![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 4 years ago
Closed 4 years ago
#5064 closed defect (can't reproduce)
Crash in garbage collection during new-object allocation
| Reported by: | Owned by: | pett | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Core | Version: | |
| Keywords: | Cc: | Tom Goddard | |
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: Darwin-18.7.0-x86_64-i386-64bit
ChimeraX Version: 1.1.1 (2020-10-07 08:32:49 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Process: ChimeraX [3031]
Path: /Applications/ChimeraX-1.1.1.app/Contents/MacOS/ChimeraX
Identifier: ChimeraX
Version: 1.1.1 (1.1.1.0)
Code Type: X86-64 (Native)
Parent Process: ??? [1]
Responsible: ChimeraX [3031]
User ID: 502
Date/Time: 2021-08-16 09:05:36.328 -0700
OS Version: Mac OS X 10.14.6 (18G103)
Report Version: 12
Bridge OS Version: 3.0 (14Y904)
Anonymous UUID: 813B3576-30C3-32D0-822B-1C073A44997C
Sleep/Wake UUID: 179844FB-E64A-4792-800F-1715C2C17046
Time Awake Since Boot: 360000 seconds
Time Since Wake: 2500 seconds
System Integrity Protection: enabled
Crashed Thread: 0 CrBrowserMain Dispatch queue: com.apple.main-thread
Exception Type: EXC_BAD_ACCESS (SIGSEGV)
Exception Codes: KERN_INVALID_ADDRESS at 0x00000000000000a9
Exception Note: EXC_CORPSE_NOTIFY
VM Regions Near 0xa9:
-->
__TEXT 000000010ecf2000-000000010ecf3000 [ 4K] r-x/r-x SM=COW /Applications/ChimeraX-1.1.1.app/Contents/MacOS/ChimeraX
Thread 0 Crashed:: CrBrowserMain Dispatch queue: com.apple.main-thread
0 libsystem_kernel.dylib 0x00007fff7c0702c6 __pthread_kill + 10
1 libsystem_pthread.dylib 0x00007fff7c12bbf1 pthread_kill + 284
2 libsystem_c.dylib 0x00007fff7bf8dd8a raise + 26
3 libsystem_platform.dylib 0x00007fff7c120b5d _sigtramp + 29
4 ??? 000000000000000000 0 + 0
5 org.python.python 0x000000010ed6c980 tupletraverse + 64
6 org.python.python 0x000000010ee529a3 collect + 2083
7 org.python.python 0x000000010ee5314e _PyObject_GC_Alloc + 286
8 org.python.python 0x000000010ee53224 _PyObject_GC_New + 20
9 org.python.python 0x000000010ed6cb4c tuple_iter + 60
10 org.python.python 0x000000010ed0c068 PyObject_GetIter + 24
11 org.python.python 0x000000010edf2e1f _PyEval_EvalFrameDefault + 24015
12 org.python.python 0x000000010edf7a2c _PyEval_EvalCodeWithName + 3276
13 org.python.python 0x000000010ed21377 _PyFunction_FastCallDict + 455
14 org.python.python 0x000000010ed236eb object_vacall + 619
15 org.python.python 0x000000010ed237dd _PyObject_CallMethodIdObjArgs + 173
16 org.python.python 0x000000010ee170c1 PyImport_ImportModuleLevelObject + 2017
17 org.python.python 0x000000010edf1fce _PyEval_EvalFrameDefault + 20350
18 org.python.python 0x000000010ed21d61 function_code_fastcall + 177
19 org.python.python 0x000000010edf6bd4 call_function + 772
20 org.python.python 0x000000010edf38ae _PyEval_EvalFrameDefault + 26718
21 org.python.python 0x000000010edf7a2c _PyEval_EvalCodeWithName + 3276
22 org.python.python 0x000000010ed21879 _PyFunction_FastCallKeywords + 217
23 org.python.python 0x000000010edf6bd4 call_function + 772
24 org.python.python 0x000000010edf38ae _PyEval_EvalFrameDefault + 26718
25 org.python.python 0x000000010ed21d61 function_code_fastcall + 177
26 org.python.python 0x000000010edf6bd4 call_function + 772
27 org.python.python 0x000000010edf38ae _PyEval_EvalFrameDefault + 26718
28 org.python.python 0x000000010edf7a2c _PyEval_EvalCodeWithName + 3276
29 org.python.python 0x000000010ed21377 _PyFunction_FastCallDict + 455
30 org.python.python 0x000000010ed29ca0 property_descr_get + 160
31 org.python.python 0x000000010ed5eebb _PyObject_GenericGetAttrWithDict + 171
32 org.python.python 0x000000010ed74bf2 slot_tp_getattr_hook + 450
33 org.python.python 0x000000010edf1bee _PyEval_EvalFrameDefault + 19358
34 org.python.python 0x000000010edf7a2c _PyEval_EvalCodeWithName + 3276
35 org.python.python 0x000000010ed21879 _PyFunction_FastCallKeywords + 217
36 org.python.python 0x000000010edf6bd4 call_function + 772
37 org.python.python 0x000000010edf38ae _PyEval_EvalFrameDefault + 26718
38 org.python.python 0x000000010edf7a2c _PyEval_EvalCodeWithName + 3276
39 org.python.python 0x000000010ed21879 _PyFunction_FastCallKeywords + 217
40 org.python.python 0x000000010edf6bd4 call_function + 772
41 org.python.python 0x000000010edf38ae _PyEval_EvalFrameDefault + 26718
42 org.python.python 0x000000010edf7a2c _PyEval_EvalCodeWithName + 3276
43 org.python.python 0x000000010ed21377 _PyFunction_FastCallDict + 455
44 org.python.python 0x000000010edf3a3a _PyEval_EvalFrameDefault + 27114
45 org.python.python 0x000000010edf7a2c _PyEval_EvalCodeWithName + 3276
46 org.python.python 0x000000010ed21879 _PyFunction_FastCallKeywords + 217
47 org.python.python 0x000000010edf6bd4 call_function + 772
48 org.python.python 0x000000010eded5c4 _PyEval_EvalFrameDefault + 1396
49 org.python.python 0x000000010edf7a2c _PyEval_EvalCodeWithName + 3276
50 org.python.python 0x000000010ed21879 _PyFunction_FastCallKeywords + 217
51 org.python.python 0x000000010edf6bd4 call_function + 772
52 org.python.python 0x000000010edf38ae _PyEval_EvalFrameDefault + 26718
53 org.python.python 0x000000010ed21d61 function_code_fastcall + 177
54 org.python.python 0x000000010ed22873 _PyObject_Call_Prepend + 131
55 org.python.python 0x000000010ed219d8 PyObject_Call + 136
56 QtCore.so 0x000000011d331f17 PyQtSlot::call(_object*, _object*) const + 39
57 QtCore.so 0x000000011d331e26 PyQtSlot::invoke(void**, _object*, void*, bool) const + 374
58 QtCore.so 0x000000011d332925 PyQtSlotProxy::unislot(void**) + 85
59 QtCore.so 0x000000011d33289a PyQtSlotProxy::qt_metacall(QMetaObject::Call, int, void**) + 58
60 QtCore 0x000000011ce0413d QMetaObject::activate(QObject*, int, int, void**) + 1773
61 QtWidgets 0x000000011c27b68c 0x11c0d7000 + 1721996
62 QtCore 0x000000011ce0468c QMetaObject::activate(QObject*, int, int, void**) + 3132
63 QtWidgets 0x000000011c1d1e2f 0x11c0d7000 + 1027631
64 QtWidgets 0x000000011c1d1ccc 0x11c0d7000 + 1027276
65 QtWidgets 0x000000011c1d2dff QAbstractButton::mouseReleaseEvent(QMouseEvent*) + 271
66 QtWidgets 0x000000011c1233bd QWidget::event(QEvent*) + 445
67 QtWidgets 0x000000011c0e767d QApplicationPrivate::notify_helper(QObject*, QEvent*) + 269
68 QtWidgets 0x000000011c0ea4d8 QApplication::notify(QObject*, QEvent*) + 7336
69 QtWidgets.so 0x000000011bca73ca sipQApplication::notify(QObject*, QEvent*) + 234
70 QtCore 0x000000011cdd3324 QCoreApplication::notifyInternal2(QObject*, QEvent*) + 212
71 QtWidgets 0x000000011c0e7fa0 QApplicationPrivate::sendMouseEvent(QWidget*, QMouseEvent*, QWidget*, QWidget*, QWidget**, QPointer&, bool, bool) + 896
72 QtWidgets 0x000000011c14290e 0x11c0d7000 + 440590
73 QtWidgets 0x000000011c1415c9 0x11c0d7000 + 435657
74 QtWidgets 0x000000011c0e767d QApplicationPrivate::notify_helper(QObject*, QEvent*) + 269
75 QtWidgets 0x000000011c0e8a82 QApplication::notify(QObject*, QEvent*) + 594
76 QtWidgets.so 0x000000011bca73ca sipQApplication::notify(QObject*, QEvent*) + 234
77 QtCore 0x000000011cdd3324 QCoreApplication::notifyInternal2(QObject*, QEvent*) + 212
78 QtGui 0x000000011c6bc779 QGuiApplicationPrivate::processMouseEvent(QWindowSystemInterfacePrivate::MouseEvent*) + 3961
79 QtGui 0x000000011c6a346b QWindowSystemInterface::sendWindowSystemEvents(QFlags) + 219
80 libqcocoa.dylib 0x0000000126a85900 0x126a4f000 + 223488
81 libqcocoa.dylib 0x0000000126a86068 0x126a4f000 + 225384
82 com.apple.CoreFoundation 0x00007fff4ffd7de3 __CFRUNLOOP_IS_CALLING_OUT_TO_A_SOURCE0_PERFORM_FUNCTION__ + 17
83 com.apple.CoreFoundation 0x00007fff4ffd7d89 __CFRunLoopDoSource0 + 108
84 com.apple.CoreFoundation 0x00007fff4ffbb74b __CFRunLoopDoSources0 + 195
85 com.apple.CoreFoundation 0x00007fff4ffbad15 __CFRunLoopRun + 1189
86 com.apple.CoreFoundation 0x00007fff4ffba61e CFRunLoopRunSpecific + 455
87 com.apple.HIToolbox 0x00007fff4f2191ab RunCurrentEventLoopInMode + 292
88 com.apple.HIToolbox 0x00007fff4f218ded ReceiveNextEventCommon + 355
89 com.apple.HIToolbox 0x00007fff4f218c76 _BlockUntilNextEventMatchingListInModeWithFilter + 64
90 com.apple.AppKit 0x00007fff4d5b177d _DPSNextEvent + 1135
91 com.apple.AppKit 0x00007fff4d5b046b -[NSApplication(NSEvent) _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 1361
92 com.apple.AppKit 0x00007fff4d5aa588 -[NSApplication run] + 699
93 libqcocoa.dylib 0x0000000126a84de3 0x126a4f000 + 220643
94 QtCore 0x000000011cdce93f QEventLoop::exec(QFlags) + 431
95 QtCore 0x000000011cdd3932 QCoreApplication::exec() + 130
96 QtWidgets.so 0x000000011bd967d2 meth_QApplication_exec_(_object*, _object*) + 82
97 org.python.python 0x000000010ed22382 _PyMethodDef_RawFastCallKeywords + 226
98 org.python.python 0x000000010ed218b9 _PyCFunction_FastCallKeywords + 41
99 org.python.python 0x000000010edf6b60 call_function + 656
100 org.python.python 0x000000010edf3817 _PyEval_EvalFrameDefault + 26567
101 org.python.python 0x000000010ed21d61 function_code_fastcall + 177
102 org.python.python 0x000000010edf6bd4 call_function + 772
103 org.python.python 0x000000010edf3817 _PyEval_EvalFrameDefault + 26567
104 org.python.python 0x000000010edf7a2c _PyEval_EvalCodeWithName + 3276
105 org.python.python 0x000000010ed21879 _PyFunction_FastCallKeywords + 217
106 org.python.python 0x000000010edf6bd4 call_function + 772
107 org.python.python 0x000000010edf38ae _PyEval_EvalFrameDefault + 26718
108 org.python.python 0x000000010edf7a2c _PyEval_EvalCodeWithName + 3276
109 org.python.python 0x000000010edecfb0 PyEval_EvalCode + 48
110 org.python.python 0x000000010edea547 builtin_exec + 583
111 org.python.python 0x000000010ed2252d _PyMethodDef_RawFastCallKeywords + 653
112 org.python.python 0x000000010ed218b9 _PyCFunction_FastCallKeywords + 41
113 org.python.python 0x000000010edf6b60 call_function + 656
114 org.python.python 0x000000010edf38ae _PyEval_EvalFrameDefault + 26718
115 org.python.python 0x000000010edf7a2c _PyEval_EvalCodeWithName + 3276
116 org.python.python 0x000000010ed21879 _PyFunction_FastCallKeywords + 217
117 org.python.python 0x000000010edf6bd4 call_function + 772
118 org.python.python 0x000000010edf38ae _PyEval_EvalFrameDefault + 26718
119 org.python.python 0x000000010edf7a2c _PyEval_EvalCodeWithName + 3276
120 org.python.python 0x000000010ed21377 _PyFunction_FastCallDict + 455
121 org.python.python 0x000000010ee51af3 pymain_run_module + 147
122 org.python.python 0x000000010ee50bdc pymain_main + 5900
123 org.python.python 0x000000010ee4f4c3 Py_Main + 51
124 edu.ucsf.cgl.ChimeraX 0x000000010ecf2dc8 main + 120
125 libdyld.dylib 0x00007fff7bf353d5 start + 1
Thread 1:
0 libsystem_kernel.dylib 0x00007fff7c06d86a __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff7c12c56e _pthread_cond_wait + 722
2 libopenblasp-r0.3.7.dylib 0x0000000110901c3b blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff7c1292eb _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff7c12c249 _pthread_start + 66
5 libsystem_pthread.dylib 0x00007fff7c12840d thread_start + 13
Thread 2:
0 libsystem_kernel.dylib 0x00007fff7c06d86a __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff7c12c56e _pthread_cond_wait + 722
2 libopenblasp-r0.3.7.dylib 0x0000000110901c3b blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff7c1292eb _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff7c12c249 _pthread_start + 66
5 libsystem_pthread.dylib 0x00007fff7c12840d thread_start + 13
Thread 3:
0 libsystem_kernel.dylib 0x00007fff7c06d86a __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff7c12c56e _pthread_cond_wait + 722
2 libopenblasp-r0.3.7.dylib 0x0000000110901c3b blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff7c1292eb _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff7c12c249 _pthread_start + 66
5 libsystem_pthread.dylib 0x00007fff7c12840d thread_start + 13
Thread 4:: com.apple.NSEventThread
0 libsystem_kernel.dylib 0x00007fff7c06a22a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7c06a76c mach_msg + 60
2 com.apple.CoreFoundation 0x00007fff4ffbb94e __CFRunLoopServiceMachPort + 328
3 com.apple.CoreFoundation 0x00007fff4ffbaebc __CFRunLoopRun + 1612
4 com.apple.CoreFoundation 0x00007fff4ffba61e CFRunLoopRunSpecific + 455
5 com.apple.AppKit 0x00007fff4d5b94a2 _NSEventThread + 175
6 libsystem_pthread.dylib 0x00007fff7c1292eb _pthread_body + 126
7 libsystem_pthread.dylib 0x00007fff7c12c249 _pthread_start + 66
8 libsystem_pthread.dylib 0x00007fff7c12840d thread_start + 13
Thread 5:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff7c06a22a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7c06a76c mach_msg + 60
2 QtWebEngineCore 0x000000011fc0832d 0x11da66000 + 35267373
3 QtWebEngineCore 0x000000011fc0822f 0x11da66000 + 35267119
4 QtWebEngineCore 0x000000011fbbc05d 0x11da66000 + 34955357
5 QtWebEngineCore 0x000000011fbe5085 0x11da66000 + 35123333
6 QtWebEngineCore 0x000000011fc379bc 0x11da66000 + 35461564
7 QtWebEngineCore 0x000000011fc77717 0x11da66000 + 35723031
8 libsystem_pthread.dylib 0x00007fff7c1292eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff7c12c249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff7c12840d thread_start + 13
Thread 6:: DnsConfigService
0 libsystem_kernel.dylib 0x00007fff7c07078e kevent + 10
1 QtWebEngineCore 0x000000011fec99a9 0x11da66000 + 38156713
2 QtWebEngineCore 0x000000011fec6cbd 0x11da66000 + 38145213
3 QtWebEngineCore 0x000000011fc7dcdc 0x11da66000 + 35749084
4 QtWebEngineCore 0x000000011fbe5085 0x11da66000 + 35123333
5 QtWebEngineCore 0x000000011fc379bc 0x11da66000 + 35461564
6 QtWebEngineCore 0x000000011fc77717 0x11da66000 + 35723031
7 libsystem_pthread.dylib 0x00007fff7c1292eb _pthread_body + 126
8 libsystem_pthread.dylib 0x00007fff7c12c249 _pthread_start + 66
9 libsystem_pthread.dylib 0x00007fff7c12840d thread_start + 13
Thread 7:: TaskSchedulerServiceThread
0 libsystem_kernel.dylib 0x00007fff7c07078e kevent + 10
1 QtWebEngineCore 0x000000011fec99a9 0x11da66000 + 38156713
2 QtWebEngineCore 0x000000011fec6cbd 0x11da66000 + 38145213
3 QtWebEngineCore 0x000000011fc7dcc4 0x11da66000 + 35749060
4 QtWebEngineCore 0x000000011fbe5085 0x11da66000 + 35123333
5 QtWebEngineCore 0x000000011fc26a74 0x11da66000 + 35392116
6 QtWebEngineCore 0x000000011fc379bc 0x11da66000 + 35461564
7 QtWebEngineCore 0x000000011fc77717 0x11da66000 + 35723031
8 libsystem_pthread.dylib 0x00007fff7c1292eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff7c12c249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff7c12840d thread_start + 13
Thread 8:: TaskSchedulerForegroundWorker
0 libsystem_kernel.dylib 0x00007fff7c06a22a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7c06a76c mach_msg + 60
2 QtWebEngineCore 0x000000011fc0832d 0x11da66000 + 35267373
3 QtWebEngineCore 0x000000011fc08421 0x11da66000 + 35267617
4 QtWebEngineCore 0x000000011fc1fd28 0x11da66000 + 35364136
5 QtWebEngineCore 0x000000011fc2065b 0x11da66000 + 35366491
6 QtWebEngineCore 0x000000011fc202c4 0x11da66000 + 35365572
7 QtWebEngineCore 0x000000011fc77717 0x11da66000 + 35723031
8 libsystem_pthread.dylib 0x00007fff7c1292eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff7c12c249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff7c12840d thread_start + 13
Thread 9:: TaskSchedulerBackgroundWorker
0 libsystem_kernel.dylib 0x00007fff7c06a22a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7c06a76c mach_msg + 60
2 QtWebEngineCore 0x000000011fc0832d 0x11da66000 + 35267373
3 QtWebEngineCore 0x000000011fc08421 0x11da66000 + 35267617
4 QtWebEngineCore 0x000000011fc1fd28 0x11da66000 + 35364136
5 QtWebEngineCore 0x000000011fc2065b 0x11da66000 + 35366491
6 QtWebEngineCore 0x000000011fc20234 0x11da66000 + 35365428
7 QtWebEngineCore 0x000000011fc77717 0x11da66000 + 35723031
8 libsystem_pthread.dylib 0x00007fff7c1292eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff7c12c249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff7c12840d thread_start + 13
Thread 10:: TaskSchedulerBackgroundBlockingWorker
0 libsystem_kernel.dylib 0x00007fff7c06a22a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7c06a76c mach_msg + 60
2 QtWebEngineCore 0x000000011fc0832d 0x11da66000 + 35267373
3 QtWebEngineCore 0x000000011fc08421 0x11da66000 + 35267617
4 QtWebEngineCore 0x000000011fc1fd28 0x11da66000 + 35364136
5 QtWebEngineCore 0x000000011fc2065b 0x11da66000 + 35366491
6 QtWebEngineCore 0x000000011fc20234 0x11da66000 + 35365428
7 QtWebEngineCore 0x000000011fc77717 0x11da66000 + 35723031
8 libsystem_pthread.dylib 0x00007fff7c1292eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff7c12c249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff7c12840d thread_start + 13
Thread 11:: Chrome_IOThread
0 libsystem_kernel.dylib 0x00007fff7c07078e kevent + 10
1 QtWebEngineCore 0x000000011fec99a9 0x11da66000 + 38156713
2 QtWebEngineCore 0x000000011fec6cbd 0x11da66000 + 38145213
3 QtWebEngineCore 0x000000011fc7dcc4 0x11da66000 + 35749060
4 QtWebEngineCore 0x000000011fbe5085 0x11da66000 + 35123333
5 QtWebEngineCore 0x000000011f553fe4 0x11da66000 + 28237796
6 QtWebEngineCore 0x000000011fc379bc 0x11da66000 + 35461564
7 QtWebEngineCore 0x000000011fc77717 0x11da66000 + 35723031
8 libsystem_pthread.dylib 0x00007fff7c1292eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff7c12c249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff7c12840d thread_start + 13
Thread 12:: TaskSchedulerSingleThreadSharedBackgroundBlocking0
0 libsystem_kernel.dylib 0x00007fff7c06a22a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7c06a76c mach_msg + 60
2 QtWebEngineCore 0x000000011fc0832d 0x11da66000 + 35267373
3 QtWebEngineCore 0x000000011fc0822f 0x11da66000 + 35267119
4 QtWebEngineCore 0x000000011fc1fd1a 0x11da66000 + 35364122
5 QtWebEngineCore 0x000000011fc203bf 0x11da66000 + 35365823
6 QtWebEngineCore 0x000000011fc20264 0x11da66000 + 35365476
7 QtWebEngineCore 0x000000011fc77717 0x11da66000 + 35723031
8 libsystem_pthread.dylib 0x00007fff7c1292eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff7c12c249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff7c12840d thread_start + 13
Thread 13:: CompositorTileWorker1/68355
0 libsystem_kernel.dylib 0x00007fff7c06d86a __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff7c12c56e _pthread_cond_wait + 722
2 QtWebEngineCore 0x000000011fc75fa8 0x11da66000 + 35717032
3 QtWebEngineCore 0x0000000120bfc4c8 0x11da66000 + 51995848
4 QtWebEngineCore 0x000000011fc36694 0x11da66000 + 35456660
5 QtWebEngineCore 0x000000011fc77717 0x11da66000 + 35723031
6 libsystem_pthread.dylib 0x00007fff7c1292eb _pthread_body + 126
7 libsystem_pthread.dylib 0x00007fff7c12c249 _pthread_start + 66
8 libsystem_pthread.dylib 0x00007fff7c12840d thread_start + 13
Thread 14:: AudioThread
0 libsystem_kernel.dylib 0x00007fff7c06a22a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7c06a76c mach_msg + 60
2 QtWebEngineCore 0x000000011fc0832d 0x11da66000 + 35267373
3 QtWebEngineCore 0x000000011fc0822f 0x11da66000 + 35267119
4 QtWebEngineCore 0x000000011fbbc05d 0x11da66000 + 34955357
5 QtWebEngineCore 0x000000011fbe5085 0x11da66000 + 35123333
6 QtWebEngineCore 0x000000011fc379bc 0x11da66000 + 35461564
7 QtWebEngineCore 0x000000011fc77717 0x11da66000 + 35723031
8 libsystem_pthread.dylib 0x00007fff7c1292eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff7c12c249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff7c12840d thread_start + 13
Thread 15:: Chrome_InProcGpuThread
0 libsystem_kernel.dylib 0x00007fff7c06a22a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7c06a76c mach_msg + 60
2 QtWebEngineCore 0x000000011fc0832d 0x11da66000 + 35267373
3 QtWebEngineCore 0x000000011fbbc052 0x11da66000 + 34955346
4 QtWebEngineCore 0x000000011fbe5085 0x11da66000 + 35123333
5 QtWebEngineCore 0x000000011fc379bc 0x11da66000 + 35461564
6 QtWebEngineCore 0x000000011fc77717 0x11da66000 + 35723031
7 libsystem_pthread.dylib 0x00007fff7c1292eb _pthread_body + 126
8 libsystem_pthread.dylib 0x00007fff7c12c249 _pthread_start + 66
9 libsystem_pthread.dylib 0x00007fff7c12840d thread_start + 13
Thread 16:: Chrome_ChildIOThread
0 libsystem_kernel.dylib 0x00007fff7c07078e kevent + 10
1 QtWebEngineCore 0x000000011fec99a9 0x11da66000 + 38156713
2 QtWebEngineCore 0x000000011fec6cbd 0x11da66000 + 38145213
3 QtWebEngineCore 0x000000011fc7dcdc 0x11da66000 + 35749084
4 QtWebEngineCore 0x000000011fbe5085 0x11da66000 + 35123333
5 QtWebEngineCore 0x000000011fc379bc 0x11da66000 + 35461564
6 QtWebEngineCore 0x000000011fc77717 0x11da66000 + 35723031
7 libsystem_pthread.dylib 0x00007fff7c1292eb _pthread_body + 126
8 libsystem_pthread.dylib 0x00007fff7c12c249 _pthread_start + 66
9 libsystem_pthread.dylib 0x00007fff7c12840d thread_start + 13
Thread 17:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff7c06a22a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7c06a76c mach_msg + 60
2 QtWebEngineCore 0x000000011fc0832d 0x11da66000 + 35267373
3 QtWebEngineCore 0x000000011fc0822f 0x11da66000 + 35267119
4 QtWebEngineCore 0x000000011fbbc05d 0x11da66000 + 34955357
5 QtWebEngineCore 0x000000011fbe5085 0x11da66000 + 35123333
6 QtWebEngineCore 0x000000011fc379bc 0x11da66000 + 35461564
7 QtWebEngineCore 0x000000011fc77717 0x11da66000 + 35723031
8 libsystem_pthread.dylib 0x00007fff7c1292eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff7c12c249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff7c12840d thread_start + 13
Thread 18:: TaskSchedulerSingleThreadForegroundBlocking1
0 libsystem_kernel.dylib 0x00007fff7c06a22a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7c06a76c mach_msg + 60
2 QtWebEngineCore 0x000000011fc0832d 0x11da66000 + 35267373
3 QtWebEngineCore 0x000000011fc0822f 0x11da66000 + 35267119
4 QtWebEngineCore 0x000000011fc1fd1a 0x11da66000 + 35364122
5 QtWebEngineCore 0x000000011fc2065b 0x11da66000 + 35366491
6 QtWebEngineCore 0x000000011fc20324 0x11da66000 + 35365668
7 QtWebEngineCore 0x000000011fc77717 0x11da66000 + 35723031
8 libsystem_pthread.dylib 0x00007fff7c1292eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff7c12c249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff7c12840d thread_start + 13
Thread 19:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff7c06a22a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7c06a76c mach_msg + 60
2 QtWebEngineCore 0x000000011fc0832d 0x11da66000 + 35267373
3 QtWebEngineCore 0x000000011fc0822f 0x11da66000 + 35267119
4 QtWebEngineCore 0x000000011fbbc05d 0x11da66000 + 34955357
5 QtWebEngineCore 0x000000011fbe5085 0x11da66000 + 35123333
6 QtWebEngineCore 0x000000011fc379bc 0x11da66000 + 35461564
7 QtWebEngineCore 0x000000011fc77717 0x11da66000 + 35723031
8 libsystem_pthread.dylib 0x00007fff7c1292eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff7c12c249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff7c12840d thread_start + 13
Thread 20:: TaskSchedulerForegroundBlockingWorker
0 libsystem_kernel.dylib 0x00007fff7c06a22a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7c06a76c mach_msg + 60
2 QtWebEngineCore 0x000000011fc0832d 0x11da66000 + 35267373
3 QtWebEngineCore 0x000000011fc08421 0x11da66000 + 35267617
4 QtWebEngineCore 0x000000011fc1fd28 0x11da66000 + 35364136
5 QtWebEngineCore 0x000000011fc2065b 0x11da66000 + 35366491
6 QtWebEngineCore 0x000000011fc202c4 0x11da66000 + 35365572
7 QtWebEngineCore 0x000000011fc77717 0x11da66000 + 35723031
8 libsystem_pthread.dylib 0x00007fff7c1292eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff7c12c249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff7c12840d thread_start + 13
Thread 21:
0 libsystem_pthread.dylib 0x00007fff7c1283f0 start_wqthread + 0
Thread 22:
0 libsystem_pthread.dylib 0x00007fff7c1283f0 start_wqthread + 0
Thread 23:
0 libsystem_pthread.dylib 0x00007fff7c1283f0 start_wqthread + 0
Thread 24:
0 libsystem_pthread.dylib 0x00007fff7c1283f0 start_wqthread + 0
Thread 25:
0 libsystem_pthread.dylib 0x00007fff7c1283f0 start_wqthread + 0
Thread 26:: TaskSchedulerForegroundWorker
0 libsystem_kernel.dylib 0x00007fff7c06a22a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7c06a76c mach_msg + 60
2 QtWebEngineCore 0x000000011fc0832d 0x11da66000 + 35267373
3 QtWebEngineCore 0x000000011fc08421 0x11da66000 + 35267617
4 QtWebEngineCore 0x000000011fc1fd28 0x11da66000 + 35364136
5 QtWebEngineCore 0x000000011fc203bf 0x11da66000 + 35365823
6 QtWebEngineCore 0x000000011fc202c4 0x11da66000 + 35365572
7 QtWebEngineCore 0x000000011fc77717 0x11da66000 + 35723031
8 libsystem_pthread.dylib 0x00007fff7c1292eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff7c12c249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff7c12840d thread_start + 13
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x000000010f7155c0 rcx: 0x000000010f1a7a48 rdx: 0x0000000000000000
rdi: 0x0000000000000307 rsi: 0x000000000000000b rbp: 0x000000010f1a7a80 rsp: 0x000000010f1a7a48
r8: 0x000000010f1a7f48 r9: 0x79d86f0bca070263 r10: 0x000000010f71566c r11: 0x0000000000000287
r12: 0x0000000000000307 r13: 0x0000000133af85d0 r14: 0x000000000000000b r15: 0x000000000000002d
rip: 0x00007fff7c0702c6 rfl: 0x0000000000000286 cr2: 0x000000010eefa7c8
Logical CPU: 0
Error Code: 0x02000148
Trap Number: 133
Binary Images:
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0x10fc21000 - 0x10fc2fff3 +_datetime.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_datetime.cpython-37m-darwin.so
0x10fc7f000 - 0x10fc7fff3 +_scproxy.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_scproxy.cpython-37m-darwin.so
0x10fc87000 - 0x10fcc5ff7 +_decimal.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_decimal.cpython-37m-darwin.so
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0x10fd6e000 - 0x10fd6fff3 +_queue.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_queue.cpython-37m-darwin.so
0x10fdf8000 - 0x10fdf9fff +lapack_lite.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numpy/linalg/lapack_lite.cpython-37m-darwin.so
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0x10ff1f000 - 0x10ff31fff +_pickle.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_pickle.cpython-37m-darwin.so
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0x11ab51000 - 0x11abd3fff +_generator.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numpy/random/_generator.cpython-37m-darwin.so
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0x11af56000 - 0x11af71ff7 +libz.1.2.11.dylib (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/PIL/.dylibs/libz.1.2.11.dylib
0x11af7b000 - 0x11b00afff +libtiff.5.dylib (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/PIL/.dylibs/libtiff.5.dylib
0x11b023000 - 0x11b03cff7 +libxcb.1.dylib (3) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/PIL/.dylibs/libxcb.1.dylib
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0x11b091000 - 0x11b092fff +libXau.6.dylib (7) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/PIL/.dylibs/libXau.6.dylib
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0x7fff5ac7b000 - 0x7fff5acd2fff com.apple.QuickLookFramework (5.0 - 775.6) /System/Library/Frameworks/QuickLook.framework/Versions/A/QuickLook
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0x7fff60d69000 - 0x7fff60dd6ff3 com.apple.BaseBoard (360.28 - 360.28) /System/Library/PrivateFrameworks/BaseBoard.framework/Versions/A/BaseBoard
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0x7fff7c01d000 - 0x7fff7c068ffb libsystem_info.dylib (517.200.9) /usr/lib/system/libsystem_info.dylib
0x7fff7c069000 - 0x7fff7c091ff7 libsystem_kernel.dylib (4903.271.2) /usr/lib/system/libsystem_kernel.dylib
0x7fff7c092000 - 0x7fff7c0ddff7 libsystem_m.dylib (3158.200.7) /usr/lib/system/libsystem_m.dylib
0x7fff7c0de000 - 0x7fff7c108fff libsystem_malloc.dylib (166.270.1) /usr/lib/system/libsystem_malloc.dylib
0x7fff7c109000 - 0x7fff7c113ff7 libsystem_networkextension.dylib (767.250.2) /usr/lib/system/libsystem_networkextension.dylib
0x7fff7c114000 - 0x7fff7c11bfff libsystem_notify.dylib (172.200.21) /usr/lib/system/libsystem_notify.dylib
0x7fff7c11c000 - 0x7fff7c125fef libsystem_platform.dylib (177.270.1) /usr/lib/system/libsystem_platform.dylib
0x7fff7c126000 - 0x7fff7c130ff7 libsystem_pthread.dylib (330.250.2) /usr/lib/system/libsystem_pthread.dylib
0x7fff7c131000 - 0x7fff7c134ff7 libsystem_sandbox.dylib (851.270.1) /usr/lib/system/libsystem_sandbox.dylib
0x7fff7c135000 - 0x7fff7c137ff3 libsystem_secinit.dylib (30.260.2) /usr/lib/system/libsystem_secinit.dylib
0x7fff7c138000 - 0x7fff7c13fff3 libsystem_symptoms.dylib (820.267.1) /usr/lib/system/libsystem_symptoms.dylib
0x7fff7c140000 - 0x7fff7c155fff libsystem_trace.dylib (906.260.1) /usr/lib/system/libsystem_trace.dylib
0x7fff7c157000 - 0x7fff7c15cffb libunwind.dylib (35.4) /usr/lib/system/libunwind.dylib
0x7fff7c15d000 - 0x7fff7c18cfff libxpc.dylib (1336.261.2) /usr/lib/system/libxpc.dylib
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 67033
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 38426613
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=723.5M resident=0K(0%) swapped_out_or_unallocated=723.5M(100%)
Writable regions: Total=1.5G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=1.5G(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 512K 4
Activity Tracing 256K 1
CG backing stores 6424K 13
CG image 5220K 30
CoreAnimation 308K 20
CoreGraphics 8K 1
CoreImage 48K 7
CoreUI image data 3060K 30
CoreUI image file 216K 5
Foundation 44K 2
Kernel Alloc Once 8K 1
MALLOC 949.8M 225
MALLOC guard page 32K 7
MALLOC_LARGE (reserved) 384K 1 reserved VM address space (unallocated)
MALLOC_NANO (reserved) 256.0M 1 reserved VM address space (unallocated)
Memory Tag 242 12K 1
OpenGL GLSL 512K 6
PROTECTED_MEMORY 4K 1
STACK GUARD 104K 26
Stack 148.7M 27
Stack Guard 56.0M 1
VM_ALLOCATE 153.3M 180
VM_ALLOCATE (reserved) 32.0M 1 reserved VM address space (unallocated)
__DATA 83.8M 477
__FONT_DATA 4K 1
__GLSLBUILTINS 5176K 1
__LINKEDIT 247.4M 139
__TEXT 476.1M 449
__UNICODE 564K 1
mapped file 75.4M 43
shared memory 948K 25
=========== ======= =======
TOTAL 2.4G 1727
TOTAL, minus reserved VM space 2.2G 1727
Log:
UCSF ChimeraX version: 1.1.1 (2020-10-07)
© 2016-2020 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 ATI-2.11.20
OpenGL renderer: AMD Radeon Pro 560 OpenGL Engine
OpenGL vendor: ATI Technologies Inc.Hardware:
Hardware Overview:
Model Name: MacBook Pro
Model Identifier: MacBookPro14,3
Processor Name: Intel Core i7
Processor Speed: 3.1 GHz
Number of Processors: 1
Total Number of Cores: 4
L2 Cache (per Core): 256 KB
L3 Cache: 8 MB
Hyper-Threading Technology: Enabled
Memory: 16 GB
Boot ROM Version: 198.71.1.0.0
SMC Version (system): 2.45f0
Software:
System Software Overview:
System Version: macOS 10.14.6 (18G103)
Kernel Version: Darwin 18.7.0
Time since boot: 13 days 3:25
Graphics/Displays:
Radeon Pro 560:
Chipset Model: Radeon Pro 560
Type: GPU
Bus: PCIe
PCIe Lane Width: x8
VRAM (Total): 4 GB
Vendor: AMD (0x1002)
Device ID: 0x67ef
Revision ID: 0x00c0
ROM Revision: 113-C980AJ-927
VBIOS Version: 113-C9801AU-A02
EFI Driver Version: 01.A0.927
Automatic Graphics Switching: Supported
gMux Version: 4.0.29 [3.2.8]
Metal: Supported, feature set macOS GPUFamily2 v1
Displays:
Color LCD:
Display Type: Built-In Retina LCD
Resolution: 2880 x 1800 Retina
Framebuffer Depth: 24-Bit Color (ARGB8888)
Main Display: Yes
Mirror: Off
Online: Yes
Rotation: Supported
Automatically Adjust Brightness: No
Intel HD Graphics 630:
Chipset Model: Intel HD Graphics 630
Type: GPU
Bus: Built-In
VRAM (Dynamic, Max): 1536 MB
Vendor: Intel
Device ID: 0x591b
Revision ID: 0x0004
Automatic Graphics Switching: Supported
gMux Version: 4.0.29 [3.2.8]
Metal: Supported, feature set macOS GPUFamily2 v1
PyQt version: 5.12.3
Compiled Qt version: 5.12.4
Runtime Qt version: 5.12.9
Installed Packages:
alabaster: 0.7.12
appdirs: 1.4.4
appnope: 0.1.0
Babel: 2.8.0
backcall: 0.2.0
blockdiag: 2.0.1
certifi: 2020.6.20
chardet: 3.0.4
ChimeraX-AddH: 2.1.1
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.1
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.6.1
ChimeraX-AtomSearch: 2.0
ChimeraX-AxesPlanes: 2.0
ChimeraX-BasicActions: 1.1
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 1.0.1
ChimeraX-BondRot: 2.0
ChimeraX-BugReporter: 1.0
ChimeraX-BuildStructure: 2.0
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.0
ChimeraX-ButtonPanel: 1.0
ChimeraX-CageBuilder: 1.0
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.1
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.0
ChimeraX-ColorActions: 1.0
ChimeraX-ColorGlobe: 1.0
ChimeraX-CommandLine: 1.1.3
ChimeraX-ConnectStructure: 2.0
ChimeraX-Contacts: 1.0
ChimeraX-Core: 1.1.1
ChimeraX-CoreFormats: 1.0
ChimeraX-coulombic: 1.0.1
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-DataFormats: 1.0
ChimeraX-Dicom: 1.0
ChimeraX-DistMonitor: 1.1
ChimeraX-DistUI: 1.0
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0
ChimeraX-FunctionKey: 1.0
ChimeraX-Geometry: 1.1
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.0
ChimeraX-Hbonds: 2.0
ChimeraX-Help: 1.0
ChimeraX-HKCage: 1.0
ChimeraX-IHM: 1.0
ChimeraX-ImageFormats: 1.0
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0
ChimeraX-Label: 1.0
ChimeraX-ListInfo: 1.0
ChimeraX-Log: 1.1.1
ChimeraX-LookingGlass: 1.1
ChimeraX-Map: 1.0.1
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.0
ChimeraX-Markers: 1.0
ChimeraX-Mask: 1.0
ChimeraX-MatchMaker: 1.1
ChimeraX-MDcrds: 2.0
ChimeraX-MedicalToolbar: 1.0.1
ChimeraX-Meeting: 1.0
ChimeraX-MLP: 1.0
ChimeraX-mmCIF: 2.2
ChimeraX-MMTF: 2.0
ChimeraX-Modeller: 1.0
ChimeraX-ModelPanel: 1.0
ChimeraX-ModelSeries: 1.0
ChimeraX-Mol2: 2.0
ChimeraX-Morph: 1.0
ChimeraX-MouseModes: 1.0
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0
ChimeraX-OpenCommand: 1.2.1
ChimeraX-PDB: 2.1
ChimeraX-PDBBio: 1.0
ChimeraX-PickBlobs: 1.0
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.0
ChimeraX-PubChem: 2.0
ChimeraX-Read-Pbonds: 1.0
ChimeraX-Registration: 1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-ResidueFit: 1.0
ChimeraX-RestServer: 1.0
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.2
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SeqView: 2.2
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0
ChimeraX-Shortcuts: 1.0
ChimeraX-ShowAttr: 1.0
ChimeraX-ShowSequences: 1.0
ChimeraX-SideView: 1.0
ChimeraX-Smiles: 2.0
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.0.4
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-Struts: 1.0
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0
ChimeraX-SwapRes: 2.0
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.0
ChimeraX-ToolshedUtils: 1.0
ChimeraX-Tug: 1.0
ChimeraX-UI: 1.2.3
ChimeraX-uniprot: 2.0
ChimeraX-ViewDockX: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0
ChimeraX-WebServices: 1.0
ChimeraX-Zone: 1.0
colorama: 0.4.3
comtypes: 1.1.7
cxservices: 1.0
cycler: 0.10.0
Cython: 0.29.20
decorator: 4.4.2
distlib: 0.3.1
docutils: 0.16
filelock: 3.0.12
funcparserlib: 0.3.6
grako: 3.16.5
h5py: 2.10.0
html2text: 2020.1.16
idna: 2.10
ihm: 0.16
imagecodecs: 2020.5.30
imagecodecs-lite: 2020.1.31
imagesize: 1.2.0
ipykernel: 5.3.0
ipython: 7.15.0
ipython-genutils: 0.2.0
jedi: 0.17.2
Jinja2: 2.11.2
jupyter-client: 6.1.3
jupyter-core: 4.6.3
kiwisolver: 1.2.0
line-profiler: 2.1.2
lxml: 4.5.1
MarkupSafe: 1.1.1
matplotlib: 3.2.1
msgpack: 1.0.0
netifaces: 0.10.9
networkx: 2.4
numexpr: 2.7.1
numpy: 1.18.5
numpydoc: 1.0.0
openvr: 1.12.501
packaging: 20.4
parso: 0.7.1
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 7.1.2
pip: 20.2.2
pkginfo: 1.5.0.1
prompt-toolkit: 3.0.7
psutil: 5.7.0
ptyprocess: 0.6.0
pycollada: 0.7.1
pydicom: 2.0.0
Pygments: 2.6.1
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 2.4.7
PyQt5-commercial: 5.12.3
PyQt5-sip: 4.19.19
PyQtWebEngine-commercial: 5.12.1
python-dateutil: 2.8.1
pytz: 2020.1
pyzmq: 19.0.2
qtconsole: 4.7.4
QtPy: 1.9.0
RandomWords: 0.3.0
requests: 2.24.0
scipy: 1.4.1
setuptools: 49.4.0
sfftk-rw: 0.6.6.dev0
six: 1.15.0
snowballstemmer: 2.0.0
sortedcontainers: 2.2.2
Sphinx: 3.1.1
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 2.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 1.0.3
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.4
suds-jurko: 0.6
tables: 3.6.1
tifffile: 2020.6.3
tinyarray: 1.2.2
tornado: 6.0.4
traitlets: 5.0.4
urllib3: 1.25.10
wcwidth: 0.2.5
webcolors: 1.11.1
wheel: 0.34.2
Change History (2)
comment:1 by , 4 years ago
| Cc: | added |
|---|---|
| Component: | Unassigned → Core |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → accepted |
| Summary: | ChimeraX bug report submission → Crash in garbage collection during new-object allocation |
comment:2 by , 4 years ago
| Resolution: | → can't reproduce |
|---|---|
| Status: | accepted → closed |
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