![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 4 years ago
Closed 4 years ago
#5097 closed defect (fixed)
Crash in sseq.structure
| Reported by: | Elaine Meng | Owned by: | Eric Pettersen |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Sequence | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: macOS-10.15.7-x86_64-i386-64bit
ChimeraX Version: 1.3.dev202108221453 (2021-08-22 14:53:54 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
I reproduced this twice. opened 2mnr and 3toy, deleted all chains except A, showed 2mnr chain A sequence, associated 3toy with it. Now two chains are associated with the sequence. At this point saved session (attached).
Next I tried closing 2mnr which was tolerated for keeping the sequence open. Then I tried saving the session again which caused this problem.
Fatal Python error: Segmentation fault
Current thread 0x000000010b2a8dc0 (most recent call first):
File "/Users/meng/Desktop/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/atomic/molc.py", line 78 in get_prop
File "/Users/meng/Desktop/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/atomic/molobject.py", line 1147 in take_snapshot
File "/Users/meng/Desktop/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/session.py", line 281 in process
File "/Users/meng/Desktop/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/session.py", line 260 in discovery
File "/Users/meng/Desktop/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/session.py", line 608 in save
File "/Users/meng/Desktop/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/session.py", line 878 in save
File "/Users/meng/Desktop/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core_formats/__init__.py", line 84 in save
File "/Users/meng/Desktop/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/save_command/cmd.py", line 89 in provider_save
File "/Users/meng/Desktop/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/commands/cli.py", line 2856 in run
File "/Users/meng/Desktop/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/save_command/cmd.py", line 75 in cmd_save
File "/Users/meng/Desktop/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/commands/cli.py", line 2856 in run
File "/Users/meng/Desktop/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/cmd_line/tool.py", line 297 in execute
File "/Users/meng/Desktop/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/cmd_line/tool.py", line 134 in keyPressEvent
File "/Users/meng/Desktop/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/ui/gui.py", line 301 in event_loop
File "/Users/meng/Desktop/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/ChimeraX_main.py", line 882 in init
File "/Users/meng/Desktop/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/ChimeraX_main.py", line 1031 in
File "/Users/meng/Desktop/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 87 in _run_code
File "/Users/meng/Desktop/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 197 in _run_module_as_main
Process: ChimeraX [14410]
Path: /Users/USER/Desktop/ChimeraX_Daily.app/Contents/MacOS/ChimeraX
Identifier: edu.ucsf.cgl.ChimeraX
Version: 1.3.0 (1.3.0.0)
Code Type: X86-64 (Native)
Parent Process: ??? [1]
Responsible: ChimeraX [14410]
User ID: 504
Date/Time: 2021-08-23 17:11:01.273 -0700
OS Version: Mac OS X 10.15.7 (19H1323)
Report Version: 12
Anonymous UUID: 2E059A98-7BEC-0474-05F4-65B7CBAB8B4F
Sleep/Wake UUID: 0C703922-834A-44F5-984F-24CE3D212785
Time Awake Since Boot: 26000 seconds
Time Since Wake: 22000 seconds
System Integrity Protection: enabled
Crashed Thread: 0 CrBrowserMain Dispatch queue: com.apple.main-thread
Exception Type: EXC_BAD_ACCESS (SIGSEGV)
Exception Codes: KERN_INVALID_ADDRESS at 0xfffffffffffffff8
Exception Note: EXC_CORPSE_NOTIFY
VM Regions Near 0xfffffffffffffff8:
--> shared memory 00007fffffe47000-00007fffffe48000 [ 4K] r-x/r-x SM=SHM
Thread 0 Crashed:: CrBrowserMain Dispatch queue: com.apple.main-thread
0 libsystem_kernel.dylib 0x00007fff6c1c633a __pthread_kill + 10
1 libsystem_pthread.dylib 0x00007fff6c282e60 pthread_kill + 430
2 libsystem_c.dylib 0x00007fff6c0dd93e raise + 26
3 libsystem_platform.dylib 0x00007fff6c2775fd _sigtramp + 29
4 ??? 000000000000000000 0 + 0
5 libmolc.dylib 0x00000001209a08a9 sseq_structure + 57
6 libffi.dylib 0x00007fff69e20905 ffi_call_unix64 + 85
7 libffi.dylib 0x00007fff69e20244 ffi_call_int + 694
8 _ctypes.cpython-39-darwin.so 0x000000010989fead _ctypes_callproc + 1037
9 _ctypes.cpython-39-darwin.so 0x0000000109899c36 PyCFuncPtr_call + 1206
10 org.python.python 0x0000000100a0017d _PyObject_MakeTpCall + 365
11 org.python.python 0x0000000100ad861c call_function + 876
12 org.python.python 0x0000000100ad5b4b _PyEval_EvalFrameDefault + 25371
13 org.python.python 0x0000000100ad9283 _PyEval_EvalCode + 2611
14 org.python.python 0x0000000100a008d1 _PyFunction_Vectorcall + 289
15 org.python.python 0x0000000100a0a223 property_descr_get + 115
16 org.python.python 0x0000000100a42fb3 _PyObject_GenericGetAttrWithDict + 163
17 org.python.python 0x0000000100a58fc2 slot_tp_getattr_hook + 210
18 org.python.python 0x0000000100ad40cc _PyEval_EvalFrameDefault + 18588
19 org.python.python 0x0000000100a00948 function_code_fastcall + 104
20 org.python.python 0x0000000100ad858c call_function + 732
21 org.python.python 0x0000000100ad5ab3 _PyEval_EvalFrameDefault + 25219
22 org.python.python 0x0000000100a00948 function_code_fastcall + 104
23 org.python.python 0x0000000100ad858c call_function + 732
24 org.python.python 0x0000000100ad5a92 _PyEval_EvalFrameDefault + 25186
25 org.python.python 0x0000000100a00948 function_code_fastcall + 104
26 org.python.python 0x0000000100ad858c call_function + 732
27 org.python.python 0x0000000100ad5a92 _PyEval_EvalFrameDefault + 25186
28 org.python.python 0x0000000100ad9283 _PyEval_EvalCode + 2611
29 org.python.python 0x0000000100a008d1 _PyFunction_Vectorcall + 289
30 org.python.python 0x0000000100a0298a method_vectorcall + 202
31 org.python.python 0x0000000100ad858c call_function + 732
32 org.python.python 0x0000000100ad5be1 _PyEval_EvalFrameDefault + 25521
33 org.python.python 0x0000000100ad9283 _PyEval_EvalCode + 2611
34 org.python.python 0x0000000100a008d1 _PyFunction_Vectorcall + 289
35 org.python.python 0x0000000100ad61c3 _PyEval_EvalFrameDefault + 27027
36 org.python.python 0x0000000100ad9283 _PyEval_EvalCode + 2611
37 org.python.python 0x0000000100a008d1 _PyFunction_Vectorcall + 289
38 org.python.python 0x0000000100a02a79 method_vectorcall + 441
39 org.python.python 0x0000000100ad61c3 _PyEval_EvalFrameDefault + 27027
40 org.python.python 0x0000000100ad9283 _PyEval_EvalCode + 2611
41 org.python.python 0x0000000100a008d1 _PyFunction_Vectorcall + 289
42 org.python.python 0x0000000100a00572 PyVectorcall_Call + 162
43 org.python.python 0x0000000100ad61c3 _PyEval_EvalFrameDefault + 27027
44 org.python.python 0x0000000100ad9283 _PyEval_EvalCode + 2611
45 org.python.python 0x0000000100a008d1 _PyFunction_Vectorcall + 289
46 org.python.python 0x0000000100a0298a method_vectorcall + 202
47 org.python.python 0x0000000100ad858c call_function + 732
48 org.python.python 0x0000000100ad5be1 _PyEval_EvalFrameDefault + 25521
49 org.python.python 0x0000000100ad9283 _PyEval_EvalCode + 2611
50 org.python.python 0x0000000100a008d1 _PyFunction_Vectorcall + 289
51 org.python.python 0x0000000100a00572 PyVectorcall_Call + 162
52 org.python.python 0x0000000100ad61c3 _PyEval_EvalFrameDefault + 27027
53 org.python.python 0x0000000100ad9283 _PyEval_EvalCode + 2611
54 org.python.python 0x0000000100a008d1 _PyFunction_Vectorcall + 289
55 org.python.python 0x0000000100ad858c call_function + 732
56 org.python.python 0x0000000100ad5a92 _PyEval_EvalFrameDefault + 25186
57 org.python.python 0x0000000100ad9283 _PyEval_EvalCode + 2611
58 org.python.python 0x0000000100a008d1 _PyFunction_Vectorcall + 289
59 org.python.python 0x0000000100a029d2 method_vectorcall + 274
60 QtCore.abi3.so 0x0000000109ebd957 PyQtSlot::call(_object*, _object*) const + 39
61 QtCore.abi3.so 0x0000000109ebd866 PyQtSlot::invoke(void**, _object*, void*, bool) const + 374
62 QtCore.abi3.so 0x0000000109ebe455 PyQtSlotProxy::unislot(void**) + 85
63 QtCore.abi3.so 0x0000000109ebe3ca PyQtSlotProxy::qt_metacall(QMetaObject::Call, int, void**) + 58
64 QtCore 0x000000010a2a1f6e void doActivate(QObject*, int, void**) + 1118
65 QtCore 0x000000010a2a20d5 void doActivate(QObject*, int, void**) + 1477
66 QtWidgets 0x0000000110f8ab14 QWidgetLineControl::processKeyEvent(QKeyEvent*) + 548
67 QtWidgets 0x0000000110f81732 QLineEdit::keyPressEvent(QKeyEvent*) + 34
68 QtWidgets 0x0000000110e79e4f QWidget::event(QEvent*) + 527
69 QtWidgets 0x0000000110f80ae7 QLineEdit::event(QEvent*) + 727
70 QtWidgets 0x0000000110f44cd0 QComboBox::keyPressEvent(QKeyEvent*) + 784
71 QtWidgets.abi3.so 0x000000010a9e3e5b meth_QComboBox_keyPressEvent(_object*, _object*) + 139
72 org.python.python 0x0000000100a3f06d cfunction_call + 125
73 org.python.python 0x0000000100a0017d _PyObject_MakeTpCall + 365
74 org.python.python 0x0000000100ad861c call_function + 876
75 org.python.python 0x0000000100ad5ab3 _PyEval_EvalFrameDefault + 25219
76 org.python.python 0x0000000100ad9283 _PyEval_EvalCode + 2611
77 org.python.python 0x0000000100a008d1 _PyFunction_Vectorcall + 289
78 org.python.python 0x0000000100a02a79 method_vectorcall + 441
79 sip.cpython-39-darwin.so 0x000000010a78fa47 sip_api_call_procedure_method + 199
80 QtWidgets.abi3.so 0x000000010a8e4f18 sipQComboBox::keyPressEvent(QKeyEvent*) + 104
81 QtWidgets 0x0000000110e79e4f QWidget::event(QEvent*) + 527
82 QtWidgets 0x0000000110f44634 QComboBox::event(QEvent*) + 372
83 QtWidgets.abi3.so 0x000000010a8e441f sipQComboBox::event(QEvent*) + 191
84 QtWidgets 0x0000000110e3f9ea QApplicationPrivate::notify_helper(QObject*, QEvent*) + 266
85 QtWidgets 0x0000000110e40fd3 QApplication::notify(QObject*, QEvent*) + 947
86 QtWidgets.abi3.so 0x000000010a8ffdb9 sipQApplication::notify(QObject*, QEvent*) + 233
87 QtCore 0x000000010a26ea34 QCoreApplication::notifyInternal2(QObject*, QEvent*) + 212
88 QtWidgets 0x0000000110e98351 QWidgetWindow::handleKeyEvent(QKeyEvent*) + 145
89 QtWidgets 0x0000000110e97727 QWidgetWindow::event(QEvent*) + 295
90 QtWidgets 0x0000000110e3f9ea QApplicationPrivate::notify_helper(QObject*, QEvent*) + 266
91 QtWidgets 0x0000000110e40e11 QApplication::notify(QObject*, QEvent*) + 497
92 QtWidgets.abi3.so 0x000000010a8ffdb9 sipQApplication::notify(QObject*, QEvent*) + 233
93 QtCore 0x000000010a26ea34 QCoreApplication::notifyInternal2(QObject*, QEvent*) + 212
94 QtGui 0x00000001114ad9c8 QGuiApplicationPrivate::processKeyEvent(QWindowSystemInterfacePrivate::KeyEvent*) + 152
95 QtGui 0x0000000111491d7b QWindowSystemInterface::sendWindowSystemEvents(QFlags) + 219
96 QtGui 0x000000011148cb72 QWindowSystemInterface::flushWindowSystemEvents(QFlags) + 594
97 libqcocoa.dylib 0x000000011ed7f848 -[QNSView(Keys) handleKeyEvent:eventType:] + 1144
98 libqcocoa.dylib 0x000000011ed7fa18 -[QNSView(Keys) keyDown:] + 88
99 com.apple.AppKit 0x00007fff2f3d637d -[NSWindow(NSEventRouting) _reallySendEvent:isDelayedEvent:] + 6512
100 com.apple.AppKit 0x00007fff2f3d47e9 -[NSWindow(NSEventRouting) sendEvent:] + 349
101 libqcocoa.dylib 0x000000011ed82dd5 -[QNSWindow sendEvent:] + 549
102 com.apple.AppKit 0x00007fff2f3d351e -[NSApplication(NSEvent) sendEvent:] + 2826
103 libqcocoa.dylib 0x000000011ed8a12a -[QNSApplication sendEvent:] + 74
104 com.apple.AppKit 0x00007fff2f21fcbf -[NSApplication run] + 707
105 libqcocoa.dylib 0x000000011ed8662f QCocoaEventDispatcher::processEvents(QFlags) + 2495
106 QtCore 0x000000010a26aacf QEventLoop::exec(QFlags) + 431
107 QtCore 0x000000010a26f042 QCoreApplication::exec() + 130
108 QtWidgets.abi3.so 0x000000010a9f1702 meth_QApplication_exec_(_object*, _object*) + 82
109 org.python.python 0x0000000100a3f06d cfunction_call + 125
110 org.python.python 0x0000000100a0017d _PyObject_MakeTpCall + 365
111 org.python.python 0x0000000100ad861c call_function + 876
112 org.python.python 0x0000000100ad5ab3 _PyEval_EvalFrameDefault + 25219
113 org.python.python 0x0000000100a00948 function_code_fastcall + 104
114 org.python.python 0x0000000100a0298a method_vectorcall + 202
115 org.python.python 0x0000000100ad858c call_function + 732
116 org.python.python 0x0000000100ad5ab3 _PyEval_EvalFrameDefault + 25219
117 org.python.python 0x0000000100ad9283 _PyEval_EvalCode + 2611
118 org.python.python 0x0000000100a008d1 _PyFunction_Vectorcall + 289
119 org.python.python 0x0000000100ad858c call_function + 732
120 org.python.python 0x0000000100ad5b4b _PyEval_EvalFrameDefault + 25371
121 org.python.python 0x0000000100ad9283 _PyEval_EvalCode + 2611
122 org.python.python 0x0000000100acf70b PyEval_EvalCode + 139
123 org.python.python 0x0000000100acc592 builtin_exec + 626
124 org.python.python 0x0000000100a3e86a cfunction_vectorcall_FASTCALL + 218
125 org.python.python 0x0000000100ad858c call_function + 732
126 org.python.python 0x0000000100ad5b4b _PyEval_EvalFrameDefault + 25371
127 org.python.python 0x0000000100ad9283 _PyEval_EvalCode + 2611
128 org.python.python 0x0000000100a008d1 _PyFunction_Vectorcall + 289
129 org.python.python 0x0000000100ad858c call_function + 732
130 org.python.python 0x0000000100ad5b4b _PyEval_EvalFrameDefault + 25371
131 org.python.python 0x0000000100ad9283 _PyEval_EvalCode + 2611
132 org.python.python 0x0000000100a008d1 _PyFunction_Vectorcall + 289
133 org.python.python 0x0000000100b3ee20 pymain_run_module + 208
134 org.python.python 0x0000000100b3e537 Py_RunMain + 1431
135 org.python.python 0x0000000100b3eb3f pymain_main + 223
136 org.python.python 0x0000000100b3ea4b Py_Main + 43
137 edu.ucsf.cgl.ChimeraX 0x00000001009badc8 main + 120
138 libdyld.dylib 0x00007fff6c07ecc9 start + 1
Thread 1:
0 libsystem_kernel.dylib 0x00007fff6c1c2882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff6c283425 _pthread_cond_wait + 698
2 libopenblas.0.dylib 0x0000000101b6c21f blas_thread_server + 207
3 libsystem_pthread.dylib 0x00007fff6c283109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff6c27eb8b thread_start + 15
Thread 2:
0 libsystem_kernel.dylib 0x00007fff6c1c2882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff6c283425 _pthread_cond_wait + 698
2 libopenblas.0.dylib 0x0000000101b6c21f blas_thread_server + 207
3 libsystem_pthread.dylib 0x00007fff6c283109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff6c27eb8b thread_start + 15
Thread 3:
0 libsystem_kernel.dylib 0x00007fff6c1c2882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff6c283425 _pthread_cond_wait + 698
2 libopenblas.0.dylib 0x0000000101b6c21f blas_thread_server + 207
3 libsystem_pthread.dylib 0x00007fff6c283109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff6c27eb8b thread_start + 15
Thread 4:: ThreadPoolServiceThread
0 libsystem_kernel.dylib 0x00007fff6c1c8b96 kevent64 + 10
1 QtWebEngineCore 0x000000011463ae6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x000000011463acc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x00000001145c362b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x00000001145877cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x00000001145cea94 base::internal::ServiceThread::Run(base::RunLoop*) + 20
6 QtWebEngineCore 0x00000001145e2a7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x000000011462be07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff6c283109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff6c27eb8b thread_start + 15
Thread 5:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff6c1bfdfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6c1c0170 mach_msg + 60
2 QtWebEngineCore 0x0000000114630492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001145d8778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x00000001145d9150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x00000001145d8cd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x000000011462be07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff6c283109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff6c27eb8b thread_start + 15
Thread 6:: ThreadPoolBackgroundWorker
0 libsystem_kernel.dylib 0x00007fff6c1bfdfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6c1c0170 mach_msg + 60
2 QtWebEngineCore 0x0000000114630492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001145d8778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x00000001145d9150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x00000001145d8c44 base::internal::WorkerThread::RunBackgroundPooledWorker() + 20
6 QtWebEngineCore 0x000000011462be07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff6c283109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff6c27eb8b thread_start + 15
Thread 7:: Chrome_IOThread
0 libsystem_kernel.dylib 0x00007fff6c1c8b96 kevent64 + 10
1 QtWebEngineCore 0x000000011463ae6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x000000011463acc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x00000001145c362b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x00000001145877cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x0000000118507f06 content::BrowserProcessSubThread::IOThreadRun(base::RunLoop*) + 102
6 QtWebEngineCore 0x00000001145e2a7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x000000011462be07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff6c283109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff6c27eb8b thread_start + 15
Thread 8:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff6c1bfdfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6c1c0170 mach_msg + 60
2 QtWebEngineCore 0x0000000114630492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001146302cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001145581db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x00000001145c362b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x00000001145877cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x00000001145e2a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x000000011462be07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff6c283109 _pthread_start + 148
10 libsystem_pthread.dylib 0x00007fff6c27eb8b thread_start + 15
Thread 9:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff6c1bfdfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6c1c0170 mach_msg + 60
2 QtWebEngineCore 0x0000000114630492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001145d8778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x00000001145d9150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x00000001145d8cd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x000000011462be07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff6c283109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff6c27eb8b thread_start + 15
Thread 10:: CompositorTileWorker1
0 libsystem_kernel.dylib 0x00007fff6c1c2882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff6c283425 _pthread_cond_wait + 698
2 QtWebEngineCore 0x0000000114627e18 base::ConditionVariable::Wait() + 104
3 QtWebEngineCore 0x00000001158df5f8 non-virtual thunk to cc::SingleThreadTaskGraphRunner::Run() + 56
4 QtWebEngineCore 0x000000011462be07 base::(anonymous namespace)::ThreadFunc(void*) + 87
5 libsystem_pthread.dylib 0x00007fff6c283109 _pthread_start + 148
6 libsystem_pthread.dylib 0x00007fff6c27eb8b thread_start + 15
Thread 11:: Chrome_InProcGpuThread
0 libsystem_kernel.dylib 0x00007fff6c1bfdfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6c1c0170 mach_msg + 60
2 QtWebEngineCore 0x0000000114630492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011455820f base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 223
4 QtWebEngineCore 0x00000001145c362b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
5 QtWebEngineCore 0x00000001145877cb base::RunLoop::Run() + 395
6 QtWebEngineCore 0x00000001145e2a7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x000000011462be07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff6c283109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff6c27eb8b thread_start + 15
Thread 12:: Chrome_ChildIOThread
0 libsystem_kernel.dylib 0x00007fff6c1c8b96 kevent64 + 10
1 QtWebEngineCore 0x000000011463ae6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x000000011463acc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x00000001145c362b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x00000001145877cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x00000001145e2a7d base::Thread::ThreadMain() + 413
6 QtWebEngineCore 0x000000011462be07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff6c283109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff6c27eb8b thread_start + 15
Thread 13:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff6c1bfdfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6c1c0170 mach_msg + 60
2 QtWebEngineCore 0x0000000114630492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001146302cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001145581db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x00000001145c362b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x00000001145877cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x00000001145e2a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x000000011462be07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff6c283109 _pthread_start + 148
10 libsystem_pthread.dylib 0x00007fff6c27eb8b thread_start + 15
Thread 14:: VizCompositorThread
0 libsystem_kernel.dylib 0x00007fff6c1bfdfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6c1c0170 mach_msg + 60
2 QtWebEngineCore 0x0000000114630492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001146302cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001145581db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x00000001145c362b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x00000001145877cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x00000001145e2a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x000000011462be07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff6c283109 _pthread_start + 148
10 libsystem_pthread.dylib 0x00007fff6c27eb8b thread_start + 15
Thread 15:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff6c1bfdfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6c1c0170 mach_msg + 60
2 QtWebEngineCore 0x0000000114630492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001146302cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001145581db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x00000001145c362b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x00000001145877cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x00000001145e2a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x000000011462be07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff6c283109 _pthread_start + 148
10 libsystem_pthread.dylib 0x00007fff6c27eb8b thread_start + 15
Thread 16:: ThreadPoolSingleThreadForegroundBlocking0
0 libsystem_kernel.dylib 0x00007fff6c1bfdfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6c1c0170 mach_msg + 60
2 QtWebEngineCore 0x0000000114630492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001146302cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001145d876a base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 42
5 QtWebEngineCore 0x00000001145d9150 base::internal::WorkerThread::RunWorker() + 1024
6 QtWebEngineCore 0x00000001145d8d34 base::internal::WorkerThread::RunDedicatedWorker() + 20
7 QtWebEngineCore 0x000000011462be07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff6c283109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff6c27eb8b thread_start + 15
Thread 17:: MemoryInfra
0 libsystem_kernel.dylib 0x00007fff6c1bfdfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6c1c0170 mach_msg + 60
2 QtWebEngineCore 0x0000000114630492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001146302cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001145581db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x00000001145c362b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x00000001145877cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x00000001145e2a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x000000011462be07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff6c283109 _pthread_start + 148
10 libsystem_pthread.dylib 0x00007fff6c27eb8b thread_start + 15
Thread 18:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff6c1bfdfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6c1c0170 mach_msg + 60
2 QtWebEngineCore 0x0000000114630492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001146302cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001145581db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x00000001145c362b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x00000001145877cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x00000001145e2a7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x000000011462be07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff6c283109 _pthread_start + 148
10 libsystem_pthread.dylib 0x00007fff6c27eb8b thread_start + 15
Thread 19:: com.apple.NSEventThread
0 libsystem_kernel.dylib 0x00007fff6c1bfdfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6c1c0170 mach_msg + 60
2 com.apple.CoreFoundation 0x00007fff31fbe985 __CFRunLoopServiceMachPort + 247
3 com.apple.CoreFoundation 0x00007fff31fbd452 __CFRunLoopRun + 1319
4 com.apple.CoreFoundation 0x00007fff31fbc8ce CFRunLoopRunSpecific + 462
5 com.apple.AppKit 0x00007fff2f3d0f74 _NSEventThread + 132
6 libsystem_pthread.dylib 0x00007fff6c283109 _pthread_start + 148
7 libsystem_pthread.dylib 0x00007fff6c27eb8b thread_start + 15
Thread 20:: ThreadPoolSingleThreadSharedBackgroundBlocking1
0 libsystem_kernel.dylib 0x00007fff6c1bfdfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6c1c0170 mach_msg + 60
2 QtWebEngineCore 0x0000000114630492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001146302cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001145d876a base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 42
5 QtWebEngineCore 0x00000001145d8e3d base::internal::WorkerThread::RunWorker() + 237
6 QtWebEngineCore 0x00000001145d8c74 base::internal::WorkerThread::RunBackgroundSharedWorker() + 20
7 QtWebEngineCore 0x000000011462be07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff6c283109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff6c27eb8b thread_start + 15
Thread 21:
0 libsystem_pthread.dylib 0x00007fff6c27eb68 start_wqthread + 0
Thread 22:
0 libsystem_pthread.dylib 0x00007fff6c27eb68 start_wqthread + 0
Thread 23:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff6c1bfdfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6c1c0170 mach_msg + 60
2 QtWebEngineCore 0x0000000114630492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001145d8778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x00000001145d8e3d base::internal::WorkerThread::RunWorker() + 237
5 QtWebEngineCore 0x00000001145d8cd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x000000011462be07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff6c283109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff6c27eb8b thread_start + 15
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x000000010b2a8dc0 rcx: 0x00007ffa1cf4da58 rdx: 0x0000000000000000
rdi: 0x0000000000000307 rsi: 0x000000000000000b rbp: 0x00007ffa1cf4da80 rsp: 0x00007ffa1cf4da58
r8: 0x00007ffa1cf4df48 r9: 0xd0f6b8127c6582f1 r10: 0x000000010b2a8dc0 r11: 0x0000000000000246
r12: 0x0000000000000307 r13: 0x00007ffa27e7a810 r14: 0x000000000000000b r15: 0x0000000000000016
rip: 0x00007fff6c1c633a rfl: 0x0000000000000246 cr2: 0x000000010d98aad1
Logical CPU: 0
Error Code: 0x02000148
Trap Number: 133
Binary Images:
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0x7fff5dc6b000 - 0x7fff5dc84ffb com.apple.ProtocolBuffer (1 - 274.24.9.16.3) /System/Library/PrivateFrameworks/ProtocolBuffer.framework/Versions/A/ProtocolBuffer
0x7fff5dd96000 - 0x7fff5dd99ff4 com.apple.QuickLookNonBaseSystem (1.0 - 1) /System/Library/PrivateFrameworks/QuickLookNonBaseSystem.framework/Versions/A/QuickLookNonBaseSystem
0x7fff5dd9a000 - 0x7fff5ddbdff0 com.apple.quicklook.QuickLookSupport (1.0 - 1) /System/Library/PrivateFrameworks/QuickLookSupport.framework/Versions/A/QuickLookSupport
0x7fff5de04000 - 0x7fff5de7dff3 com.apple.Rapport (1.9.5 - 195.2) /System/Library/PrivateFrameworks/Rapport.framework/Versions/A/Rapport
0x7fff5e0e4000 - 0x7fff5e10dff1 com.apple.RemoteViewServices (2.0 - 148) /System/Library/PrivateFrameworks/RemoteViewServices.framework/Versions/A/RemoteViewServices
0x7fff5e272000 - 0x7fff5e2adff0 com.apple.RunningBoardServices (1.0 - 223.140.2) /System/Library/PrivateFrameworks/RunningBoardServices.framework/Versions/A/RunningBoardServices
0x7fff5fb8e000 - 0x7fff5fb91ff5 com.apple.SecCodeWrapper (4.0 - 448.100.6) /System/Library/PrivateFrameworks/SecCodeWrapper.framework/Versions/A/SecCodeWrapper
0x7fff5fd04000 - 0x7fff5fe2bfff com.apple.Sharing (1526.37 - 1526.37) /System/Library/PrivateFrameworks/Sharing.framework/Versions/A/Sharing
0x7fff5fea3000 - 0x7fff5fec3ff5 com.apple.sidecar-core (1.0 - 209.40.4) /System/Library/PrivateFrameworks/SidecarCore.framework/Versions/A/SidecarCore
0x7fff5fec4000 - 0x7fff5fed6ff0 com.apple.sidecar-ui (1.0 - 209.40.4) /System/Library/PrivateFrameworks/SidecarUI.framework/Versions/A/SidecarUI
0x7fff61240000 - 0x7fff61536fff com.apple.SkyLight (1.600.0 - 451.6) /System/Library/PrivateFrameworks/SkyLight.framework/Versions/A/SkyLight
0x7fff61d83000 - 0x7fff61d91ffb com.apple.SpeechRecognitionCore (6.0.91.2 - 6.0.91.2) /System/Library/PrivateFrameworks/SpeechRecognitionCore.framework/Versions/A/SpeechRecognitionCore
0x7fff6246d000 - 0x7fff624aeff9 com.apple.StreamingZip (1.0 - 1) /System/Library/PrivateFrameworks/StreamingZip.framework/Versions/A/StreamingZip
0x7fff625c5000 - 0x7fff625ceff7 com.apple.SymptomDiagnosticReporter (1.0 - 1238.120.2) /System/Library/PrivateFrameworks/SymptomDiagnosticReporter.framework/Versions/A/SymptomDiagnosticReporter
0x7fff6263f000 - 0x7fff62669ffe com.apple.framework.SystemAdministration (1.0 - 1.0) /System/Library/PrivateFrameworks/SystemAdministration.framework/Versions/A/SystemAdministration
0x7fff62885000 - 0x7fff62895ff3 com.apple.TCC (1.0 - 1) /System/Library/PrivateFrameworks/TCC.framework/Versions/A/TCC
0x7fff62dba000 - 0x7fff62e80ff0 com.apple.TextureIO (3.10.9 - 3.10.9) /System/Library/PrivateFrameworks/TextureIO.framework/Versions/A/TextureIO
0x7fff63017000 - 0x7fff63018fff com.apple.TrustEvaluationAgent (2.0 - 33) /System/Library/PrivateFrameworks/TrustEvaluationAgent.framework/Versions/A/TrustEvaluationAgent
0x7fff63050000 - 0x7fff632a8ff0 com.apple.UIFoundation (1.0 - 662) /System/Library/PrivateFrameworks/UIFoundation.framework/Versions/A/UIFoundation
0x7fff6333f000 - 0x7fff63345ffe com.apple.URLFormatting (119 - 119.18) /System/Library/PrivateFrameworks/URLFormatting.framework/Versions/A/URLFormatting
0x7fff63f45000 - 0x7fff63f65ffc com.apple.UserManagement (1.0 - 1) /System/Library/PrivateFrameworks/UserManagement.framework/Versions/A/UserManagement
0x7fff64d11000 - 0x7fff64dfcff2 com.apple.ViewBridge (468 - 468) /System/Library/PrivateFrameworks/ViewBridge.framework/Versions/A/ViewBridge
0x7fff64fa2000 - 0x7fff64fa3fff com.apple.WatchdogClient.framework (1.0 - 67.120.2) /System/Library/PrivateFrameworks/WatchdogClient.framework/Versions/A/WatchdogClient
0x7fff65bd3000 - 0x7fff65bd6ffa com.apple.dt.XCTTargetBootstrap (1.0 - 16091) /System/Library/PrivateFrameworks/XCTTargetBootstrap.framework/Versions/A/XCTTargetBootstrap
0x7fff65c50000 - 0x7fff65c5eff5 com.apple.audio.caulk (1.0 - 32.3) /System/Library/PrivateFrameworks/caulk.framework/Versions/A/caulk
0x7fff65fa0000 - 0x7fff65fa2ff3 com.apple.loginsupport (1.0 - 1) /System/Library/PrivateFrameworks/login.framework/Versions/A/Frameworks/loginsupport.framework/Versions/A/loginsupport
0x7fff65fa3000 - 0x7fff65fb6ffd com.apple.login (3.0 - 3.0) /System/Library/PrivateFrameworks/login.framework/Versions/A/login
0x7fff65fe8000 - 0x7fff65ff4ffd com.apple.perfdata (1.0 - 51.100.6) /System/Library/PrivateFrameworks/perfdata.framework/Versions/A/perfdata
0x7fff68a79000 - 0x7fff68a85ff9 libAudioStatistics.dylib (1104.100) /usr/lib/libAudioStatistics.dylib
0x7fff68a86000 - 0x7fff68ab9ffa libAudioToolboxUtility.dylib (1104.100) /usr/lib/libAudioToolboxUtility.dylib
0x7fff68ac0000 - 0x7fff68af4fff libCRFSuite.dylib (48) /usr/lib/libCRFSuite.dylib
0x7fff68af7000 - 0x7fff68b01fff libChineseTokenizer.dylib (34) /usr/lib/libChineseTokenizer.dylib
0x7fff68b02000 - 0x7fff68b8afff libCoreStorage.dylib (551.0.1) /usr/lib/libCoreStorage.dylib
0x7fff68b8d000 - 0x7fff68b8fff7 libDiagnosticMessagesClient.dylib (112) /usr/lib/libDiagnosticMessagesClient.dylib
0x7fff68bd5000 - 0x7fff68d8cffb libFosl_dynamic.dylib (100.4) /usr/lib/libFosl_dynamic.dylib
0x7fff68db3000 - 0x7fff68db9ff3 libIOReport.dylib (54) /usr/lib/libIOReport.dylib
0x7fff68e9b000 - 0x7fff68ea2fff libMatch.1.dylib (36) /usr/lib/libMatch.1.dylib
0x7fff68ed1000 - 0x7fff68ef1ff7 libMobileGestalt.dylib (826.140.5) /usr/lib/libMobileGestalt.dylib
0x7fff68f71000 - 0x7fff6904eff7 libSMC.dylib (20) /usr/lib/libSMC.dylib
0x7fff69063000 - 0x7fff69064fff libSystem.B.dylib (1281.100.1) /usr/lib/libSystem.B.dylib
0x7fff69065000 - 0x7fff690f0ff7 libTelephonyUtilDynamic.dylib (5017.1) /usr/lib/libTelephonyUtilDynamic.dylib
0x7fff690f1000 - 0x7fff690f2fff libThaiTokenizer.dylib (3) /usr/lib/libThaiTokenizer.dylib
0x7fff6910a000 - 0x7fff69120fff libapple_nghttp2.dylib (1.39.2) /usr/lib/libapple_nghttp2.dylib
0x7fff69155000 - 0x7fff691c7ff7 libarchive.2.dylib (72.140.2) /usr/lib/libarchive.2.dylib
0x7fff691c8000 - 0x7fff69261fe5 libate.dylib (3.0.1) /usr/lib/libate.dylib
0x7fff69265000 - 0x7fff69265ff3 libauto.dylib (187) /usr/lib/libauto.dylib
0x7fff69266000 - 0x7fff6932affe libboringssl.dylib (283.120.1) /usr/lib/libboringssl.dylib
0x7fff6932b000 - 0x7fff6933bffb libbsm.0.dylib (60.100.1) /usr/lib/libbsm.0.dylib
0x7fff6933c000 - 0x7fff69348fff libbz2.1.0.dylib (44) /usr/lib/libbz2.1.0.dylib
0x7fff69349000 - 0x7fff6939bfff libc++.1.dylib (902.1) /usr/lib/libc++.1.dylib
0x7fff6939c000 - 0x7fff693b1ffb libc++abi.dylib (902) /usr/lib/libc++abi.dylib
0x7fff693b2000 - 0x7fff693b2fff libcharset.1.dylib (59) /usr/lib/libcharset.1.dylib
0x7fff693b3000 - 0x7fff693c4fff libcmph.dylib (8) /usr/lib/libcmph.dylib
0x7fff693c5000 - 0x7fff693dcfd7 libcompression.dylib (87.1) /usr/lib/libcompression.dylib
0x7fff696b6000 - 0x7fff696ccff7 libcoretls.dylib (167) /usr/lib/libcoretls.dylib
0x7fff696cd000 - 0x7fff696cefff libcoretls_cfhelpers.dylib (167) /usr/lib/libcoretls_cfhelpers.dylib
0x7fff69b71000 - 0x7fff69c75fef libcrypto.44.dylib (47.140.1) /usr/lib/libcrypto.44.dylib
0x7fff69c78000 - 0x7fff69c83fff libcsfde.dylib (551.0.1) /usr/lib/libcsfde.dylib
0x7fff69c8b000 - 0x7fff69ceaff7 libcups.2.dylib (483.7) /usr/lib/libcups.2.dylib
0x7fff69cec000 - 0x7fff69d51ff7 libcurl.4.dylib (118.120.5) /usr/lib/libcurl.4.dylib
0x7fff69df4000 - 0x7fff69df4fff libenergytrace.dylib (21) /usr/lib/libenergytrace.dylib
0x7fff69df5000 - 0x7fff69e0dfff libexpat.1.dylib (19.60.2) /usr/lib/libexpat.1.dylib
0x7fff69e1b000 - 0x7fff69e1dfff libfakelink.dylib (149.1) /usr/lib/libfakelink.dylib
0x7fff69e1e000 - 0x7fff69e23f57 libffi.dylib (26) /usr/lib/libffi.dylib
0x7fff69e2c000 - 0x7fff69e31fff libgermantok.dylib (24) /usr/lib/libgermantok.dylib
0x7fff69e32000 - 0x7fff69e3bff7 libheimdal-asn1.dylib (564.140.7) /usr/lib/libheimdal-asn1.dylib
0x7fff69e3c000 - 0x7fff69f2cfff libiconv.2.dylib (59) /usr/lib/libiconv.2.dylib
0x7fff69f2d000 - 0x7fff6a184fff libicucore.A.dylib (64260.0.1) /usr/lib/libicucore.A.dylib
0x7fff6a19e000 - 0x7fff6a19ffff liblangid.dylib (133) /usr/lib/liblangid.dylib
0x7fff6a1a0000 - 0x7fff6a1b8ff3 liblzma.5.dylib (16) /usr/lib/liblzma.5.dylib
0x7fff6a1d0000 - 0x7fff6a277ff7 libmecab.dylib (883.11) /usr/lib/libmecab.dylib
0x7fff6a278000 - 0x7fff6a4daff1 libmecabra.dylib (883.11) /usr/lib/libmecabra.dylib
0x7fff6a847000 - 0x7fff6a876fff libncurses.5.4.dylib (57) /usr/lib/libncurses.5.4.dylib
0x7fff6a9a6000 - 0x7fff6ae22ff5 libnetwork.dylib (1880.120.4) /usr/lib/libnetwork.dylib
0x7fff6ae23000 - 0x7fff6ae3afff libnetworkextension.dylib (1095.140.2) /usr/lib/libnetworkextension.dylib
0x7fff6aec3000 - 0x7fff6aef6fde libobjc.A.dylib (787.1) /usr/lib/libobjc.A.dylib
0x7fff6aef7000 - 0x7fff6aef8ff7 libodfde.dylib (26) /usr/lib/libodfde.dylib
0x7fff6af09000 - 0x7fff6af0dfff libpam.2.dylib (25.100.1) /usr/lib/libpam.2.dylib
0x7fff6af10000 - 0x7fff6af46fff libpcap.A.dylib (89.120.2) /usr/lib/libpcap.A.dylib
0x7fff6af86000 - 0x7fff6af94ff9 libperfcheck.dylib (37.100.2) /usr/lib/libperfcheck.dylib
0x7fff6af95000 - 0x7fff6af98ff3 libpmenergy.dylib (214.120.2) /usr/lib/libpmenergy.dylib
0x7fff6af99000 - 0x7fff6af9bfff libpmsample.dylib (214.120.2) /usr/lib/libpmsample.dylib
0x7fff6afca000 - 0x7fff6afe2fff libresolv.9.dylib (67.40.1) /usr/lib/libresolv.9.dylib
0x7fff6afe4000 - 0x7fff6b028ff7 libsandbox.1.dylib (1217.141.3) /usr/lib/libsandbox.1.dylib
0x7fff6b029000 - 0x7fff6b03bff7 libsasl2.2.dylib (213.120.1) /usr/lib/libsasl2.2.dylib
0x7fff6b03c000 - 0x7fff6b03dff7 libspindump.dylib (281.3) /usr/lib/libspindump.dylib
0x7fff6b03e000 - 0x7fff6b228ff7 libsqlite3.dylib (308.6) /usr/lib/libsqlite3.dylib
0x7fff6b31c000 - 0x7fff6b349ffb libssl.46.dylib (47.140.1) /usr/lib/libssl.46.dylib
0x7fff6b41e000 - 0x7fff6b478ff8 libusrtcp.dylib (1880.120.4) /usr/lib/libusrtcp.dylib
0x7fff6b479000 - 0x7fff6b47cffb libutil.dylib (57) /usr/lib/libutil.dylib
0x7fff6b47d000 - 0x7fff6b48aff7 libxar.1.dylib (425.2) /usr/lib/libxar.1.dylib
0x7fff6b490000 - 0x7fff6b572fff libxml2.2.dylib (33.9) /usr/lib/libxml2.2.dylib
0x7fff6b576000 - 0x7fff6b59efff libxslt.1.dylib (16.12) /usr/lib/libxslt.1.dylib
0x7fff6b59f000 - 0x7fff6b5b1ff3 libz.1.dylib (76) /usr/lib/libz.1.dylib
0x7fff6be60000 - 0x7fff6be65ff3 libcache.dylib (83) /usr/lib/system/libcache.dylib
0x7fff6be66000 - 0x7fff6be71fff libcommonCrypto.dylib (60165.120.1) /usr/lib/system/libcommonCrypto.dylib
0x7fff6be72000 - 0x7fff6be79fff libcompiler_rt.dylib (101.2) /usr/lib/system/libcompiler_rt.dylib
0x7fff6be7a000 - 0x7fff6be83ff7 libcopyfile.dylib (166.40.1) /usr/lib/system/libcopyfile.dylib
0x7fff6be84000 - 0x7fff6bf16fdb libcorecrypto.dylib (866.140.2) /usr/lib/system/libcorecrypto.dylib
0x7fff6c023000 - 0x7fff6c063ff0 libdispatch.dylib (1173.100.2) /usr/lib/system/libdispatch.dylib
0x7fff6c064000 - 0x7fff6c09afff libdyld.dylib (750.7) /usr/lib/system/libdyld.dylib
0x7fff6c09b000 - 0x7fff6c09bffb libkeymgr.dylib (30) /usr/lib/system/libkeymgr.dylib
0x7fff6c09c000 - 0x7fff6c0a8ff3 libkxld.dylib (6153.141.35) /usr/lib/system/libkxld.dylib
0x7fff6c0a9000 - 0x7fff6c0a9ff7 liblaunch.dylib (1738.140.3) /usr/lib/system/liblaunch.dylib
0x7fff6c0aa000 - 0x7fff6c0afff7 libmacho.dylib (959.0.1) /usr/lib/system/libmacho.dylib
0x7fff6c0b0000 - 0x7fff6c0b2ff3 libquarantine.dylib (110.40.3) /usr/lib/system/libquarantine.dylib
0x7fff6c0b3000 - 0x7fff6c0b4ff7 libremovefile.dylib (48) /usr/lib/system/libremovefile.dylib
0x7fff6c0b5000 - 0x7fff6c0ccff3 libsystem_asl.dylib (377.60.2) /usr/lib/system/libsystem_asl.dylib
0x7fff6c0cd000 - 0x7fff6c0cdff7 libsystem_blocks.dylib (74) /usr/lib/system/libsystem_blocks.dylib
0x7fff6c0ce000 - 0x7fff6c155fff libsystem_c.dylib (1353.100.4) /usr/lib/system/libsystem_c.dylib
0x7fff6c156000 - 0x7fff6c159ffb libsystem_configuration.dylib (1061.141.2) /usr/lib/system/libsystem_configuration.dylib
0x7fff6c15a000 - 0x7fff6c15dfff libsystem_coreservices.dylib (114.1) /usr/lib/system/libsystem_coreservices.dylib
0x7fff6c15e000 - 0x7fff6c166fff libsystem_darwin.dylib (1353.100.4) /usr/lib/system/libsystem_darwin.dylib
0x7fff6c167000 - 0x7fff6c16efff libsystem_dnssd.dylib (1096.100.3) /usr/lib/system/libsystem_dnssd.dylib
0x7fff6c16f000 - 0x7fff6c170ffb libsystem_featureflags.dylib (17) /usr/lib/system/libsystem_featureflags.dylib
0x7fff6c171000 - 0x7fff6c1beff7 libsystem_info.dylib (538) /usr/lib/system/libsystem_info.dylib
0x7fff6c1bf000 - 0x7fff6c1ebff7 libsystem_kernel.dylib (6153.141.35) /usr/lib/system/libsystem_kernel.dylib
0x7fff6c1ec000 - 0x7fff6c233fff libsystem_m.dylib (3178) /usr/lib/system/libsystem_m.dylib
0x7fff6c234000 - 0x7fff6c25bfff libsystem_malloc.dylib (283.100.6) /usr/lib/system/libsystem_malloc.dylib
0x7fff6c25c000 - 0x7fff6c269ffb libsystem_networkextension.dylib (1095.140.2) /usr/lib/system/libsystem_networkextension.dylib
0x7fff6c26a000 - 0x7fff6c273ff7 libsystem_notify.dylib (241.100.2) /usr/lib/system/libsystem_notify.dylib
0x7fff6c274000 - 0x7fff6c27cfef libsystem_platform.dylib (220.100.1) /usr/lib/system/libsystem_platform.dylib
0x7fff6c27d000 - 0x7fff6c287fff libsystem_pthread.dylib (416.100.3) /usr/lib/system/libsystem_pthread.dylib
0x7fff6c288000 - 0x7fff6c28cff3 libsystem_sandbox.dylib (1217.141.3) /usr/lib/system/libsystem_sandbox.dylib
0x7fff6c28d000 - 0x7fff6c28ffff libsystem_secinit.dylib (62.100.2) /usr/lib/system/libsystem_secinit.dylib
0x7fff6c290000 - 0x7fff6c297ffb libsystem_symptoms.dylib (1238.120.2) /usr/lib/system/libsystem_symptoms.dylib
0x7fff6c298000 - 0x7fff6c2aeff2 libsystem_trace.dylib (1147.120.1) /usr/lib/system/libsystem_trace.dylib
0x7fff6c2b0000 - 0x7fff6c2b5ff7 libunwind.dylib (35.4) /usr/lib/system/libunwind.dylib
0x7fff6c2b6000 - 0x7fff6c2ebffe libxpc.dylib (1738.140.3) /usr/lib/system/libxpc.dylib
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 2
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 366979
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=1.0G resident=0K(0%) swapped_out_or_unallocated=1.0G(100%)
Writable regions: Total=1.1G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=1.1G(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 256K 2
Activity Tracing 256K 1
CG backing stores 992K 2
CG image 128K 13
CoreAnimation 160K 16
CoreGraphics 8K 1
CoreImage 24K 2
CoreServices 228K 1
CoreUI image data 2952K 24
Foundation 4K 1
Kernel Alloc Once 8K 1
MALLOC 535.9M 630
MALLOC guard page 32K 8
MALLOC_LARGE (reserved) 384K 1 reserved VM address space (unallocated)
MALLOC_NANO (reserved) 256.0M 1 reserved VM address space (unallocated)
Mach message 24K 2
OpenGL GLSL 384K 4
STACK GUARD 92K 23
Stack 147.2M 24
Stack Guard 56.0M 1
VM_ALLOCATE 124.7M 137
VM_ALLOCATE (reserved) 32.0M 1 reserved VM address space (unallocated)
__DATA 52.4M 555
__DATA_CONST 40K 4
__FONT_DATA 4K 1
__GLSLBUILTINS 5176K 1
__LINKEDIT 481.5M 151
__OBJC_RO 32.3M 1
__OBJC_RW 1908K 2
__TEXT 526.4M 521
__UNICODE 564K 1
mapped file 399.5M 56
shared memory 2844K 25
=========== ======= =======
TOTAL 2.6G 2214
TOTAL, minus reserved VM space 2.3G 2214
===== Log before crash start =====
> open /Users/meng/Desktop/startup.cxc
> alias reset view orient; view initial
> alias start tool show $1
> alias whereprefs info path user unversioned config
> alias captut open help:user/tutorials/binding-sites.html#cap-example
> alias previewts toolshed url https://cxtoolshed-
> preview.rbvi.ucsf.edu;toolshed reload available
> alias normalts toolshed url https://cxtoolshed.rbvi.ucsf.edu;toolshed reload
> available
> alias btut open
> https://www.cgl.ucsf.edu/home/meng/chimerax/vdocs/user/tutorials/binding-
> sites.html
> alias stut open https://www.rbvi.ucsf.edu/chimerax/data/conservation-
> coloring/conservation-coloring.html
executed startup.cxc
UCSF ChimeraX version: 1.3.dev202108221453 (2021-08-22)
© 2016-2021 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open 2mnr
2mnr title:
Mechanism of the reaction catalyzed by mandelate racemase. 2. Crystal
structure of mandelate racemase At 2.5 angstroms resolution: identification of
the active site and possible catalytic residues [more info...]
Chain information for 2mnr #1
---
Chain | Description | UniProt
A | mandelate racemase | MANR_PSEPU
Non-standard residues in 2mnr #1
---
MN — manganese (II) ion
SO4 — sulfate ion
2mnr mmCIF Assemblies
---
1| author_and_software_defined_assembly
> open 3toy
3toy title:
CRYSTAL STRUCTURE OF ENOLASE BRADO_4202 (TARGET EFI-501651) FROM
Bradyrhizobium sp. ORS278 WITH CALCIUM AND ACETATE BOUND [more info...]
Chain information for 3toy #2
---
Chain | Description | UniProt
A B C D | Mandelate racemase/muconate lactonizing enzyme family protein |
A4YVM8_BRASO
Non-standard residues in 3toy #2
---
ACT — acetate ion
CA — calcium ion
NI — nickel (II) ion
P4C — O-acetaldehydyl-hexaethylene glycol (polyethylene 400)
3toy mmCIF Assemblies
---
1| author_and_software_defined_assembly
> delete ~ /a
> sequence chain #1/a
Alignment identifier is 1/A
> sequence associate #2/A 1/A:1
Associated 3toy chain A to chain A with 202 mismatches and/or gaps
> save mismatch1.cxs
> close #1
> save mismatch2.cxs
===== Log before crash end =====
Log:
> open /Users/meng/Desktop/startup.cxc
> alias reset view orient; view initial
> alias start tool show $1
> alias whereprefs info path user unversioned config
> alias captut open help:user/tutorials/binding-sites.html#cap-example
> alias previewts toolshed url https://cxtoolshed-
> preview.rbvi.ucsf.edu;toolshed reload available
> alias normalts toolshed url https://cxtoolshed.rbvi.ucsf.edu;toolshed reload
> available
> alias btut open
> https://www.cgl.ucsf.edu/home/meng/chimerax/vdocs/user/tutorials/binding-
> sites.html
> alias stut open https://www.rbvi.ucsf.edu/chimerax/data/conservation-
> coloring/conservation-coloring.html
executed startup.cxc
UCSF ChimeraX version: 1.3.dev202108221453 (2021-08-22)
© 2016-2021 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 INTEL-14.7.18
OpenGL renderer: Intel Iris Pro OpenGL Engine
OpenGL vendor: Intel Inc.Hardware:
Hardware Overview:
Model Name: MacBook Pro
Model Identifier: MacBookPro11,4
Processor Name: Quad-Core Intel Core i7
Processor Speed: 2.2 GHz
Number of Processors: 1
Total Number of Cores: 4
L2 Cache (per Core): 256 KB
L3 Cache: 6 MB
Hyper-Threading Technology: Enabled
Memory: 16 GB
Boot ROM Version: 427.140.8.0.0
SMC Version (system): 2.29f24
Software:
System Software Overview:
System Version: macOS 10.15.7 (19H1323)
Kernel Version: Darwin 19.6.0
Time since boot: 8:25
Graphics/Displays:
Intel Iris Pro:
Chipset Model: Intel Iris Pro
Type: GPU
Bus: Built-In
VRAM (Dynamic, Max): 1536 MB
Vendor: Intel
Device ID: 0x0d26
Revision ID: 0x0008
Metal: Supported, feature set macOS GPUFamily1 v4
Displays:
Color LCD:
Display Type: Built-In Retina LCD
Resolution: 2880 x 1800 Retina
Framebuffer Depth: 24-Bit Color (ARGB8888)
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: No
Connection Type: Internal
Locale: (None, 'UTF-8')
PyQt5 5.15.2, Qt 5.15.2
Installed Packages:
alabaster: 0.7.12
appdirs: 1.4.4
appnope: 0.1.2
Babel: 2.9.1
backcall: 0.2.0
blockdiag: 2.0.1
certifi: 2021.5.30
cftime: 1.5.0
chardet: 4.0.0
charset-normalizer: 2.0.4
ChimeraX-AddCharge: 1.1.4
ChimeraX-AddH: 2.1.10
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.2
ChimeraX-AlphaFold: 1.0
ChimeraX-AltlocExplorer: 1.0
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.28.1
ChimeraX-AtomicLibrary: 4.1.1
ChimeraX-AtomSearch: 2.0
ChimeraX-AtomSearchLibrary: 1.0
ChimeraX-AxesPlanes: 2.0
ChimeraX-BasicActions: 1.1
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.0
ChimeraX-BondRot: 2.0
ChimeraX-BugReporter: 1.0
ChimeraX-BuildStructure: 2.5.3
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.1
ChimeraX-ButtonPanel: 1.0
ChimeraX-CageBuilder: 1.0
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.1
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.1
ChimeraX-ColorActions: 1.0
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.4
ChimeraX-CommandLine: 1.1.5
ChimeraX-ConnectStructure: 2.0
ChimeraX-Contacts: 1.0
ChimeraX-Core: 1.3.dev202108221453
ChimeraX-CoreFormats: 1.1
ChimeraX-coulombic: 1.3
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0
ChimeraX-DataFormats: 1.2.1
ChimeraX-Dicom: 1.0
ChimeraX-DistMonitor: 1.1.4
ChimeraX-DistUI: 1.0
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0
ChimeraX-FunctionKey: 1.0
ChimeraX-Geometry: 1.1
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1
ChimeraX-Hbonds: 2.1.1
ChimeraX-Help: 1.2
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ItemsInspection: 1.0
ChimeraX-Label: 1.1
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.4
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.1
ChimeraX-Map: 1.1
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1
ChimeraX-Markers: 1.0
ChimeraX-Mask: 1.0
ChimeraX-MatchMaker: 2.0
ChimeraX-MDcrds: 2.5
ChimeraX-MedicalToolbar: 1.0.1
ChimeraX-Meeting: 1.0
ChimeraX-MLP: 1.1
ChimeraX-mmCIF: 2.4
ChimeraX-MMTF: 2.1
ChimeraX-Modeller: 1.1
ChimeraX-ModelPanel: 1.1
ChimeraX-ModelSeries: 1.0
ChimeraX-Mol2: 2.0
ChimeraX-Morph: 1.0
ChimeraX-MouseModes: 1.1
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0.2
ChimeraX-OpenCommand: 1.7
ChimeraX-PDB: 2.6
ChimeraX-PDBBio: 1.0
ChimeraX-PDBLibrary: 1.0.1
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.0.1
ChimeraX-PubChem: 2.1
ChimeraX-ReadPbonds: 1.0
ChimeraX-Registration: 1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-ResidueFit: 1.0
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.4.2
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0
ChimeraX-Shortcuts: 1.1
ChimeraX-ShowAttr: 1.0
ChimeraX-ShowSequences: 1.0
ChimeraX-SideView: 1.0
ChimeraX-Smiles: 2.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.6
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-Struts: 1.0
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0
ChimeraX-SwapRes: 2.1
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.1
ChimeraX-ToolshedUtils: 1.2
ChimeraX-Tug: 1.0
ChimeraX-UI: 1.11.1
ChimeraX-uniprot: 2.2
ChimeraX-UnitCell: 1.0
ChimeraX-ViewDockX: 1.0.1
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0
ChimeraX-WebServices: 1.0
ChimeraX-Zone: 1.0
colorama: 0.4.4
comtypes: 1.1.10
cxservices: 1.0.1
cycler: 0.10.0
Cython: 0.29.23
decorator: 5.0.9
distlib: 0.3.1
docutils: 0.17.1
filelock: 3.0.12
funcparserlib: 0.3.6
grako: 3.16.5
h5py: 3.4.0
html2text: 2020.1.16
idna: 2.10
ihm: 0.20
imagecodecs: 2021.4.28
imagesize: 1.2.0
ipykernel: 5.5.5
ipython: 7.23.1
ipython-genutils: 0.2.0
jedi: 0.18.0
Jinja2: 2.11.3
jupyter-client: 6.1.12
jupyter-core: 4.7.1
kiwisolver: 1.3.1
lxml: 4.6.3
lz4: 3.1.3
MarkupSafe: 1.1.1
matplotlib: 3.4.2
matplotlib-inline: 0.1.2
msgpack: 1.0.2
netCDF4: 1.5.6
networkx: 2.6.2
numexpr: 2.7.3
numpy: 1.21.0
numpydoc: 1.1.0
openvr: 1.16.801
packaging: 21.0
ParmEd: 3.2.0
parso: 0.8.2
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 8.2.0
pip: 21.1.1
pkginfo: 1.7.0
prompt-toolkit: 3.0.20
psutil: 5.8.0
ptyprocess: 0.7.0
pycollada: 0.7.1
pydicom: 2.1.2
Pygments: 2.9.0
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 2.4.7
PyQt5-commercial: 5.15.2
PyQt5-sip: 12.8.1
PyQtWebEngine-commercial: 5.15.2
python-dateutil: 2.8.1
pytz: 2021.1
pyzmq: 22.2.1
qtconsole: 5.1.0
QtPy: 1.10.0
RandomWords: 0.3.0
requests: 2.25.1
scipy: 1.6.3
setuptools: 57.0.0
sfftk-rw: 0.7.0.post1
six: 1.16.0
snowballstemmer: 2.1.0
sortedcontainers: 2.4.0
Sphinx: 4.0.1
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 2.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 2.0.0
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.5
suds-jurko: 0.6
tifffile: 2021.4.8
tinyarray: 1.2.3
tornado: 6.1
traitlets: 5.0.5
urllib3: 1.26.6
wcwidth: 0.2.5
webcolors: 1.11.1
wheel: 0.36.2
wheel-filename: 1.3.0
File attachment: mismatch1.cxs
Attachments (1)
Change History (3)
by , 4 years ago
| Attachment: | mismatch1.cxs added |
|---|
comment:1 by , 4 years ago
| Component: | Unassigned → Sequence |
|---|---|
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → accepted |
| Summary: | ChimeraX bug report submission → Crash in sseq.structure |
comment:2 by , 4 years ago
| Resolution: | → fixed |
|---|---|
| Status: | accepted → closed |
The "structure sequence" wasn't being properly demoted to plain "sequence" when 2mnr was closed.
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