libcrypto.1.1.dylib (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/libcrypto.1.1.dylib
0x10b50d000 - 0x10b51afff +_socket.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_socket.cpython-38-darwin.so
0x10b527000 - 0x10b52afff +select.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/select.cpython-38-darwin.so
0x10b534000 - 0x10b539fff +_struct.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_struct.cpython-38-darwin.so
0x10b546000 - 0x10b54afff +binascii.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/binascii.cpython-38-darwin.so
0x10b553000 - 0x10b556fff +_hashlib.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_hashlib.cpython-38-darwin.so
0x10b560000 - 0x10b566fff +_blake2.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_blake2.cpython-38-darwin.so
0x10b570000 - 0x10b580fff +_sha3.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_sha3.cpython-38-darwin.so
0x10b58a000 - 0x10b599fff +_datetime.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_datetime.cpython-38-darwin.so
0x10b5aa000 - 0x10b5aafff +_scproxy.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_scproxy.cpython-38-darwin.so
0x10b5b2000 - 0x10b5fbfff +_decimal.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_decimal.cpython-38-darwin.so
0x10b61a000 - 0x10b643fff +pyexpat.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/pyexpat.cpython-38-darwin.so
0x10b65c000 - 0x10b65dfff +_queue.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_queue.cpython-38-darwin.so
0x10b666000 - 0x10b67cfff +_pickle.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_pickle.cpython-38-darwin.so
0x10b68c000 - 0x10b690fff +_csv.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_csv.cpython-38-darwin.so
0x10b69a000 - 0x10b69bfff +_posixsubprocess.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_posixsubprocess.cpython-38-darwin.so
0x10b6a3000 - 0x10ba18fff +_multiarray_umath.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/numpy/core/_multiarray_umath.cpython-38-darwin.so
0x10bb40000 - 0x10f597fff +libopenblas.0.dylib (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/numpy/.dylibs/libopenblas.0.dylib
0x10f88c000 - 0x10f9a3fff +libgfortran.3.dylib (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/numpy/.dylibs/libgfortran.3.dylib
0x10fa11000 - 0x10fa47fff +libquadmath.0.dylib (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/numpy/.dylibs/libquadmath.0.dylib
0x10fa5b000 - 0x10fa70fff +libgcc_s.1.dylib (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/numpy/.dylibs/libgcc_s.1.dylib
0x115a80000 - 0x115a8dfff +_multiarray_tests.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/numpy/core/_multiarray_tests.cpython-38-darwin.so
0x115aa3000 - 0x115ab4fff +_ctypes.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_ctypes.cpython-38-darwin.so
0x115acb000 - 0x115accfff +lapack_lite.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/numpy/linalg/lapack_lite.cpython-38-darwin.so
0x115ad4000 - 0x115aedfff +_umath_linalg.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/numpy/linalg/_umath_linalg.cpython-38-darwin.so
0x115b01000 - 0x115b12fff +_pocketfft_internal.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/numpy/fft/_pocketfft_internal.cpython-38-darwin.so
0x115b1b000 - 0x115b86fff +mtrand.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/numpy/random/mtrand.cpython-38-darwin.so
0x115be1000 - 0x115bfffff +bit_generator.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/numpy/random/bit_generator.cpython-38-darwin.so
0x115c20000 - 0x115c52fff +_common.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/numpy/random/_common.cpython-38-darwin.so
0x115c6f000 - 0x115cbefff +_bounded_integers.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/numpy/random/_bounded_integers.cpython-38-darwin.so
0x115ce5000 - 0x115cf3fff +_mt19937.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/numpy/random/_mt19937.cpython-38-darwin.so
0x115d04000 - 0x115d10fff +_philox.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/numpy/random/_philox.cpython-38-darwin.so
0x115d20000 - 0x115d29fff +_pcg64.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/numpy/random/_pcg64.cpython-38-darwin.so
0x115d38000 - 0x115d3ffff +_sfc64.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/numpy/random/_sfc64.cpython-38-darwin.so
0x115d4c000 - 0x115dcdfff +_generator.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/numpy/random/_generator.cpython-38-darwin.so
0x117e2d000 - 0x117e2dfff +_arrays.cpython-38-darwin.so (0) /Applications/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/chimerax/arrays/_arrays.cpython-38-darwin.so
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0x7fff478ef000 - 0x7fff4792ffff com.apple.osanalytics.OSAnalytics (1.0 - 1) /System/Library/PrivateFrameworks/OSAnalytics.framework/Versions/A/OSAnalytics
0x7fff4817d000 - 0x7fff48198fff com.apple.network.statistics.framework (1.2 - 1) /System/Library/PrivateFrameworks/NetworkStatistics.framework/Versions/A/NetworkStatistics
0x7fff51565000 - 0x7fff51592fff com.apple.HelpData (2.3 - 201) /System/Library/PrivateFrameworks/HelpData.framework/Versions/A/HelpData
0x7fff51593000 - 0x7fff515adfff com.apple.shortcut (2.16 - 118) /System/Library/PrivateFrameworks/Shortcut.framework/Versions/A/Shortcut
0x7fff515ae000 - 0x7fff5164dfff com.apple.Symbolication (12.5 - 64544.70.1) /System/Library/PrivateFrameworks/Symbolication.framework/Versions/A/Symbolication
0x7fff5183d000 - 0x7fff51840fff libpmsample.dylib (227.140.1) /usr/lib/libpmsample.dylib
0x7fff53ed5000 - 0x7fff53f0bfff com.apple.ReplayKit (1.0 - 1) /System/Library/Frameworks/ReplayKit.framework/Versions/A/ReplayKit
0x7fff55502000 - 0x7fff55505fff com.apple.ForceFeedback (1.0.6 - 1.0.6) /System/Library/Frameworks/ForceFeedback.framework/Versions/A/ForceFeedback
0x7fff5e0cd000 - 0x7fff5eb30fff libSC.dylib (4.6.20) /System/Library/Extensions/AMDShared.bundle/Contents/PlugIns/libSC.dylib
0x7fff695fe000 - 0x7fff69602fff libmetal_timestamp.dylib (31001.192.1) /System/Library/PrivateFrameworks/GPUCompiler.framework/Versions/31001/Libraries/libmetal_timestamp.dylib
0x7fff6ba49000 - 0x7fff6ba4ffff libCoreFSCache.dylib (200.11) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libCoreFSCache.dylib
0x7fff6ba50000 - 0x7fff6ba54fff libCoreVMClient.dylib (200.11) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libCoreVMClient.dylib
0x7fff6ba55000 - 0x7fff6ba64fff com.apple.opengl (18.5.9 - 18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/OpenGL
0x7fff6ba65000 - 0x7fff6ba67fff libCVMSPluginSupport.dylib (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libCVMSPluginSupport.dylib
0x7fff6ba68000 - 0x7fff6ba70fff libGFXShared.dylib (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGFXShared.dylib
0x7fff6ba71000 - 0x7fff6baa4fff libGLImage.dylib (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLImage.dylib
0x7fff6baa5000 - 0x7fff6bae1fff libGLU.dylib (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLU.dylib
0x7fff6bae2000 - 0x7fff6bc75fff libGLProgrammability.dylib (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLProgrammability.dylib
0x7fff6bc76000 - 0x7fff6bc80fff libGL.dylib (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib
0x7fff6bc81000 - 0x7fff6bdfefff GLEngine (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Resources/GLEngine.bundle/GLEngine
0x7fff6bdff000 - 0x7fff6be27fff GLRendererFloat (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Resources/GLRendererFloat.bundle/GLRendererFloat
0x7fff6d0c0000 - 0x7fff6d118fff com.apple.opencl (4.6 - 4.6) /System/Library/Frameworks/OpenCL.framework/Versions/A/OpenCL
0x7fff6dc42000 - 0x7fff6de5dfff com.apple.AMDMTLBronzeDriver (4.6.20 - 4.0.6) /System/Library/Extensions/AMDMTLBronzeDriver.bundle/Contents/MacOS/AMDMTLBronzeDriver
0x7fff6dfc2000 - 0x7fff6e011fff ATIRadeonX4000SCLib.dylib (4.6.20) /System/Library/Extensions/AMDRadeonX4000GLDriver.bundle/Contents/MacOS/ATIRadeonX4000SCLib.dylib
0x7fff6e1c2000 - 0x7fff6e1c9fff com.apple.agl (3.3.4 - AGL-3.3.3) /System/Library/Frameworks/AGL.framework/Versions/A/AGL
0x7fff6e1ca000 - 0x7fff6e2b1fff com.apple.audio.AVFAudio (1.0 - 477.88) /System/Library/Frameworks/AVFAudio.framework/Versions/A/AVFAudio
0x7fff6f833000 - 0x7fff6f845fff com.apple.CMImaging (1.0 - 82.6) /System/Library/PrivateFrameworks/CMImaging.framework/Versions/A/CMImaging
0x7fff73b47000 - 0x7fff73b52fff com.apple.SymptomAnalytics (1.0 - 1431.140.1) /System/Library/PrivateFrameworks/Symptoms.framework/Frameworks/SymptomAnalytics.framework/Versions/A/SymptomAnalytics
0x7fff73d68000 - 0x7fff73d80fff com.apple.SymptomPresentationFeed (1.0 - 1431.140.1) /System/Library/PrivateFrameworks/Symptoms.framework/Frameworks/SymptomPresentationFeed.framework/Versions/A/SymptomPresentationFeed
0x7fff778f8000 - 0x7fff778fffff libRosetta.dylib (203.58) /usr/lib/libRosetta.dylib
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=1.1G resident=0K(0%) swapped_out_or_unallocated=1.1G(100%)
Writable regions: Total=3.3G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=3.3G(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 512K 4
Activity Tracing 256K 1
CG backing stores 5688K 12
CG image 3616K 48
CG raster data 3168K 7
CoreAnimation 10.0M 51
CoreGraphics 16K 3
CoreServices 624K 2
CoreUI image data 5196K 51
Foundation 32K 2
Kernel Alloc Once 1364K 4
MALLOC 2.6G 1700
MALLOC guard page 32K 8
MALLOC_LARGE (reserved) 384K 1 reserved VM address space (unallocated)
MALLOC_NANO (reserved) 256.0M 1 reserved VM address space (unallocated)
Mach message 24K 2
OpenGL GLSL 384K 5
STACK GUARD 88K 22
Stack 154.7M 23
Stack Guard 56.0M 1
VM_ALLOCATE 331.2M 302
__DATA 43.2M 609
__DATA_CONST 22.1M 269
__DATA_DIRTY 1269K 175
__FONT_DATA 4K 1
__GLSLBUILTINS 5176K 1
__LINKEDIT 593.4M 155
__OBJC_RO 70.3M 1
__OBJC_RW 2496K 2
__TEXT 576.9M 583
__UNICODE 588K 1
mapped file 591.3M 66
shared memory 3464K 23
=========== ======= =======
TOTAL 5.2G 4136
TOTAL, minus reserved VM space 5.0G 4136
Log:
UCSF ChimeraX version: 1.2.5 (2021-05-24)
© 2016-2021 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 ATI-4.6.20
OpenGL renderer: AMD Radeon Pro 555 OpenGL Engine
OpenGL vendor: ATI Technologies Inc.Hardware:
Hardware Overview:
Model Name: iMac
Model Identifier: iMac18,2
Processor Name: Quad-Core Intel Core i5
Processor Speed: 3 GHz
Number of Processors: 1
Total Number of Cores: 4
L2 Cache (per Core): 256 KB
L3 Cache: 6 MB
Memory: 16 GB
System Firmware Version: 447.40.12.0.0
SMC Version (system): 2.40f1
Software:
System Software Overview:
System Version: macOS 11.6.1 (20G224)
Kernel Version: Darwin 20.6.0
Time since boot: 2 days 17:11
Graphics/Displays:
Radeon Pro 555:
Chipset Model: Radeon Pro 555
Type: GPU
Bus: PCIe
PCIe Lane Width: x8
VRAM (Total): 2 GB
Vendor: AMD (0x1002)
Device ID: 0x67ef
Revision ID: 0x00c7
ROM Revision: 113-C980AA-921
VBIOS Version: 113-C9810A1P-017
EFI Driver Version: 01.00.921
Metal Family: Supported, Metal GPUFamily macOS 2
Displays:
iMac:
Display Type: Built-In Retina LCD
Resolution: 4096 x 2304 Retina
Framebuffer Depth: 30-Bit Color (ARGB2101010)
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: Yes
Connection Type: Internal
EV2416W:
Resolution: 1920 x 1200 (WUXGA - Widescreen Ultra eXtended Graphics Array)
UI Looks like: 1920 x 1200 @ 59.00Hz
Framebuffer Depth: 30-Bit Color (ARGB2101010)
Display Serial Number: 75632044
Mirror: Off
Online: Yes
Rotation: Supported
Automatically Adjust Brightness: Yes
Connection Type: Thunderbolt/DisplayPort
Locale: (None, 'UTF-8')
PyQt5 5.15.2, Qt 5.15.2
Installed Packages:
alabaster: 0.7.12
appdirs: 1.4.4
appnope: 0.1.2
Babel: 2.9.1
backcall: 0.2.0
blockdiag: 2.0.1
certifi: 2020.12.5
cftime: 1.5.0
chardet: 3.0.4
ChimeraX-AddCharge: 1.0.1
ChimeraX-AddH: 2.1.6
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.1
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.13.2
ChimeraX-AtomicLibrary: 3.1.3
ChimeraX-AtomSearch: 2.0
ChimeraX-AtomSearchLibrary: 1.0
ChimeraX-AxesPlanes: 2.0
ChimeraX-BasicActions: 1.1
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 1.1
ChimeraX-BondRot: 2.0
ChimeraX-BugReporter: 1.0
ChimeraX-BuildStructure: 2.5.2
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.1
ChimeraX-ButtonPanel: 1.0
ChimeraX-CageBuilder: 1.0
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.1
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.1
ChimeraX-ColorActions: 1.0
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.2.1
ChimeraX-CommandLine: 1.1.4
ChimeraX-ConnectStructure: 2.0
ChimeraX-Contacts: 1.0
ChimeraX-Core: 1.2.5
ChimeraX-CoreFormats: 1.0
ChimeraX-coulombic: 1.1.1
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0
ChimeraX-DataFormats: 1.1
ChimeraX-Dicom: 1.0
ChimeraX-DistMonitor: 1.1.3
ChimeraX-DistUI: 1.0
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0
ChimeraX-FunctionKey: 1.0
ChimeraX-Geometry: 1.1
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.0
ChimeraX-Hbonds: 2.1
ChimeraX-Help: 1.1
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.0
ChimeraX-ImageFormats: 1.1
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-Label: 1.0
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.2
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.1
ChimeraX-Map: 1.0.2
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.0
ChimeraX-Markers: 1.0
ChimeraX-Mask: 1.0
ChimeraX-MatchMaker: 1.2.1
ChimeraX-MDcrds: 2.2
ChimeraX-MedicalToolbar: 1.0.1
ChimeraX-Meeting: 1.0
ChimeraX-MLP: 1.1
ChimeraX-mmCIF: 2.3
ChimeraX-MMTF: 2.1
ChimeraX-Modeller: 1.0.1
ChimeraX-ModelPanel: 1.0.1
ChimeraX-ModelSeries: 1.0
ChimeraX-Mol2: 2.0
ChimeraX-Morph: 1.0
ChimeraX-MouseModes: 1.1
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0.1
ChimeraX-OpenCommand: 1.5
ChimeraX-PDB: 2.4.1
ChimeraX-PDBBio: 1.0
ChimeraX-PDBLibrary: 1.0.1
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.0.1
ChimeraX-PubChem: 2.0.1
ChimeraX-ReadPbonds: 1.0
ChimeraX-Registration: 1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-ResidueFit: 1.0
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.4
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SeqView: 2.3
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0
ChimeraX-Shortcuts: 1.0
ChimeraX-ShowAttr: 1.0
ChimeraX-ShowSequences: 1.0
ChimeraX-SideView: 1.0
ChimeraX-Smiles: 2.0.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.3.1
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-Struts: 1.0
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0
ChimeraX-SwapRes: 2.1
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.0.1
ChimeraX-ToolshedUtils: 1.2
ChimeraX-Tug: 1.0
ChimeraX-UI: 1.7.6
ChimeraX-uniprot: 2.1
ChimeraX-UnitCell: 1.0
ChimeraX-ViewDockX: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0
ChimeraX-WebServices: 1.0
ChimeraX-Zone: 1.0
colorama: 0.4.3
comtypes: 1.1.7
cxservices: 1.0
cycler: 0.10.0
Cython: 0.29.21
decorator: 5.0.9
distlib: 0.3.1
docutils: 0.16
filelock: 3.0.12
funcparserlib: 0.3.6
grako: 3.16.5
h5py: 2.10.0
html2text: 2020.1.16
idna: 2.10
ihm: 0.17
imagecodecs: 2020.5.30
imagesize: 1.2.0
ipykernel: 5.3.4
ipython: 7.18.1
ipython-genutils: 0.2.0
jedi: 0.17.2
Jinja2: 2.11.2
jupyter-client: 6.1.7
jupyter-core: 4.7.1
kiwisolver: 1.3.1
line-profiler: 2.1.2
lxml: 4.6.2
lz4: 3.1.0
MarkupSafe: 2.0.1
matplotlib: 3.3.2
matplotlib-inline: 0.1.2
msgpack: 1.0.0
netCDF4: 1.5.4
networkx: 2.5
numexpr: 2.7.3
numpy: 1.19.2
numpydoc: 1.1.0
openvr: 1.14.1501
packaging: 20.9
ParmEd: 3.2.0
parso: 0.7.1
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 7.2.0
pip: 21.0.1
pkginfo: 1.5.0.1
prompt-toolkit: 3.0.18
psutil: 5.7.2
ptyprocess: 0.7.0
pycollada: 0.7.1
pydicom: 2.0.0
Pygments: 2.7.1
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 2.4.7
PyQt5-commercial: 5.15.2
PyQt5-sip: 12.8.1
PyQtWebEngine-commercial: 5.15.2
python-dateutil: 2.8.1
pytz: 2021.1
pyzmq: 22.0.3
qtconsole: 4.7.7
QtPy: 1.9.0
RandomWords: 0.3.0
requests: 2.24.0
scipy: 1.5.2
setuptools: 50.3.2
sfftk-rw: 0.6.7.dev1
six: 1.15.0
snowballstemmer: 2.1.0
sortedcontainers: 2.2.2
Sphinx: 3.2.1
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 2.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 2.0.0
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.5
suds-jurko: 0.6
tables: 3.6.1
tifffile: 2020.9.3
tinyarray: 1.2.3
tornado: 6.1
traitlets: 5.0.5
urllib3: 1.25.11
wcwidth: 0.2.5
webcolors: 1.11.1
wheel: 0.36.0
wheel-filename: 1.3.0
Change History (2)
comment:1 by , 4 years ago
| Component: | Unassigned → Structure Comparison |
|---|---|
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → assigned |
| Summary: | ChimeraX bug report submission → Crash creating morph interpolation |
comment:2 by , 4 years ago
| Resolution: | → can't reproduce |
|---|---|
| Status: | assigned → closed |
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User was running morph command in ChimeraX 1.2.5. Python stack trace says it crashed on line
which is a pure python call, and the routine being called is pure Python that does some numpy array calculation. C++ stack trace indicates some C function is being called but no clues as to what function.