The following bug report has been submitted:
Platform: Darwin-19.6.0-x86_64-i386-64bit
ChimeraX Version: 1.1.1 (2020-10-07 08:32:49 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Process: ChimeraX [85403]
Path: /Volumes/VOLUME/*/ChimeraX-1.1.1.app/Contents/MacOS/ChimeraX
Identifier: edu.ucsf.cgl.ChimeraX
Version: 1.1.1 (1.1.1.0)
Code Type: X86-64 (Native)
Parent Process: ??? [1]
Responsible: ChimeraX [85403]
User ID: 503
Date/Time: 2021-10-27 16:19:33.083 +0100
OS Version: Mac OS X 10.15.7 (19H524)
Report Version: 12
Bridge OS Version: 5.2 (18P4347)
Anonymous UUID: FCFA0AB3-D891-88F0-E208-0D3808ECA2D4
Sleep/Wake UUID: 74925C81-92A4-4705-B511-8713288CF806
Time Awake Since Boot: 360000 seconds
Time Since Wake: 1000 seconds
System Integrity Protection: enabled
Notes: Translocated Process
Crashed Thread: 0 CrBrowserMain Dispatch queue: com.apple.main-thread
Exception Type: EXC_CRASH (SIGABRT)
Exception Codes: 0x0000000000000000, 0x0000000000000000
Exception Note: EXC_CORPSE_NOTIFY
Application Specific Information:
abort() called
Application Specific Signatures:
Graphics hardware encountered an error and was reset: 0x00000013
Thread 0 Crashed:: CrBrowserMain Dispatch queue: com.apple.main-thread
0 libsystem_kernel.dylib 0x00007fff68b5333a __pthread_kill + 10
1 libsystem_pthread.dylib 0x00007fff68c0fe60 pthread_kill + 430
2 libsystem_c.dylib 0x00007fff68a6a93e raise + 26
3 libsystem_platform.dylib 0x00007fff68c045fd _sigtramp + 29
4 ??? 000000000000000000 0 + 0
5 libsystem_c.dylib 0x00007fff68ada808 abort + 120
6 libGPUSupportMercury.dylib 0x00007fff4fde40a5 gpusGenerateCrashLog.cold.1 + 95
7 libGPUSupportMercury.dylib 0x00007fff4fddb18f gpusGenerateCrashLog + 89
8 com.apple.driver.AppleIntelICLGraphicsGLDriver 0x00007fff25d6eb38 gpusKillClientExt + 9
9 libGPUSupportMercury.dylib 0x00007fff4fddc6a1 gpusSubmitDataBuffers + 490
10 com.apple.driver.AppleIntelICLGraphicsGLDriver 0x00007fff24fdc290 IntelCommandBuffer::getNew(GLDContextRec*) + 48
11 com.apple.driver.AppleIntelICLGraphicsGLDriver 0x00007fff24fdc07c intelSubmitCommands + 171
12 com.apple.AppKit 0x00007fff2c79abb9 -[NSIOAccelSurface frontBuffer] + 1708
13 com.apple.AppKit 0x00007fff2c799888 -[NSCGLSurface flushRect:] + 966
14 com.apple.AppKit 0x00007fff2c799444 NSCGLSurfaceFlush + 214
15 GLEngine 0x00007fff3964092a glSwap_Exec + 186
16 com.apple.opengl 0x00007fff39622473 CGLFlushDrawable + 59
17 com.apple.AppKit 0x00007fff2c11f75a -[NSOpenGLContext flushBuffer] + 20
18 libqcocoa.dylib 0x00000001187b4d3d 0x11875e000 + 355645
19 QtGui 0x000000010e272a6c QOpenGLContext::swapBuffers(QSurface*) + 412
20 QtGui 0x000000010e4e2f5d QPlatformBackingStore::composeAndFlush(QWindow*, QRegion const&, QPoint const&, QPlatformTextureList*, bool) + 4173
21 QtWidgets 0x000000010dc5e7b3 0x10dc46000 + 100275
22 QtWidgets 0x000000010dc5eb0e 0x10dc46000 + 101134
23 QtWidgets 0x000000010dc640b7 0x10dc46000 + 123063
24 QtWidgets 0x000000010dc9286d QWidget::event(QEvent*) + 1645
25 QtWidgets 0x000000010dda3bf5 QMainWindow::event(QEvent*) + 277
26 QtWidgets.so 0x000000010d76ae70 sipQMainWindow::event(QEvent*) + 192
27 QtWidgets 0x000000010dc5667d QApplicationPrivate::notify_helper(QObject*, QEvent*) + 269
28 QtWidgets 0x000000010dc57a82 QApplication::notify(QObject*, QEvent*) + 594
29 QtWidgets.so 0x000000010d8163ca sipQApplication::notify(QObject*, QEvent*) + 234
30 QtCore 0x000000010e942324 QCoreApplication::notifyInternal2(QObject*, QEvent*) + 212
31 QtCore 0x000000010e94355e QCoreApplicationPrivate::sendPostedEvents(QObject*, int, QThreadData*) + 878
32 libqcocoa.dylib 0x00000001187948f9 0x11875e000 + 223481
33 libqcocoa.dylib 0x0000000118795068 0x11875e000 + 225384
34 com.apple.CoreFoundation 0x00007fff2eb04d52 __CFRUNLOOP_IS_CALLING_OUT_TO_A_SOURCE0_PERFORM_FUNCTION__ + 17
35 com.apple.CoreFoundation 0x00007fff2eb04cf1 __CFRunLoopDoSource0 + 103
36 com.apple.CoreFoundation 0x00007fff2eb04b0b __CFRunLoopDoSources0 + 209
37 com.apple.CoreFoundation 0x00007fff2eb0383a __CFRunLoopRun + 927
38 com.apple.CoreFoundation 0x00007fff2eb02e3e CFRunLoopRunSpecific + 462
39 com.apple.HIToolbox 0x00007fff2d72fabd RunCurrentEventLoopInMode + 292
40 com.apple.HIToolbox 0x00007fff2d72f6f4 ReceiveNextEventCommon + 359
41 com.apple.HIToolbox 0x00007fff2d72f579 _BlockUntilNextEventMatchingListInModeWithFilter + 64
42 com.apple.AppKit 0x00007fff2bd75039 _DPSNextEvent + 883
43 com.apple.AppKit 0x00007fff2bd73880 -[NSApplication(NSEvent) _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 1352
44 com.apple.AppKit 0x00007fff2bd6558e -[NSApplication run] + 658
45 libqcocoa.dylib 0x0000000118793de3 0x11875e000 + 220643
46 QtCore 0x000000010e93d93f QEventLoop::exec(QFlags) + 431
47 QtCore 0x000000010e942932 QCoreApplication::exec() + 130
48 QtWidgets.so 0x000000010d9057d2 meth_QApplication_exec_(_object*, _object*) + 82
49 org.python.python 0x0000000100c19382 _PyMethodDef_RawFastCallKeywords + 226
50 org.python.python 0x0000000100c188b9 _PyCFunction_FastCallKeywords + 41
51 org.python.python 0x0000000100cedb60 call_function + 656
52 org.python.python 0x0000000100cea817 _PyEval_EvalFrameDefault + 26567
53 org.python.python 0x0000000100c18d61 function_code_fastcall + 177
54 org.python.python 0x0000000100cedbd4 call_function + 772
55 org.python.python 0x0000000100cea817 _PyEval_EvalFrameDefault + 26567
56 org.python.python 0x0000000100ceea2c _PyEval_EvalCodeWithName + 3276
57 org.python.python 0x0000000100c18879 _PyFunction_FastCallKeywords + 217
58 org.python.python 0x0000000100cedbd4 call_function + 772
59 org.python.python 0x0000000100cea8ae _PyEval_EvalFrameDefault + 26718
60 org.python.python 0x0000000100ceea2c _PyEval_EvalCodeWithName + 3276
61 org.python.python 0x0000000100ce3fb0 PyEval_EvalCode + 48
62 org.python.python 0x0000000100ce1547 builtin_exec + 583
63 org.python.python 0x0000000100c1952d _PyMethodDef_RawFastCallKeywords + 653
64 org.python.python 0x0000000100c188b9 _PyCFunction_FastCallKeywords + 41
65 org.python.python 0x0000000100cedb60 call_function + 656
66 org.python.python 0x0000000100cea8ae _PyEval_EvalFrameDefault + 26718
67 org.python.python 0x0000000100ceea2c _PyEval_EvalCodeWithName + 3276
68 org.python.python 0x0000000100c18879 _PyFunction_FastCallKeywords + 217
69 org.python.python 0x0000000100cedbd4 call_function + 772
70 org.python.python 0x0000000100cea8ae _PyEval_EvalFrameDefault + 26718
71 org.python.python 0x0000000100ceea2c _PyEval_EvalCodeWithName + 3276
72 org.python.python 0x0000000100c18377 _PyFunction_FastCallDict + 455
73 org.python.python 0x0000000100d48af3 pymain_run_module + 147
74 org.python.python 0x0000000100d47bdc pymain_main + 5900
75 org.python.python 0x0000000100d464c3 Py_Main + 51
76 edu.ucsf.cgl.ChimeraX 0x0000000100be8dc8 main + 120
77 libdyld.dylib 0x00007fff68a0bcc9 start + 1
Thread 1:
0 libsystem_kernel.dylib 0x00007fff68b4f882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff68c10425 _pthread_cond_wait + 698
2 libopenblasp-r0.3.7.dylib 0x0000000104b7ec3b blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff68c10109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff68c0bb8b thread_start + 15
Thread 2:
0 libsystem_kernel.dylib 0x00007fff68b4f882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff68c10425 _pthread_cond_wait + 698
2 libopenblasp-r0.3.7.dylib 0x0000000104b7ec3b blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff68c10109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff68c0bb8b thread_start + 15
Thread 3:
0 libsystem_kernel.dylib 0x00007fff68b4f882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff68c10425 _pthread_cond_wait + 698
2 libopenblasp-r0.3.7.dylib 0x0000000104b7ec3b blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff68c10109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff68c0bb8b thread_start + 15
Thread 4:: com.apple.NSEventThread
0 libsystem_kernel.dylib 0x00007fff68b4cdfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff68b4d170 mach_msg + 60
2 com.apple.CoreFoundation 0x00007fff2eb04ef5 __CFRunLoopServiceMachPort + 247
3 com.apple.CoreFoundation 0x00007fff2eb039c2 __CFRunLoopRun + 1319
4 com.apple.CoreFoundation 0x00007fff2eb02e3e CFRunLoopRunSpecific + 462
5 com.apple.AppKit 0x00007fff2bf16954 _NSEventThread + 132
6 libsystem_pthread.dylib 0x00007fff68c10109 _pthread_start + 148
7 libsystem_pthread.dylib 0x00007fff68c0bb8b thread_start + 15
Thread 5:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff68b4cdfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff68b4d170 mach_msg + 60
2 QtWebEngineCore 0x000000011330532d 0x111163000 + 35267373
3 QtWebEngineCore 0x000000011330522f 0x111163000 + 35267119
4 QtWebEngineCore 0x00000001132b905d 0x111163000 + 34955357
5 QtWebEngineCore 0x00000001132e2085 0x111163000 + 35123333
6 QtWebEngineCore 0x00000001133349bc 0x111163000 + 35461564
7 QtWebEngineCore 0x0000000113374717 0x111163000 + 35723031
8 libsystem_pthread.dylib 0x00007fff68c10109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff68c0bb8b thread_start + 15
Thread 6:: DnsConfigService
0 libsystem_kernel.dylib 0x00007fff68b51766 kevent + 10
1 QtWebEngineCore 0x00000001135c69a9 0x111163000 + 38156713
2 QtWebEngineCore 0x00000001135c3cbd 0x111163000 + 38145213
3 QtWebEngineCore 0x000000011337acdc 0x111163000 + 35749084
4 QtWebEngineCore 0x00000001132e2085 0x111163000 + 35123333
5 QtWebEngineCore 0x00000001133349bc 0x111163000 + 35461564
6 QtWebEngineCore 0x0000000113374717 0x111163000 + 35723031
7 libsystem_pthread.dylib 0x00007fff68c10109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff68c0bb8b thread_start + 15
Thread 7:: TaskSchedulerServiceThread
0 libsystem_kernel.dylib 0x00007fff68b51766 kevent + 10
1 QtWebEngineCore 0x00000001135c69a9 0x111163000 + 38156713
2 QtWebEngineCore 0x00000001135c3cbd 0x111163000 + 38145213
3 QtWebEngineCore 0x000000011337acc4 0x111163000 + 35749060
4 QtWebEngineCore 0x00000001132e2085 0x111163000 + 35123333
5 QtWebEngineCore 0x0000000113323a74 0x111163000 + 35392116
6 QtWebEngineCore 0x00000001133349bc 0x111163000 + 35461564
7 QtWebEngineCore 0x0000000113374717 0x111163000 + 35723031
8 libsystem_pthread.dylib 0x00007fff68c10109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff68c0bb8b thread_start + 15
Thread 8:: TaskSchedulerForegroundBlockingWorker
0 libsystem_kernel.dylib 0x00007fff68b4cdfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff68b4d170 mach_msg + 60
2 QtWebEngineCore 0x000000011330532d 0x111163000 + 35267373
3 QtWebEngineCore 0x0000000113305421 0x111163000 + 35267617
4 QtWebEngineCore 0x000000011331cd28 0x111163000 + 35364136
5 QtWebEngineCore 0x000000011331d65b 0x111163000 + 35366491
6 QtWebEngineCore 0x000000011331d2c4 0x111163000 + 35365572
7 QtWebEngineCore 0x0000000113374717 0x111163000 + 35723031
8 libsystem_pthread.dylib 0x00007fff68c10109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff68c0bb8b thread_start + 15
Thread 9:: TaskSchedulerBackgroundWorker
0 libsystem_kernel.dylib 0x00007fff68b4cdfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff68b4d170 mach_msg + 60
2 QtWebEngineCore 0x000000011330532d 0x111163000 + 35267373
3 QtWebEngineCore 0x0000000113305421 0x111163000 + 35267617
4 QtWebEngineCore 0x000000011331cd28 0x111163000 + 35364136
5 QtWebEngineCore 0x000000011331d65b 0x111163000 + 35366491
6 QtWebEngineCore 0x000000011331d234 0x111163000 + 35365428
7 QtWebEngineCore 0x0000000113374717 0x111163000 + 35723031
8 libsystem_pthread.dylib 0x00007fff68c10109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff68c0bb8b thread_start + 15
Thread 10:: Chrome_IOThread
0 libsystem_kernel.dylib 0x00007fff68b51766 kevent + 10
1 QtWebEngineCore 0x00000001135c69a9 0x111163000 + 38156713
2 QtWebEngineCore 0x00000001135c3cbd 0x111163000 + 38145213
3 QtWebEngineCore 0x000000011337acc4 0x111163000 + 35749060
4 QtWebEngineCore 0x00000001132e2085 0x111163000 + 35123333
5 QtWebEngineCore 0x0000000112c50fe4 0x111163000 + 28237796
6 QtWebEngineCore 0x00000001133349bc 0x111163000 + 35461564
7 QtWebEngineCore 0x0000000113374717 0x111163000 + 35723031
8 libsystem_pthread.dylib 0x00007fff68c10109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff68c0bb8b thread_start + 15
Thread 11:: TaskSchedulerSingleThreadSharedBackgroundBlocking0
0 libsystem_kernel.dylib 0x00007fff68b4cdfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff68b4d170 mach_msg + 60
2 QtWebEngineCore 0x000000011330532d 0x111163000 + 35267373
3 QtWebEngineCore 0x000000011330522f 0x111163000 + 35267119
4 QtWebEngineCore 0x000000011331cd1a 0x111163000 + 35364122
5 QtWebEngineCore 0x000000011331d3bf 0x111163000 + 35365823
6 QtWebEngineCore 0x000000011331d264 0x111163000 + 35365476
7 QtWebEngineCore 0x0000000113374717 0x111163000 + 35723031
8 libsystem_pthread.dylib 0x00007fff68c10109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff68c0bb8b thread_start + 15
Thread 12:: CompositorTileWorker1/56323
0 libsystem_kernel.dylib 0x00007fff68b4f882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff68c10425 _pthread_cond_wait + 698
2 QtWebEngineCore 0x0000000113372fa8 0x111163000 + 35717032
3 QtWebEngineCore 0x00000001142f94c8 0x111163000 + 51995848
4 QtWebEngineCore 0x0000000113333694 0x111163000 + 35456660
5 QtWebEngineCore 0x0000000113374717 0x111163000 + 35723031
6 libsystem_pthread.dylib 0x00007fff68c10109 _pthread_start + 148
7 libsystem_pthread.dylib 0x00007fff68c0bb8b thread_start + 15
Thread 13:: AudioThread
0 libsystem_kernel.dylib 0x00007fff68b4cdfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff68b4d170 mach_msg + 60
2 QtWebEngineCore 0x000000011330532d 0x111163000 + 35267373
3 QtWebEngineCore 0x000000011330522f 0x111163000 + 35267119
4 QtWebEngineCore 0x00000001132b905d 0x111163000 + 34955357
5 QtWebEngineCore 0x00000001132e2085 0x111163000 + 35123333
6 QtWebEngineCore 0x00000001133349bc 0x111163000 + 35461564
7 QtWebEngineCore 0x0000000113374717 0x111163000 + 35723031
8 libsystem_pthread.dylib 0x00007fff68c10109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff68c0bb8b thread_start + 15
Thread 14:: Chrome_InProcGpuThread
0 libsystem_kernel.dylib 0x00007fff68b4cdfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff68b4d170 mach_msg + 60
2 QtWebEngineCore 0x000000011330532d 0x111163000 + 35267373
3 QtWebEngineCore 0x00000001132b9052 0x111163000 + 34955346
4 QtWebEngineCore 0x00000001132e2085 0x111163000 + 35123333
5 QtWebEngineCore 0x00000001133349bc 0x111163000 + 35461564
6 QtWebEngineCore 0x0000000113374717 0x111163000 + 35723031
7 libsystem_pthread.dylib 0x00007fff68c10109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff68c0bb8b thread_start + 15
Thread 15:: Chrome_ChildIOThread
0 libsystem_kernel.dylib 0x00007fff68b51766 kevent + 10
1 QtWebEngineCore 0x00000001135c69a9 0x111163000 + 38156713
2 QtWebEngineCore 0x00000001135c3cbd 0x111163000 + 38145213
3 QtWebEngineCore 0x000000011337acdc 0x111163000 + 35749084
4 QtWebEngineCore 0x00000001132e2085 0x111163000 + 35123333
5 QtWebEngineCore 0x00000001133349bc 0x111163000 + 35461564
6 QtWebEngineCore 0x0000000113374717 0x111163000 + 35723031
7 libsystem_pthread.dylib 0x00007fff68c10109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff68c0bb8b thread_start + 15
Thread 16:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff68b4cdfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff68b4d170 mach_msg + 60
2 QtWebEngineCore 0x000000011330532d 0x111163000 + 35267373
3 QtWebEngineCore 0x000000011330522f 0x111163000 + 35267119
4 QtWebEngineCore 0x00000001132b905d 0x111163000 + 34955357
5 QtWebEngineCore 0x00000001132e2085 0x111163000 + 35123333
6 QtWebEngineCore 0x00000001133349bc 0x111163000 + 35461564
7 QtWebEngineCore 0x0000000113374717 0x111163000 + 35723031
8 libsystem_pthread.dylib 0x00007fff68c10109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff68c0bb8b thread_start + 15
Thread 17:: TaskSchedulerSingleThreadForegroundBlocking1
0 libsystem_kernel.dylib 0x00007fff68b4cdfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff68b4d170 mach_msg + 60
2 QtWebEngineCore 0x000000011330532d 0x111163000 + 35267373
3 QtWebEngineCore 0x000000011330522f 0x111163000 + 35267119
4 QtWebEngineCore 0x000000011331cd1a 0x111163000 + 35364122
5 QtWebEngineCore 0x000000011331d65b 0x111163000 + 35366491
6 QtWebEngineCore 0x000000011331d324 0x111163000 + 35365668
7 QtWebEngineCore 0x0000000113374717 0x111163000 + 35723031
8 libsystem_pthread.dylib 0x00007fff68c10109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff68c0bb8b thread_start + 15
Thread 18:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff68b4cdfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff68b4d170 mach_msg + 60
2 QtWebEngineCore 0x000000011330532d 0x111163000 + 35267373
3 QtWebEngineCore 0x000000011330522f 0x111163000 + 35267119
4 QtWebEngineCore 0x00000001132b905d 0x111163000 + 34955357
5 QtWebEngineCore 0x00000001132e2085 0x111163000 + 35123333
6 QtWebEngineCore 0x00000001133349bc 0x111163000 + 35461564
7 QtWebEngineCore 0x0000000113374717 0x111163000 + 35723031
8 libsystem_pthread.dylib 0x00007fff68c10109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff68c0bb8b thread_start + 15
Thread 19:: TaskSchedulerBackgroundBlockingWorker
0 libsystem_kernel.dylib 0x00007fff68b4cdfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff68b4d170 mach_msg + 60
2 QtWebEngineCore 0x000000011330532d 0x111163000 + 35267373
3 QtWebEngineCore 0x0000000113305421 0x111163000 + 35267617
4 QtWebEngineCore 0x000000011331cd28 0x111163000 + 35364136
5 QtWebEngineCore 0x000000011331d65b 0x111163000 + 35366491
6 QtWebEngineCore 0x000000011331d234 0x111163000 + 35365428
7 QtWebEngineCore 0x0000000113374717 0x111163000 + 35723031
8 libsystem_pthread.dylib 0x00007fff68c10109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff68c0bb8b thread_start + 15
Thread 20:: TaskSchedulerForegroundWorker
0 libsystem_kernel.dylib 0x00007fff68b4cdfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff68b4d170 mach_msg + 60
2 QtWebEngineCore 0x000000011330532d 0x111163000 + 35267373
3 QtWebEngineCore 0x0000000113305421 0x111163000 + 35267617
4 QtWebEngineCore 0x000000011331cd28 0x111163000 + 35364136
5 QtWebEngineCore 0x000000011331d65b 0x111163000 + 35366491
6 QtWebEngineCore 0x000000011331d2c4 0x111163000 + 35365572
7 QtWebEngineCore 0x0000000113374717 0x111163000 + 35723031
8 libsystem_pthread.dylib 0x00007fff68c10109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff68c0bb8b thread_start + 15
Thread 21:
0 libsystem_pthread.dylib 0x00007fff68c0bb68 start_wqthread + 0
Thread 22:
0 libsystem_pthread.dylib 0x00007fff68c0bb68 start_wqthread + 0
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x000000010480ddc0 rcx: 0x00007fc731f77418 rdx: 0x0000000000000000
rdi: 0x0000000000000307 rsi: 0x0000000000000006 rbp: 0x00007fc731f77440 rsp: 0x00007fc731f77418
r8: 0x00007fc731f77f48 r9: 0x606cfc45ed36af72 r10: 0x000000010480ddc0 r11: 0x0000000000000246
r12: 0x0000000000000307 r13: 0x00007fc7377cd3c8 r14: 0x0000000000000006 r15: 0x0000000000000016
rip: 0x00007fff68b5333a rfl: 0x0000000000000246 cr2: 0x0000000100df17c8
Logical CPU: 0
Error Code: 0x02000148
Trap Number: 133
Binary Images:
0x100be8000 - 0x100be8ff3 +edu.ucsf.cgl.ChimeraX (1.1.1 - 1.1.1.0) /var/folders/*/ChimeraX-1.1.1.app/Contents/MacOS/ChimeraX
0x100bf5000 - 0x100df0fff +org.python.python (3.7.8, [c] 2001-2019 Python Software Foundation. - 3.7.8) /var/folders/*/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/Python
0x101167000 - 0x101168ff7 +_heapq.cpython-37m-darwin.so (0) /var/folders/*/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_heapq.cpython-37m-darwin.so
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0x7fff67dab000 - 0x7fff67e05ff8 libusrtcp.dylib (1880.120.4) /usr/lib/libusrtcp.dylib
0x7fff67e06000 - 0x7fff67e09ffb libutil.dylib (57) /usr/lib/libutil.dylib
0x7fff67e0a000 - 0x7fff67e17ff7 libxar.1.dylib (425.2) /usr/lib/libxar.1.dylib
0x7fff67e1d000 - 0x7fff67efffff libxml2.2.dylib (33.8) /usr/lib/libxml2.2.dylib
0x7fff67f03000 - 0x7fff67f2bfff libxslt.1.dylib (16.10) /usr/lib/libxslt.1.dylib
0x7fff67f2c000 - 0x7fff67f3eff3 libz.1.dylib (76) /usr/lib/libz.1.dylib
0x7fff687ed000 - 0x7fff687f2ff3 libcache.dylib (83) /usr/lib/system/libcache.dylib
0x7fff687f3000 - 0x7fff687fefff libcommonCrypto.dylib (60165.120.1) /usr/lib/system/libcommonCrypto.dylib
0x7fff687ff000 - 0x7fff68806fff libcompiler_rt.dylib (101.2) /usr/lib/system/libcompiler_rt.dylib
0x7fff68807000 - 0x7fff68810ff7 libcopyfile.dylib (166.40.1) /usr/lib/system/libcopyfile.dylib
0x7fff68811000 - 0x7fff688a3fdb libcorecrypto.dylib (866.140.1) /usr/lib/system/libcorecrypto.dylib
0x7fff689b0000 - 0x7fff689f0ff0 libdispatch.dylib (1173.100.2) /usr/lib/system/libdispatch.dylib
0x7fff689f1000 - 0x7fff68a27fff libdyld.dylib (750.6) /usr/lib/system/libdyld.dylib
0x7fff68a28000 - 0x7fff68a28ffb libkeymgr.dylib (30) /usr/lib/system/libkeymgr.dylib
0x7fff68a29000 - 0x7fff68a35ff3 libkxld.dylib (6153.141.16) /usr/lib/system/libkxld.dylib
0x7fff68a36000 - 0x7fff68a36ff7 liblaunch.dylib (1738.140.2) /usr/lib/system/liblaunch.dylib
0x7fff68a37000 - 0x7fff68a3cff7 libmacho.dylib (959.0.1) /usr/lib/system/libmacho.dylib
0x7fff68a3d000 - 0x7fff68a3fff3 libquarantine.dylib (110.40.3) /usr/lib/system/libquarantine.dylib
0x7fff68a40000 - 0x7fff68a41ff7 libremovefile.dylib (48) /usr/lib/system/libremovefile.dylib
0x7fff68a42000 - 0x7fff68a59ff3 libsystem_asl.dylib (377.60.2) /usr/lib/system/libsystem_asl.dylib
0x7fff68a5a000 - 0x7fff68a5aff7 libsystem_blocks.dylib (74) /usr/lib/system/libsystem_blocks.dylib
0x7fff68a5b000 - 0x7fff68ae2fff libsystem_c.dylib (1353.100.2) /usr/lib/system/libsystem_c.dylib
0x7fff68ae3000 - 0x7fff68ae6ffb libsystem_configuration.dylib (1061.141.1) /usr/lib/system/libsystem_configuration.dylib
0x7fff68ae7000 - 0x7fff68aeafff libsystem_coreservices.dylib (114) /usr/lib/system/libsystem_coreservices.dylib
0x7fff68aeb000 - 0x7fff68af3fff libsystem_darwin.dylib (1353.100.2) /usr/lib/system/libsystem_darwin.dylib
0x7fff68af4000 - 0x7fff68afbfff libsystem_dnssd.dylib (1096.100.3) /usr/lib/system/libsystem_dnssd.dylib
0x7fff68afc000 - 0x7fff68afdffb libsystem_featureflags.dylib (17) /usr/lib/system/libsystem_featureflags.dylib
0x7fff68afe000 - 0x7fff68b4bff7 libsystem_info.dylib (538) /usr/lib/system/libsystem_info.dylib
0x7fff68b4c000 - 0x7fff68b78ff7 libsystem_kernel.dylib (6153.141.16) /usr/lib/system/libsystem_kernel.dylib
0x7fff68b79000 - 0x7fff68bc0fff libsystem_m.dylib (3178) /usr/lib/system/libsystem_m.dylib
0x7fff68bc1000 - 0x7fff68be8fff libsystem_malloc.dylib (283.100.6) /usr/lib/system/libsystem_malloc.dylib
0x7fff68be9000 - 0x7fff68bf6ffb libsystem_networkextension.dylib (1095.140.2) /usr/lib/system/libsystem_networkextension.dylib
0x7fff68bf7000 - 0x7fff68c00ff7 libsystem_notify.dylib (241.100.2) /usr/lib/system/libsystem_notify.dylib
0x7fff68c01000 - 0x7fff68c09fef libsystem_platform.dylib (220.100.1) /usr/lib/system/libsystem_platform.dylib
0x7fff68c0a000 - 0x7fff68c14fff libsystem_pthread.dylib (416.100.3) /usr/lib/system/libsystem_pthread.dylib
0x7fff68c15000 - 0x7fff68c19ff3 libsystem_sandbox.dylib (1217.141.2) /usr/lib/system/libsystem_sandbox.dylib
0x7fff68c1a000 - 0x7fff68c1cfff libsystem_secinit.dylib (62.100.2) /usr/lib/system/libsystem_secinit.dylib
0x7fff68c1d000 - 0x7fff68c24ffb libsystem_symptoms.dylib (1238.120.2) /usr/lib/system/libsystem_symptoms.dylib
0x7fff68c25000 - 0x7fff68c3bff2 libsystem_trace.dylib (1147.120.1) /usr/lib/system/libsystem_trace.dylib
0x7fff68c3d000 - 0x7fff68c42ff7 libunwind.dylib (35.4) /usr/lib/system/libunwind.dylib
0x7fff68c43000 - 0x7fff68c78ffe libxpc.dylib (1738.140.2) /usr/lib/system/libxpc.dylib
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 1901
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 1481876
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=923.1M resident=0K(0%) swapped_out_or_unallocated=923.1M(100%)
Writable regions: Total=2.2G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=2.2G(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 896K 7
Activity Tracing 256K 1
CG backing stores 1328K 4
CG image 1628K 54
CoreAnimation 5568K 95
CoreGraphics 8K 1
CoreImage 48K 8
CoreUI image data 5072K 54
Foundation 24K 2
Kernel Alloc Once 8K 1
MALLOC 1.6G 1384
MALLOC guard page 32K 7
MALLOC_LARGE (reserved) 384K 1 reserved VM address space (unallocated)
MALLOC_NANO (reserved) 128.0M 1 reserved VM address space (unallocated)
OpenGL GLSL 512K 6
PROTECTED_MEMORY 4K 1
STACK GUARD 88K 22
Stack 139.2M 23
Stack Guard 56.0M 1
VM_ALLOCATE 292.0M 510
VM_ALLOCATE (reserved) 32.0M 1 reserved VM address space (unallocated)
__DATA 51.4M 547
__DATA_CONST 76K 4
__FONT_DATA 4K 1
__GLSLBUILTINS 5176K 1
__LINKEDIT 413.4M 145
__OBJC_RO 32.3M 1
__OBJC_RW 1908K 2
__TEXT 509.7M 514
__UNICODE 564K 1
mapped file 125.9M 67
shared memory 668K 20
=========== ======= =======
TOTAL 3.4G 3487
TOTAL, minus reserved VM space 3.2G 3487
Log:
UCSF ChimeraX version: 1.1.1 (2020-10-07)
© 2016-2020 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open "/Volumes/NO NAME 1/SMC56em/run_it025_class003.mrc"
Opened run_it025_class003.mrc, grid size 64,64,64, pixel 10, shown at level
0.0235, step 1, values float32
OpenGL version: 4.1 INTEL-14.7.12
OpenGL renderer: Intel(R) Iris(TM) Plus Graphics OpenGL Engine
OpenGL vendor: Intel Inc.Hardware:
Hardware Overview:
Model Name: MacBook Pro
Model Identifier: MacBookPro16,2
Processor Name: Quad-Core Intel Core i7
Processor Speed: 2.3 GHz
Number of Processors: 1
Total Number of Cores: 4
L2 Cache (per Core): 512 KB
L3 Cache: 8 MB
Hyper-Threading Technology: Enabled
Memory: 16 GB
Boot ROM Version: 1554.80.3.0.0 (iBridge: 18.16.14347.0.0,0)
Software:
System Software Overview:
System Version: macOS 10.15.7 (19H524)
Kernel Version: Darwin 19.6.0
Time since boot: 28 days 6:52
Graphics/Displays:
Intel Iris Plus Graphics:
Chipset Model: Intel Iris Plus Graphics
Type: GPU
Bus: Built-In
VRAM (Dynamic, Max): 1536 MB
Vendor: Intel
Device ID: 0x8a53
Revision ID: 0x0007
Metal: Supported, feature set macOS GPUFamily2 v1
Displays:
Color LCD:
Display Type: Built-In Retina LCD
Resolution: 2560 x 1600 Retina
Framebuffer Depth: 30-Bit Color (ARGB2101010)
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: No
Connection Type: Internal
DELL U2419H:
Resolution: 1920 x 1080 (1080p FHD - Full High Definition)
UI Looks like: 1920 x 1080 @ 60 Hz
Framebuffer Depth: 30-Bit Color (ARGB2101010)
Display Serial Number: BQ1B123
Mirror: Off
Online: Yes
Rotation: Supported
Automatically Adjust Brightness: No
Connection Type: Thunderbolt/DisplayPort
PyQt version: 5.12.3
Compiled Qt version: 5.12.4
Runtime Qt version: 5.12.9
Installed Packages:
alabaster: 0.7.12
appdirs: 1.4.4
appnope: 0.1.0
Babel: 2.8.0
backcall: 0.2.0
blockdiag: 2.0.1
certifi: 2020.6.20
chardet: 3.0.4
ChimeraX-AddH: 2.1.1
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.1
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.6.1
ChimeraX-AtomSearch: 2.0
ChimeraX-AxesPlanes: 2.0
ChimeraX-BasicActions: 1.1
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 1.0.1
ChimeraX-BondRot: 2.0
ChimeraX-BugReporter: 1.0
ChimeraX-BuildStructure: 2.0
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.0
ChimeraX-ButtonPanel: 1.0
ChimeraX-CageBuilder: 1.0
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.1
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.0
ChimeraX-ColorActions: 1.0
ChimeraX-ColorGlobe: 1.0
ChimeraX-CommandLine: 1.1.3
ChimeraX-ConnectStructure: 2.0
ChimeraX-Contacts: 1.0
ChimeraX-Core: 1.1.1
ChimeraX-CoreFormats: 1.0
ChimeraX-coulombic: 1.0.1
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-DataFormats: 1.0
ChimeraX-Dicom: 1.0
ChimeraX-DistMonitor: 1.1
ChimeraX-DistUI: 1.0
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0
ChimeraX-FunctionKey: 1.0
ChimeraX-Geometry: 1.1
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.0
ChimeraX-Hbonds: 2.0
ChimeraX-Help: 1.0
ChimeraX-HKCage: 1.0
ChimeraX-IHM: 1.0
ChimeraX-ImageFormats: 1.0
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0
ChimeraX-Label: 1.0
ChimeraX-ListInfo: 1.0
ChimeraX-Log: 1.1.1
ChimeraX-LookingGlass: 1.1
ChimeraX-Map: 1.0.1
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.0
ChimeraX-Markers: 1.0
ChimeraX-Mask: 1.0
ChimeraX-MatchMaker: 1.1
ChimeraX-MDcrds: 2.0
ChimeraX-MedicalToolbar: 1.0.1
ChimeraX-Meeting: 1.0
ChimeraX-MLP: 1.0
ChimeraX-mmCIF: 2.2
ChimeraX-MMTF: 2.0
ChimeraX-Modeller: 1.0
ChimeraX-ModelPanel: 1.0
ChimeraX-ModelSeries: 1.0
ChimeraX-Mol2: 2.0
ChimeraX-Morph: 1.0
ChimeraX-MouseModes: 1.0
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0
ChimeraX-OpenCommand: 1.2.1
ChimeraX-PDB: 2.1
ChimeraX-PDBBio: 1.0
ChimeraX-PickBlobs: 1.0
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.0
ChimeraX-PubChem: 2.0
ChimeraX-Read-Pbonds: 1.0
ChimeraX-Registration: 1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-ResidueFit: 1.0
ChimeraX-RestServer: 1.0
ChimeraX-RMF: 0.9
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.2
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SeqView: 2.2
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0
ChimeraX-Shortcuts: 1.0
ChimeraX-ShowAttr: 1.0
ChimeraX-ShowSequences: 1.0
ChimeraX-SideView: 1.0
ChimeraX-Smiles: 2.0
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.0.4
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-Struts: 1.0
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0
ChimeraX-SwapRes: 2.0
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.0
ChimeraX-ToolshedUtils: 1.0
ChimeraX-Tug: 1.0
ChimeraX-UI: 1.2.3
ChimeraX-uniprot: 2.0
ChimeraX-ViewDockX: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0
ChimeraX-WebServices: 1.0
ChimeraX-Zone: 1.0
colorama: 0.4.3
comtypes: 1.1.7
cxservices: 1.0
cycler: 0.10.0
Cython: 0.29.20
decorator: 4.4.2
distlib: 0.3.1
docutils: 0.16
filelock: 3.0.12
funcparserlib: 0.3.6
grako: 3.16.5
h5py: 2.10.0
html2text: 2020.1.16
idna: 2.10
ihm: 0.16
imagecodecs: 2020.5.30
imagecodecs-lite: 2020.1.31
imagesize: 1.2.0
ipykernel: 5.3.0
ipython: 7.15.0
ipython-genutils: 0.2.0
jedi: 0.17.2
Jinja2: 2.11.2
jupyter-client: 6.1.3
jupyter-core: 4.6.3
kiwisolver: 1.2.0
line-profiler: 2.1.2
lxml: 4.5.1
MarkupSafe: 1.1.1
matplotlib: 3.2.1
msgpack: 1.0.0
netifaces: 0.10.9
networkx: 2.4
numexpr: 2.7.1
numpy: 1.18.5
numpydoc: 1.0.0
openvr: 1.12.501
packaging: 20.4
parso: 0.7.1
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 7.1.2
pip: 20.2.2
pkginfo: 1.5.0.1
prompt-toolkit: 3.0.7
psutil: 5.7.0
ptyprocess: 0.6.0
pycollada: 0.7.1
pydicom: 2.0.0
Pygments: 2.6.1
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 2.4.7
PyQt5-commercial: 5.12.3
PyQt5-sip: 4.19.19
PyQtWebEngine-commercial: 5.12.1
python-dateutil: 2.8.1
pytz: 2020.1
pyzmq: 19.0.2
qtconsole: 4.7.4
QtPy: 1.9.0
RandomWords: 0.3.0
requests: 2.24.0
scipy: 1.4.1
setuptools: 49.4.0
sfftk-rw: 0.6.6.dev0
six: 1.15.0
snowballstemmer: 2.0.0
sortedcontainers: 2.2.2
Sphinx: 3.1.1
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 2.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 1.0.3
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.4
suds-jurko: 0.6
tables: 3.6.1
tifffile: 2020.6.3
tinyarray: 1.2.2
tornado: 6.0.4
traitlets: 5.0.4
urllib3: 1.25.10
wcwidth: 0.2.5
webcolors: 1.11.1
wheel: 0.34.2
![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Apple graphics driver crash.