![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 4 years ago
Closed 4 years ago
#5397 closed defect (duplicate)
Crash in Qt on exit
| Reported by: | Owned by: | Eric Pettersen | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Window Toolkit | Version: | |
| Keywords: | Cc: | Tom Goddard | |
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: macOS-10.16-x86_64-i386-64bit
ChimeraX Version: 1.2 (2021-04-27 05:33:30 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Process: ChimeraX [4237]
Path: /Users/USER/Desktop/ChimeraX-1.2.app/Contents/MacOS/ChimeraX
Identifier: edu.ucsf.cgl.ChimeraX
Version: 1.2.0 (1.2.0.0)
Code Type: X86-64 (Native)
Parent Process: ??? [1]
Responsible: ChimeraX [4237]
User ID: 501
Date/Time: 2021-10-11 19:16:06.973 +0200
OS Version: macOS 11.5.2 (20G95)
Report Version: 12
Bridge OS Version: 5.5 (18P4759a)
Anonymous UUID: D4426E2B-00AA-4457-D8A7-B40067EABB3C
Sleep/Wake UUID: 281BE05C-2AF0-4807-A6C8-CDE7F6D37611
Time Awake Since Boot: 22000 seconds
Time Since Wake: 880 seconds
System Integrity Protection: enabled
Crashed Thread: 0 CrBrowserMain Dispatch queue: com.apple.main-thread
Exception Type: EXC_BAD_ACCESS (SIGSEGV)
Exception Codes: KERN_INVALID_ADDRESS at 0x00007ff716101d90
Exception Note: EXC_CORPSE_NOTIFY
VM Regions Near 0x7ff716101d90:
MALLOC_LARGE 7ff7160af000-7ff7160ef000 [ 256K] rw-/rwx SM=PRV
-->
MALLOC_LARGE 7ff716118000-7ff716138000 [ 128K] rw-/rwx SM=PRV
Thread 0 Crashed:: CrBrowserMain Dispatch queue: com.apple.main-thread
0 libsystem_kernel.dylib 0x00007fff2034f92e __pthread_kill + 10
1 libsystem_pthread.dylib 0x00007fff2037e5bd pthread_kill + 263
2 libsystem_c.dylib 0x00007fff20262bd5 raise + 26
3 libsystem_platform.dylib 0x00007fff203c3d7d _sigtramp + 29
4 ??? 000000000000000000 0 + 0
5 QtCore.abi3.so 0x0000000110e5a28c cleanup_on_exit(_object*, _object*) + 12
6 org.python.python 0x0000000107bb77f6 cfunction_vectorcall_NOARGS + 214
7 org.python.python 0x0000000107b7adad PyVectorcall_Call + 109
8 org.python.python 0x0000000107ce4b91 atexit_callfuncs + 113
9 org.python.python 0x0000000107c8abcf Py_FinalizeEx + 79
10 org.python.python 0x0000000107cac67b Py_RunMain + 1659
11 org.python.python 0x0000000107cacbdf pymain_main + 223
12 org.python.python 0x0000000107cacaeb Py_Main + 43
13 edu.ucsf.cgl.ChimeraX 0x0000000107b4ddc8 main + 120
14 libdyld.dylib 0x00007fff20399f3d start + 1
Thread 1:
0 libsystem_kernel.dylib 0x00007fff2034bcde __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff2037ee49 _pthread_cond_wait + 1298
2 libopenblas.0.dylib 0x0000000108c6f27b blas_thread_server + 507
3 libsystem_pthread.dylib 0x00007fff2037e8fc _pthread_start + 224
4 libsystem_pthread.dylib 0x00007fff2037a443 thread_start + 15
Thread 2:: ThreadPoolServiceThread
0 libsystem_kernel.dylib 0x00007fff203521d2 kevent64 + 10
1 QtWebEngineCore 0x0000000117956e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x0000000117956cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x00000001178df62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x00000001178a37cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x00000001178eaa94 base::internal::ServiceThread::Run(base::RunLoop*) + 20
6 QtWebEngineCore 0x00000001178fea7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x0000000117947e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff2037e8fc _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff2037a443 thread_start + 15
Thread 3:: ThreadPoolBackgroundWorker
0 libsystem_kernel.dylib 0x00007fff203492ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2034962c mach_msg + 60
2 QtWebEngineCore 0x000000011794c492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001178f4778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x00000001178f5150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x00000001178f4c44 base::internal::WorkerThread::RunBackgroundPooledWorker() + 20
6 QtWebEngineCore 0x0000000117947e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff2037e8fc _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff2037a443 thread_start + 15
Thread 4:: Chrome_IOThread
0 libsystem_kernel.dylib 0x00007fff203521d2 kevent64 + 10
1 QtWebEngineCore 0x0000000117956e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x0000000117956cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x00000001178df62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x00000001178a37cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x000000011b823f06 content::BrowserProcessSubThread::IOThreadRun(base::RunLoop*) + 102
6 QtWebEngineCore 0x00000001178fea7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x0000000117947e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff2037e8fc _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff2037a443 thread_start + 15
Thread 5:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff203492ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2034962c mach_msg + 60
2 QtWebEngineCore 0x000000011794c492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011794c2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001178741db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x00000001178df62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x00000001178a37cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x00000001178fea7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x0000000117947e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff2037e8fc _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff2037a443 thread_start + 15
Thread 6:: CompositorTileWorker1
0 libsystem_kernel.dylib 0x00007fff2034bcde __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff2037ee49 _pthread_cond_wait + 1298
2 QtWebEngineCore 0x0000000117943e18 base::ConditionVariable::Wait() + 104
3 QtWebEngineCore 0x0000000118bfb5f8 non-virtual thunk to cc::SingleThreadTaskGraphRunner::Run() + 56
4 QtWebEngineCore 0x0000000117947e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
5 libsystem_pthread.dylib 0x00007fff2037e8fc _pthread_start + 224
6 libsystem_pthread.dylib 0x00007fff2037a443 thread_start + 15
Thread 7:: Chrome_InProcGpuThread
0 libsystem_kernel.dylib 0x00007fff203492ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2034962c mach_msg + 60
2 QtWebEngineCore 0x000000011794c492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011787420f base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 223
4 QtWebEngineCore 0x00000001178df62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
5 QtWebEngineCore 0x00000001178a37cb base::RunLoop::Run() + 395
6 QtWebEngineCore 0x00000001178fea7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x0000000117947e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff2037e8fc _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff2037a443 thread_start + 15
Thread 8:: Chrome_ChildIOThread
0 libsystem_kernel.dylib 0x00007fff203521d2 kevent64 + 10
1 QtWebEngineCore 0x0000000117956e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x0000000117956cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x00000001178df62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x00000001178a37cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x00000001178fea7d base::Thread::ThreadMain() + 413
6 QtWebEngineCore 0x0000000117947e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff2037e8fc _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff2037a443 thread_start + 15
Thread 9:: VizCompositorThread
0 libsystem_kernel.dylib 0x00007fff203492ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2034962c mach_msg + 60
2 QtWebEngineCore 0x000000011794c492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011787420f base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 223
4 QtWebEngineCore 0x00000001178df62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
5 QtWebEngineCore 0x00000001178a37cb base::RunLoop::Run() + 395
6 QtWebEngineCore 0x00000001178fea7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x0000000117947e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff2037e8fc _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff2037a443 thread_start + 15
Thread 10:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff203492ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2034962c mach_msg + 60
2 QtWebEngineCore 0x000000011794c492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011794c2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001178741db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x00000001178df62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x00000001178a37cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x00000001178fea7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x0000000117947e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff2037e8fc _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff2037a443 thread_start + 15
Thread 11:: ThreadPoolSingleThreadForegroundBlocking0
0 libsystem_kernel.dylib 0x00007fff203492ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2034962c mach_msg + 60
2 QtWebEngineCore 0x000000011794c492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011794c2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001178f476a base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 42
5 QtWebEngineCore 0x00000001178f5150 base::internal::WorkerThread::RunWorker() + 1024
6 QtWebEngineCore 0x00000001178f4d34 base::internal::WorkerThread::RunDedicatedWorker() + 20
7 QtWebEngineCore 0x0000000117947e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff2037e8fc _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff2037a443 thread_start + 15
Thread 12:: MemoryInfra
0 libsystem_kernel.dylib 0x00007fff203492ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2034962c mach_msg + 60
2 QtWebEngineCore 0x000000011794c492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011794c2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001178741db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x00000001178df62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x00000001178a37cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x00000001178fea7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x0000000117947e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff2037e8fc _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff2037a443 thread_start + 15
Thread 13:: com.apple.NSEventThread
0 libsystem_kernel.dylib 0x00007fff203492ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2034962c mach_msg + 60
2 com.apple.CoreFoundation 0x00007fff20477b2f __CFRunLoopServiceMachPort + 316
3 com.apple.CoreFoundation 0x00007fff2047620f __CFRunLoopRun + 1328
4 com.apple.CoreFoundation 0x00007fff2047561c CFRunLoopRunSpecific + 563
5 com.apple.AppKit 0x00007fff22e0323a _NSEventThread + 124
6 libsystem_pthread.dylib 0x00007fff2037e8fc _pthread_start + 224
7 libsystem_pthread.dylib 0x00007fff2037a443 thread_start + 15
Thread 14:: ThreadPoolSingleThreadSharedBackgroundBlocking1
0 libsystem_kernel.dylib 0x00007fff203492ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2034962c mach_msg + 60
2 QtWebEngineCore 0x000000011794c492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011794c2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001178f476a base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 42
5 QtWebEngineCore 0x00000001178f4e3d base::internal::WorkerThread::RunWorker() + 237
6 QtWebEngineCore 0x00000001178f4c74 base::internal::WorkerThread::RunBackgroundSharedWorker() + 20
7 QtWebEngineCore 0x0000000117947e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff2037e8fc _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff2037a443 thread_start + 15
Thread 15:
0 libsystem_kernel.dylib 0x00007fff2034bcde __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff2037ee49 _pthread_cond_wait + 1298
2 libopenblas.0.dylib 0x00000001611722eb blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff2037e8fc _pthread_start + 224
4 libsystem_pthread.dylib 0x00007fff2037a443 thread_start + 15
Thread 16:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff203492ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2034962c mach_msg + 60
2 QtWebEngineCore 0x000000011794c492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001178f4778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x00000001178f5150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x00000001178f4cd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x0000000117947e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff2037e8fc _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff2037a443 thread_start + 15
Thread 17:
0 libsystem_pthread.dylib 0x00007fff2037a420 start_wqthread + 0
Thread 18:
0 libsystem_pthread.dylib 0x00007fff2037a420 start_wqthread + 0
Thread 19:
0 libsystem_pthread.dylib 0x00007fff2037a420 start_wqthread + 0
Thread 20:
0 libsystem_pthread.dylib 0x00007fff2037a420 start_wqthread + 0
Thread 21:
0 libsystem_pthread.dylib 0x00007fff2037a420 start_wqthread + 0
Thread 22:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff203492ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2034962c mach_msg + 60
2 QtWebEngineCore 0x000000011794c492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001178f4778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x00000001178f5150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x00000001178f4cd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x0000000117947e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff2037e8fc _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff2037a443 thread_start + 15
Thread 23:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff203492ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2034962c mach_msg + 60
2 QtWebEngineCore 0x000000011794c492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001178f4778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x00000001178f5150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x00000001178f4cd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x0000000117947e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff2037e8fc _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff2037a443 thread_start + 15
Thread 24:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff203492ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2034962c mach_msg + 60
2 QtWebEngineCore 0x000000011794c492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001178f4778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x00000001178f5150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x00000001178f4cd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x0000000117947e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff2037e8fc _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff2037a443 thread_start + 15
Thread 25:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff203492ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff2034962c mach_msg + 60
2 QtWebEngineCore 0x000000011794c492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001178f4778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x00000001178f5150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x00000001178f4cd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x0000000117947e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff2037e8fc _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff2037a443 thread_start + 15
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x000000011410ae00 rcx: 0x00007ff728155418 rdx: 0x0000000000000000
rdi: 0x0000000000000103 rsi: 0x000000000000000b rbp: 0x00007ff728155440 rsp: 0x00007ff728155418
r8: 0x00007ff728155f48 r9: 0x1417da8589dc27fc r10: 0x000000011410ae00 r11: 0x0000000000000246
r12: 0x0000000000000103 r13: 0x00000000000005d9 r14: 0x000000000000000b r15: 0x0000000000000016
rip: 0x00007fff2034f92e rfl: 0x0000000000000246 cr2: 0x00007ff7281548c0
Logical CPU: 0
Error Code: 0x02000148
Trap Number: 133
Thread 0 instruction stream:
00 00 00 00 55 48 89 e5-ba 01 00 00 00 5d e9 31 ....UH.......].1
7e 00 00 90 55 48 89 e5-41 57 41 56 41 55 41 54 ~...UH..AWAVAUAT
53 50 48 8b 05 a3 d7 00-00 48 85 c0 74 6b 49 89 SPH......H..tkI.
f6 49 89 ff 4c 8b 25 a9-d7 00 00 45 31 ed 49 83 .I..L.%....E1.I.
3c 24 00 75 22 66 2e 0f-1f 84 00 00 00 00 00 0f /Users/USER/Desktop/ChimeraX-1.2.app/Contents/MacOS/ChimeraX
0x107b5a000 - 0x107d90fff +org.python.python (3.8.8, [c] 2001-2019 Python Software Foundation. - 3.8.8) /Users/USER/Desktop/ChimeraX-1.2.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/Python
0x107eeb000 - 0x107eedfff +_heapq.cpython-38-darwin.so (0) /Users/USER/Desktop/ChimeraX-1.2.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_heapq.cpython-38-darwin.so
0x107ef5000 - 0x107efafff +zlib.cpython-38-darwin.so (0) /Users/USER/Desktop/ChimeraX-1.2.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/zlib.cpython-38-darwin.so
0x107f04000 - 0x107f06fff +_bz2.cpython-38-darwin.so (0) /Users/USER/Desktop/ChimeraX-1.2.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_bz2.cpython-38-darwin.so
0x107f0f000 - 0x107f40fff +_lzma.cpython-38-darwin.so (0) /Users/USER/Desktop/ChimeraX-1.2.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_lzma.cpython-38-darwin.so
0x107f4f000 - 0x107f50fff +grp.cpython-38-darwin.so (0) /Users/USER/Desktop/ChimeraX-1.2.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/grp.cpython-38-darwin.so
0x107f58000 - 0x107f60fff +math.cpython-38-darwin.so (0) /Users/USER/Desktop/ChimeraX-1.2.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/math.cpython-38-darwin.so
0x107f6c000 - 0x107f6dfff +_bisect.cpython-38-darwin.so (0) /Users/USER/Desktop/ChimeraX-1.2.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_bisect.cpython-38-darwin.so
0x107f75000 - 0x107f79fff +_sha512.cpython-38-darwin.so (0) /Users/USER/Desktop/ChimeraX-1.2.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_sha512.cpython-38-darwin.so
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0x7fff515b9000 - 0x7fff51658fff com.apple.Symbolication (12.5 - 64544.70.1) /System/Library/PrivateFrameworks/Symbolication.framework/Versions/A/Symbolication
0x7fff51848000 - 0x7fff5184bfff libpmsample.dylib (227.140.1) /usr/lib/libpmsample.dylib
0x7fff53ee0000 - 0x7fff53f16fff com.apple.ReplayKit (1.0 - 1) /System/Library/Frameworks/ReplayKit.framework/Versions/A/ReplayKit
0x7fff5550d000 - 0x7fff55510fff com.apple.ForceFeedback (1.0.6 - 1.0.6) /System/Library/Frameworks/ForceFeedback.framework/Versions/A/ForceFeedback
0x7fff63dd0000 - 0x7fff64dbffff com.apple.driver.AppleIntelICLGraphicsGLDriver (16.5.2 - 16.0.5) /System/Library/Extensions/AppleIntelICLGraphicsGLDriver.bundle/Contents/MacOS/AppleIntelICLGraphicsGLDriver
0x7fff65278000 - 0x7fff657a9fff com.apple.driver.AppleIntelICLGraphicsMTLDriver (16.5.2 - 16.0.5) /System/Library/Extensions/AppleIntelICLGraphicsMTLDriver.bundle/Contents/MacOS/AppleIntelICLGraphicsMTLDriver
0x7fff69609000 - 0x7fff6960dfff libmetal_timestamp.dylib (31001.192.1) /System/Library/PrivateFrameworks/GPUCompiler.framework/Versions/31001/Libraries/libmetal_timestamp.dylib
0x7fff6ba54000 - 0x7fff6ba5afff libCoreFSCache.dylib (200.10) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libCoreFSCache.dylib
0x7fff6ba5b000 - 0x7fff6ba5ffff libCoreVMClient.dylib (200.10) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libCoreVMClient.dylib
0x7fff6ba60000 - 0x7fff6ba6ffff com.apple.opengl (18.5.9 - 18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/OpenGL
0x7fff6ba70000 - 0x7fff6ba72fff libCVMSPluginSupport.dylib (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libCVMSPluginSupport.dylib
0x7fff6ba73000 - 0x7fff6ba7bfff libGFXShared.dylib (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGFXShared.dylib
0x7fff6ba7c000 - 0x7fff6baaffff libGLImage.dylib (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLImage.dylib
0x7fff6bab0000 - 0x7fff6baecfff libGLU.dylib (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLU.dylib
0x7fff6baed000 - 0x7fff6bc80fff libGLProgrammability.dylib (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLProgrammability.dylib
0x7fff6bc81000 - 0x7fff6bc8bfff libGL.dylib (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib
0x7fff6bc8c000 - 0x7fff6be09fff GLEngine (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Resources/GLEngine.bundle/GLEngine
0x7fff6be0a000 - 0x7fff6be32fff GLRendererFloat (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Resources/GLRendererFloat.bundle/GLRendererFloat
0x7fff6d0cb000 - 0x7fff6d123fff com.apple.opencl (4.6 - 4.6) /System/Library/Frameworks/OpenCL.framework/Versions/A/OpenCL
0x7fff6e1cd000 - 0x7fff6e1d4fff com.apple.agl (3.3.4 - AGL-3.3.3) /System/Library/Frameworks/AGL.framework/Versions/A/AGL
0x7fff6e1d5000 - 0x7fff6e2bcfff com.apple.audio.AVFAudio (1.0 - 477.88) /System/Library/Frameworks/AVFAudio.framework/Versions/A/AVFAudio
0x7fff6f83a000 - 0x7fff6f84cfff com.apple.CMImaging (1.0 - 82.6) /System/Library/PrivateFrameworks/CMImaging.framework/Versions/A/CMImaging
0x7fff73b4e000 - 0x7fff73b59fff com.apple.SymptomAnalytics (1.0 - 1431.140.1) /System/Library/PrivateFrameworks/Symptoms.framework/Frameworks/SymptomAnalytics.framework/Versions/A/SymptomAnalytics
0x7fff73d6f000 - 0x7fff73d87fff com.apple.SymptomPresentationFeed (1.0 - 1431.140.1) /System/Library/PrivateFrameworks/Symptoms.framework/Frameworks/SymptomPresentationFeed.framework/Versions/A/SymptomPresentationFeed
0x7fff778ff000 - 0x7fff77906fff libRosetta.dylib (203.58) /usr/lib/libRosetta.dylib
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=1.2G resident=0K(0%) swapped_out_or_unallocated=1.2G(100%)
Writable regions: Total=1.2G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=1.2G(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 512K 4
Activity Tracing 256K 1
CG backing stores 3240K 6
CG image 800K 33
CoreAnimation 908K 62
CoreGraphics 12K 2
CoreUI image data 5136K 40
Foundation 40K 2
Kernel Alloc Once 1364K 4
MALLOC 612.2M 732
MALLOC guard page 32K 8
MALLOC_LARGE (reserved) 384K 1 reserved VM address space (unallocated)
MALLOC_NANO (reserved) 256.0M 1 reserved VM address space (unallocated)
Mach message 8K 1
OpenGL GLSL 384K 4
STACK GUARD 100K 25
Stack 148.2M 26
Stack Guard 56.0M 1
VM_ALLOCATE 184.5M 137
VM_ALLOCATE (reserved) 32.0M 1 reserved VM address space (unallocated)
__DATA 32.4M 659
__DATA_CONST 24.2M 270
__DATA_DIRTY 1270K 176
__FONT_DATA 4K 1
__GLSLBUILTINS 5176K 1
__LINKEDIT 600.7M 191
__OBJC_RO 70.2M 1
__OBJC_RW 2496K 2
__TEXT 659.2M 620
__UNICODE 588K 1
mapped file 693.2M 95
shared memory 908K 21
=========== ======= =======
TOTAL 3.3G 3129
TOTAL, minus reserved VM space 3.0G 3129
System Profile:
Network Service: Wi-Fi, AirPort, en0
bridge_os_version: Bridge OS 5.5 (18P4759a)
Boot Volume File System Type: apfs
bridge_model: iBridge2,15
Memory Module: BANK 0/ChannelA-DIMM0, 4 GB, LPDDR4X, 3733 MHz, Micron, MT53E512M64D4NW-053
Memory Module: BANK 2/ChannelB-DIMM0, 4 GB, LPDDR4X, 3733 MHz, Micron, MT53E512M64D4NW-053
USB Device: USB 3.1 Bus
USB Device: USB 3.1 Bus
USB Device: Apple T2 Bus
USB Device: Touch Bar Backlight
USB Device: Apple Internal Keyboard / Trackpad
USB Device: Headset
USB Device: Ambient Light Sensor
USB Device: FaceTime HD Camera (Built-in)
USB Device: Apple T2 Controller
Thunderbolt Bus: MacBook Air, Apple Inc., 85.0
Model: MacBookAir9,1, BootROM 1554.140.20.0.0 (iBridge: 18.16.14759.0.1,0), 2 processors, Dual-Core Intel Core i3, 1,1 GHz, 8 GB, SMC
Graphics: kHW_IntelIrisPlusGraphicsItem, Intel Iris Plus Graphics, spdisplays_builtin
AirPort: spairport_wireless_card_type_airport_extreme, wl0: Jul 7 2021 03:22:32 version 16.50.21.0.3.6.102 FWID 01-d1a61353
Bluetooth: Version 8.0.5d7, 3 services, 27 devices, 1 incoming serial ports
Log:
UCSF ChimeraX version: 1.2 (2021-04-27)
© 2016-2021 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 INTEL-16.5.2
OpenGL renderer: Intel(R) Iris(TM) Plus Graphics OpenGL Engine (1x6x8 (fused) LP
OpenGL vendor: Intel Inc.Hardware:
Hardware Overview:
Model Name: MacBook Air
Model Identifier: MacBookAir9,1
Processor Name: Dual-Core Intel Core i3
Processor Speed: 1.1 GHz
Number of Processors: 1
Total Number of Cores: 2
L2 Cache (per Core): 512 KB
L3 Cache: 4 MB
Hyper-Threading Technology: Enabled
Memory: 8 GB
System Firmware Version: 1554.140.20.0.0 (iBridge: 18.16.14759.0.1,0)
Software:
System Software Overview:
System Version: macOS 11.5.2 (20G95)
Kernel Version: Darwin 20.6.0
Time since boot: 2 days 2:46
Graphics/Displays:
Intel Iris Plus Graphics:
Chipset Model: Intel Iris Plus Graphics
Type: GPU
Bus: Built-In
VRAM (Dynamic, Max): 1536 MB
Vendor: Intel
Device ID: 0x8a5c
Revision ID: 0x0007
Metal Family: Supported, Metal GPUFamily macOS 2
Displays:
Color LCD:
Display Type: Built-In Retina LCD
Resolution: 2560 x 1600 Retina
Framebuffer Depth: 30-Bit Color (ARGB2101010)
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: Yes
Connection Type: Internal
Locale: (None, 'UTF-8')
PyQt5 5.15.2, Qt 5.15.2
Installed Packages:
alabaster: 0.7.12
appdirs: 1.4.4
appnope: 0.1.2
Babel: 2.9.0
backcall: 0.2.0
blockdiag: 2.0.1
certifi: 2020.12.5
cftime: 1.4.1
chardet: 3.0.4
ChimeraX-AddCharge: 1.0
ChimeraX-AddH: 2.1.6
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.1
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.13.3
ChimeraX-AtomicLibrary: 3.1.2
ChimeraX-AtomSearch: 2.0
ChimeraX-AtomSearchLibrary: 1.0
ChimeraX-AxesPlanes: 2.0
ChimeraX-BasicActions: 1.1
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 1.1
ChimeraX-BondRot: 2.0
ChimeraX-BugReporter: 1.0
ChimeraX-BuildStructure: 2.5.2
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.1
ChimeraX-ButtonPanel: 1.0
ChimeraX-CageBuilder: 1.0
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.1
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.1
ChimeraX-ColorActions: 1.0
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.2.1
ChimeraX-CommandLine: 1.1.3
ChimeraX-ConnectStructure: 2.0
ChimeraX-Contacts: 1.0
ChimeraX-Core: 1.2
ChimeraX-CoreFormats: 1.0
ChimeraX-coulombic: 1.1.1
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0
ChimeraX-DataFormats: 1.1
ChimeraX-Dicom: 1.0
ChimeraX-DistMonitor: 1.1.1
ChimeraX-DistUI: 1.0
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0
ChimeraX-FunctionKey: 1.0
ChimeraX-Geometry: 1.1
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.0
ChimeraX-Hbonds: 2.1
ChimeraX-Help: 1.1
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.0
ChimeraX-ImageFormats: 1.1
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-Label: 1.0
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.2
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.1
ChimeraX-Map: 1.0.2
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.0
ChimeraX-Markers: 1.0
ChimeraX-Mask: 1.0
ChimeraX-MatchMaker: 1.2
ChimeraX-MDcrds: 2.2
ChimeraX-MedicalToolbar: 1.0.1
ChimeraX-Meeting: 1.0
ChimeraX-MLP: 1.1
ChimeraX-mmCIF: 2.3
ChimeraX-MMTF: 2.1
ChimeraX-Modeller: 1.0.1
ChimeraX-ModelPanel: 1.0.1
ChimeraX-ModelSeries: 1.0
ChimeraX-Mol2: 2.0
ChimeraX-Morph: 1.0
ChimeraX-MouseModes: 1.1
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0.1
ChimeraX-OpenCommand: 1.5
ChimeraX-PDB: 2.4.1
ChimeraX-PDBBio: 1.0
ChimeraX-PDBLibrary: 1.0
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.0.1
ChimeraX-PubChem: 2.0.1
ChimeraX-ReadPbonds: 1.0
ChimeraX-Registration: 1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-ResidueFit: 1.0
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.4
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SeqView: 2.3
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0
ChimeraX-Shortcuts: 1.0
ChimeraX-ShowAttr: 1.0
ChimeraX-ShowSequences: 1.0
ChimeraX-SideView: 1.0
ChimeraX-Smiles: 2.0.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.3.1
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-Struts: 1.0
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0
ChimeraX-SwapRes: 2.1
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.0.1
ChimeraX-ToolshedUtils: 1.2
ChimeraX-Tug: 1.0
ChimeraX-UI: 1.7.3
ChimeraX-uniprot: 2.1
ChimeraX-UnitCell: 1.0
ChimeraX-ViewDockX: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0
ChimeraX-WebServices: 1.0
ChimeraX-Zone: 1.0
colorama: 0.4.3
comtypes: 1.1.7
cxservices: 1.0
cycler: 0.10.0
Cython: 0.29.21
decorator: 5.0.7
distlib: 0.3.1
docutils: 0.16
filelock: 3.0.12
funcparserlib: 0.3.6
grako: 3.16.5
h5py: 2.10.0
html2text: 2020.1.16
idna: 2.10
ihm: 0.17
imagecodecs: 2020.5.30
imagesize: 1.2.0
ipykernel: 5.3.4
ipython: 7.18.1
ipython-genutils: 0.2.0
jedi: 0.17.2
Jinja2: 2.11.2
jupyter-client: 6.1.7
jupyter-core: 4.7.1
kiwisolver: 1.3.1
line-profiler: 2.1.2
lxml: 4.6.2
lz4: 3.1.0
MarkupSafe: 1.1.1
matplotlib: 3.3.2
msgpack: 1.0.0
netCDF4: 1.5.4
networkx: 2.5
numexpr: 2.7.3
numpy: 1.19.2
numpydoc: 1.1.0
openvr: 1.14.1501
packaging: 20.9
ParmEd: 3.2.0
parso: 0.7.1
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 7.2.0
pip: 21.0.1
pkginfo: 1.5.0.1
prompt-toolkit: 3.0.18
psutil: 5.7.2
ptyprocess: 0.7.0
pycollada: 0.7.1
pydicom: 2.0.0
Pygments: 2.7.1
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 2.4.7
PyQt5-commercial: 5.15.2
PyQt5-sip: 12.8.1
PyQtWebEngine-commercial: 5.15.2
python-dateutil: 2.8.1
pytz: 2021.1
pyzmq: 22.0.3
qtconsole: 4.7.7
QtPy: 1.9.0
RandomWords: 0.3.0
requests: 2.24.0
scipy: 1.5.2
setuptools: 50.3.2
sfftk-rw: 0.6.7.dev1
six: 1.15.0
snowballstemmer: 2.1.0
sortedcontainers: 2.2.2
Sphinx: 3.2.1
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 2.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 1.0.3
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.4
suds-jurko: 0.6
tables: 3.6.1
tifffile: 2020.9.3
tinyarray: 1.2.3
tornado: 6.1
traitlets: 5.0.5
urllib3: 1.25.11
wcwidth: 0.2.5
webcolors: 1.11.1
wheel: 0.36.0
wheel-filename: 1.3.0
Change History (2)
comment:1 by , 4 years ago
| Cc: | added |
|---|---|
| Component: | Unassigned → Window Toolkit |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → accepted |
| Summary: | ChimeraX bug report submission → Crash in Qt on exit |
comment:2 by , 4 years ago
| Resolution: | → duplicate |
|---|---|
| Status: | accepted → closed |
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