![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 4 years ago
Last modified 4 years ago
#5382 feedback defect
Crash removing destroyed tool/dock widget
| Reported by: | Owned by: | Eric Pettersen | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | UI | Version: | |
| Keywords: | Cc: | Tom Goddard | |
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: macOS-10.15.1-x86_64-i386-64bit
ChimeraX Version: 1.2.5 (2021-05-24 04:13:57 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Process: ChimeraX [865]
Path: /Volumes/VOLUME/*/ChimeraX-1.2.5.app/Contents/MacOS/ChimeraX
Identifier: ChimeraX
Version: ???
Code Type: X86-64 (Native)
Parent Process: ??? [1]
Responsible: ChimeraX [865]
User ID: 501
Date/Time: 2021-10-05 13:25:45.413 -0400
OS Version: Mac OS X 10.15.1 (19B88)
Report Version: 12
Anonymous UUID: 299A81BA-FCEC-2544-0B63-D5953C7D7032
Sleep/Wake UUID: 8CA55317-BE84-4023-BD97-2A9571906F5C
Time Awake Since Boot: 12000 seconds
Time Since Wake: 1000 seconds
System Integrity Protection: enabled
Notes: Translocated Process
Crashed Thread: 0 CrBrowserMain Dispatch queue: com.apple.main-thread
Exception Type: EXC_BAD_ACCESS (SIGSEGV)
Exception Codes: KERN_INVALID_ADDRESS at 0x00005689215e17e8
Exception Note: EXC_CORPSE_NOTIFY
VM Regions Near 0x5689215e17e8:
VM_ALLOCATE 000000016395f000-0000000164acd000 [ 17.4M] rw-/rwx SM=PRV
-->
MALLOC_NANO 0000600000000000-0000600008000000 [128.0M] rw-/rwx SM=PRV
Application Specific Information:
Calling windowShouldClose: on the delegate for the QNSPanel 0x7f80f6652150
Thread 0 Crashed:: CrBrowserMain Dispatch queue: com.apple.main-thread
0 libsystem_kernel.dylib 0x00007fff696b849a __pthread_kill + 10
1 libsystem_pthread.dylib 0x00007fff697756cb pthread_kill + 384
2 libsystem_c.dylib 0x00007fff695d03a2 raise + 26
3 libsystem_platform.dylib 0x00007fff6976ab1d _sigtramp + 29
4 ??? 000000000000000000 0 + 0
5 QtWidgets 0x0000000111835741 QMainWindow::removeDockWidget(QDockWidget*) + 33
6 QtWidgets.abi3.so 0x000000011130f29f meth_QMainWindow_removeDockWidget(_object*, _object*) + 95
7 org.python.python 0x00000001062f40c2 cfunction_call_varargs + 290
8 org.python.python 0x00000001062f3a85 _PyObject_MakeTpCall + 373
9 org.python.python 0x00000001063c2665 call_function + 533
10 org.python.python 0x00000001063bf46e _PyEval_EvalFrameDefault + 25678
11 org.python.python 0x00000001062f43d0 function_code_fastcall + 128
12 org.python.python 0x00000001063c260c call_function + 444
13 org.python.python 0x00000001063bf44a _PyEval_EvalFrameDefault + 25642
14 org.python.python 0x00000001062f43d0 function_code_fastcall + 128
15 org.python.python 0x00000001063c260c call_function + 444
16 org.python.python 0x00000001063bf44a _PyEval_EvalFrameDefault + 25642
17 org.python.python 0x00000001062f43d0 function_code_fastcall + 128
18 org.python.python 0x00000001062f6a9a method_vectorcall + 170
19 org.python.python 0x00000001063c260c call_function + 444
20 org.python.python 0x00000001063bf46e _PyEval_EvalFrameDefault + 25678
21 org.python.python 0x00000001062f43d0 function_code_fastcall + 128
22 org.python.python 0x00000001062f6a9a method_vectorcall + 170
23 org.python.python 0x00000001063c260c call_function + 444
24 org.python.python 0x00000001063bf46e _PyEval_EvalFrameDefault + 25678
25 org.python.python 0x00000001062f43d0 function_code_fastcall + 128
26 org.python.python 0x00000001063c260c call_function + 444
27 org.python.python 0x00000001063bf46e _PyEval_EvalFrameDefault + 25678
28 org.python.python 0x00000001062f43d0 function_code_fastcall + 128
29 org.python.python 0x00000001063c260c call_function + 444
30 org.python.python 0x00000001063bf44a _PyEval_EvalFrameDefault + 25642
31 org.python.python 0x00000001063c3454 _PyEval_EvalCodeWithName + 2804
32 org.python.python 0x00000001062f456e _PyFunction_Vectorcall + 270
33 org.python.python 0x00000001062f6a9a method_vectorcall + 170
34 org.python.python 0x00000001063c260c call_function + 444
35 org.python.python 0x00000001063bf46e _PyEval_EvalFrameDefault + 25678
36 org.python.python 0x00000001063c3454 _PyEval_EvalCodeWithName + 2804
37 org.python.python 0x00000001062f456e _PyFunction_Vectorcall + 270
38 org.python.python 0x00000001062f3dad PyVectorcall_Call + 109
39 sip.cpython-38-darwin.so 0x00000001110aa9d7 sip_api_call_procedure_method + 199
40 QtWidgets.abi3.so 0x000000011125e688 sipQDockWidget::closeEvent(QCloseEvent*) + 104
41 QtWidgets 0x00000001117220f9 QWidget::event(QEvent*) + 1209
42 QtWidgets 0x0000000111800d27 QDockWidget::event(QEvent*) + 791
43 QtWidgets.abi3.so 0x000000011125d67f sipQDockWidget::event(QEvent*) + 191
44 QtWidgets 0x00000001116e79ea QApplicationPrivate::notify_helper(QObject*, QEvent*) + 266
45 QtWidgets 0x00000001116e8e11 QApplication::notify(QObject*, QEvent*) + 497
46 QtWidgets.abi3.so 0x000000011129adb9 sipQApplication::notify(QObject*, QEvent*) + 233
47 QtCore 0x0000000110a48a34 QCoreApplication::notifyInternal2(QObject*, QEvent*) + 212
48 QtWidgets 0x0000000111710fd5 QWidgetPrivate::close_helper(QWidgetPrivate::CloseMode) + 165
49 QtWidgets 0x000000011173f86d QWidgetWindow::event(QEvent*) + 621
50 QtWidgets 0x00000001116e79ea QApplicationPrivate::notify_helper(QObject*, QEvent*) + 266
51 QtWidgets 0x00000001116e8e11 QApplication::notify(QObject*, QEvent*) + 497
52 QtWidgets.abi3.so 0x000000011129adb9 sipQApplication::notify(QObject*, QEvent*) + 233
53 QtCore 0x0000000110a48a34 QCoreApplication::notifyInternal2(QObject*, QEvent*) + 212
54 QtGui 0x0000000113dacb9e QGuiApplicationPrivate::processWindowSystemEvent(QWindowSystemInterfacePrivate::WindowSystemEvent*) + 2494
55 QtGui 0x0000000113d8d8f3 bool QWindowSystemInterfacePrivate::handleWindowSystemEvent(QWindowSystemInterfacePrivate::WindowSystemEvent*) + 115
56 libqcocoa.dylib 0x000000012185574e QCocoaWindow::windowShouldClose() + 190
57 libqcocoa.dylib 0x000000012186a5c5 -[QNSWindowDelegate windowShouldClose:] + 69
58 com.apple.AppKit 0x00007fff2f5db9de __19-[NSWindow __close]_block_invoke + 181
59 com.apple.AppKit 0x00007fff2f5db91c -[NSWindow __close] + 292
60 com.apple.AppKit 0x00007fff2f5078d4 -[NSApplication(NSResponder) sendAction:to:from:] + 299
61 com.apple.AppKit 0x00007fff2f567084 -[NSControl sendAction:to:] + 86
62 com.apple.AppKit 0x00007fff2f566fb6 __26-[NSCell _sendActionFrom:]_block_invoke + 136
63 com.apple.AppKit 0x00007fff2f566eb8 -[NSCell _sendActionFrom:] + 171
64 com.apple.AppKit 0x00007fff2f58f423 -[NSButtonCell _sendActionFrom:] + 96
65 com.apple.AppKit 0x00007fff2f8fc39c NSControlTrackMouse + 1745
66 com.apple.AppKit 0x00007fff2f5658d4 -[NSCell trackMouse:inRect:ofView:untilMouseUp:] + 130
67 com.apple.AppKit 0x00007fff2f58f18c -[NSButtonCell trackMouse:inRect:ofView:untilMouseUp:] + 691
68 com.apple.AppKit 0x00007fff2f564b6b -[NSControl mouseDown:] + 748
69 com.apple.AppKit 0x00007fff2f5c4787 -[_NSThemeWidget mouseDown:] + 86
70 com.apple.AppKit 0x00007fff2f4575e9 -[NSWindow(NSEventRouting) _handleMouseDownEvent:isDelayedEvent:] + 4907
71 com.apple.AppKit 0x00007fff2f39aeb0 -[NSWindow(NSEventRouting) _reallySendEvent:isDelayedEvent:] + 2612
72 com.apple.AppKit 0x00007fff2f39a23d -[NSWindow(NSEventRouting) sendEvent:] + 349
73 libqcocoa.dylib 0x0000000121869df5 -[QNSPanel sendEvent:] + 549
74 com.apple.AppKit 0x00007fff2f25e45c -[NSApplication(NSEvent) sendEvent:] + 352
75 libqcocoa.dylib 0x000000012187012a -[QNSApplication sendEvent:] + 74
76 com.apple.AppKit 0x00007fff2f24dda7 -[NSApplication run] + 707
77 libqcocoa.dylib 0x000000012186c62f QCocoaEventDispatcher::processEvents(QFlags) + 2495
78 QtCore 0x0000000110a44acf QEventLoop::exec(QFlags) + 431
79 QtCore 0x0000000110a49042 QCoreApplication::exec() + 130
80 QtWidgets.abi3.so 0x000000011138c702 meth_QApplication_exec_(_object*, _object*) + 82
81 org.python.python 0x00000001062f40c2 cfunction_call_varargs + 290
82 org.python.python 0x00000001062f3a85 _PyObject_MakeTpCall + 373
83 org.python.python 0x00000001063c2665 call_function + 533
84 org.python.python 0x00000001063bf46e _PyEval_EvalFrameDefault + 25678
85 org.python.python 0x00000001062f43d0 function_code_fastcall + 128
86 org.python.python 0x00000001062f6a9a method_vectorcall + 170
87 org.python.python 0x00000001063c260c call_function + 444
88 org.python.python 0x00000001063bf46e _PyEval_EvalFrameDefault + 25678
89 org.python.python 0x00000001063c3454 _PyEval_EvalCodeWithName + 2804
90 org.python.python 0x00000001062f456e _PyFunction_Vectorcall + 270
91 org.python.python 0x00000001063c260c call_function + 444
92 org.python.python 0x00000001063bf505 _PyEval_EvalFrameDefault + 25829
93 org.python.python 0x00000001063c3454 _PyEval_EvalCodeWithName + 2804
94 org.python.python 0x00000001063b8f44 PyEval_EvalCode + 100
95 org.python.python 0x00000001063b6332 builtin_exec + 626
96 org.python.python 0x00000001063305ff cfunction_vectorcall_FASTCALL + 175
97 org.python.python 0x00000001063c260c call_function + 444
98 org.python.python 0x00000001063bf505 _PyEval_EvalFrameDefault + 25829
99 org.python.python 0x00000001063c3454 _PyEval_EvalCodeWithName + 2804
100 org.python.python 0x00000001062f456e _PyFunction_Vectorcall + 270
101 org.python.python 0x00000001063c260c call_function + 444
102 org.python.python 0x00000001063bf505 _PyEval_EvalFrameDefault + 25829
103 org.python.python 0x00000001063c3454 _PyEval_EvalCodeWithName + 2804
104 org.python.python 0x00000001062f456e _PyFunction_Vectorcall + 270
105 org.python.python 0x00000001062f3dad PyVectorcall_Call + 109
106 org.python.python 0x0000000106425eb3 pymain_run_module + 195
107 org.python.python 0x0000000106425585 Py_RunMain + 1413
108 org.python.python 0x0000000106425bdf pymain_main + 223
109 org.python.python 0x0000000106425aeb Py_Main + 43
110 edu.ucsf.cgl.ChimeraX 0x00000001062cadc8 main + 120
111 libdyld.dylib 0x00007fff695692e5 start + 1
Thread 1:: ThreadPoolServiceThread
0 libsystem_kernel.dylib 0x00007fff696ba2da kevent64 + 10
1 QtWebEngineCore 0x0000000117069e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x0000000117069cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x0000000116ff262b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x0000000116fb67cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x0000000116ffda94 base::internal::ServiceThread::Run(base::RunLoop*) + 20
6 QtWebEngineCore 0x0000000117011a7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x000000011705ae07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125
9 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15
Thread 2:: ThreadPoolBackgroundWorker
0 libsystem_kernel.dylib 0x00007fff696b2166 mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff696b26cc mach_msg + 60
2 QtWebEngineCore 0x000000011705f492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x0000000117007778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x0000000117008150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x0000000117007c44 base::internal::WorkerThread::RunBackgroundPooledWorker() + 20
6 QtWebEngineCore 0x000000011705ae07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125
8 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15
Thread 3:: Chrome_IOThread
0 libsystem_kernel.dylib 0x00007fff696ba2da kevent64 + 10
1 QtWebEngineCore 0x0000000117069e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x0000000117069cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x0000000116ff262b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x0000000116fb67cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x000000011af36f06 content::BrowserProcessSubThread::IOThreadRun(base::RunLoop*) + 102
6 QtWebEngineCore 0x0000000117011a7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x000000011705ae07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125
9 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15
Thread 4:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff696b2166 mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff696b26cc mach_msg + 60
2 QtWebEngineCore 0x000000011705f492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011705f2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x0000000116f871db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x0000000116ff262b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x0000000116fb67cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x0000000117011a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x000000011705ae07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125
10 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15
Thread 5:: CompositorTileWorker1
0 libsystem_kernel.dylib 0x00007fff696b5916 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff69776040 _pthread_cond_wait + 701
2 QtWebEngineCore 0x0000000117056e18 base::ConditionVariable::Wait() + 104
3 QtWebEngineCore 0x000000011830e5f8 non-virtual thunk to cc::SingleThreadTaskGraphRunner::Run() + 56
4 QtWebEngineCore 0x000000011705ae07 base::(anonymous namespace)::ThreadFunc(void*) + 87
5 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125
6 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15
Thread 6:: Chrome_InProcGpuThread
0 libsystem_kernel.dylib 0x00007fff696b2166 mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff696b26cc mach_msg + 60
2 QtWebEngineCore 0x000000011705f492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x0000000116f8720f base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 223
4 QtWebEngineCore 0x0000000116ff262b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
5 QtWebEngineCore 0x0000000116fb67cb base::RunLoop::Run() + 395
6 QtWebEngineCore 0x0000000117011a7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x000000011705ae07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125
9 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15
Thread 7:: Chrome_ChildIOThread
0 libsystem_kernel.dylib 0x00007fff696ba2da kevent64 + 10
1 QtWebEngineCore 0x0000000117069e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x0000000117069cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x0000000116ff262b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x0000000116fb67cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x0000000117011a7d base::Thread::ThreadMain() + 413
6 QtWebEngineCore 0x000000011705ae07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125
8 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15
Thread 8:: VizCompositorThread
0 libsystem_kernel.dylib 0x00007fff696b2166 mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff696b26cc mach_msg + 60
2 QtWebEngineCore 0x000000011705f492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011705f2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x0000000116f871db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x0000000116ff262b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x0000000116fb67cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x0000000117011a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x000000011705ae07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125
10 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15
Thread 9:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff696b2166 mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff696b26cc mach_msg + 60
2 QtWebEngineCore 0x000000011705f492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011705f2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x0000000116f871db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x0000000116ff262b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x0000000116fb67cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x0000000117011a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x000000011705ae07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125
10 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15
Thread 10:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff696b2166 mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff696b26cc mach_msg + 60
2 QtWebEngineCore 0x000000011705f492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011705f2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x0000000116f871db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x0000000116ff262b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x0000000116fb67cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x0000000117011a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x000000011705ae07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125
10 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15
Thread 11:: ThreadPoolSingleThreadForegroundBlocking0
0 libsystem_kernel.dylib 0x00007fff696b2166 mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff696b26cc mach_msg + 60
2 QtWebEngineCore 0x000000011705f492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011705f2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000011700776a base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 42
5 QtWebEngineCore 0x0000000117008150 base::internal::WorkerThread::RunWorker() + 1024
6 QtWebEngineCore 0x0000000117007d34 base::internal::WorkerThread::RunDedicatedWorker() + 20
7 QtWebEngineCore 0x000000011705ae07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125
9 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15
Thread 12:: MemoryInfra
0 libsystem_kernel.dylib 0x00007fff696b2166 mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff696b26cc mach_msg + 60
2 QtWebEngineCore 0x000000011705f492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011705f2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x0000000116f871db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x0000000116ff262b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x0000000116fb67cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x0000000117011a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x000000011705ae07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125
10 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15
Thread 13:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff696b2166 mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff696b26cc mach_msg + 60
2 QtWebEngineCore 0x000000011705f492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011705f2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x0000000116f871db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x0000000116ff262b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x0000000116fb67cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x0000000117011a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x000000011705ae07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125
10 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15
Thread 14:: com.apple.NSEventThread
0 libsystem_kernel.dylib 0x00007fff696b2166 mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff696b26cc mach_msg + 60
2 com.apple.CoreFoundation 0x00007fff3204936b __CFRunLoopServiceMachPort + 322
3 com.apple.CoreFoundation 0x00007fff32048907 __CFRunLoopRun + 1695
4 com.apple.CoreFoundation 0x00007fff32047fe3 CFRunLoopRunSpecific + 499
5 com.apple.AppKit 0x00007fff2f25bdba _NSEventThread + 132
6 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125
7 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15
Thread 15:: ThreadPoolSingleThreadSharedBackgroundBlocking1
0 libsystem_kernel.dylib 0x00007fff696b2166 mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff696b26cc mach_msg + 60
2 QtWebEngineCore 0x000000011705f492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011705f2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000011700776a base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 42
5 QtWebEngineCore 0x0000000117007e3d base::internal::WorkerThread::RunWorker() + 237
6 QtWebEngineCore 0x0000000117007c74 base::internal::WorkerThread::RunBackgroundSharedWorker() + 20
7 QtWebEngineCore 0x000000011705ae07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125
9 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15
Thread 16:: ThreadPoolSingleThreadSharedForeground2
0 libsystem_kernel.dylib 0x00007fff696b2166 mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff696b26cc mach_msg + 60
2 QtWebEngineCore 0x000000011705f492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011705f2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000011700776a base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 42
5 QtWebEngineCore 0x0000000117008150 base::internal::WorkerThread::RunWorker() + 1024
6 QtWebEngineCore 0x0000000117007d04 base::internal::WorkerThread::RunSharedWorker() + 20
7 QtWebEngineCore 0x000000011705ae07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125
9 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15
Thread 17:
0 libsystem_kernel.dylib 0x00007fff696b5916 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff69776040 _pthread_cond_wait + 701
2 libopenblas.0.dylib 0x000000015ab182eb blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125
4 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15
Thread 18:
0 libsystem_kernel.dylib 0x00007fff696b5916 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff69776040 _pthread_cond_wait + 701
2 libopenblas.0.dylib 0x0000000107e3527b blas_thread_server + 507
3 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125
4 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15
Thread 19:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff696b2166 mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff696b26cc mach_msg + 60
2 QtWebEngineCore 0x000000011705f492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x0000000117007778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x0000000117008150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x0000000117007cd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x000000011705ae07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125
8 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15
Thread 20:
0 libsystem_pthread.dylib 0x00007fff6977256c start_wqthread + 0
Thread 21:: Dispatch queue: com.apple.root.user-interactive-qos
0 libsystem_kernel.dylib 0x00007fff696b2166 mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff696b26cc mach_msg + 60
2 com.apple.QuartzCore 0x00007fff3d9c5eb3 CA::CA_BLOCKED_WAITING_FOR_CLIENT_FENCES(unsigned int, unsigned long) + 170
3 com.apple.QuartzCore 0x00007fff3d9c6a2a CA::Context::commit_transaction(CA::Transaction*, double) + 1906
4 com.apple.QuartzCore 0x00007fff3d89075e CA::Transaction::commit() + 638
5 com.apple.AppKit 0x00007fff2f284ed4 NSPerformVisuallyAtomicChange + 154
6 com.apple.AppKit 0x00007fff2f500012 __42-[NSAnimation(NSInternal) _runInNewThread]_block_invoke + 80
7 libdispatch.dylib 0x00007fff69518583 _dispatch_call_block_and_release + 12
8 libdispatch.dylib 0x00007fff6951950e _dispatch_client_callout + 8
9 libdispatch.dylib 0x00007fff69527933 _dispatch_root_queue_drain + 663
10 libdispatch.dylib 0x00007fff69527f22 _dispatch_worker_thread2 + 92
11 libsystem_pthread.dylib 0x00007fff697726d5 _pthread_wqthread + 220
12 libsystem_pthread.dylib 0x00007fff6977257b start_wqthread + 15
Thread 22:
0 libsystem_pthread.dylib 0x00007fff6977256c start_wqthread + 0
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x0000000112206dc0 rcx: 0x00000001067ada58 rdx: 0x0000000000000000
rdi: 0x0000000000000307 rsi: 0x000000000000000b rbp: 0x00000001067ada80 rsp: 0x00000001067ada58
r8: 0x00000001067adf48 r9: 0x788ede42d5acaaad r10: 0x0000000112206e6c r11: 0x0000000000000246
r12: 0x0000000000000307 r13: 0x0000000150a9ea60 r14: 0x000000000000000b r15: 0x0000000000000016
rip: 0x00007fff696b849a rfl: 0x0000000000000246 cr2: 0x000000010650a7e0
Logical CPU: 0
Error Code: 0x02000148
Trap Number: 133
Binary Images:
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0x7fff69661000 - 0x7fff69662ffb libsystem_featureflags.dylib (17) /usr/lib/system/libsystem_featureflags.dylib
0x7fff69663000 - 0x7fff696b0ff7 libsystem_info.dylib (538) /usr/lib/system/libsystem_info.dylib
0x7fff696b1000 - 0x7fff696ddff7 libsystem_kernel.dylib (6153.41.3) /usr/lib/system/libsystem_kernel.dylib
0x7fff696de000 - 0x7fff69725ff7 libsystem_m.dylib (3178) /usr/lib/system/libsystem_m.dylib
0x7fff69726000 - 0x7fff6974dff7 libsystem_malloc.dylib (283.40.1) /usr/lib/system/libsystem_malloc.dylib
0x7fff6974e000 - 0x7fff6975bff3 libsystem_networkextension.dylib (1095.40.22) /usr/lib/system/libsystem_networkextension.dylib
0x7fff6975c000 - 0x7fff69765fff libsystem_notify.dylib (241) /usr/lib/system/libsystem_notify.dylib
0x7fff69766000 - 0x7fff6976ffe7 libsystem_platform.dylib (220) /usr/lib/system/libsystem_platform.dylib
0x7fff69770000 - 0x7fff6977aff7 libsystem_pthread.dylib (416.40.3) /usr/lib/system/libsystem_pthread.dylib
0x7fff6977b000 - 0x7fff6977fffb libsystem_sandbox.dylib (1217.41.1) /usr/lib/system/libsystem_sandbox.dylib
0x7fff69780000 - 0x7fff69782fff libsystem_secinit.dylib (62.40.2) /usr/lib/system/libsystem_secinit.dylib
0x7fff69783000 - 0x7fff6978affb libsystem_symptoms.dylib (1238.40.4) /usr/lib/system/libsystem_symptoms.dylib
0x7fff6978b000 - 0x7fff697a1ff2 libsystem_trace.dylib (1147.40.13) /usr/lib/system/libsystem_trace.dylib
0x7fff697a3000 - 0x7fff697a8ffb libunwind.dylib (35.4) /usr/lib/system/libunwind.dylib
0x7fff697a9000 - 0x7fff697ddff6 libxpc.dylib (1738.40.10) /usr/lib/system/libxpc.dylib
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 21
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 6110
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=1.0G resident=0K(0%) swapped_out_or_unallocated=1.0G(100%)
Writable regions: Total=1.7G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=1.7G(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 512K 4
Activity Tracing 256K 1
CG backing stores 248K 2
CG image 136K 25
CoreAnimation 132K 26
CoreGraphics 8K 1
CoreImage 24K 5
CoreUI image data 1372K 22
Foundation 24K 2
Kernel Alloc Once 8K 1
MALLOC 1.0G 1383
MALLOC guard page 32K 8
MALLOC_LARGE (reserved) 384K 1 reserved VM address space (unallocated)
MALLOC_NANO (reserved) 384.0M 1 reserved VM address space (unallocated)
Mach message 24K 3
Memory Tag 242 12K 1
OpenGL GLSL 384K 5
STACK GUARD 88K 22
Stack 139.2M 23
Stack Guard 56.0M 1
VM_ALLOCATE 152.9M 154
VM_ALLOCATE (reserved) 32.0M 1 reserved VM address space (unallocated)
__DATA 53.4M 615
__DATA_CONST 40K 4
__FONT_DATA 4K 1
__GLSLBUILTINS 5176K 1
__LINKEDIT 454.3M 183
__OBJC_RO 32.0M 1
__OBJC_RW 1780K 2
__TEXT 597.3M 562
__UNICODE 564K 1
mapped file 385.8M 47
shared memory 2852K 26
=========== ======= =======
TOTAL 3.3G 3135
TOTAL, minus reserved VM space 2.9G 3135
System Profile:
Network Service: Wi-Fi, AirPort, en0
Thunderbolt Bus: MacBook Air, Apple Inc., 27.2
Boot Volume File System Type: apfs
Memory Module: BANK 0/DIMM0, 2 GB, DDR3, 1600 MHz, 0x80AD, 0x483943434E4E4E384A544D4C41522D4E544D
Memory Module: BANK 1/DIMM0, 2 GB, DDR3, 1600 MHz, 0x80AD, 0x483943434E4E4E384A544D4C41522D4E544D
USB Device: USB 3.0 Bus
USB Device: BRCM20702 Hub
USB Device: Bluetooth USB Host Controller
USB Device: Wireless Device
Serial ATA Device: APPLE SSD SM0128G, 121.33 GB
Model: MacBookAir7,2, BootROM 190.0.0.0.0, 2 processors, Dual-Core Intel Core i5, 1.6 GHz, 4 GB, SMC 2.27f2
Graphics: kHW_IntelHDGraphics6000Item, Intel HD Graphics 6000, spdisplays_builtin
AirPort: spairport_wireless_card_type_airport_extreme (0x14E4, 0x117), Broadcom BCM43xx 1.0 (7.77.106.3 AirPortDriverBrcmNIC-1435.3)
Bluetooth: Version 7.0.1f1, 3 services, 18 devices, 1 incoming serial ports
Log:
UCSF ChimeraX version: 1.2.5 (2021-05-24)
© 2016-2021 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 INTEL-14.2.16
OpenGL renderer: Intel(R) HD Graphics 6000
OpenGL vendor: Intel Inc.Hardware:
Hardware Overview:
Model Name: MacBook Air
Model Identifier: MacBookAir7,2
Processor Name: Dual-Core Intel Core i5
Processor Speed: 1.6 GHz
Number of Processors: 1
Total Number of Cores: 2
L2 Cache (per Core): 256 KB
L3 Cache: 3 MB
Hyper-Threading Technology: Enabled
Memory: 4 GB
Boot ROM Version: 190.0.0.0.0
SMC Version (system): 2.27f2
Software:
System Software Overview:
System Version: macOS 10.15.1 (19B88)
Kernel Version: Darwin 19.0.0
Time since boot: 6 days 4:02
Graphics/Displays:
Intel HD Graphics 6000:
Chipset Model: Intel HD Graphics 6000
Type: GPU
Bus: Built-In
VRAM (Dynamic, Max): 1536 MB
Vendor: Intel
Device ID: 0x1626
Revision ID: 0x0009
Metal: Supported, feature set macOS GPUFamily1 v4
Displays:
Color LCD:
Display Type: LCD
Resolution: 1440 x 900 (Widescreen eXtended Graphics Array Plus)
UI Looks like: 1440 x 900
Framebuffer Depth: 24-Bit Color (ARGB8888)
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: No
Connection Type: Internal
Locale: (None, 'UTF-8')
PyQt5 5.15.2, Qt 5.15.2
Installed Packages:
alabaster: 0.7.12
appdirs: 1.4.4
appnope: 0.1.2
Babel: 2.9.1
backcall: 0.2.0
blockdiag: 2.0.1
certifi: 2020.12.5
cftime: 1.5.0
chardet: 3.0.4
ChimeraX-AddCharge: 1.0.1
ChimeraX-AddH: 2.1.6
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.1
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.13.2
ChimeraX-AtomicLibrary: 3.1.3
ChimeraX-AtomSearch: 2.0
ChimeraX-AtomSearchLibrary: 1.0
ChimeraX-AxesPlanes: 2.0
ChimeraX-BasicActions: 1.1
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 1.1
ChimeraX-BondRot: 2.0
ChimeraX-BugReporter: 1.0
ChimeraX-BuildStructure: 2.5.2
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.1
ChimeraX-ButtonPanel: 1.0
ChimeraX-CageBuilder: 1.0
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.1
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.1
ChimeraX-ColorActions: 1.0
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.2.1
ChimeraX-CommandLine: 1.1.4
ChimeraX-ConnectStructure: 2.0
ChimeraX-Contacts: 1.0
ChimeraX-Core: 1.2.5
ChimeraX-CoreFormats: 1.0
ChimeraX-coulombic: 1.1.1
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0
ChimeraX-DataFormats: 1.1
ChimeraX-Dicom: 1.0
ChimeraX-DistMonitor: 1.1.3
ChimeraX-DistUI: 1.0
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0
ChimeraX-FunctionKey: 1.0
ChimeraX-Geometry: 1.1
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.0
ChimeraX-Hbonds: 2.1
ChimeraX-Help: 1.1
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.0
ChimeraX-ImageFormats: 1.1
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-Label: 1.0
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.2
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.1
ChimeraX-Map: 1.0.2
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.0
ChimeraX-Markers: 1.0
ChimeraX-Mask: 1.0
ChimeraX-MatchMaker: 1.2.1
ChimeraX-MDcrds: 2.2
ChimeraX-MedicalToolbar: 1.0.1
ChimeraX-Meeting: 1.0
ChimeraX-MLP: 1.1
ChimeraX-mmCIF: 2.3
ChimeraX-MMTF: 2.1
ChimeraX-Modeller: 1.0.1
ChimeraX-ModelPanel: 1.0.1
ChimeraX-ModelSeries: 1.0
ChimeraX-Mol2: 2.0
ChimeraX-Morph: 1.0
ChimeraX-MouseModes: 1.1
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0.1
ChimeraX-OpenCommand: 1.5
ChimeraX-PDB: 2.4.1
ChimeraX-PDBBio: 1.0
ChimeraX-PDBLibrary: 1.0.1
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.0.1
ChimeraX-PubChem: 2.0.1
ChimeraX-ReadPbonds: 1.0
ChimeraX-Registration: 1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-ResidueFit: 1.0
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.4
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SeqView: 2.3
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0
ChimeraX-Shortcuts: 1.0
ChimeraX-ShowAttr: 1.0
ChimeraX-ShowSequences: 1.0
ChimeraX-SideView: 1.0
ChimeraX-Smiles: 2.0.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.3.1
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-Struts: 1.0
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0
ChimeraX-SwapRes: 2.1
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.0.1
ChimeraX-ToolshedUtils: 1.2
ChimeraX-Tug: 1.0
ChimeraX-UI: 1.7.6
ChimeraX-uniprot: 2.1
ChimeraX-UnitCell: 1.0
ChimeraX-ViewDockX: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0
ChimeraX-WebServices: 1.0
ChimeraX-Zone: 1.0
colorama: 0.4.3
comtypes: 1.1.7
cxservices: 1.0
cycler: 0.10.0
Cython: 0.29.21
decorator: 5.0.9
distlib: 0.3.1
docutils: 0.16
filelock: 3.0.12
funcparserlib: 0.3.6
grako: 3.16.5
h5py: 2.10.0
html2text: 2020.1.16
idna: 2.10
ihm: 0.17
imagecodecs: 2020.5.30
imagesize: 1.2.0
ipykernel: 5.3.4
ipython: 7.18.1
ipython-genutils: 0.2.0
jedi: 0.17.2
Jinja2: 2.11.2
jupyter-client: 6.1.7
jupyter-core: 4.7.1
kiwisolver: 1.3.1
line-profiler: 2.1.2
lxml: 4.6.2
lz4: 3.1.0
MarkupSafe: 2.0.1
matplotlib: 3.3.2
matplotlib-inline: 0.1.2
msgpack: 1.0.0
netCDF4: 1.5.4
networkx: 2.5
numexpr: 2.7.3
numpy: 1.19.2
numpydoc: 1.1.0
openvr: 1.14.1501
packaging: 20.9
ParmEd: 3.2.0
parso: 0.7.1
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 7.2.0
pip: 21.0.1
pkginfo: 1.5.0.1
prompt-toolkit: 3.0.18
psutil: 5.7.2
ptyprocess: 0.7.0
pycollada: 0.7.1
pydicom: 2.0.0
Pygments: 2.7.1
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 2.4.7
PyQt5-commercial: 5.15.2
PyQt5-sip: 12.8.1
PyQtWebEngine-commercial: 5.15.2
python-dateutil: 2.8.1
pytz: 2021.1
pyzmq: 22.0.3
qtconsole: 4.7.7
QtPy: 1.9.0
RandomWords: 0.3.0
requests: 2.24.0
scipy: 1.5.2
setuptools: 50.3.2
sfftk-rw: 0.6.7.dev1
six: 1.15.0
snowballstemmer: 2.1.0
sortedcontainers: 2.2.2
Sphinx: 3.2.1
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 2.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 2.0.0
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.5
suds-jurko: 0.6
tables: 3.6.1
tifffile: 2020.9.3
tinyarray: 1.2.3
tornado: 6.1
traitlets: 5.0.5
urllib3: 1.25.11
wcwidth: 0.2.5
webcolors: 1.11.1
wheel: 0.36.0
wheel-filename: 1.3.0
Change History (3)
comment:1 by , 4 years ago
| Cc: | added |
|---|---|
| Component: | Unassigned → UI |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → accepted |
| Summary: | ChimeraX bug report submission → Crash removing destroyed tool/dock widget |
comment:2 by , 4 years ago
| Status: | accepted → feedback |
|---|
comment:3 by , 4 years ago
Seems the user clicked the close icon on the title bar of a ChimeraX tool. Then Qt crashed in removeDockWidget(). It is in some Python close event handler, I guess ChimeraX MainWindow.close_request() which calls tool_window._destroy(). That seems possibly dangerous. We are in a Qt closeEvent handler and possibly trying to delete widgets that are already in the process of being deleted by the close event is not allowed. I've seen this kind of problem before where deleting a widget in a Qt event handler where the event came from that widget causes a crash.
Note:
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Hi Crystal,
Thanks for reporting this problem. Do you remember what you were doing when this crash occurred? Were you closing some tool/window?
--Eric